mRNA_11927 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|153927 vs. uniprot
Match: A0A835ZDI3_9STRA (Quinon protein alcohol dehydrogenase-like superfamily (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDI3_9STRA) HSP 1 Score: 760 bits (1963), Expect = 6.210e-277 Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 1
Query: 1 MRVLTADETGLVKVWQVESRKLLVTHGLGHQSRVRGVRGLCWGLASDGTSPDYSRVHVGRENGVVEDWSVSHTAAKGKKLPASATVNQRSQREGCPASIVSLHALPGTASEADSPPTMVACSATGEVRVAPCDAAAGEGSSFKAPAPVHTAIGRGGVLATGGQDNDIKVWDVATGQCTWRAKNVPMDAKLQLSVPVWPSALAPLRAAHEDPALTALLAGTAHRHIRLYDTRAARRPRQTIDYGEHRITALCVIGGGGGSAHTAIVGDAAGELTALDLRALRRRRRYGEPGGGAVRAFAVHPTLPVFAAVGLDRVCRVYDVSGGXXXXXAPLAALYLKQRASRVLFCDEGRATPDGAIDRAAAALEGGDDGWGSAEEYEMGAGSSEEGDAEESEMESEGD 1197
MRVLTADETGLVKVWQVESRKLLVTHGLGHQSRVRGVRGLCWGLASDGTSPDYSRVHVGRENGVVEDWSVSHTAAKGKKLPASATVNQRSQREGCPASIVSLHALPGTASEADSPPTMVACSATGEVRVAPCDAAAGEGSSFKAPAPVHTAIGRGGVLATGGQDNDIKVWDVATGQCTWRAKNVPMDAKLQLSVPVWPSALAPLRAAHEDPALTALLAGTAHRHIRLYDTRAARRPRQTIDYGEHRITALCVIGGGGGSAHTAIVGDAAGELTALDLRALRRRRRYGEPGGGAVRAFAVHPTLPVFAAVGLDRVCRVYDVSGGXXXXXAPLAALYLKQRASRVLFCDEGRATPDGAIDRAAAALEGGDDGWGSAEEYEMGAGSSEEGDAEESEMESEGD
Sbjct: 1 MRVLTADETGLVKVWQVESRKLLVTHGLGHQSRVRGVRGLCWGLASDGTSPDYSRVHVGRENGVVEDWSVSHTAAKGKKLPASATVNQRSQREGCPASIVSLHALPGTASEADSPPTMVACSATGEVRVAPCDAAAGEGSSFKAPAPVHTAIGRGGVLATGGQDNDIKVWDVATGQCTWRAKNVPMDAKLQLSVPVWPSALAPLRAAHEDPALTALLAGTAHRHIRLYDTRAARRPRQTIDYGEHRITALCVIGGGGGSAHTAIVGDAAGELTALDLRALRRRRRYGEPGGGAVRAFAVHPTLPVFAAVGLDRVCRVYDVSGGXXXXXAPLAALYLKQRASRVLFCDEGRATPDGAIDRAAAALEGGDDGWGSAEEYEMGAGSSEEGDAEESEMESEGD 399
BLAST of jgi.p|Trimin1|153927 vs. uniprot
Match: D8LFI9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFI9_ECTSI) HSP 1 Score: 226 bits (576), Expect = 1.270e-65 Identity = 160/409 (39.12%), Postives = 214/409 (52.32%), Query Frame = 1
Query: 1 MRVLTADETGLVKVWQVESRKLLVTHGLGHQSRVRGVRGLCWGLASDGTSPD------YSRVHVGRENGVVEDWSVSHTAAKGKKLPASATVNQRSQREGCPASIVSLHALPGTASEADSPPTMVACSATGEVRVAPC-------DAAAGEGSSFKAPAPVHTAIGRGG---VLATGGQDNDIKVWDVATGQCTWRAKNVPMDAKLQLSVPVWPSALAPLRAAHEDPA-LTALLAGTAHRHIRLYDTRAARRPRQTIDYGEHRITALCVIGGGGGSAHTAIVGDAAGELTALDLRALRRRRRYGEPGGGAVRAFAVHPTLPVFAAVGLDRVCRVYDVSGGXXXXXAPLAALYLKQRASRVLFCDE------------GRATPDGAIDRAAAALE-GGDDGWGSAEEYEM 1137
