mRNA_12217 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|351275
Unique Name	mRNA_12217
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|351275 vs. uniprot
Match: A0A835YLY8_9STRA (Galactose-4-epimerase, UDP n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY8_9STRA)

HSP 1 Score: 840 bits (2170), Expect = 2.700e-306
Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 1

Query:    1 MVKQITAWAALSALVTLSPCAQAFARVLVTGGAGYIGSHTCLELIKAGEEVVVVDNLINAVEESLERVIQLTGCNRKQLQFRKVDLLDRKGLRKVFEEFKFDSCIHFAGLKAVGESVAKPLMYYRNNIEGTLNLVEAMREHGCKKLVFSSSATVYGTPEKLPLDEKSRVGPGITNPYGRTKYMIEEILRDEQVADPTWEILILRYFNPIGAHESGRIGEDPDGIPNNLMPFVAQVAVGRREFLAVFGDDYSTPDGTGVRDYIHVCDLAEGHVAALNKLRKGGVGCEAVNLGTGKGYSVFEVVKAMEAASGKKIPYKVVPRRAGDVEAMYADPSFAKQYLTWSATRGLKEMCEDTWRWQSKNPHGYAPVEAADAGTGGQDIVEIDADGGEVNMASLRNSRIVKEAGKHQSGSSSVAHELK 1257
            MVKQITAWAALSALVTLSPCAQAFARVLVTGGAGYIGSHTCLELIKAGEEVVVVDNLINAVEESLERVIQLTGCNRKQLQFRKVDLLDRKGLRKVFEEFKFDSCIHFAGLKAVGESVAKPLMYYRNNIEGTLNLVEAMREHGCKKLVFSSSATVYGTPEKLPLDEKSRVGPGITNPYGRTKYMIEEILRDEQVADPTWEILILRYFNPIGAHESGRIGEDPDGIPNNLMPFVAQVAVGRREFLAVFGDDYSTPDGTGVRDYIHVCDLAEGHVAALNKLRKGGVGCEAVNLGTGKGYSVFEVVKAMEAASGKKIPYKVVPRRAGDVEAMYADPSFAKQYLTWSATRGLKEMCEDTWRWQSKNPHGYAPVEAADAGTGGQDIVEIDADGGEVNMASLRNSRIVKEAGKHQSGSSSVAHELK
Sbjct:    1 MVKQITAWAALSALVTLSPCAQAFARVLVTGGAGYIGSHTCLELIKAGEEVVVVDNLINAVEESLERVIQLTGCNRKQLQFRKVDLLDRKGLRKVFEEFKFDSCIHFAGLKAVGESVAKPLMYYRNNIEGTLNLVEAMREHGCKKLVFSSSATVYGTPEKLPLDEKSRVGPGITNPYGRTKYMIEEILRDEQVADPTWEILILRYFNPIGAHESGRIGEDPDGIPNNLMPFVAQVAVGRREFLAVFGDDYSTPDGTGVRDYIHVCDLAEGHVAALNKLRKGGVGCEAVNLGTGKGYSVFEVVKAMEAASGKKIPYKVVPRRAGDVEAMYADPSFAKQYLTWSATRGLKEMCEDTWRWQSKNPHGYAPVEAADAGTGGQDIVEIDADGGEVNMASLRNSRIVKEAGKHQSGSSSVAHELK 419

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BLAST of jgi.p|Trimin1|351275 vs. uniprot
Match: D7FL43_ECTSI (UDP-glucose 4-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL43_ECTSI)

HSP 1 Score: 546 bits (1408), Expect = 5.240e-191
Identity = 267/344 (77.62%), Postives = 298/344 (86.63%), Query Frame = 1

Query:   73 ARVLVTGGAGYIGSHTCLELIKAGEEVVVVDNLINAVEESLERVIQLTGCNRKQLQFRKVDLLDRKGLRKVFEEFKFDSCIHFAGLKAVGESVAKPLMYYRNNIEGTLNLVEAMREH-GCKKLVFSSSATVYGTPEKLPLDEKSRVGPGITNPYGRTKYMIEEILRDEQVADPTWEILILRYFNPIGAHESGRIGEDPDGIPNNLMPFVAQVAVGRREFLAVFGDDYSTPDGTGVRDYIHVCDLAEGHVAALNKLRKGGVGCEAVNLGTGKGYSVFEVVKAMEAASGKKIPYK--VVPRRAGDVEAMYADPSFAKQYLTWSATRGLKEMCEDTWRWQSKNPHGY 1095
            ARVLVTGGAGYIGSHTC+ELIKAGE+VVVVD+L NAVEESL RV +LT C+  QL FRKV+LLD+  L  VF +++FDSC+HFAGLKAVGESVAKPL+YYRNNIEGTLNLVE M++  GC+KLVFSSSATVYG P+KLPLDE S VG GITNPYGRTKYMIEEILRD   +DP+W+IL+LRYFNPIGAHESGR+GEDP+GIPNNLMPFVAQV VGRREFL+VFGDDY TPDGTGVRDYIHV DLAEGHVAA+ KLR+   GC AVNLGTG GYSV +VVK ME A G  IPYK  V+PRRAGDVEAMYADPS AK  L W+A RGLK+MC DTWRWQS +P+GY
Sbjct:   34 ARVLVTGGAGYIGSHTCVELIKAGEKVVVVDDLSNAVEESLNRVRELTKCDDDQLVFRKVNLLDQPALESVFNDYEFDSCVHFAGLKAVGESVAKPLLYYRNNIEGTLNLVECMQKQPGCRKLVFSSSATVYGEPDKLPLDESSSVGVGITNPYGRTKYMIEEILRDMSKSDPSWDILLLRYFNPIGAHESGRMGEDPEGIPNNLMPFVAQVCVGRREFLSVFGDDYGTPDGTGVRDYIHVMDLAEGHVAAVRKLRESCTGCAAVNLGTGSGYSVMDVVKGMEEACGNPIPYKEQVMPRRAGDVEAMYADPSLAKSMLGWTAKRGLKDMCTDTWRWQSAHPNGY 377

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BLAST of jgi.p|Trimin1|351275 vs. uniprot
Match: A0A4D9CZK9_9STRA (UDP-glucose 4-epimerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZK9_9STRA)

HSP 1 Score: 486 bits (1252), Expect = 2.490e-167
Identity = 236/351 (67.24%), Postives = 283/351 (80.63%), Query Frame = 1

Query:   64 QAFA-RVLVTGGAGYIGSHTCLELIKAGEEVVVVDNLINAVEESLERVIQLTGCNRKQLQFRKVDLLDRKGLRKVFEEFKFDSCIHFAGLKAVGESVAKPLMYYRNNIEGTLNLVEAMREHGCKKLVFSSSATVYGTPEKLPLDEKSRVGPGITNPYGRTKYMIEEILRDEQVADPTWEILILRYFNPIGAHESGRIGEDPDGIPNNLMPFVAQVAVGRREFLAVFGDDYSTPDGTGVRDYIHVCDLAEGHVAALNKLRK----GG--VGCEAVNLGTGKGYSVFEVVKAMEAASGKKIPYKVVPRRAGDVEAMYADPSFAKQYLTWSATRGLKEMCEDTWRWQSKNPHGY 1095
            QAFA  +LVTGGAGYIGSHTC EL+KAG  +VVVDNL+N+ E+S+ERV ++TGC    L+FR +DLL+ +GL  +F+E+ FD+CIHFAGLKAVGESV++PL YY NNI GTLNL+E M ++ CK +VFSSSATVYG PEKLP+ E  R+    TNPYGRTK  IEE+LRD+  AD  W ILILRYFNPIGAHESGRIGEDP GIPNNLMPF+AQV VGRRE L+VFG DY TPDGTGVRDYIHV DLAEGHVAA++++ +    GG  +GC  VNLGTG+G SV E+VKAM   SGK+IP K+  RR GDV A+Y DP+FA ++L W ATRG+K+MC+DTWRWQS+NP GY
Sbjct:   12 QAFAGHILVTGGAGYIGSHTCCELLKAGRRIVVVDNLVNSCEDSVERVKEITGCASGALEFRNLDLLNLEGLDDLFKEYSFDACIHFAGLKAVGESVSQPLTYYHNNIVGTLNLLEVMNKYKCKNMVFSSSATVYGDPEKLPITEDQRLQA--TNPYGRTKLFIEEMLRDQHTADKDWSILILRYFNPIGAHESGRIGEDPLGIPNNLMPFLAQVCVGRREVLSVFGSDYPTPDGTGVRDYIHVVDLAEGHVAAVDRMMEARAEGGKSLGCVPVNLGTGRGVSVLELVKAMRETSGKEIPIKMTDRRPGDVAALYTDPAFANRFLKWQATRGVKDMCDDTWRWQSRNPFGY 360

