mRNA_12015 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|338718
Unique Name	mRNA_12015
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|338718 vs. uniprot
Match: A0A836C789_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C789_9STRA)

HSP 1 Score: 661 bits (1706), Expect = 6.740e-231
Identity = 612/612 (100.00%), Postives = 612/612 (100.00%), Query Frame = 1

Query:    1 METGPPPASAVPAALTATTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAPEVTTTPAAAVETPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEAEGAAGDAAVXXXXXXXXXXXIRVLRDSXXXXXXXERXXXXXGCAGRGSGGDRLWDDDGIRPQAQLIVSLTAQGNAEDPDDNSEDDGIAGAFKSKVKEPTRYAHKDGAALRATKREVMEGXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVNAFEAKRVAYFKSQTSTNVRYWTALKEMAGESKAKAERLEXXXXXXXXXXXXVGWFNGRLAAQRAYACALLDVNDETAGIKKGATRTALFGKSASTTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTQLSFSSRRGSSGALGQLPTGTVIKGAVGAAGGNGELQDELCGMDVTQAQEIMELIVLLEGTTGAELKKGHIDISTQVEMVITEGNDFLVSLDALGLYVDNEAAAVTLHEDWAAAVTLDENPLSLTLVVGAXXXXXXXXXXXHGKKAAAAAAKVAEKAXXXXXXXXXLXXXXXXXXAKVDFWLLDARY 1836
            METGPPPASAVPAALTATTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAPEVTTTPAAAVETPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEAEGAAGDAAVXXXXXXXXXXXIRVLRDSXXXXXXXERXXXXXGCAGRGSGGDRLWDDDGIRPQAQLIVSLTAQGNAEDPDDNSEDDGIAGAFKSKVKEPTRYAHKDGAALRATKREVMEGXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVNAFEAKRVAYFKSQTSTNVRYWTALKEMAGESKAKAERLEXXXXXXXXXXXXVGWFNGRLAAQRAYACALLDVNDETAGIKKGATRTALFGKSASTTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTQLSFSSRRGSSGALGQLPTGTVIKGAVGAAGGNGELQDELCGMDVTQAQEIMELIVLLEGTTGAELKKGHIDISTQVEMVITEGNDFLVSLDALGLYVDNEAAAVTLHEDWAAAVTLDENPLSLTLVVGAXXXXXXXXXXXHGKKAAAAAAKVAEKAXXXXXXXXXLXXXXXXXXAKVDFWLLDARY
Sbjct:    1 METGPPPASAVPAALTATTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAPEVTTTPAAAVETPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEAEGAAGDAAVXXXXXXXXXXXIRVLRDSXXXXXXXERXXXXXGCAGRGSGGDRLWDDDGIRPQAQLIVSLTAQGNAEDPDDNSEDDGIAGAFKSKVKEPTRYAHKDGAALRATKREVMEGXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVNAFEAKRVAYFKSQTSTNVRYWTALKEMAGESKAKAERLEXXXXXXXXXXXXVGWFNGRLAAQRAYACALLDVNDETAGIKKGATRTALFGKSASTTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTQLSFSSRRGSSGALGQLPTGTVIKGAVGAAGGNGELQDELCGMDVTQAQEIMELIVLLEGTTGAELKKGHIDISTQVEMVITEGNDFLVSLDALGLYVDNEAAAVTLHEDWAAAVTLDENPLSLTLVVGAXXXXXXXXXXXHGKKAAAAAAKVAEKAXXXXXXXXXLXXXXXXXXAKVDFWLLDARY 612

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|338718 vs. uniprot

BLAST of jgi.p|Trimin1|338718 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836C789_9STRA	6.740e-231	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_93	contig	Contig_93:39381..52045 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|338718\|MIX47481_2_8
Hectar predicted targeting category	other localisation
TranscriptId	339040
Track	FilteredModels1
ProteinId	338718