MR++TADETGLVKV ++ES + L G Q+R VR +C+ A+ S ++R+HV R G VE W VS + G+ ++ R C A+ V+L LP +S + ++ C+ GEV+V+ D A S + P A G GG LA GG++ND+K WD+ TG+CTW+AKNVP D L + PVW ++L PL AA L ++AGTAHR +RLYD RA +RP ++D EH +T + V G +V D AG + LDLR ++ RR+ P G +VR A HPTLPV A VGLDR+ RVY +YLKQR + VLF E G GA D A A + G +GWGS EEYEM
Sbjct: 1 MRIITADETGLVKVVRLESGECLAVSA-GEQARANAVRAVCFDHAAPAASRHRASDDFFARIHVARAAGAVETWDVSQSERDGQT--GGCALSARGTAVECAAAPVALACLPPASSSSSESSRVLTCNGEGEVQVSRAAPDGRSNDEAERTTLSIRGPVSAAVADGDGGSGLALAAGGKENDLKTWDLGTGKCTWKAKNVPHDF-LDMRQPVWITSLCPLAAATGGGGGLQQMVAGTAHRQVRLYDARAQKRPTHSVDADEHGVTTMAVAPDG----REVVVADTAGLVRVLDLRKMKWGRRFEGPAG-SVRGLAFHPTLPVLACVGLDRMARVYGYHSREQKFQ-----VYLKQRLNAVLFDGEEGEVQVAADGEDGEKKKSGAKDGAGAGEDWSGSEGWGSGEEYEM 395
BLAST of jgi.p|Trimin1|153927 vs. uniprot
Match: A0A2D4BHJ4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BHJ4_PYTIN) HSP 1 Score: 146 bits (368), Expect = 2.560e-36 Identity = 130/377 (34.48%), Postives = 170/377 (45.09%), Query Frame = 1
Query: 1 MRVLTADETGLVKVWQVESRKLLVTHGLGHQ--SRVRGVRGLCWGLASDGTSPDYSRVHVGRENGVVEDWSVSHTAAKGKKLPASATVNQRSQREGCPASIVSLHALPGTASEADSPPTMVACSATGEVRVAPCDAAAGEGSSFKAP-----------APVHTAIGRGGVLATGGQDNDIKVWDVATGQCTWRAKNVPMDAKLQLSVPVWPSALAPLRAAHEDPALTALLAGTAHRHIRLYDTRAARRPRQTIDYGEHRITALCVIGGGGGSAHTAIVGDAAGELTALDLRALRRRRRYGEPGGGAVRAFAVHPTLPVFAAVGLDRVCRVYDVSGGXXXXXAPLAALYLKQRASRVLFCDEGR----ATPDGAIDRA 1080
MRV+ ADETGL+K ++E + V G HQ R R + +CW + S V V R + VVE + H A+ A V R G ++V C+A G+V V AG+ S+F A A H +ATGG++ D+ VW + + ++AKNV D KL + VPVW L L ++ GT H HIRLYDT RRP I++GE+ I ALCV D G + DLR LR R P G AVR A HPTLP AAVGLDR V+DV+ +++Y KQR + VLFC++G AT DG RA
Sbjct: 1 MRVIVADETGLLKSIELEKNEQRVI-GNRHQPQGRERAIERICWYQDENQDSSARDSVVVARASSVVELYRADHAASDELSRERQADVG----RYG----------------------SVVHCTAAGDVLVRNSLREAGKPSTFSAGPDLERMRLDPFAQTH--------IATGGKERDLNVWSLERQEAVFKAKNVTHD-KLDMRVPVWVKDLQFLSTPGSSNGHRVVV-GTGHHHIRLYDTNTKRRPVLQIEHGEYPINALCV----SPDETRVFAADTTGCVDVFDLRTLRHMGRCIGPNG-AVRDLACHPTLPFVAAVGLDRFVHVFDVNTRQYH-----SSIYAKQRLNAVLFCNDGAKAFAATDDGEDGRA 330
BLAST of jgi.p|Trimin1|153927 vs. uniprot
Match: A0A6G0XIB0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIB0_9STRA) HSP 1 Score: 144 bits (364), Expect = 5.480e-36 Identity = 127/352 (36.08%), Postives = 170/352 (48.30%), Query Frame = 1
Query: 1 MRVLTADETGLVKVWQVESRKLLVTHGLGHQSRVRGVRGLCWGLASDGTSPDYSRVHVGRENGVVEDWSVSHTAAKGKKLPASATVNQRSQREGCPASIVSLHALPGTASEADSPPTMVACSATGEVRVAPCDAAAGEGSSFKAPAPVHTA-IGRGG--VLATGGQDNDIKVWDVATGQCTWRAKNVPMDAKLQLSVPVWPSALAPLRAAHEDPALTALLAGTAHRHIRLYDTRAARRPRQTIDYGEHRITALCVIGGGGGSAHTAIVGDAAGELTALDLRALRRRRRYGEPGGGAVRAFAVHPTLPVFAAVGLDRVCRVYDVSGGXXXXXAPLAALYLKQRASRVLFCDEG 1047