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BLAST of jgi.p|Trimin1|351275 vs. uniprot
Match: A0A6V1XCR0_HETAK (UDP-glucose 4-epimerase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XCR0_HETAK)

HSP 1 Score: 484 bits (1246), Expect = 1.630e-166
Identity = 235/350 (67.14%), Postives = 274/350 (78.29%), Query Frame = 1

Query:   76 RVLVTGGAGYIGSHTCLELIKAGEEVVVVDNLINAVEESLERVIQLTGCNRKQLQFRKVDLLDRKGLRKVFEEFKFDSCIHFAGLKAVGESVAKPLMYYRNNIEGTLNLVEAMREHGCKKLVFSSSATVYGTPEKLPLDEKSRVGPGITNPYGRTKYMIEEILRDEQVADPTWEILILRYFNPIGAHESGRIGEDPDGIPNNLMPFVAQVAVGRREFLAVFGDDYSTPDGTGVRDYIHVCDLAEGHVAALNKLR-------KGGV--GCEAVNLGTGKGYSVFEVVKAMEAASGKKIPYKVVPRRAGDVEAMYADPSFAKQYLTWSATRGLKEMCEDTWRWQSKNPHGYA 1098
             +LVTGGAGYIGSHTC+EL+ AG++VVVVDNL N+ EESL RV ++T C    L FR VDLLDR  L KVF+EF FD+C+HFAGLKAVGESV  PL YYRNNIEGTLNL++ M+E GCK +VFSSSATVYG PE+LP+ E   +    TNPYGRTK  IEEILRD  V+DP+W I++LRYFNPIGAH SGRIGEDP GIPNNLMPF+AQV VGRRE L +FG+DY+TPDGTGVRDYIHV DLA GH AAL KLR       +GG    C A+NLGTG+G SV E+V  M+ A+G  IPYK+ PRR GDVE++Y DP+FA+ YL W A  G+ EMC DTWRWQS NP+GYA
Sbjct:   23 HILVTGGAGYIGSHTCVELLNAGKKVVVVDNLCNSDEESLRRVKEITSCKSSDLIFRNVDLLDRAALGKVFDEFTFDACVHFAGLKAVGESVQIPLSYYRNNIEGTLNLLDCMKEKGCKAIVFSSSATVYGDPERLPIAEDGTLRS--TNPYGRTKLFIEEILRDLHVSDPSWRIMLLRYFNPIGAHPSGRIGEDPKGIPNNLMPFIAQVCVGRREMLNIFGNDYNTPDGTGVRDYIHVVDLARGHTAALEKLRALAAAAGEGGEEGACVAINLGTGRGVSVLELVAGMQEATGGDIPYKIAPRRPGDVESLYCDPAFAESYLGWRAELGVAEMCADTWRWQSGNPNGYA 370

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BLAST of jgi.p|Trimin1|351275 vs. uniprot
Match: A0A7S2W7X1_9STRA (UDP-glucose 4-epimerase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W7X1_9STRA)

HSP 1 Score: 469 bits (1206), Expect = 9.660e-161
Identity = 227/352 (64.49%), Postives = 271/352 (76.99%), Query Frame = 1

Query:   79 VLVTGGAGYIGSHTCLELIKAGEEVVVVDNLINAVEESLERVIQLTGCNRKQLQFRKVDLLDRKGLRKVFEEFKFDSCIHFAGLKAVGESVAKPLMYYRNNIEGTLNLVEAMREHGCKKLVFSSSATVYGTPEKLPLDEKSRVGPGITNPYGRTKYMIEEILRDEQVADPTWEILILRYFNPIGAHESGRIGEDPDGIPNNLMPFVAQVAVGRREFLAVFGDDYSTPDGTGVRDYIHVCDLAEGHVAALNKLRKGGVGC-EAVNLGTGKGYSVFEVVKAMEAASGKKIPYKVVPRRAGDVEAMYADPSFAKQYLTWSATRGLKEMCEDTWRWQSKNPHGYAPVEAADAGTGG 1131
            +LVTGGAGYIGSHTCLEL++AG   VVVDNL N+ EE+L RV +L  C+   L+FR VD+ D   L KV +EF+ DSCIHFAGLKAVGESV +P+MYY NNI GT+ L++++ ++G +K VFSSSATVYG PE+LPL E  R+    TNPYGRTK  IE+ILRD  VAD TW I+ILRYFNPIGAHESGRIGEDP GIPNNLMPF++QV VGRR  L+VFG+DY TPDGTGVRDYIHV DLA GH+AAL+KL +   GC   VNLGTG+G SV ++VK ME A+GK IPY++V RR GD+   Y DPSFAK +L W ATRG +EMC DTW+WQ  NP+GY     + A T G
Sbjct:    2 ILVTGGAGYIGSHTCLELLEAGRRCVVVDNLCNSDEEALRRVRELAKCSSDALEFRHVDMRDEAALEKVLDEFRIDSCIHFAGLKAVGESVKQPVMYYENNIGGTVQLLKSLAKYGVRKFVFSSSATVYGDPEELPLKESCRLST--TNPYGRTKLFIEDILRDLAVADDTWRIIILRYFNPIGAHESGRIGEDPQGIPNNLMPFISQVCVGRRSELSVFGNDYGTPDGTGVRDYIHVVDLANGHLAALDKLDEDTDGCCVPVNLGTGRGISVLDLVKGMERATGKTIPYRIVDRRPGDIAECYCDPSFAKSFLNWKATRGTEEMCNDTWKWQQNNPNGYRAAADSKAATEG 351

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BLAST of jgi.p|Trimin1|351275 vs. uniprot
Match: A0A7S3KXG9_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KXG9_9STRA)

HSP 1 Score: 468 bits (1205), Expect = 1.060e-159
Identity = 233/351 (66.38%), Postives = 268/351 (76.35%), Query Frame = 1

Query:   46 TLSPCAQAFARVLVTGGAGYIGSHTCLELIKAGEEVVVVDNLINAVEESLERVIQLTGCNRKQLQFRKVDLLDRKGLRKVFEEFK-FDSCIHFAGLKAVGESVAKPLMYYRNNIEGTLNLVEAMREHGCKKLVFSSSATVYGTPEKLPLDEKSRVGPGITNPYGRTKYMIEEILRDEQVADPTWEILILRYFNPIGAHESGRIGEDPDGIPNNLMPFVAQVAVGRREFLAVFGDDYSTPDGTGVRDYIHVCDLAEGHVAALNKLRKGGVGCEAVNLGTGKGYSVFEVVKAMEAASGKKIPYKVVPRRAGDVEAMYADPSFAKQYLTWSATRGLKEMCEDTWRWQSKNPHGY 1095
            TL+  + A   VLVTGGAGYIGSHTCLEL+     VVVVDNL N+ EESL RV +LT C   +L FR  D+ DRKGL K+ ++F    SCIHFAGLKAVGESVAKPLMYY  NI GT++L+E + +HG K  VFSSSATVYG PE LP+ E +++    TNPYGRTK  IEEILRD   AD TW  LILRYFNPIGAH SG IGEDP GIPNNLMPF+AQV VGRRE L+VFGDDY TPDGTGVRDYIHV DLA+GHVAAL+ L    VGC AVNLGTGKG SV E+VK M  A+G  +PY++ PRR GDV ++YADP+ A++ L W AT G+KEMCEDTW WQS NP+GY
Sbjct:   53 TLALASPAPRTVLVTGGAGYIGSHTCLELLSENYNVVVVDNLDNSSEESLRRVRKLTSCGEDRLCFRNCDIRDRKGLEKILKDFPDISSCIHFAGLKAVGESVAKPLMYYDCNISGTVHLLELLSKHGVKNFVFSSSATVYGDPEMLPVTEAAKLSA--TNPYGRTKLFIEEILRDCYAADETWNTLILRYFNPIGAHPSGEIGEDPQGIPNNLMPFIAQVCVGRREKLSVFGDDYDTPDGTGVRDYIHVVDLAKGHVAALDTLYNQKVGCRAVNLGTGKGVSVLELVKGMGEATGTPVPYEIAPRRPGDVASVYADPTLAEKLLGWKATLGVKEMCEDTWNWQSNNPYGY 401