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|338718	gene_12015	Tribonema minus UTEX_B_3156	gene	Contig_93 39381..52045 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|338718	Trimin1\|338718\|MIX47481_2_8	Tribonema minus UTEX_B_3156	polypeptide	Contig_93 39381..52045 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_12015_1	exon_12015_1	Tribonema minus UTEX_B_3156	exon	Contig_93 39381..39416 +
exon_12015_2	exon_12015_2	Tribonema minus UTEX_B_3156	exon	Contig_93 39716..40024 +
exon_12015_3	exon_12015_3	Tribonema minus UTEX_B_3156	exon	Contig_93 40086..40215 +
exon_12015_4	exon_12015_4	Tribonema minus UTEX_B_3156	exon	Contig_93 40729..40778 +
exon_12015_5	exon_12015_5	Tribonema minus UTEX_B_3156	exon	Contig_93 41460..41594 +
exon_12015_6	exon_12015_6	Tribonema minus UTEX_B_3156	exon	Contig_93 41675..41719 +
exon_12015_7	exon_12015_7	Tribonema minus UTEX_B_3156	exon	Contig_93 41869..41913 +
exon_12015_8	exon_12015_8	Tribonema minus UTEX_B_3156	exon	Contig_93 41991..42038 +
exon_12015_9	exon_12015_9	Tribonema minus UTEX_B_3156	exon	Contig_93 43102..43163 +
exon_12015_10	exon_12015_10	Tribonema minus UTEX_B_3156	exon	Contig_93 43970..44027 +
exon_12015_11	exon_12015_11	Tribonema minus UTEX_B_3156	exon	Contig_93 44197..44373 +
exon_12015_12	exon_12015_12	Tribonema minus UTEX_B_3156	exon	Contig_93 44478..44543 +
exon_12015_13	exon_12015_13	Tribonema minus UTEX_B_3156	exon	Contig_93 44663..44728 +
exon_12015_14	exon_12015_14	Tribonema minus UTEX_B_3156	exon	Contig_93 44976..45026 +
exon_12015_15	exon_12015_15	Tribonema minus UTEX_B_3156	exon	Contig_93 45903..46024 +
exon_12015_16	exon_12015_16	Tribonema minus UTEX_B_3156	exon	Contig_93 47596..47698 +
exon_12015_17	exon_12015_17	Tribonema minus UTEX_B_3156	exon	Contig_93 48992..49065 +
exon_12015_18	exon_12015_18	Tribonema minus UTEX_B_3156	exon	Contig_93 50694..50723 +
exon_12015_19	exon_12015_19	Tribonema minus UTEX_B_3156	exon	Contig_93 50843..50896 +
exon_12015_20	exon_12015_20	Tribonema minus UTEX_B_3156	exon	Contig_93 51024..51102 +
exon_12015_21	exon_12015_21	Tribonema minus UTEX_B_3156	exon	Contig_93 51233..51265 +
exon_12015_22	exon_12015_22	Tribonema minus UTEX_B_3156	exon	Contig_93 51377..51409 +
exon_12015_23	exon_12015_23	Tribonema minus UTEX_B_3156	exon	Contig_93 52013..52045 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_12015	CDS_12015	Tribonema minus UTEX_B_3156	CDS	Contig_93 39381..39416 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_93:39381..52045+
coding sequence from alignment at Contig_93:39381..52045+

spliced messenger RNA

>mRNA_12015 ID=mRNA_12015|Name=jgi.p|Trimin1|338718|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1839bp|location=Sequence derived from alignment at Contig_93:39381..52045+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGACAGGGCCGCCCCCCGCGTCCGCGGTGCCAGCAGCGCTCACCGC
CACAACAATGGAGACAGAGCCACCCCCCGCGTCCGCGGCGCCGCCGCCGC
CCGTGCCCACCTCCCCGAAGCCGCCCGCGCCGCCAGCGGAGGCTGCGGAA
ACAGCACCGGAGGTAACGACCACGCCCGCAGCGGCGGTGGAGACGCCGGC
AGCAGCGCCAGCGGCAGCGGCGGAGGCAGCGGCGGAGCCGGAGCCTGCTG
CTGCCGTGAACCCTTACGAGCCGCAGCCGGCGGCGGCGGCGGCGGCGGAG