MRV+ DETGLVK +E+ + G QSR R L W T D V V R NG V+ + A+ P S T REG P + G SE S +V C+ G V V SF + T + G V+A GG++ D+ +W++ T Q ++AKN+P D L + VPVW A+A L +A++ L GTA+ IR+YDT+ RRP +GEH IT+L V + I GD AG + ALDLR + RY P G ++R A+HP+LP AAVGLDR+ V+ V + Y KQR + VLF DEG
Sbjct: 1 MRVIVGDETGLVKNISLEASSAQLLSG-SSQSRATSARYLAW------TDND---VVVARMNGHVDCVDIHGGAS-----PWSFT------REGSPVGL-------GVISEYGS---IVRCNTAGRVEVVHPLHLKPNPPSFDVGHDIQTLRVDPFGSHVIAIGGKERDVNLWNLETQQAIFKAKNIPHD-NLDMRVPVWVKAMAFLPSANDGHHLAV---GTAYHQIRIYDTKTKRRPVSEASFGEHPITSLVV------HENRVIFGDTAGNVNALDLRTFKHLGRYHGPVG-SIRDIALHPSLPYMAAVGLDRMVHVFHVD-----TRKAVHTYYAKQRLNAVLFTDEG 305
BLAST of jgi.p|Trimin1|153927 vs. uniprot
Match: A0A485L5S9_9STRA (Aste57867_16148 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L5S9_9STRA) HSP 1 Score: 144 bits (364), Expect = 5.950e-36 Identity = 122/352 (34.66%), Postives = 169/352 (48.01%), Query Frame = 1
Query: 1 MRVLTADETGLVKVWQVESRKLLVTHGLGHQSRVRGVRGLCWGLASDGTSPDYSRVHVGRENGVVEDWSVSHTAAKGKKLPASATVNQRSQREGCPASIVSLHALPGTASEADSPPTMVACSATGEVRVAPCDAAAGEGSSFKAPAPVHTA-IGRGG--VLATGGQDNDIKVWDVATGQCTWRAKNVPMDAKLQLSVPVWPSALAPLRAAHEDPALTALLAGTAHRHIRLYDTRAARRPRQTIDYGEHRITALCVIGGGGGSAHTAIVGDAAGELTALDLRALRRRRRYGEPGGGAVRAFAVHPTLPVFAAVGLDRVCRVYDVSGGXXXXXAPLAALYLKQRASRVLFCDEG 1047
MRV+ ADETGLVK +E+ + G Q+R R L W S V VGR NG V+ +++ + P S T R+G P + G +E S +V C+ G V V SF+ +HT + G V+ GG++ D+ +W++ T ++AKN+ D L + VPVW ALA L D + ++ GTA+ IR+YDT RRP +G+H IT+L V H I GD AG + A+D+R + RY P G ++R A+HPTLP AAVGLDR+ VY V + Y KQR + VLF DEG
Sbjct: 1 MRVVIADETGLVKNVALEASTAELLSGPS-QNRATSARHLSW---------SESDVVVGRVNGAVDCHALNGAS------PWSFT------RDGSPVGL-------GVVAEFGS---IVRCNTAGRVEVVHPLHVKPNPPSFEVGHDIHTMRVDPFGSHVIGIGGKERDLNLWNLETQTAVFKAKNITHD-NLDMRVPVWVKALAFLPRPASDSSGHRVVVGTAYHQIRIYDTNTKRRPVSETTFGDHPITSLVV------QDHRIIFGDTAGNVNAIDMRTFKHLGRYHGPVG-SIRDIALHPTLPYMAAVGLDRMVHVYHVE-----TRKNVHTYYAKQRLNAVLFTDEG 307
BLAST of jgi.p|Trimin1|153927 vs. uniprot
Match: A0A024TXS7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TXS7_9STRA) HSP 1 Score: 144 bits (362), Expect = 9.770e-36 Identity = 129/372 (34.68%), Postives = 175/372 (47.04%), Query Frame = 1