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BLAST of jgi.p|Trimin1|351275 vs. uniprot
Match: M1VE42_CYAM1 (UDP-glucose 4-epimerase n=2 Tax=cellular organisms TaxID=131567 RepID=M1VE42_CYAM1)

HSP 1 Score: 457 bits (1176), Expect = 3.660e-156
Identity = 225/346 (65.03%), Postives = 270/346 (78.03%), Query Frame = 1

Query:   76 RVLVTGGAGYIGSHTCLELIKAGEEVVVVDNLINAVEESLERVIQLTGCNRKQLQFRKVDLLDRKGL-RKVFEEFKFDSCIHFAGLKAVGESVAKPLMYYRNNIEGTLNLVEAMREHGCKKLVFSSSATVYGTPEKLPLDEKSRVGPGITNPYGRTKYMIEEILRDEQVADP---TWEILILRYFNPIGAHESGRIGEDPDGIPNNLMPFVAQVAVGRREFLAVFGDDYSTPDGTGVRDYIHVCDLAEGHVAALNKLRK--GGVGCEAVNLGTGKGYSVFEVVKAMEAASGKKIPYKVVPRRAGDVEAMYADPSFAKQYLTWSATRGLKEMCEDTWRWQSKNPHGY 1095
            R+LVTGGAGYIGSHT +EL+++G +VVV+DNL N+ EE+L RV +LTG + ++LQF+ VDL D   L   V +     +CIHFAGLKAVGESV +PL YYRNN+ GTLNL++++  HGC++ VFSSSATVYG  EK+P+ E S +G   TNPYG+TK  IEE LRD   +      W ILILRYFNP+GAH SGRIGEDP GIPNNLMPF+AQVAVGRREFL+V+G+DY TPDGTGVRDYIHV DLA+GHVAAL KL K    VGC AVNLGTG+GYSV E+VKA E ASG++IPYK+V RR GD   +YADPSFAK +L W A  G+ EMC  TW+WQS+NPHGY
Sbjct:    6 RILVTGGAGYIGSHTVVELLESGYDVVVLDNLSNSSEEALRRVRELTGASEQRLQFQAVDLTDGVALDAAVAKSAPISACIHFAGLKAVGESVEQPLRYYRNNLIGTLNLLQSLNRHGCRRFVFSSSATVYGQAEKVPISETSPLGA--TNPYGKTKLFIEEFLRDLHASPHGGRDWHILILRYFNPVGAHASGRIGEDPVGIPNNLMPFIAQVAVGRREFLSVYGNDYPTPDGTGVRDYIHVVDLAKGHVAALEKLEKDEANVGCVAVNLGTGRGYSVLEMVKAFEKASGRRIPYKIVARRPGDAAVVYADPSFAKTFLGWEAKLGIDEMCASTWKWQSENPHGY 349

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BLAST of jgi.p|Trimin1|351275 vs. uniprot
Match: A0A3B9WT99_9FIRM (UDP-glucose 4-epimerase n=1 Tax=Lachnospiraceae bacterium TaxID=1898203 RepID=A0A3B9WT99_9FIRM)

HSP 1 Score: 455 bits (1170), Expect = 1.870e-155
Identity = 222/343 (64.72%), Postives = 265/343 (77.26%), Query Frame = 1

Query:   79 VLVTGGAGYIGSHTCLELIKAGEEVVVVDNLINAVEESLERVIQLTGCNRKQLQFRKVDLLDRKGLRKVFEEFKFDSCIHFAGLKAVGESVAKPLMYYRNNIEGTLNLVEAMREHGCKKLVFSSSATVYGTPEKLPLDEKSRVGPGITNPYGRTKYMIEEILRDEQVADPTWEILILRYFNPIGAHESGRIGEDPDGIPNNLMPFVAQVAVGRREFLAVFGDDYSTPDGTGVRDYIHVCDLAEGHVAALNKL----RKGGVGCEAVNLGTGKGYSVFEVVKAMEAASGKKIPYKVVPRRAGDVEAMYADPSFAKQYLTWSATRGLKEMCEDTWRWQSKNPHGY 1095
            VLVTGGAG+IGSHTC+EL+ AG EVVV DNL NA EESL+RV ++TG   + L+F K D+LDR+GL K+F+    D  IHFAG KAVGESV KPL YY NNI GTL L + MR++GCK +VFSSSATVYG P+ +P+ E+   G G+TNPYGRTKYMIE+IL+D  VAD  W I++LRYFNPIGAHESGRIGEDP GIPNNLMP+V+QVA+G+ + L VFGDDY TPDGTGVRDYIHV DLA+GHV AL K+     KG  G    NLGTGKG SV E+V A E   G+ +PY++ PRRAGD+   YADPS AK+ L W A RG++EMC D+W WQSKNP+GY
Sbjct:    3 VLVTGGAGFIGSHTCVELLNAGFEVVVADNLYNASEESLKRVEEITG---RSLRFYKTDILDREGLDKIFKSESIDCVIHFAGYKAVGESVQKPLEYYYNNITGTLVLTDVMRQNGCKSIVFSSSATVYGDPKVIPITEECETG-GVTNPYGRTKYMIEQILKDYYVADKEWNIILLRYFNPIGAHESGRIGEDPKGIPNNLMPYVSQVAIGKLKCLGVFGDDYDTPDGTGVRDYIHVVDLADGHVKALAKISEMKEKGADGVMVYNLGTGKGVSVLELVHAFEKVIGRPLPYEIKPRRAGDIAVCYADPSKAKRELGWEAKRGIEEMCRDSWNWQSKNPNGY 341

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BLAST of jgi.p|Trimin1|351275 vs. uniprot
Match: A0A1X6NRK4_PORUM (UDP-glucose 4-epimerase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NRK4_PORUM)

HSP 1 Score: 453 bits (1166), Expect = 8.130e-155
Identity = 220/339 (64.90%), Postives = 263/339 (77.58%), Query Frame = 1

Query:   79 VLVTGGAGYIGSHTCLELIKAGEEVVVVDNLINAVEESLERVIQLTGCNRKQLQFRKVDLLDRKGLRKVFEEFKFDSCIHFAGLKAVGESVAKPLMYYRNNIEGTLNLVEAMREHGCKKLVFSSSATVYGTPEKLPLDEKSRVGPGITNPYGRTKYMIEEILRDEQVADPTWEILILRYFNPIGAHESGRIGEDPDGIPNNLMPFVAQVAVGRREFLAVFGDDYSTPDGTGVRDYIHVCDLAEGHVAALNKLRKGGVGCEAVNLGTGKGYSVFEVVKAMEAASGKKIPYKVVPRRAGDVEAMYADPSFAKQYLTWSATRGLKEMCEDTWRWQSKNPHGY 1095
            VLVTGGAGYIGSHT LEL+  G   VVVDNL N+ EESL+RV +LTG +  Q+ FR VDLL+ + L  VF+EF F +CIHFAGLKAVGESV  PL YY NN+ GTL L+  + ++GCK  VFSSSATVYG  +++P+ E + +G   TNPYGRTK  IEE LRD   A   W ILILRYFNP+GAHESGRIGEDP GIPNNLMP++AQVAVGRRE L++FGDDY T DGTGVRDYIHV DLA+GHVAAL KL    VGC++VNLGTGKGYSV +++  M  A G+++PYK+ PRR GDV  +YADP+FAK +L W A  G++EMCE TW+WQS NP+GY
Sbjct:    6 VLVTGGAGYIGSHTVLELVNEGFTAVVVDNLDNSSEESLKRVSELTGKS-DQIVFRHVDLLNEEALEAVFKEFTFSACIHFAGLKAVGESVKLPLKYYHNNLTGTLILLNLLDKYGCKNFVFSSSATVYGLVKEMPVLEDAEIGA--TNPYGRTKLFIEEFLRDLSRAQEEWNILILRYFNPVGAHESGRIGEDPSGIPNNLMPYIAQVAVGRREHLSIFGDDYPTKDGTGVRDYIHVVDLAKGHVAALEKLTDEKVGCKSVNLGTGKGYSVLDMLNGMSKACGRELPYKMAPRREGDVSVLYADPAFAKSFLGWEAKLGVEEMCESTWKWQSNNPNGY 341