GCGGAGGGCGCAGCGGGAGATGCGGCGGTGATAGTGGAGGAGCAGGGCTC
CGCAGCGGTGCTCATCCGCGTGCTGCGCGACAGCAGCGGCGGCAGTGGCG
GCGGCGAGCGCCGTGGCGGCAGCGGCGGCTGCGCAGGCCGCGGCAGTGGC
GGCGATCGTCTGTGGGATGACGACGGAATTAGGCCGCAGGCGCAGCTCAT
AGTTTCTTTGACGGCGCAAGGCAACGCGGAGGACCCCGATGACAACAGCG
AAGACGACGGCATTGCCGGCGCCTTCAAGAGCAAGGTCAAGGAGCCCACG
CGCTACGCGCACAAGGACGGCGCGGCGCTGCGCGCGACCAAGCGGGAGGT
CATGGAAGGGGACGGCGCGGCGCTGCGCGTGGCCAAGTGGGAGGTCATGG
AGGGGGACCGCGCGGCGCTGCGTGCGACCAAGAGGGAGGTCATGGATGGG
GACGGCGCAGCGCTGCGCGTGGCCAAGACGGAGGTCATGACGGGGCAAGT
CAACGCGTTCGAGGCCAAGCGCGTCGCGTACTTCAAGTCGCAGACCAGCA
CCAACGTCAGGTACTGGACGGCGCTCAAGGAGATGGCCGGTGAGAGCAAG
GCCAAGGCGGAGCGGCTCGAGATGGCGGGCGAGAGCAAGGCCGAGGCAGA
GCGCCTCGTGGGCTGGTTCAACGGGCGCCTCGCGGCGCAGCGGGCGTATG
CGTGCGCGCTGCTCGACGTCAACGACGAGACGGCCGGCATCAAGAAGGGC
GCCACGCGCACGGCGCTGTTTGGCAAGAGCGCCAGCACGACGCAGACCGC
TGGCATCAAGAAGGGCGCCACGCGCTCTGGGCTGTTCGGCAAGAGCGCCA
GCACGACGCAGACCGCCGCCATCAAGAGGGGCACCACGCGCACCGTGCTC
TTTGGCAAGAGCGCCAGCACGACGCAGACCGCAGGCATTAAGAAGGGCGC
CATGCGCACCATGCTCAGCAAGACGCAGCTGAGCTTCTCCAGCAGGCGCG
GCAGCAGCGGCGCGCTGGGCCAGCTGCCGACGGGCACCGTCATCAAGGGC
GCCGTCGGCGCGGCCGGCGGCAACGGCGAGCTGCAGGACGAGCTGTGCGG
TATGGACGTAACCCAGGCGCAGGAGATCATGGAGCTGATCGTGCTGCTGG
AGGGGACCACGGGCGCAGAGTTGAAGAAGGGCCACATCGACATCTCAACG
CAGGTGGAGATGGTGATCACGGAGGGCAACGACTTCCTCGTGTCGCTGGA
CGCACTGGGACTCTACGTGGACAACGAGGCCGCTGCGGTGACGCTGCACG
AGGACTGGGCCGCCGCGGTGACGCTGGACGAGAACCCGCTGTCGCTGACA
TTAGTTGTGGGGGCCGCCGCGGTGACGCTGGACGAGGACCCGCTGTCGCA
CGGCAAGAAGGCCGCAGCGGCGGCAGCCAAAGTCGCCGAGAAGGCCGCAG
CGGCGGCAGCCAAGGTCGCCGAGCTCGGCAAGAAGGCCGCAGCGGCGGCA
GCCAAGGTGGACTTCTGGCTGCTAGATGCGCGCTACTGA

protein sequence of jgi.p|Trimin1|338718

>Trimin1|338718|MIX47481_2_8 ID=Trimin1|338718|MIX47481_2_8|Name=jgi.p|Trimin1|338718|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=613bp
METGPPPASAVPAALTATTMETEPPPASAAPPPPVPTSPKPPAPPAEAAE
TAPEVTTTPAAAVETPAAAPAAAAEAAAEPEPAAAVNPYEPQPAAAAAAE
AEGAAGDAAVIVEEQGSAAVLIRVLRDSSGGSGGGERRGGSGGCAGRGSG
GDRLWDDDGIRPQAQLIVSLTAQGNAEDPDDNSEDDGIAGAFKSKVKEPT
RYAHKDGAALRATKREVMEGDGAALRVAKWEVMEGDRAALRATKREVMDG
DGAALRVAKTEVMTGQVNAFEAKRVAYFKSQTSTNVRYWTALKEMAGESK
AKAERLEMAGESKAEAERLVGWFNGRLAAQRAYACALLDVNDETAGIKKG
ATRTALFGKSASTTQTAGIKKGATRSGLFGKSASTTQTAAIKRGTTRTVL
FGKSASTTQTAGIKKGAMRTMLSKTQLSFSSRRGSSGALGQLPTGTVIKG
AVGAAGGNGELQDELCGMDVTQAQEIMELIVLLEGTTGAELKKGHIDIST
QVEMVITEGNDFLVSLDALGLYVDNEAAAVTLHEDWAAAVTLDENPLSLT
LVVGAAAVTLDEDPLSHGKKAAAAAAKVAEKAAAAAAKVAELGKKAAAAA
AKVDFWLLDARY*

mRNA from alignment at Contig_93:39381..52045+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_12015 ID=mRNA_12015|Name=jgi.p|Trimin1|338718|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=12665bp|location=Sequence derived from alignment at Contig_93:39381..52045+ (Tribonema minus UTEX_B_3156 )
ATGGAGACAGGGCCGCCCCCCGCGTCCGCGGTGCCAGTCACGAACTTCAC
CTGTGACGCCGCATCACACCAATAACCGCCGTCGCGTTCCCGTTCAACAC
CTACAGATTCACCAGCTCGCAGGTGTAACCTTCTAAAAATCAGTAGATCT
CACGCGTCTGTTCGTCGTGCAGGCAGCGCTGACCTCAACAACAATGGAGA
CAGAGCCGCCCCCCCGCCTGCGCGGCGCCAGTCGCGAACCTCACCTGTGA