Query: 1 MRVLTADETGLVKVWQVESRKLLVTHGLGHQSRVRGVRGLCWGLASDGTSPDYSRVHVGRENGVVEDWSVSHTAAKGKKLPASATVNQRSQREGCPASIVSLHALPGTASEADSPPTMVACSATGEVRVAPCDAAAGEGSSFKAPAPVHTAIGR---GGVLATGGQDNDIKVWDVATGQCTWRAKNVPMDAKLQLSVPVWPSA---LAPLRAAHEDPALTALLAGTAHRHIRLYDTRAARRPRQTIDYGEHRITALCVIGGGGGSAHTAIVGDAAGELTALDLRALRRRRRYGEPGGGAVRAFAVHPTLPVFAAVGLDRVCRVYDVSGGXXXXXAPLAALYLKQRASRVLFCDEG-RATPDGAIDRAAAALE 1095
MRV+ DETGLVK +E+ + G Q R + R L W SD V V R NG V+ ++ + P S T REG P + G +E S +V C+ G V V +F +HT V+A GG++ D+ VWD+ T Q ++AKNV D L + VPVW A L P AA + L+ GTA+ IR+YDT A RRP +GEH IT+L V H + GD AG + A+D+R + RY P G ++R A+HPTLP A+VGLDR+ V+ + + Y KQR + VLF DEG +A P A+ A +E
Sbjct: 1 MRVIVGDETGLVKNVALEAATATMLTGTA-QGRSKSARYLAW---SD------KDVVVARTNGDVDCVGINGGS------PWSFT------REGSPVGM-------GVVAEYGS---IVRCNTAGRVEVVHPLHVKPNPPAFNVGNDIHTLRVNPYASNVIAIGGKERDMNVWDLQTQQAVFKAKNVTHD-NLDMRVPVWVKAITFLPPTSAAGGSESGHRLVVGTAYHQIRIYDTSAKRRPVLETSFGEHPITSLVV------QDHRVMFGDTAGNVNAIDMRTFKHLGRYHGPVG-SIRDMALHPTLPYVASVGLDRMVHVHHIEA-----RKAVHTYYAKQRLNAVLFTDEGVKAAPIAAVPAAEDVVE 327
BLAST of jgi.p|Trimin1|153927 vs. uniprot
Match: D8LW75_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LW75_BLAHO) HSP 1 Score: 139 bits (351), Expect = 2.590e-34 Identity = 115/351 (32.76%), Postives = 174/351 (49.57%), Query Frame = 1
Query: 1 MRVLTADETGLVKVWQVESRKLLVTHGLGHQSRVRGVRGLCWGLASDGTSPDYSRVHVGRENGVVEDWSVSHTAAKGKKLPASATVNQRSQREGCPASIVSLHALPGTASEADSPPTMVACSATGEVRVAPC-DAAAGEGSSFKAP-APVHTAIGRGGVLATGGQDNDIKVWDVATGQCTWRAKNVPMDAKLQLSVPVWPSALAPLRAAHEDPALTALLAGTAHRHIRLYDTRAARRPRQTIDYGEHRITALCVIGGGGGSAHTAIVGDAAGELTALDLRALRRRRRYGEPGGGAVRAFAVHPTLPVFAAVGLDRVCRVYDVSGGXXXXXAPLAALYLKQRASRVLFCDEG 1047
MR++TADETGL+K +E++++ G QSR V + W S + + V V NG V+ W V T V + S EG P + + +E D ++ C+ G+V + DA + K P A +H + A GG++ND+ ++D+ T + ++A+NVP D LQL VP+W + ++ H + L T H H+RLYDTRA RRP Q+++ G T C + S T GD G ++ +DLR ++ Y + G+VR A+HPT+ V A VGLDRV RV+DV+ L +YL+Q+ + VL EG
Sbjct: 1 MRIITADETGLIKQILIENKRI---QRWGTQSRDNSVERMVWAGMS---GCEENEVAVALVNGRVQVWDVDKTVI----------VKEFSGIEGIPRGLGVIR------NEEDR--KVITCTDDGKVNLYNWKDAEIVKTFDVKGPIANMHLCPSNNQIFAVGGRENDLALYDIETEEPVFKARNVPNDW-LQLRVPIW---VTDMKFLHPKSSGFELAVVTGHHHVRLYDTRAKRRPVQSVEIGSRPFT-CCTVSHDENSLFT---GDTIGRVSRIDLRTMQLNGVY-KGNTGSVREIALHPTMEVMATVGLDRVMRVFDVA-----TRQQLHRVYLRQKLNCVLVSSEG 313
BLAST of jgi.p|Trimin1|153927 vs. uniprot
Match: A0A1V9YET1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YET1_9STRA) HSP 1 Score: 135 bits (341), Expect = 8.940e-33 Identity = 120/353 (33.99%), Postives = 160/353 (45.33%), Query Frame = 1