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BLAST of jgi.p|Trimin1|351275 vs. uniprot
Match: A0A7S0G0Y5_9RHOD (UDP-glucose 4-epimerase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G0Y5_9RHOD)

HSP 1 Score: 451 bits (1160), Expect = 7.870e-154
Identity = 218/339 (64.31%), Postives = 262/339 (77.29%), Query Frame = 1

Query:   79 VLVTGGAGYIGSHTCLELIKAGEEVVVVDNLINAVEESLERVIQLTGCNRKQLQFRKVDLLDRKGLRKVFEEFKFDSCIHFAGLKAVGESVAKPLMYYRNNIEGTLNLVEAMREHGCKKLVFSSSATVYGTPEKLPLDEKSRVGPGITNPYGRTKYMIEEILRDEQVADPTWEILILRYFNPIGAHESGRIGEDPDGIPNNLMPFVAQVAVGRREFLAVFGDDYSTPDGTGVRDYIHVCDLAEGHVAALNKLRKGGVGCEAVNLGTGKGYSVFEVVKAMEAASGKKIPYKVVPRRAGDVEAMYADPSFAKQYLTWSATRGLKEMCEDTWRWQSKNPHGY 1095
            VLVTGG+GYIGSHT LEL++AG + VVVDNL+N+ EESL+RV ++TG  +  + F +VDLL  + L KVF+E +F +CIHFAGLKAVGESV  PLMYY NN+ GTLNL+     +GCK  VFSSSATVYG  +K+P+ E + +G   TNPYGRTK  IEE LRD   +DP W I+ILRYFNP+GAHESG+IGEDP GIPNNLMPF+AQVAVGRREFL++FGDDY TPDGTGVRDYIHV DLA+GHV AL KL    VGC  VNLGTGKG SV E+VKA   A+GK +PYK+V RRAGD+  +Y  P +A+ +L W A   L +MC D WRWQS+NP G+
Sbjct:   10 VLVTGGSGYIGSHTVLELVQAGYKAVVVDNLVNSSEESLKRVGEITG-KQDCIDFLEVDLLHFEKLEKVFKEQEFIACIHFAGLKAVGESVKIPLMYYENNLTGTLNLLRLCAAYGCKNFVFSSSATVYGMADKMPVSEDTPLGS--TNPYGRTKLFIEEFLRDVHTSDPEWNIIILRYFNPVGAHESGKIGEDPSGIPNNLMPFIAQVAVGRREFLSIFGDDYPTPDGTGVRDYIHVTDLAKGHVQALRKLASSKVGCTPVNLGTGKGASVLEMVKAFSKAAGKDLPYKLVERRAGDIAELYCSPDYARDFLDWEAKLTLDDMCADVWRWQSQNPDGF 345

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BLAST of jgi.p|Trimin1|351275 vs. uniprot
Match: A0A836C9I1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9I1_9STRA)

HSP 1 Score: 221 bits (562), Expect = 2.190e-71
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1

Query:  100 MFALRAGARSARLARVPARGMAGGHGPAKEYTGIEKVVRGVLKKDEHLVLGIVGFYATLVLLFKMKPSKPAPAAAPIAAAPSTADGDIPSVESPTFSAWIEAPGNADKWFAALAK 444
            MFALRAGARSARLARVPARGMAGGHGPAKEYTGIEKVVRGVLKKDEHLVLGIVGFYATLVLLFKMKPSKPAPAAAPIAAAPSTADGDIPSVESPTFSAWIEAPGNADKWFAALAK
Sbjct:    1 MFALRAGARSARLARVPARGMAGGHGPAKEYTGIEKVVRGVLKKDEHLVLGIVGFYATLVLLFKMKPSKPAPAAAPIAAAPSTADGDIPSVESPTFSAWIEAPGNADKWFAALAK 115

[Close]

BLAST of jgi.p|Trimin1|351275 vs. uniprot
Match: K3WMV8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMV8_GLOUD)

HSP 1 Score: 74.7 bits (182), Expect = 6.530e-14
Identity = 48/102 (47.06%), Postives = 64/102 (62.75%), Query Frame = 1

Query:  145 VPARGMAGGHGPA-KEYTGIEKVVRGVLKKDEHLVLGIVGFYATLVLLFKMKPSKPAP---AAAPIAAAPSTADGDIPSVESPTFSAWIEAPGNADKWFAAL 438
            + AR M+GGHG      TG E  VR VL +D  +VL  +G Y++++LLFK+KPSK AP   AAAP AA  ST+D  IPS+    F  W + PGN ++W  +L
Sbjct:   18 IQARLMSGGHGHGGPPPTGFEAKVRAVLPQDYQIVLATLGIYSSIILLFKLKPSKKAPEAIAAAPAAA--STSDA-IPSLFDDEFDEWSKLPGNVERWEKSL 116

[Close]

BLAST of jgi.p|Trimin1|351275 vs. uniprot
Match: A0A0P1B0D1_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0D1_PLAHL)

HSP 1 Score: 73.6 bits (179), Expect = 1.680e-13
Identity = 42/99 (42.42%), Postives = 54/99 (54.55%), Query Frame = 1

Query:  142 RVPARGMAGGHGPAKEYTGIEKVVRGVLKKDEHLVLGIVGFYATLVLLFKMKPSKPAPAAAPIAAAPSTADGDIPSVESPTFSAWIEAPGNADKWFAAL 438
            R PA+    GHGPA     +E  VR  L KD H+VL  +G Y TL++LFK+KPSK       I +  S+    IPS+    F  W + PGN DKW  +L
Sbjct:   15 RTPAQCRLMGHGPAPVEGSLEAKVRHYLPKDYHIVLATLGAYTTLIMLFKLKPSKKKEEEIVIPSNLSSTSASIPSLFDDEFDEWSKLPGNLDKWEKSL 113

[Close]

BLAST of jgi.p|Trimin1|351275 vs. uniprot
Match: A0A7S2R1X0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R1X0_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.650e-13
Identity = 52/121 (42.98%), Postives = 65/121 (53.72%), Query Frame = 1

Query:   97 VMFALRAGARSARLARV--PARGMAGGHGPAKEYTGIEKVVRGVLKKDEHLVLGIVGFYATLVLL--FKMKPSKPAPAAAPIAAAPSTA-DGDIPSVESPTFSAWIEAPGNADKWFAALAK 444
            VM A++A AR + +  V    R   GGH PA E+TGI+KVVRG   +D  L   I+G Y  ++ L   K K S      AP+  AP  A  GDIPSVES  F  +IE   N  KW  +L K
Sbjct:    2 VMIAIQATARRSAVVAVRHQQRRQMGGHAPAPEWTGIDKVVRGYFPQDHQLAGAILGGYGVVIALGMLKSKLSSSDEEPAPVVVAPVAAITGDIPSVESAEFDTFIENESNLMKWVDSLEK 122

[Close]

BLAST of jgi.p|Trimin1|351275 vs. uniprot
Match: A0A8K1FKH1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKH1_PYTOL)

HSP 1 Score: 70.9 bits (172), Expect = 1.890e-12
Identity = 46/110 (41.82%), Postives = 63/110 (57.27%), Query Frame = 1

Query:  115 AGARSARLARVPARGMAGGHGPA-KEYTGIEKVVRGVLKKDEHLVLGIVGFYATLVLLFKMKPSKPAPAA-APIAAAPSTADGDIPSVESPTFSAWIEAPGNADKWFAAL 438
            A A   R   +  R M+GGHG      TG E  VR VL +D  +VL  +G Y++++LLFK+KPSK APA  AP A + S+A   +PS+    F  W + PGN  +W  +L
Sbjct:    9 AAAAKPRANNMQTRLMSGGHGHGGPPPTGFEAKVRAVLPQDYQIVLATLGIYSSIILLFKLKPSKAAPAVEAPAATSASSA---VPSLFDDEFDQWSKVPGNMQRWEESL 115

[Close]

BLAST of jgi.p|Trimin1|351275 vs. uniprot
Match: A0A3M6VF92_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VF92_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.940e-12
Identity = 41/94 (43.62%), Postives = 55/94 (58.51%), Query Frame = 1