CGCCGCATCACGCCAGCTTCACAAACTTCACCTGTAACGCCGCATCACGC
CAGCAAACGCTATCGCGTTCCCGTCCGTCGTGCAGGCAGCGCTCACCGCC
ACAACAATGGAGACAGAGCCACCCCCCGCGTCCGCGGCGCCGCCGCCGCC
CGTGCCCACCTCCCCGAAGCCGCCCGCGCCGCCAGCGGAGGCTGCGGAAA
CAGCACCGGAGGTAACGACCACGCCCGCAGCGGCGGTGGAGACGCCGGCA
GCAGCGCCAGCGGCAGCGGCGGAGGCAGCGGCGGAGCCGGAGCCTGCTGC
TGCCGTGAACCCTTACGAGCCGCAGCCGGCGGCGGCGGCGGCGGCGGAGG
CGGAGGGCGCAGCGGGAGATGCGGCGGTGATAGTGGAGGAGCAGGTGAGG
CGGTGGCGGCTGATGCGCTGCTGTGGATGATGAACATCCAGTTGAAGTTG
CACAGGGCTCCGCAGCGGTGCTCATCCGCGTGCTGCGCGACAGCAGCGGC
GGCAGTGGCGGCGGCGAGCGCCGTGGCGGCAGCGGCGGCTGCGCAGGCCG
CGGCAGTGGCGGCGATCGTCTGTGGGATGACGACGGTTGGGCGCGCGCTC
GGCACACACAGTGCGCGCGCGAACTTGGTCACTATGGGCAGTGCTCGGCA
AAGGCGCGGCTTTAGCAAATCAGCCACAGAGTCCCGCCGCGCAGACCCTA
ACCCTAACCCTAACCCTAAGCATATAATGTAACTGTACATCGCCGCAATG
GTGACCCCGTAATGTATTGATGAAGTAATATAAGCCACGAGAATGAATAA
GGCGCATATCATCGCAGGGTGCAGCCCAGGTGGCCTGCATGGTGGCTGTA
CTTGTCGTGGCGCGCGTCAACTTGTGTACTTTAGAAGTACATCAAAGCAG
TTCAGAAGTACGTAAGCCTGCGCGACTCGCGGCCATCTGTGCGGCGTGCG
TTTGCGCACATGTGAGCTCTGCTGCGCTGCTGCGGTCGCCGCGTCCGCAC
TGCAGAAAATGATGTGTTTTCGACAGTGCAACGAGAGATCAGTGCCTTGT
GTTTGGACTGTAGAATGGGACCACCGGTTCGGGCAGTGTGTACTGCAGGA
ATTAGGCCGCAGGCGCAGCTCATAGTTTCTTTGACGGCGCAAGGCAACGT
AAGACATATACAGCTTTGACACCTACATAACGGTTTCGTGAGGTCTGCGG
TGCTGTGCGGTCGCCCTTCCGACGTGACAAACAAGATGTACATACAATAT
ACAAGATATACTGAGCGGCTGTGATTTCATGTGCACATGTGGTGGCTTCG
TTCGGCAACCGGAGGGGAGAGTACTTGCCGCGGCAGCAGCAACGGAATGC
ACGACTGACAGCGGCCGCGCTGATCATGACGTAGTGCATGTGTGACCTTG
TGATGGTGCACATTTCAATGCCTGAAGTTAAGGCCTTGGAGCTAAGCTGA
TACCCACTTGCAGGCGCTTTGAGGAGCGCACTCGGACCTGACCCTAGACC
TAACCCTACACCGAACCCTAACCCTAACCCTAACCCAAAGATGCCAAGCC
GAGAAACCACATCCCGTTCGCCTGCCAGTCATAAGCGCCCGCAAGCATGC
AACCGCCCGCGCTCCAACGTCCTGAAAACGTCCAACATGCATGTAGGCAC
ACTTCATGCTCGCCAAATGTATTCCGCGAGCGCATCTCGCGTGTACGAAG
AAGCAAGTGGCGACCCTGCAGCAGCAATCACGCAGCGTTTGCTGTGGCGG
GTTGTACTCAATACGCCAATCAATCGACTTTCGCCAATTTCTGAGGTTGC
TTTCACTTCACACGGTGACGTGCCGCCAGGCGGAGGACCCCGATGACAAC
AGCGAAGACGACGGCATTGCCGGCGCCTTCAAGAGCAAGGTCAAGGAGCC
CACGCGCTACGCGCACAAGGACGGCGCGGCGCTGCGCGCGACCAAGCGGG
AGGTCATGGAAGGGGTGAGTACTTCAAGTACTTGAAGTTTTAGCTTTAGA
ACTTCAAGAGCAAGGTCAAAGAGCCCACGCGCTACGCGCACAAGGACGGC
GCGGCGCTGCGCGTGGCCAAGTGGGAGGTCATGGAGGGGGTGAGTACTTC
AAGTACTTGAAGTTTTATGCATGCACTGCTCGCAACTTAGAGGGAGGTAG
GTAGCACTGCTTGCGATCAAGAGGGAGGTGATGGAGGCGGTGAGTACTTG
AAGTACTTGAAGGTTTATGTACGCGCCACGCGCACAAGGACCGCGCGGCG
CTGCGTGCGACCAAGAGGGAGGTCATGGATGGGGTGAGTACTTCCAGTAC
TTGAACTTTTATGCTCGCGCTCAAGTACTCGAAGTCTTGTGCTTGCACTA
CGCGCACGAGGACGGCGCAGCGCTGCGCGTGGCCAAGACGGAGGTCATGA
CGGGGCAAGTACATCAAGTAGTTGAAGGCTGCAAGTGCAGACCGTGATAG
TGGCGCGCTTGTGGATGCGCACGTGCACTGCGATTCGCGCCTCCGCAGTC
GGCGCGCAATTGTGGTGTGGAGTGCGCGGGGGGGGGGGGGGAGAGGGGGA
GGGGTGCACACATGCGGTTTGTGAGGATGTACTTCAAGTAGTTGAAGATC
ACAAACACTGATTGAGAACGAGACGCACCCGCCGACTGGCCCGCGCCCCC
CCTGCGATTCGCCGCGGCAGCCGGTGCACGAATACGGTTTGAAGCACTGA
CGGGAGCGGGGGGCGGGGGGAAAGGGGAGGGGGCGAGGGGTGAGATCATG
CACTTACGCCCAAGTCGCTATCGCAGCAGGTGTGTACGGCGGTGTTCGAT
GGCAACTTTGCGTGTGAGGGGGCTGCGCATCTCATCTCATTGCCGCTGTT
GCTTGTGTCGAGCGCCGCTGCCGTCGTCACGCGCAAAGTGCTGAGCGCTG