Query: 1 MRVLTADETGLVKVWQVESRKLLVTHGLGHQSRVRGVRGLCWGLASDGTSPDYSRVHVGRENGVVEDWSVSHTAAKGKKLPASATVNQRSQREGCPASIVSLHALPGTASEADSPPTMVACSATGEVRVAPCDAAAGEGSSFKAPAPVHTAIG---RGGVLATGGQDNDIKVWDVATGQCTWRAKNVPMDAKLQLSVPVWPSALA--PLRAAHEDPALTALLAGTAHRHIRLYDTRAARRPRQTIDYGEHRITALCVIGGGGGSAHTAIVGDAAGELTALDLRALRRRRRYGEPGGGAVRAFAVHPTLPVFAAVGLDRVCRVYDVSGGXXXXXAPLAALYLKQRASRVLFCDE 1044
MRV+ DETGLVK +E+ V G QSR G + L W D V + R NG V+ AA G P + + +G P V + LP S +V C+ G V V ++F +HT ++A GG++ D+ +WD+ T T++AKNV D L + VPVW A+ P H L+ GT H +R+YDT RRP Q +GE ITA+ V + I D AG + ALDLR + RY P G ++R A+HPTLP AAVGLDR+ VY + Y KQR + VLF DE
Sbjct: 1 MRVIIGDETGLVKSVGLEAGTAQVLGAPG-QSRATGAKYLAWTADKD--------VVIARANGRVDC-----VAADGADAPWTFS------SQGAP---VGMGVLPEFGS-------IVRCNVEGRVEVVHPLNIKPNPAAFSVGQDIHTLRVDPLSSNIIAIGGKERDLNLWDLETQTATFKAKNVTHD-NLDMRVPVWVKAIEFLPPSGGHR------LVVGTGHHQVRIYDTNTKRRPVQETSFGELPITAIAV------KDNRVIFSDTAGNINALDLRNFKHLGRYHGPVG-SIRDIALHPTLPYMAAVGLDRMVHVYHTE-----TRKNVHTYYAKQRLNAVLFTDE 304
BLAST of jgi.p|Trimin1|153927 vs. uniprot
Match: M4BCG2_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BCG2_HYAAE) HSP 1 Score: 136 bits (343), Expect = 1.040e-32 Identity = 123/368 (33.42%), Postives = 175/368 (47.55%), Query Frame = 1
Query: 1 MRVLTADETGLVKVWQVE-SRKLLVTHGLGHQSRVRGVRGLCWGLASDGTSPDYSRVHVGRENGVVEDWSVSHTAAKGKKLPASATVN---QRSQREGCPASIVSLHALPGTASEADSPPTMVACSATGEVRVA-----PCDAAA--------GEGSSFKAPAPVHTAIGRGGVLATGGQDNDIKVWDVATGQCTWRAKNVPMDAKLQLSVPVWPSALAPLRAAHEDPALTALLAGTAHRHIRLYDTRAARRPRQTID-YGEHRITALCVIGGGGGSAHTAI-VGDAAGELTALDLRALRRRRRYGEPGGGAVRAFAVHPTLPVFAAVGLDRVCRVYDVSGGXXXXXAPLAALYLKQRASRVLFCDEG 1047
MRVL ADETGL+K ++E S + +++ Q+R RG++ LCW V + R NG VE + SH GK L S +E V L + S +V CS TG+V V DA GE + + + T IG GG+++D+ +W + T Q ++AKNV + KL + VPVW L L ++ G+ ++ +R+YD+ RRP Q ++ +GEH I +LCV T I VGD AG L LDLR L+ R P G ++R + HPTLP AAVGLDR+ V+DV+ +Y KQR + +LFC +G
Sbjct: 1 MRVLVADETGLLKSIELEKSEQYILSSRKQPQARARGIQRLCWYANEQQAVNGQQNVVLARANGCVESYETSH----GKILNVSKEPEWSWPMQDKEQDKTRCVGLEVIRKWGS-------VVQCSDTGDVVVRRMLQDTTDATVERKQFSVGGELNIMRLEPALQTVIG------VGGKEHDLNLWSLETQQVLFKAKNVTHN-KLDMRVPVWVKDLRFLSTPGSSNGYRVVV-GSGYQCVRIYDSNTKRRPVQELEKFGEHPIQSLCV-----SPDETRIYVGDTAGNLDILDLRTLKHMGRCTGPIG-SIRDISCHPTLPYIAAVGLDRMVHVFDVNTRKHRH-----VIYAKQRLNCLLFCADG 338
BLAST of jgi.p|Trimin1|153927 vs. uniprot