Query:  172 HGPAKEYTGIEKVVRGVLKKDEHLVLGIVGFYATLVLLFKMKPSKPAPAAAPIAAAPSTADGD-----IPSVESPTFSAWIEAPGNADKWFAAL 438
            HGPA     +E  VR  L KD H+VL  +G YAT+++LFK+KPSK    A  I A PS+++ +     IPS+    F  W + PGN DKW  +L
Sbjct:   25 HGPAAPEGSLEAKVRHYLPKDYHIVLATLGAYATIIMLFKLKPSKKK--AEEIVATPSSSNSNSTLTSIPSLFDDEFDEWSKLPGNMDKWEKSL 116

[Close]

BLAST of jgi.p|Trimin1|351275 vs. uniprot
Match: W2PCG6_PHYPN (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2PCG6_PHYPN)

HSP 1 Score: 66.2 bits (160), Expect = 1.030e-10
Identity = 38/99 (38.38%), Postives = 49/99 (49.49%), Query Frame = 1

Query:  142 RVPARGMAGGHGPAKEYTGIEKVVRGVLKKDEHLVLGIVGFYATLVLLFKMKPSKPAPAAAPIAAAPSTADGDIPSVESPTFSAWIEAPGNADKWFAAL 438
            R PA+     HGPA     +E  VR  L +D H+VL  +G Y TL++LFK+KPSK                  IPS+    F  W + PGN DKW  +L
Sbjct:   15 RTPAQSRLMSHGPAPAEGSLEAKVRHYLPEDYHIVLATLGAYTTLIMLFKLKPSKXXXXXXXXXXXXXXXSTSIPSLFDDEFDEWSKLPGNLDKWEKSL 113

[Close]

BLAST of jgi.p|Trimin1|351275 vs. uniprot
Match: H3HCQ7_PHYRM (PDEase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCQ7_PHYRM)

HSP 1 Score: 68.9 bits (167), Expect = 3.400e-10
Identity = 38/99 (38.38%), Postives = 53/99 (53.54%), Query Frame = 1

Query:  142 RVPARGMAGGHGPAKEYTGIEKVVRGVLKKDEHLVLGIVGFYATLVLLFKMKPSKPAPAAAPIAAAPSTADGDIPSVESPTFSAWIEAPGNADKWFAAL 438
            R PA+     HGPA     +E  VR  L +D H+VL  +G Y TL++LFK+KPSK       I A+ ++    +PS+    F  W + PGN  KW  +L
Sbjct:  548 RTPAQSRLMSHGPAPPEGSLEAKVRHYLPEDYHIVLATLGAYTTLIMLFKLKPSKKKEEEIVIPASSNSTSTSVPSLFDDEFDEWSKLPGNLAKWEKSL 646

[Close]

BLAST of jgi.p|Trimin1|351275 vs. uniprot
Match: A0A2D4BL17_PYTIN (PDEase domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BL17_PYTIN)

HSP 1 Score: 66.2 bits (160), Expect = 2.870e-9
Identity = 45/117 (38.46%), Postives = 59/117 (50.43%), Query Frame = 1

Query:  142 RVPARGMAGGHGPAKEYTGIEK------------------VVRGVLKKDEHLVLGIVGFYATLVLLFKMKPSKPAPAAAPIAAAPSTADGDIPSVESPTFSAWIEAPGNADKWFAAL 438
            R+  R MAG HGP    TG E                       VL +D  +VL  +GFY+T++LLFK+KPSK A   AP AA+   A   IPS+    F+ W + PGN D+W  +L
Sbjct:  538 RMQTRTMAGHHGPPP--TGFEAKXXXXXXXXXXXXXXXXXXXXAVLPQDYQIVLATLGFYSTIILLFKLKPSKKA-VEAPAAASAPAASSSIPSLFDDEFAEWSKLPGNMDRWEKSL 651

[Close]

BLAST of jgi.p|Trimin1|351275 vs. uniprot
Match: G5A273_PHYSP (PDEase domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A273_PHYSP)

HSP 1 Score: 65.9 bits (159), Expect = 3.950e-9
Identity = 38/99 (38.38%), Postives = 49/99 (49.49%), Query Frame = 1

Query:  142 RVPARGMAGGHGPAKEYTGIEKVVRGVLKKDEHLVLGIVGFYATLVLLFKMKPSKPAPAAAPIAAAPSTADGDIPSVESPTFSAWIEAPGNADKWFAAL 438
            R PA+     HGPA     +E  VR  L +D H+VL  +G Y TL++LFK+KPSK                  IPS+    F  W + PGN DKW  +L
Sbjct:  603 RTPAQKRLMSHGPAPPEGSLEAKVRHYLPEDYHIVLATLGAYTTLIMLFKLKPSKXXXXXXXXXXXXXXTSTSIPSLFDEEFDEWSKLPGNLDKWEKSL 701

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351275 vs. uniprot
BLAST of jgi.p|Trimin1|351275 vs. uniprot

BLAST of jgi.p|Trimin1|351275 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YLY8_9STRA	2.700e-306	100.00	Galactose-4-epimerase, UDP n=1 Tax=Tribonema minus...	[more]
D7FL43_ECTSI	5.240e-191	77.62	UDP-glucose 4-epimerase n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A4D9CZK9_9STRA	2.490e-167	67.24	UDP-glucose 4-epimerase n=2 Tax=Monodopsidaceae Ta...	[more]
A0A6V1XCR0_HETAK	1.630e-166	67.14	UDP-glucose 4-epimerase n=2 Tax=Heterosigma akashi...	[more]
A0A7S2W7X1_9STRA	9.660e-161	64.49	UDP-glucose 4-epimerase n=1 Tax=Rhizochromulina ma...	[more]
A0A7S3KXG9_9STRA	1.060e-159	66.38	Hypothetical protein n=1 Tax=Amphora coffeiformis ...	[more]
M1VE42_CYAM1	3.660e-156	65.03	UDP-glucose 4-epimerase n=2 Tax=cellular organisms...	[more]
A0A3B9WT99_9FIRM	1.870e-155	64.72	UDP-glucose 4-epimerase n=1 Tax=Lachnospiraceae ba...	[more]
A0A1X6NRK4_PORUM	8.130e-155	64.90	UDP-glucose 4-epimerase n=1 Tax=Porphyra umbilical...	[more]
A0A7S0G0Y5_9RHOD	7.870e-154	64.31	UDP-glucose 4-epimerase n=2 Tax=Rhodosorus marinus...	[more]

Pages

BLAST of jgi.p|Trimin1|351275 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15


Match Name	E-value	Identity	Description
A0A836C9I1_9STRA	2.190e-71	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
K3WMV8_GLOUD	6.530e-14	47.06	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A0P1B0D1_PLAHL	1.680e-13	42.42	Uncharacterized protein n=1 Tax=Plasmopara halsted...	[more]
A0A7S2R1X0_9STRA	3.650e-13	42.98	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
A0A8K1FKH1_PYTOL	1.890e-12	41.82	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A3M6VF92_9STRA	1.940e-12	43.62	Uncharacterized protein n=1 Tax=Peronospora effusa...	[more]
W2PCG6_PHYPN	1.030e-10	38.38	Uncharacterized protein n=11 Tax=Phytophthora TaxI...	[more]
H3HCQ7_PHYRM	3.400e-10	38.38	PDEase domain-containing protein n=1 Tax=Phytophth...	[more]
A0A2D4BL17_PYTIN	2.870e-9	38.46	PDEase domain-containing protein (Fragment) n=1 Ta...	[more]
G5A273_PHYSP	3.950e-9	38.38	PDEase domain-containing protein n=1 Tax=Phytophth...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_85	contig	Contig_85:595188..601374 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|351275\|estExt_Genemark1.C_Ctg_850069
BRITE	ko00000,ko00001,ko00002,ko01000
KEGG rclass	RC00289
KEGG Reaction	R00291,R02984
KEGG Module	M00361,M00362,M00632
KEGG Pathway	ko00052,ko00520,ko01100,map00052,map00520,map01100
KEGG ko	ko:K01784
EC	5.1.3.2
GOs	GO:0000271,GO:0003674,GO:0003824,GO:0003978,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005795,GO:0005829,GO:0005886,GO:0005975,GO:0005976,GO:0006073,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009555,GO:0009653,GO:0009832,GO:0009888,GO:0009969,GO:0009987,GO:0010015,GO:0010053,GO:0010383,GO:0010410,GO:0010411,GO:0012505,GO:0016020,GO:0016051,GO:0016853,GO:0016854,GO:0016857,GO:0022622,GO:0030154,GO:0031984,GO:0032501,GO:0032502,GO:0033692,GO:0034637,GO:0034645,GO:0042546,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044036,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0048229,GO:0048364,GO:0048731,GO:0048856,GO:0048869,GO:0050373,GO:0071554,GO:0071669,GO:0071704,GO:0071840,GO:0071944,GO:0090558,GO:0090627,GO:0098791,GO:0099402,GO:1901576,GO:1905392
Preferred name	UGE1
Description	racemase and epimerase activity, acting on carbohydrates and derivatives
COG category	M
Max annot lvl	2759\|Eukaryota
EggNOG OGs	COG1087@1\|root,KOG1371@2759\|Eukaryota
Evalue	3.43e-193
Seed ortholog	2880.D7FL43
Hectar predicted targeting category	signal peptide
Ec32 ortholog description	galactose-4-epimerase, UDP
Ec32 ortholog	Ec-05_006710.1
TranscriptId	351597
Track	FilteredModels1
ProteinId	351275