ACACGCCGCCGCTCCTCACCTGAGCGTTGCTGCTTGCTAGGCCTACTACT
GCTAATCTCTACTTCCGCTGTGCGGCGCGCATTCCGAGGGCTGATGGCTA
GGGTCAGGTCACGTGCAGTGACAGGGGTAGGCTTAGGGTTGGACCCCTCG
TCTCTGACCGCGCATTCTGTTCTGACCCCCTTAGCCCTACATTGAAGCCC
CAACACTTGATCTATGTAACCCTAATAGAATGCGCAGCAGCGCTCAACAG
CGTGCCGTCCGCAACACGCTCGCGCTTCCCGAGCGCGCTCGCTGCGCTCG
CCACGCACAATGTCCATCAACGAGCGGCGTCGCAGAGGAGCACATTATGT
AGGCTTAAGGTTAGGGTTAGGGTTAGGGTTAGGGTCGGGGTCAGGGTTAG
ATTCAGGGTTTGGGTTAGGGCGAGGAGGCTACGGTTTAGGGTTAGGGTTA
GGGTTAGGTTACCGCCCCGCCTCGCATTGCGCGTGGCAGCAGCATCAGCC
TCATGGCGCGTGCTCTCTTCGACTTCATCGCGTCACCCGAGCGCTGCTGC
CTGCGCTGCGCCGCCATGCAGGTCAACGCGTTCGAGGCCAAGCGCGTCGC
GTACTTCAAGTCGCAGACCAGCACCAACGTCAGGTGGGTGAATGCACGCA
CGTCACGTGCTTCAAGTCCCAGCTTCAGGTCACACAGACCAGCACTGTCA
GATAGATGCGCATGCGCCCACGCGTTGCCTACTTCAAGTTGAAGACCACA
AATGTCACAGGCAGGTAGCATGCACGCGAGACTTGACGTCCCTACTTCAA
GTCACAGACCATCGGCAGGTAGGTGCACAGGCACACGTGCGCCTACTTGC
ACACGAGATCCACCTGGCACTGGGTGTTCCCAACCCTTGACCATAGCGCC
AGTTTTTGTTGGTAGGTGATACAGTAGACTGCAAAACGAGCTGCGTGCAG
TCCAATGTGATGTAAAACGATCGAACTGCCGGGCAGGTGCTTCGCACCCA
CTACCATTATCAAAACAATGCGTGCGCAGCGCTTGCGTGGTTTCCAGGTA
ACCCTAACCCTAACCCTAACCCCGGACAGCGAGAGCAAGGCCGAGTCGGG
GCGGCTTGTGGGCTGGTTCAGCGGCCCTAACTCTGACCCTAGTGCTAGGT
CTCTCTCCGCGCAATCAGCTGCACAGATCACATGATCCTGAGATCATCAC
ACCACCAAAACACACAGAGACAACCTATGCATTGCGCCAGGTACTGGACG
GCGCTCAAGGAGATGGCCGGCGAGAGCAGGGCAGAGACGGGGGCAGGTGC
AAGGCCCTGACCCAAAACCCCACTGCACCGCTAGGTGGTGTCCTGCACAA
CCAGCTGCACATATCACATGATATCAGACCTGTCACACCACCAAAGACAG
AGAGACACTTTGTGTGTGCGGCGCTTGCACGGTCGCTAGGTACTGGACGG
CGCTCAAGGAGATGGCCGGTGAGAGCAAGGCCAAGGCGGAGCGGCTCGTG
GGCTGATTCAACGGGCGTAACTCTAACCCTAGTGCTAGGTCGTTCTCCGC
GCAATCAGCTTCACATGAATCTGAGATCACCACACCACCAAAACACACGG
GGACAACGTATGACACGTGAGTCACGTAATGCGGCACATTGCACCAGGTA
CTGGACGGCCCTGAAGGAGATGGCGGGCGAGAGCAAGGCCGAGGCAGAGC
GCCTCGTGGGCTGGTTCAACGGGCGCCTCGCGGCGCAGCGGGCGTATGCG
TGCGCGCTGCTCGACGTCAACGACGAGACGGCCGGCATCAAGAAGGGCGC
CACGCGCACGGCGCTGTTTGGCAAGAGCGCCAGCACGACGCAGGTGATTT
TGACACGTTTACCATGAATAAGCTGTTGAGAAACATCATATGGAATGTTG
CGTGGTGAAGATGAAGTTTGCGCGGGTGCGTGCGCGTCAACGACGAGACC
GCTGGCATCAAGAAGGGCGCCACGCGCTCTGGGCTGTTCGGCAAGAGCGC
CAGCACGACGCAGGTGATTCTGACACATTCGCCGTGAATGAGCGGTTGAG
AATCGTGTTGAAGTTGGATGTTGCGAGGTGAGGTTGAAGTTTATGCGCAT
GCGCGTGCGCGCTGCTCGACGTCAATGACAAGACCGCCGCCATCAAGAGG
GGCACCACGCGCACCGTGCTCTTTGGCAAGAGCGCCAGCACGACGCAGGT
GGAGAAAGTGTCGTGTTGAAGTTGGCATGTTGTGAGGTGGAGTTAAAGTT
TGCGTGTGCGCGCTGCTCGACGTCAACGACGAGACCGCAGGCATCAAGAA
GGGCGCCACACGCACCGCGCTCTTCGGCAAGAGCGCCAGCACGATGCAGG
CGAGGAAGCTTTTGAAGTATCATGTCATGTTGAAGTTGGCATCAAGGTGA
AGTTGAATTTTGTGCGTGTGCGCGCTGTTTGATGTCAACGACGAGACCGC
AGGCATTAAGAAGGGCGCCATGCGCACCATGCTCAGCAAGACGCAGGTGG
GGAAGCGTGGTGGTGTTGTATGCCATGTTGGCGCATTGTGTGAATGGAAG
TGTATGGAAAGATCGCACGCCCAGCTTTCACAGTGTTGATAAGCTCACCA
GTGAAACATGGGCCCTCTGGGGCTGCGAAGGCGGCTCAGACCGAAACGAA
GGGCAAGCGGCGGCGTGCATTCAATGACGTCAGTTCAGTACCATATGGGC
ACTGCCGCCGTGGCAGCACAGGCCCGATGCTAACGCACCTCTGCCCCTTC
TCCATCAGAGCCCCTCCTCCCCCCCCCATGCTCATTCACTGCACTCCCTC
CATCAAAGCCCCTCCCCCCCCTCCCCTTTGTGCCCCCCCCTCCCCCCTTC
GCCCCCCCCGCTATGTGTCTTGACCACCTACTGCCCTTCCTCCATCAGAG