Match: W4G1J7_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1J7_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.180e-30 Identity = 126/368 (34.24%), Postives = 169/368 (45.92%), Query Frame = 1
Query: 1 MRVLTADETGLVKVWQVESRKLLVTHGLGHQSRVRGVRGLCWGLASDGTSPDYSRVHVGRENGVVEDWSVSHTAAKGKKLPASATVNQRSQREGCPASIVSLHALPGTASEADSPPTMVACSATGEVRVAPCDAAAGEGSSFKAPAPVHTAIGR---GGVLATGGQDNDIKVWDVATGQCTWRAKNVPMDAKLQLSVPVWPSALA--PLRAAHEDPALTALLAGTAHRHIRLYDTRAARRPRQTIDYGEHRITALCVIGGGGGSAHTAIVGDAAGELTALDLRALRRRRRYGEPGGGAVRAFAVHPTLPVFAAVGLDRVCRVYDVSGGXXXXXAPLAALYLKQRASRVLFCDEG-RATPDGAIDRAAA 1086
MRV+ ADETGLVK VE+ V G QSR R L W V V R NG V+ V H + P S T REG P + G +E S +V C+ G V V SF + T V+ GG++ D +WD+ T + ++AKN+ D L + VPVW A+ P +A L+ GTA+ IR+YDT A RRP +G+ ITA+ V G + I GD AG + A+D+R + RY P G ++R A+HPTLP A+VGLDR+ V+ V + Y KQR + VLF DEG +A P + +A A
Sbjct: 1 MRVIIADETGLVKNVAVEAATATVLAGTA-QSRSTSARYLAWSEKD---------VVVARTNGDVDCVGV-HGGS-----PWSFT------REGSPVGM-------GVIAEYGS---IVRCNTAGHVEVVHPLHVKPNPPSFNVGNDIQTLRVNPFASNVIGIGGKERDANLWDLQTQKAIFKAKNITHD-NLDMRVPVWVKAMTFLPPTSAAGGSEGHRLVVGTAYHQIRIYDTSAKRRPVSETSFGDLPITAVLVQG------NRVIFGDTAGNVNAIDMRTFKHLGRYHGPVG-SIRDLALHPTLPYVASVGLDRMVHVHHVE-----TRKAVHTYYAKQRLNAVLFTDEGIKAAPVAPVVKAEA 323 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|153927 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11927 ID=mRNA_11927|Name=jgi.p|Trimin1|153927|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1197bp|location=Sequence derived from alignment at Contig_111:499814..501010- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCGTGTGTTGACGGCAGACGAGACAGGCCTCGTCAAAGTTTGGCAGGTback to top protein sequence of jgi.p|Trimin1|153927 >Trimin1|153927|gw1.111.89.1 ID=Trimin1|153927|gw1.111.89.1|Name=jgi.p|Trimin1|153927|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=399bp MRVLTADETGLVKVWQVESRKLLVTHGLGHQSRVRGVRGLCWGLASDGTSback to top mRNA from alignment at Contig_111:499814..501010- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11927 ID=mRNA_11927|Name=jgi.p|Trimin1|153927|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1197bp|location=Sequence derived from alignment at Contig_111:499814..501010- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_111:499814..501010- >mRNA_11927 ID=mRNA_11927|Name=jgi.p|Trimin1|153927|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1197bp|location=Sequence derived from alignment at Contig_111:499814..501010- (Tribonema minus UTEX_B_3156 )back to top |