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351275	gene_12217	Tribonema minus UTEX_B_3156	gene	Contig_85 595188..601374 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351275	Trimin1\|351275\|estExt_Genemark1.C_Ctg_850069	Tribonema minus UTEX_B_3156	polypeptide	Contig_85 595448..601374 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_12217_7	exon_12217_7	Tribonema minus UTEX_B_3156	exon	Contig_85 595188..595759 -
exon_12217_6	exon_12217_6	Tribonema minus UTEX_B_3156	exon	Contig_85 596489..596592 -
exon_12217_5	exon_12217_5	Tribonema minus UTEX_B_3156	exon	Contig_85 597252..597393 -
exon_12217_4	exon_12217_4	Tribonema minus UTEX_B_3156	exon	Contig_85 598065..598234 -
exon_12217_3	exon_12217_3	Tribonema minus UTEX_B_3156	exon	Contig_85 598604..598761 -
exon_12217_2	exon_12217_2	Tribonema minus UTEX_B_3156	exon	Contig_85 599863..600086 -
exon_12217_1	exon_12217_1	Tribonema minus UTEX_B_3156	exon	Contig_85 601225..601374 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_12217	UTR3_12217	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_85 595188..595447 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_12217	CDS_12217	Tribonema minus UTEX_B_3156	CDS	Contig_85 601225..601374 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_85:595188..601374-
coding sequence from alignment at Contig_85:595188..601374-

spliced messenger RNA

>mRNA_12217 ID=mRNA_12217|Name=jgi.p|Trimin1|351275|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1520bp|location=Sequence derived from alignment at Contig_85:595188..601374- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGTAAAGCAGATCACCGCATGGGCGGCTCTGTCCGCTCTGGTGACGCT
CTCTCCCTGCGCGCAGGCCTTTGCAAGAGTGCTTGTGACCGGGGGAGCAG
GGTACATCGGAAGCCACACGTGTCTGGAGCTTATAAAGGCGGGCGAGGAG
GTGGTGGTCGTGGACAACCTCATCAATGCAGTGGAGGAGTCTTTGGAGAG
GGTAATCCAGCTGACAGGATGCAATAGGAAGCAGCTGCAGTTCCGGAAGG
TGGATTTGCTGGACCGCAAGGGCCTCAGGAAGGTCTTTGAGGAGTTCAAG
TTTGACAGCTGCATACACTTTGCGGGCTTGAAGGCGGTGGGCGAGAGCGT
TGCTAAGCCGCTCATGTACTACAGAAACAACATCGAGGGGACGTTGAACT
TGGTAGAGGCAATGCGGGAGCACGGCTGCAAGAAGCTGGTCTTCAGCAGC
AGCGCCACTGTTTACGGCACTCCAGAGAAGCTGCCTCTGGACGAGAAGAG
CAGAGTGGGCCCGGGCATCACCAACCCATATGGGCGAACCAAGTACATGA
TAGAGGAGATCCTACGCGACGAGCAGGTGGCTGACCCCACCTGGGAAATC
CTCATTCTGCGCTACTTCAACCCCATTGGCGCGCACGAGTCGGGGCGCAT
TGGGGAGGACCCGGATGGCATTCCTAACAACCTCATGCCATTTGTCGCAC
AGGTGGCGGTGGGGAGGCGTGAGTTCCTGGCCGTGTTTGGCGATGACTAC
TCAACGCCTGATGGTACCGGCGTGCGGGACTACATCCACGTATGCGATCT
TGCTGAGGGACACGTGGCAGCGCTCAACAAGCTGCGCAAGGGGGGCGTGG
GATGCGAGGCTGTCAACTTGGGCACTGGAAAGGGCTACAGCGTGTTTGAG
GTGGTCAAGGCCATGGAAGCAGCGTCTGGCAAGAAGATCCCCTACAAGGT
GGTCCCCCGCCGTGCCGGAGACGTAGAGGCCATGTACGCAGACCCTTCTT
TTGCCAAGCAGTACCTCACATGGAGCGCAACGCGTGGCCTTAAGGAGATG
TGTGAGGACACATGGCGGTGGCAGAGCAAGAACCCTCACGGCTACGCCCC
TGTAGAAGCAGCTGACGCAGGCACTGGCGGACAAGACATTGTTGAGATCG
ATGCTGATGGTGGTGAGGTTAACATGGCCAGCCTCAGGAACTCGCGCATT
GTCAAGGAGGCCGGCAAGCACCAGTCCGGTTCCAGCTCAGTAGCTCACGA
GCTCAAGTAAAGGCCAGATGTCAACATGTCCAATGAGATTGTGGGCTCGT
GGTGCTGTGCCGGTGAGCGGCGACCATGGCGCTGCCCGGCTCATGCAGCT
GGCAGTACGCATGCATGGGAGGCTACAGAGGCAGATGCATGCCTTATTTG
TCGGCCGTGCTTTGGGGATAAGTGTGCGCTGCCACCATGTGCTTTAGTGG
TATTTGTTGTGACCGCCATTGCAGCCGGGGTGTCATGCGACTTACACAAT
CTACGGCTCACGTATTCCAT

protein sequence of jgi.p|Trimin1|351275

>Trimin1|351275|estExt_Genemark1.C_Ctg_850069 ID=Trimin1|351275|estExt_Genemark1.C_Ctg_850069|Name=jgi.p|Trimin1|351275|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=420bp
MVKQITAWAALSALVTLSPCAQAFARVLVTGGAGYIGSHTCLELIKAGEE
VVVVDNLINAVEESLERVIQLTGCNRKQLQFRKVDLLDRKGLRKVFEEFK
FDSCIHFAGLKAVGESVAKPLMYYRNNIEGTLNLVEAMREHGCKKLVFSS
SATVYGTPEKLPLDEKSRVGPGITNPYGRTKYMIEEILRDEQVADPTWEI
LILRYFNPIGAHESGRIGEDPDGIPNNLMPFVAQVAVGRREFLAVFGDDY
STPDGTGVRDYIHVCDLAEGHVAALNKLRKGGVGCEAVNLGTGKGYSVFE
VVKAMEAASGKKIPYKVVPRRAGDVEAMYADPSFAKQYLTWSATRGLKEM
CEDTWRWQSKNPHGYAPVEAADAGTGGQDIVEIDADGGEVNMASLRNSRI
VKEAGKHQSGSSSVAHELK*