TCCCCCCCACACACACCTTTTCCCCTTCTGTGGGTGCTGACCATGCAACT
GGCCTTCTTCGTCCCCCCCCCCCCCGCGTGTGCGTCAACTATTCAATTGT
CACGTCCCTCGGGTGCGCCTGCGCAGCTGAGCTTCTCCAGCAGATCATGC
AACTGGCCTTCTCGCTCCCCCCCCCCGCCCCCCACTCGTGTGTCACTGCC
CTTCCTCCATGGGACGCCCCCCCCCCCCCCCCAAACTCCCCGCCCGCCCT
CCTGTGTGTGCTGACATACCACATGCGTGCGGTGCGCCTGCGCAGCTGAG
CTCCTTCCAGCAGGCGCTAACCCTAGCCCCAACCCATGTTGCCCCCCCCC
CCCCCCACACACACACATCTTCCCCCCTTCTGTTGATGCTGATCAATGCA
ACTGACCTCCCCCCCCCCCCCCCCCCGGCATGTGTGTGTCAACTGTCACA
TCCCTCGGGTGCATGTGCGCAGCTGAGCTTCTCCAGCAGGCGCGGCAGCA
GCGGCGCGCTGGGCCAGCTGCCGACGGGCACCGTCATCAAGGGCGCCGTC
GGCGCGGCCGGCGGCAACGGCGAGCTGCAGGACGAGCTGTGCGGGTGAGC
GCTGTGGCCTCTCAAATCAACTACAGTACTTTTTTTTTGAAGTACAACGC
TCAGCATCTGGCATGTTCTGACGCAGATGCGGGGACCGCGGGGGGGCAGT
GATGGCTGTCATGTAACGATGTAATGATCGTGTGCGTACAGGGGCCGTAT
TGCCCGAAAGGTTTCAGTAGTTCAGAGACCGCATGCTCGTGTGGCTCGGC
AACGACAACGCTCAGCAACTGACATTGCCCAACTACAGACGAGTCATTGT
CCGAGCGCAGGGGCTGCATTGGCTGTAACAGTCGTATAGTTGAAATGGCG
TGCGGTCGTGGCTCGGGTGGCAATGGCGCCCTGCAGGACGAGCTCTGCAG
GCGAGCGCTGTAGCCTCTCTAATGAAGTGACAACGCTCAGCAACTGGCAC
TTCTAGAAGTTATTTTGTGCAGCAGATAAGGGGGCCGTCGTCTGACCGCA
GAGGCTGCATTGGCTGCGATGAATCAAAGCTGGCGTGCGGTCGTGGGCGG
CGCAGCAATGGCGAGCTGCAGGACTAGTTGTGCGGGTGAGCGCTGCCGTC
AAATCAGTGACAACGCTCAGCATCTGGCAATTGTGGTGAGGCAGATGAGA
AGGGGGGGCATCGTCCGAGCGCAGGGGCTGCATTGGCTGCGATAAAGTAA
AGATAGCGTGCAGTTTTGGGTCGGGGGGCAACGGCGAGCTGCAGGACGAG
TTATGCGGGTGAGCACTGTGGTCTCTCACATCAGTGACAACGCTAAGCAA
TTAGTGGTTCTTAACCACAGTCTCTTGCATCAGTGACAATGCTCAGCTAC
GGACATATCTCGAGGTGCGAATGAGGGGCCATCGTTCGGAATATGCATCC
ACGTCGCCCGCATCACGGACGTGGCCCAGGCACAAACTAATCCCTGACCC
TGCCATTACCGTAGGTATGGACCCCATTTGCACACAGTCTTCTCATGCAT
GGGCCCTGCATGCGCGTCGTCGTCCGCAGTATGGACGTGACCCAGGCACA
ACCGTGCCATTACCGTAGGTATGGCAGCACCTGTGCCCCGCCTCATTTGC
ACACGCGATTCTCATGCATCTACCCTGCATACGCGTTGTCTGCAGCATGG
ACGTGACCCAGGCACAAACTTGCCATTACCGTAGGTATGGCAGCACCTGT
GCCGCACTCCATTTGCACACACTCTTCTCATGCATCGACCCAGCATGCGC
GTTGTCCGCAGCATAGACGTGACGCAGGCACAACCGTGCCATTGCCATAG
GTATGGCAGCACCCATGCCCCTCTCCATTTGCACACACTCCTCTCATGCA
TGGACCCTGCATGCGTGTCAGCGTCTGCAGCATGGACGTGACCCAGGCAC
AAAATTGCCATAATCGTAGGTATGGCAACACCCGTTTCCCACTCCACTTG
CACACAATGTTCTCATGCATGGACCCTGCACACGCATTATCTGCAGCAGA
AACATGACGCAGGCACAAGATTGCCATAACTGTAAGCGTGGTAGCATCTG
TGCCTCACCCCGTTAGCTATCTTCACTGATGTACCGAATATATGCATGCG
CGTCATCGTCTGCAGTATGGACGTAACCCAGGCGCAGGAGATCATGGAGC
TGATCGTGCTGCTGGAGGGGACCACGGGCGCAGAGTTGAAGAAGGGCCAC
ATCGACATCTCAACGCAGGTACATGGTGGCAGCACCCAAACTTGCTGCCT
GGCGTACTTCATCTTCTTGAAGTTTGCGCCTCTGGACAGTGCTGATCAGT
CATCCATAAAAAAAAGGCGGGCCACGCCGACATCGCAACGCAGGTATGTA
GTGGCAGCGCTCAGCTTGCCGCCTGGCATACTTCATCTACTTGAAGTTTG
CGCCTCTGGACCAGCCTGGTCAGCACTGCTCAGTGACAAACAGAAACAGA
GGAAGGGCCACGCTGACATCTCCACGCAGGAACACAGTGGCAGCGGTCAG
CTTGCTGCCTGGCGTGCTTTTTTGTACTTGAAGTTTGAGCGTCTGGATTG
TGCACGGTCCGGTCAGGCGGTGTACCCTTGTGTTACCAACCAAAAAGAAG
CGGGGTCACGCTGGCATGTCAACAGATTGTGGCAGCGCTCCGCAGCAGCG
CTCAGCTCGCCTGGTGTACGCACTTGGCGGTTATTGCAGTACTTCTGTGC
GATAGCATGGGCGTATATCAGCGCATGCAATGGAGCGTACACTCCGGGCG
AACGGGCTCTGATCTCAGGGTTAGGGTTAGCGTTAGGGTTAGATAAGGTC
AGGCAGGTTGCAGCGCTCGGCTTGCCTGGCGTACTGCACCTACTTGAGCC