mRNA from alignment at Contig_85:595188..601374-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_12217 ID=mRNA_12217|Name=jgi.p|Trimin1|351275|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6187bp|location=Sequence derived from alignment at Contig_85:595188..601374- (Tribonema minus UTEX_B_3156 )
ATGGTAAAGCAGATCACCGCATGGGCGGCTCTGTCCGCTCTGGTGACGCT
CTCTCCCTGCGCGCAGGCCTTTGCAAGAGTGCTTGTGACCGGGGGAGCAG
GGTACATCGGAAGCCACACGTGTCTGGAGCTTATAAAGGCGGGCGAGGAG
GTGGGTCACCGGCTATCATTCTTGTGTACGTCGCATCTTTCCCGGCAGCT
AGTACTGTGCTGCTATTAGAGCGTCATTTGCTGCCAGGAGCTCGGTGCGT
ATGTACTTCAACTAGAAGGGCCTAGTGACTTTGCCATGTACTTGTGTGTG
AACATTGATGTTGTTTAAAGCTCGTGCAAGTGCGCGATAGCGAGATTTCG
ACTAAAATGCCATTCCGCTTGCAGCTGATATGCACGACAAGCGTGCGTGA
AGGTGCTGCTGCACTATGCTCGACTCAAATTCTGTCTGGCTTGCAGGGGG
TTAGACGTGCTTGTCACAGCACAGCCGCACCTGATGATGTGCTATGAGAC
ACATTTGTGTTTGAACTCCGCTTGCGCGGCCAATAATGTCTGGTGGGTCT
TTCAGCTTGGCTGTATCTGAAAACGCAGTGAAGAATCTTGCACACCTTAG
ACGACAGGTCGCGTTCACGACAGGGTCGCGACGGACTGTCGTGAAACGAC
AGCCAAAAGTCCTGTCGCGACGGTTCGACAGACCCATTGCCACCTTCCTG
TCGTCTAGACGACGCCGTCGCAACGGGTCTCGCTGACCTCCTGTCGTCTA
GACCGACGCCGTCGTGCAATGGAACCACTTTTACTGTCGTGTCCTGTCGT
GTGTTGCACGACGCACATACAACTGCTACAGGGTCGACAGCCAGGCTTAA
GAGGCATAAGGATAGCTGACGAAGCATAGCACAAGCTCTAACACCATTCT
TGGCACTGCGCGCTGGCTGAAATAGGTCGTTTCGCGATCGCACTGCAACT
TCTGCTTGAAGTTTGATCTGTCGTTCCTGTCGTGAACGTGCTCGCAAAAC
CCCTGTCGTCTAGATGACGCCGTCGCGACAGGCTGGCGCAAGGTCCTGTC
GTCTAGATGACACCGTCGCGACAGACTGGCGCATAGTACTGTCGTCTAGA
CGACACCGTCGCGACAGGCTGGGATAAGTTCCTGTCGTCTAGACGACGCC
GTCGCGACGGACTGTCGTCTAATGTGTGGAATCTTGGCATCTTGAACAGC
CAATGCTCAAGTCAAGTTGTCGAATGTCGAATGCAGCGCAGCTTGCACTT
CCTGCTGCTGATGCGGCTCACTCATTTGACGCCTGCAGGTGGTGGTCGTG
GACAACCTCATCAATGCAGTGGAGGAGTCTTTGGAGAGGGTAATCCAGCT
GACAGGATGCAATAGGAAGCAGCTGCAGTTCCGGAAGGTGGATTTGCTGG
ACCGCAAGGGCCTCAGGAAGGTCTTTGAGGAGTTCAAGTTTGACAGCTGC
ATACACTTTGCGGGCTTGAAGGCGGTGGGCGAGAGCGTTGCTAAGCCGCT
CATGTACTACAGGTATGCCATTAGGTACTGCATCTTTTGGGCGTTCCATA
TGCTGTAGGCTTACGTCTGTACTTGTTGACCGTAAATCTGCTGATGTCCC
AGAACCTCATAGTCATCAACGGGCACTGCACAACGGCTGATACGGCACCA
CTGATATGGTCACATGGCGGTGAAACAAAGGTGCTGTATCACGAAACACA
GGCCTAGGAGCAGCGACACCAACCCTAACACTAACCCTGTAGTTCCCAAA
GCTCACTGCATTAGCAACAAGTGCAACCGTTTGTCAACCAAGCCAGCATT
ATAGGTTCAATGTATGCTGAACGTCACATGTGCTGGTGCTCGTGCAGCAG
TGGCAGCTGCTGCGCATCTACGCACCGAACGAATCTGGTACTGCTTTGCG
CAGCCACCTATTCAGCACATGTCAAAGTGTCTAGCAAGCTTGCGCACTTG
TGCCAGCTCACCTGAATCAGCCGGGTTTTGAATGTATCCCATATATGCAA
TTGCCTCGGCAGCATGGAAGTCAAATGATGCGCCTGCTGCATGTGGAAGC
CCTTGCGATTGCCAGTGACAACCTCATCACAAGTATTTACTGGTAGTGTT
GGCGCAGCTTCAACGACAACATTGATGCGCGACACAGAAAACACATGTTC
GAGGTTTATGTTTGAGCGCTGAAGAACCAAGTGCGTTTCAAACTCCACAA
CTGCCGCAACGGGTTCGGGTGCAGATGCCATAGTCTACACGCCTTGACTA
TACCGCTCATAGGTAATGCAAAATCTCAATGCGCTCAATGATGTCCGCCT
TCATGACACTCGTGTAATGTGAGATTACGTTGCCTTGACGAGTGTTGCCT
TCATGTACACTGACCATGTGGTGCTGCACACAATAACACTAACCGCAACC
CTTGAATGTGTCATGATCTTACCGAGAGCTACTCGAGCTTCACTCAGCAC
ATGCTTTCACCAAGCCACAATAAACAACTGCTTCAAGTATGTTTCAAATA
AGTGCTGGAAGGACAAAGCCAGTATGAAACAATCGCTACTTATTCTGTCA
ATGGAGTGCAGGTGATGTCAGCCTGCTCAATATGCTTTTTAATACTTTGT
GCCACCCGTGAAGAAACAACATCGAGGGGACGTTGAACTTGGTAGAGGCA
ATGCGGGAGCACGGCTGCAAGAAGCTGGTCTTCAGCAGCAGCGCCACTGT
TTACGGCACTCCAGAGAAGCTGCCTCTGGACGAGAAGAGCAGAGTGGGCC
CGGGCATCACCAACCCATATGGTGAGCCTCTTAGCTGATGCTGTGCCTTG
GATGCCTACACACATGTCATTGTGAGACTGCTGCACGTGTTGGCGTAGAT
CTGAGGCACTTGCGTCTACTGCCAGCAACGAACATGCTTGAATCACTGCA
ACAAATTTGTGGCATGTCGTGAAACTTCATGTGCACTCATCCGCATCCTG
TGCGTTTCTTCATGACTTGAGCCACATGTACCCAAATAACAGTTCTCAAT
TATCACCCATGCGCACGCCCCATATTGTCGTGGATTGGGATCTGTACATA
GCACTACTGTGTGGGCTTGGTGCGCTGACACTATGCTCATGCATCACCAC
CGCCGTTGCCATTGCCTGCTGTCTCTTTTGTCATGTGCAGGGCGAACCAA
GTACATGATAGAGGAGATCCTACGCGACGAGCAGGTGGCTGACCCCACCT
GGGAAATCCTCATTCTGCGCTACTTCAACCCCATTGGCGCGCACGAGTCG
GGGCGCATTGGGGAGGACCCGGATGGCATTCCTAACAACCTCATGCCATT
TGTCGCACAGGTGCGCGCTGCAACGTGGTTGAGTGCAGTGCTTGCCCTTG
GGTGGCAATGTAGAAAGATTTGCGTCTGAAGTGTTGTGTCTTGTTTTAGG
GATAGGGTTAAGCTTAGGGTCAGGGCTGTGGCATGCGCATGAAAAATATT
GCGCTGGTTATTGCGATCCTTCAGGCTAGTGTGAGATTCAAAATTGCAGA
GTACCAGACGTGTAAAATTGTTGCAGTTCAGAGCTCGAACAGTAAACTCT
GGTCGGTTGTGTGGCCTGCCCCATCCATGCAGCAGGGTTAGGGTTAGGTT
CAGTTCAGGTCCAGGGGTAGGATTAGGGTTTCATGCAATTCAACCTTTGT
GATTTTTTGTGGGCTTGAGCCTTTCGATTCTAACCTTTGCCCCTGGGCGC
ACACACACCATTGCAGTTCTGTCGTGGCCATTTTGCAATGGCAATGGTGT
TTGTAGGCAATGTGGCTGTTGAAAAGACGAGCAGCACCAGTCAGGCTGAC
CACCTGTGCAATGTGGTAGAGAGCGTGACTTGCGTATCTGCGACATACAT
CTAATGTATAAGCTCACAAGGTGTTGGTCACTTTCCATGATCTGTGCGCC
CTATACCCCAACTTCAATGAGCTGCTGAAGGGAAGGCAAGCTCACACACC
CCTCAATCATTTGCTCGTCGTCTCCGTTCAGGTGGCGGTGGGGAGGCGTG
AGTTCCTGGCCGTGTTTGGCGATGACTACTCAACGCCTGATGGTACCGGC
GTGCGGGACTACATCCACGTATGCGATCTTGCTGAGGGACACGTGGCAGC
GCTCAACAAGCTGCGCAAGGGGGGTGAGTCTTGTGTCTTTGCTGACTTCA
GGCTTCGCATCACATCAGCCATATTGGTGTGTGTGTGACCTCATGTTTGT
GCAAACTCTTGGCAAGTCTCGAGCGCTTGAGGCGATGGGCCTAGAGTCCA
GTGTCAGACAGGATGTACATAAGCTAAGCCTCGCCTACCTCACTCTTCTA
ACATGACCAACTCCTCACATGATGACTCAGTGAAAGCATGTACTTCTACT
TGAAGTTTGTGCGGCAACTTTTACTTTGAGGAGTGAATTTACAACTGACA
GTATGCTGCCCGTAGTGTAAGATGTTGATGACAGCCTGCACAGAACTTCA
TGTAGCATACATCAACAGCGGGAAGGCGCTCAATGGGCATAGTGCGCTGA
AACTGCAGTTTACAGAATCATGTGTTGTCGTGTCAGTGCTTGGTACCCCC
AAAATCTGATATATGAAGAGATGGTAACCACAATGGCTGCCTTGTCGGCG
TGCTACAACTACTCTCACGCATGAATGGCACAATGAACTTGCACATGCAG
GGGTGTGCATATGTGTTGAATGCTATTCAGCATCTGCATGTATGCATACA
ATGCGCACGCGCTCGTGACTAGTTTGGCAGTTGCGTTTGCTGACATGTGT
TCTTGCACACCACCTGCGCCTTCTCTGTGCAGGCGTGGGATGCGAGGCTG
TCAACTTGGGCACTGGAAAGGGCTACAGCGTGTTTGAGGTGGTCAAGGCC
ATGGAAGCAGCGTCTGGCAAGAAGATCCCCTACAAGGCAAGGCAGTTCAC
GCTTATGATGATGTCCGCTTTTGACCGCCATTAAGCCCCCCCTTGCAAGC
ATTCGTCGTGTCGAGCGCCATGAACCATTAGGCAGGCCATGTTGCTGAAA
GCAGTCTTCACATGATTTGCAATCAAACCGGGTCTCGCGCCGCATTCTGC
GACATACTCCTGTGTACCTATGGCTTTGGGGTTTAGGGTTACGTGCTGTA
TGTGAAGCTGTGGGACGGTGCCGATGCGGCGGTTGCAGGAAATGCGAATG
CGCAGCTGAGAGCAGGTTGTCTATGCATAGGATAGCATGTTGATCATTTG
ACTATATTGCCAATCACATCCGCAGCATGATCCTCTGATGTCAATGTTGC
GCCTTGCCATCTGACAATGGTGCCCATCATCACATAGTTGTGCAGTTCTA
TGTGGGCAGCGCATGCTGCAGCAGCGCTGATGCTTCTTCTGTTGCGTGAG
CACATGAGTAGCGTCTGCAGCCGTCTTTAAGCAAGTAGTTTCCGCTGCAT
CGCTTCGCGTGCAGCCAACCAGCAAGCCTTGGTCTGCAAGCTCTACGCTG
CTCCAACATTCCATGCGCCCCTTCCTTGCATGTACTGTGCACTGACACAC
TCATAGTCCTGACCATATACTGTACTGCCCCATCCAACATCACCCCCCCC
CCCTCCCCTCCCATCCTGACATCACCTGTCCCCCCTTACCCCCCCCCCCC
CCCCCCCCTTCCCAGGTGGTCCCCCGCCGTGCCGGAGACGTAGAGGCCAT
GTACGCAGACCCTTCTTTTGCCAAGCAGTACCTCACATGGAGCGCAACGC
GTGGCCTTAAGGAGATGTGTGAGGACACATGGCGGTGGCAGAGCAAGAAC
CCTCACGGCTACGCCCCTGTAGAAGCAGCTGACGCAGGCACTGGCGGACA
AGACATTGTTGAGATCGATGCTGATGGTGGTGAGGTTAACATGGCCAGCC
TCAGGAACTCGCGCATTGTCAAGGAGGCCGGCAAGCACCAGTCCGGTTCC
AGCTCAGTAGCTCACGAGCTCAAGTAAAGGCCAGATGTCAACATGTCCAA
TGAGATTGTGGGCTCGTGGTGCTGTGCCGGTGAGCGGCGACCATGGCGCT
GCCCGGCTCATGCAGCTGGCAGTACGCATGCATGGGAGGCTACAGAGGCA
GATGCATGCCTTATTTGTCGGCCGTGCTTTGGGGATAAGTGTGCGCTGCC
ACCATGTGCTTTAGTGGTATTTGTTGTGACCGCCATTGCAGCCGGGGTGT
CATGCGACTTACACAATCTACGGCTCACGTATTCCAT