TTACTTCCTTGCACAAGTACATAGCAGCGCGGGGCATCTGGCATGCCCTT
CTGAAGGGTTTGCTATGAACAAGATGCGTGCGGTCCGTCTCGTTTGCGTG
CCATCAACTTTCGTGGTTGGTGAATGCTGCTCGTTCATGCGTGAATGATG
GCATACCCCGCCCGCGGTTGCTTGCGCTCTTTTCATGGACGTGAACGTAG
GCCCATCATGGTGGTGAATGTGGGCCCATGCATGGTGGTGAATGTAGGCC
ATACATTCATAGTGGTGAATGTGGGCTCACGATGGAATGTCCACGGTTGC
GTGCGCTCGCACTCGCGCTGTGGATAGATGACGGCTGTGCAAAGCAGCAC
TCTCCGTTACAGTGTCTTTTGTCAGAGATCATGCGCATGAATGGAGGCGC
GTGCGTGAATGAAGCCGCACGCGAGCTCATGAACCGGATGCATTTATGTT
GGTTCTCCACAGCAGTAACCAGTCCGTTACCATCTGTTGCGTCATAAATT
CGTATTCATTGATGAAGGCTCAGTTCATGAATGGACATGCCACGCGCGAC
AGGTGGAGATGGCCATCGCCGAGGGCAAATAAAATTACTTGGTGGGTAAT
GAATTCATTTTCATGAATGAAGGCGCAATTCATGAACCAACACATCGCAC
GCGCTGCGCAGGTGGAGATGGTGATCACGGAGGGCAACGACTTCCTCGTG
TCGCTGGACGCACTGGGACTCTACGTGGACAACGAGTATGACACACTTCG
CCAGTGAGTGACGCTATGTAGCGCCTGGCCATTTCTTTTAGAGCTCGATT
CTCGAGGGGCGGATTTGTTCACTGATTCTAGCCCTAGCCCTGACCCATGC
ATGAATACATCTAGCTGCAGGCAATGACACTGCGAGGTGTCGCAAGCGCT
GCACGTGGACAACGCGTATGTCACACTTCGCCAGTGGGTGACGCTGCGAG
GCGTCAAAATCCAACTTCATGTTGAACAAAGACTTCAATTTTCGATGTTG
TATGTGGACAACGAGTTCAACACGCTGCGAGGTGCCTTAGCGGCTGCTCG
TGAGAGAACAGTTCACGAACCGGTATACAAATTGGTGGCGGTAGCGCCTG
AAGATGTTTTAAGTTCGATTATCGAGGGGCGGATGTGTTCACTAATCCTA
GCCGTAGCCCTCACCCATGCATGAATACATGTATCTGCAGGCACTGACGC
TGCGAGGTGTCACAAGCGCTGCACGTGCACAACGAGTACGACACGCTCGC
CAGTGACGCAGCAATGTGTCAAAACTCCAACTTCATGTCGAACAAGAGCA
ATAATGTTGATGTTGCTCAAATCCATCTTGAGCACCAACTTCACACGTCA
AACACCAATGTCACCTATCACCATCGTGAACACAAAATTCACTTAAGTCA
AACACCAGCTTCACCTGTCAAGTGAGTATAGCAGGTCAAGAACGATCTCA
ATTGTAAGCGCCGCTTGTACGGGGAGGGTTAGCGAACCGATCCACGAATG
CCTCTTGCCTTAGCAGCTTGAGCTGTTTCGAGGTGGATTCTTGAGAGACG
GGTTTGTTCGCCGACCCTACTCGTAGCCCTAACCCCCCATGCGTGAATAT
ACCTACAGGCACTGACGCTGCGAGGCGCTGAAAAGCTCTGTCTGCGAGGG
AAAAACCAGCACATCAATCATGTACACCTCTGGCTGTGGGCACCCTTTTG
CTGATTGCACTCCTTGCAGCAGCAGTCTCCAAGCTGTCCTTTGCGCGATG
ACTGCCTTTCTCGAGACAGCAGTCTCTGGCACGCCGCAAATTTTGCTCAC
CTAGGGTCAGGGTTGGCATCGTCCCCTGTAGGCTACGCAGGACGTGAAAT
TGCGCGCATGTGTGCCGTCATGACACAGCTGTTTTCGAACGTGAGAAAGG
CCGCTACAGATCGTACGAGGGCGAAACGGTCAACATTCATTCCCAGCCCC
TGAACCAGCTTGCGCTTCCGCCCGTAGGCGACTCTCCTGCTGCAGTGCCG
CTGCAGTGACGCTGCGCGAAGGCTGGCGGTGTTCCGCTCACTAGTAGTGG
TAGGGATAATAGCAGTAAACGGGGAACAGGCGTATGGCATAGAATGTGAA
GTTTTTGCGAAAGAGACTTAGGGAGAGAAGCAGCAGCGTGGAGCCATCAC
TTAGTGATTGGCACAGGCCATCAATGCGAGGCACGCAACTGCAGCAGAGC
CGTAGCTGGTAATATTAGTAAATACTTATGTAGTGGCGAGGCTTACAAGA
GTAGATGCGTCAGAAGTAGACAAATCCTGTTGCAGACCCAAATCATGCGC
CATCTTCGCATGTGACTCTTCCGTCGATTGCGCTCACGTCCGCCAGTGAC
GCTCCCGCTGCAGGGCCGCTGCGGTGACGCTGCACGAGGACTGGTGGCAA
TTAGATTTAAGTAGTGGTGGGGTGGGAAGCTCATACCTGAGTGCAGAAGC
TCATGAGCGACGTTGCTGACCCGATGTATGCTCATCCTCCGCATGTGACT
CTCCCGCCGCAGGGCCGCCGCGGTGACGCTGGACGAGAACCCGCTGTCGC
TGACATTAGTTGTGGGGTAGGTCGCTCATATCCACATGTATATGAATGAA
ACCATATGTATCCATAGATGCATATAGTGCTGGCATTTGTTAGCGATGTT
GTTGGTTGATGCTCATCTTCCGCCTGTGACTCTCCCGCTGCAGGGCCGCC
GCGGTGACGCTGGACGAGGACCCGCTGTCGCACGGCAAGAAGGCCGCAGC
GGCGGCAGCCAAAGTCGCCGAGGTATGTGGTATTTTGTGCTCGGTGCCAT
ATATGCTGTTGCCCGTAGTCGACTGCATTGTTTGTGTGCAGAGCAGCAGC
TGACCGAAGGCAGCTGCAAGAAGGATGTAGGTGCACCAGAAATCACGGCG