Coding sequence (CDS) from alignment at Contig_85:595188..601374-

>mRNA_12217 ID=mRNA_12217|Name=jgi.p|Trimin1|351275|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1260bp|location=Sequence derived from alignment at Contig_85:595188..601374- (Tribonema minus UTEX_B_3156 )
ATGGTAAAGCAGATCACCGCATGGGCGGCTCTGTCCGCTCTGGTGACGCT
CTCTCCCTGCGCGCAGGCCTTTGCAAGAGTGCTTGTGACCGGGGGAGCAG
GGTACATCGGAAGCCACACGTGTCTGGAGCTTATAAAGGCGGGCGAGGAG
GTGGTGGTCGTGGACAACCTCATCAATGCAGTGGAGGAGTCTTTGGAGAG
GGTAATCCAGCTGACAGGATGCAATAGGAAGCAGCTGCAGTTCCGGAAGG
TGGATTTGCTGGACCGCAAGGGCCTCAGGAAGGTCTTTGAGGAGTTCAAG
TTTGACAGCTGCATACACTTTGCGGGCTTGAAGGCGGTGGGCGAGAGCGT
TGCTAAGCCGCTCATGTACTACAGAAACAACATCGAGGGGACGTTGAACT
TGGTAGAGGCAATGCGGGAGCACGGCTGCAAGAAGCTGGTCTTCAGCAGC
AGCGCCACTGTTTACGGCACTCCAGAGAAGCTGCCTCTGGACGAGAAGAG
CAGAGTGGGCCCGGGCATCACCAACCCATATGGGCGAACCAAGTACATGA
TAGAGGAGATCCTACGCGACGAGCAGGTGGCTGACCCCACCTGGGAAATC
CTCATTCTGCGCTACTTCAACCCCATTGGCGCGCACGAGTCGGGGCGCAT
TGGGGAGGACCCGGATGGCATTCCTAACAACCTCATGCCATTTGTCGCAC
AGGTGGCGGTGGGGAGGCGTGAGTTCCTGGCCGTGTTTGGCGATGACTAC
TCAACGCCTGATGGTACCGGCGTGCGGGACTACATCCACGTATGCGATCT
TGCTGAGGGACACGTGGCAGCGCTCAACAAGCTGCGCAAGGGGGGCGTGG
GATGCGAGGCTGTCAACTTGGGCACTGGAAAGGGCTACAGCGTGTTTGAG
GTGGTCAAGGCCATGGAAGCAGCGTCTGGCAAGAAGATCCCCTACAAGGT
GGTCCCCCGCCGTGCCGGAGACGTAGAGGCCATGTACGCAGACCCTTCTT
TTGCCAAGCAGTACCTCACATGGAGCGCAACGCGTGGCCTTAAGGAGATG
TGTGAGGACACATGGCGGTGGCAGAGCAAGAACCCTCACGGCTACGCCCC
TGTAGAAGCAGCTGACGCAGGCACTGGCGGACAAGACATTGTTGAGATCG
ATGCTGATGGTGGTGAGGTTAACATGGCCAGCCTCAGGAACTCGCGCATT
GTCAAGGAGGCCGGCAAGCACCAGTCCGGTTCCAGCTCAGTAGCTCACGA
GCTCAAGTAA