AGAAGGCCGCAGCGGCGGCAGCCAAGGTCGCCGAGGTATGTATTTTTTGG
TGCTCGGTGCCATGTATGCTGTTGCCGGCAGTCTACTCCGTAGTTTGTGT
GCACAGCAGCTGCTCGAAGGGCAAGTACTCTGAATTACAGTAACAGCTCG
GCAAGAAGGCCGCAGCGGCGGCAGCCAAGGTCGCTGACGTATGTATGTAT
GCAAGGTAATTGCTCGCGCTCGGTGCCATATGCTTTCGCTCACAGTAGAC
TGCAACATTTGCGTGCATCGGTGCACCAACAAGAATCGCAGGATGGCTGC
AGAGGCGGCGGCCAAGGTCGCCGCGGTATTAATTCATGAAGTTACATGTG
AAGTTAGATGTGAAGTTCGAGGCTGCCGTATACCGCGTATGTACTAGCTT
CTCAGGGCGGTGTACGTATATCACAAACGTACGACGTGGAGCCGACTGTA
ATCGGGTTAGGGTTGGGGTTAGGGTTAGGGTTAGGACCCTGCTTGCGCTC
GGTGCCATGTGCTGTTGCCCACGGTCGGCTGCATCATGTGCGCGCACAGC
AGCTGCTCGAAGGGCATGGGTGAATGAAGTACGGTAAACAGCACGGCACG
AAGGCCGCAGCGGCGGCAGCCAAGTAAGAATATTGTCCTGCCTCTTTTAA
CTTCGCAAAATTTCACTGTAAAAATCGATTCCGTTTTAACGGTAGGCTGT
GATTATTTCTAAGCGGAAACTTAATTGGTCTTACAAAGAACCAGGACAAA
TAGACTTAGGCCGCCGCTGCCACCGCACGCAGGTGGACTTCTGGCTGCTA
GATGCGCGCTACTGA

Coding sequence (CDS) from alignment at Contig_93:39381..52045+

>mRNA_12015 ID=mRNA_12015|Name=jgi.p|Trimin1|338718|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1839bp|location=Sequence derived from alignment at Contig_93:39381..52045+ (Tribonema minus UTEX_B_3156 )
ATGGAGACAGGGCCGCCCCCCGCGTCCGCGGTGCCAGCAGCGCTCACCGC
CACAACAATGGAGACAGAGCCACCCCCCGCGTCCGCGGCGCCGCCGCCGC
CCGTGCCCACCTCCCCGAAGCCGCCCGCGCCGCCAGCGGAGGCTGCGGAA
ACAGCACCGGAGGTAACGACCACGCCCGCAGCGGCGGTGGAGACGCCGGC
AGCAGCGCCAGCGGCAGCGGCGGAGGCAGCGGCGGAGCCGGAGCCTGCTG
CTGCCGTGAACCCTTACGAGCCGCAGCCGGCGGCGGCGGCGGCGGCGGAG
GCGGAGGGCGCAGCGGGAGATGCGGCGGTGATAGTGGAGGAGCAGGGCTC
CGCAGCGGTGCTCATCCGCGTGCTGCGCGACAGCAGCGGCGGCAGTGGCG
GCGGCGAGCGCCGTGGCGGCAGCGGCGGCTGCGCAGGCCGCGGCAGTGGC
GGCGATCGTCTGTGGGATGACGACGGAATTAGGCCGCAGGCGCAGCTCAT
AGTTTCTTTGACGGCGCAAGGCAACGCGGAGGACCCCGATGACAACAGCG
AAGACGACGGCATTGCCGGCGCCTTCAAGAGCAAGGTCAAGGAGCCCACG
CGCTACGCGCACAAGGACGGCGCGGCGCTGCGCGCGACCAAGCGGGAGGT
CATGGAAGGGGACGGCGCGGCGCTGCGCGTGGCCAAGTGGGAGGTCATGG
AGGGGGACCGCGCGGCGCTGCGTGCGACCAAGAGGGAGGTCATGGATGGG
GACGGCGCAGCGCTGCGCGTGGCCAAGACGGAGGTCATGACGGGGCAAGT
CAACGCGTTCGAGGCCAAGCGCGTCGCGTACTTCAAGTCGCAGACCAGCA
CCAACGTCAGGTACTGGACGGCGCTCAAGGAGATGGCCGGTGAGAGCAAG
GCCAAGGCGGAGCGGCTCGAGATGGCGGGCGAGAGCAAGGCCGAGGCAGA
GCGCCTCGTGGGCTGGTTCAACGGGCGCCTCGCGGCGCAGCGGGCGTATG
CGTGCGCGCTGCTCGACGTCAACGACGAGACGGCCGGCATCAAGAAGGGC
GCCACGCGCACGGCGCTGTTTGGCAAGAGCGCCAGCACGACGCAGACCGC
TGGCATCAAGAAGGGCGCCACGCGCTCTGGGCTGTTCGGCAAGAGCGCCA
GCACGACGCAGACCGCCGCCATCAAGAGGGGCACCACGCGCACCGTGCTC
TTTGGCAAGAGCGCCAGCACGACGCAGACCGCAGGCATTAAGAAGGGCGC
CATGCGCACCATGCTCAGCAAGACGCAGCTGAGCTTCTCCAGCAGGCGCG
GCAGCAGCGGCGCGCTGGGCCAGCTGCCGACGGGCACCGTCATCAAGGGC
GCCGTCGGCGCGGCCGGCGGCAACGGCGAGCTGCAGGACGAGCTGTGCGG
TATGGACGTAACCCAGGCGCAGGAGATCATGGAGCTGATCGTGCTGCTGG
AGGGGACCACGGGCGCAGAGTTGAAGAAGGGCCACATCGACATCTCAACG
CAGGTGGAGATGGTGATCACGGAGGGCAACGACTTCCTCGTGTCGCTGGA
CGCACTGGGACTCTACGTGGACAACGAGGCCGCTGCGGTGACGCTGCACG
AGGACTGGGCCGCCGCGGTGACGCTGGACGAGAACCCGCTGTCGCTGACA
TTAGTTGTGGGGGCCGCCGCGGTGACGCTGGACGAGGACCCGCTGTCGCA
CGGCAAGAAGGCCGCAGCGGCGGCAGCCAAAGTCGCCGAGAAGGCCGCAG
CGGCGGCAGCCAAGGTCGCCGAGCTCGGCAAGAAGGCCGCAGCGGCGGCA
GCCAAGGTGGACTTCTGGCTGCTAGATGCGCGCTACTGA