mRNA_11841 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|151331 vs. uniprot
Match: A0A835ZPJ6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPJ6_9STRA) HSP 1 Score: 662 bits (1709), Expect = 2.560e-240 Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 1 Query: 1 IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFANGYWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLRRCKANLLVPATQDSTGSPSRSDRLFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPSSRRVVGWLLVALNVALITAAVFQTLVSVAKPG 1011 IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFANGYWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLRRCKANLLVPATQDSTGSPSRSDRLFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPSSRRVVGWLLVALNVALITAAVFQTLVSVAKPG Sbjct: 1 IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFANGYWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLRRCKANLLVPATQDSTGSPSRSDRLFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPSSRRVVGWLLVALNVALITAAVFQTLVSVAKPG 337
BLAST of jgi.p|Trimin1|151331 vs. uniprot
Match: A0A835YJS2_9STRA (TRP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJS2_9STRA) HSP 1 Score: 316 bits (810), Expect = 1.490e-102 Identity = 165/330 (50.00%), Postives = 226/330 (68.48%), Query Frame = 1 Query: 1 IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFANGYWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLR-RCKANLLVPATQDSTGSPSRSDRLFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPSSRRVVGWLLVALNVALITAAVFQT 987 +V QLL GF+ +TGLA P+ Y + ++F +D T+++GC+A+L+FY KLLA TLAPL + L+G SWL A ++ + G AA L +ALRRHWT FL FL FG VSSVVF TF CE + YLRADYS+QC+ + YW YA YA + VYPIGI AL++VL+W+K KL+ K N + S + RL EASGFLWEQY + +W++ EC RRLL+TGF+AF+LPG QA + ML++F L+A+++ RPHR+R+ +WQY+ GA+I+YLST +ALL +LD + EP S+ +VG +L+ L+VA+I AAVFQT Sbjct: 48 VVFQLLWGFMEVTGLAYPQVYATMIAYISFASDLTLVLGCVAELNFYQKLLAMTLAPLAVVVLLGASWLLACWRAQQLQRSDGFEAAYLMHQEALRRHWTAFLAFTFLVFGVVSSVVFLTFVCEELD-----YLRADYSVQCYTSEYWAYAVYAAVMLFVYPIGITALYSVLLWRKSKLKMNNKGNSKIVRV----ASLAPRSRLVEASGFLWEQYTEETPWWEIAECVRRLLITGFVAFILPGTVSQAVVGMLMAFASLMAYLMVRPHRDRRTYWQYITGALILYLSTMSALLQ--KLDIAKEPQSQAIVGIVLIVLSVAMIAAAVFQT 366
BLAST of jgi.p|Trimin1|151331 vs. uniprot
Match: A0A835Z836_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z836_9STRA) HSP 1 Score: 297 bits (761), Expect = 1.320e-95 Identity = 163/332 (49.10%), Postives = 223/332 (67.17%), Query Frame = 1 Query: 10 QLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFANG-YWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLRRCKANLLVPATQDSTGSPSRSDRLFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPSSRRVVGWLLVALNVALITAAVFQTLVSVA 1002 QL+ GF+ +TGL L +E F+ KLA + + + GC+ + FY+KLLA TL PL+ +AL+GCSWL A R R AG AA+ A L ALR+HWT FL + FL +G+VSS++F+TFAC++ +EL +YLRADYSIQC+ N YW Y AYA +VYP+G+PAL+A+L+ KR+ + + V A G D L AS FLW QYK +AE+W++ ECARR++LTG + F+LPG AGQAA+S+L +F L L FM RPHRE + QYLLGAVI+Y ++ ALLI ++ + S+ VVG +++ ++ ALI AAV QTL VA Sbjct: 23 QLVAGFLEVTGLQLAPTFENFIHKLAILPNLSFAWGCVYNATFYEKLLAMTLGPLVAVALLGCSWLWAVAREHRLRRVAGADAARAARLKALRKHWTAFLALTFLVYGTVSSIIFQTFACDYMQELDTYYLRADYSIQCYNNSEYWRYFAYAMTMFVVYPLGVPALYALLLCFKRRQHQARQGA-VAAAPSVQGLEPHWD-LVHASSFLWAQYKPKAEWWEMVECARRVVLTGVLVFILPGSAGQAAVSVLFAFLLTLIFMAVRPHREHAMQRQYLLGAVIVYFASMNALLIKSQVSGAQ---SQLVVGIVMIIISTALIVAAVAQTLYGVA 349
BLAST of jgi.p|Trimin1|151331 vs. uniprot
Match: A0A835ZA22_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA22_9STRA) HSP 1 Score: 274 bits (700), Expect = 6.390e-87 Identity = 143/292 (48.97%), Postives = 198/292 (67.81%), Query Frame = 1 Query: 10 QLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFAN-GYWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLRRCKANLLVPATQDSTGSPSRSDRLFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLI 882 QL+ GF+ +TGL L A+E F+ KLA + + + GC+ + FY++LL TL PL+ +AL+GCSWL A R + AG AA+ L ALR+HWT FL + FL +G+VSS +F+TFAC++ +EL +YLRADYSIQC+ N YW Y AYA +VYP+G+PAL+A+L+ +R+ + LV A +P+ L AS FLW QYK +AE+W++ ECARR++LTG + F+LPG AGQAA+S+L +F L L FM RP+RE + QYLLGAVI+Y ++ ALLI Sbjct: 10 QLVAGFLEVTGLQLAPAFENFIHKLATLLNLSFAWGCVYNATFYEQLLVMTLGPLVAVALLGCSWLWALVREHRVQRVAGADAARAVRLKALRKHWTAFLALTFLVYGTVSSTIFQTFACDYVQELDTYYLRADYSIQCYNNLEYWRYFAYAMTMFVVYPLGVPALYALLLCSRRRQQHQAQQGLVAA------APNSHWDLVHASSFLWAQYKPEAEWWEIVECARRVVLTGVLVFILPGSAGQAAVSVLFAFFLALMFMAVRPYREHTMQRQYLLGAVIVYFASMNALLI 295
BLAST of jgi.p|Trimin1|151331 vs. uniprot
Match: A0A835ZGE0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGE0_9STRA) HSP 1 Score: 279 bits (714), Expect = 2.100e-82 Identity = 162/369 (43.90%), Postives = 216/369 (58.54%), Query Frame = 1 Query: 1 IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWL--AAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFANGYWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLRR--------CKANLLVPATQDSTGSPSRSDR------------------------------LFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPSSRRVVGWLLVALNVALITAAVFQT 987 IVVQL+ GF++ITGL L +E F+ +LA I DFT + GCI +FY KLL TLAPL+ +AL+GCSWL ++ A ALR+HWT L FL +G+ SS +F+TFAC EEL E YLRADYSI+C+ YW Y AYA +LVYP+G+PAL AVL+++KR+L + +AN + PS++ + L AS F+W Y AE+W++ ECARR+LLTG + F+ PG GQAA+SML++F LLAFM RPHR+ +H QYLLGA+I+Y ++ ALL+ L + S + S+ VVG LLV L+V LI AA QT Sbjct: 653 IVVQLVAGFMSITGLQLAAPFEAFIRRLAVIPDFTFIFGCIFHANFYQKLLVVTLAPLLPVALLGCSWLWSLSRXXXXXXXXXXXXXXXXXAHARALRKHWTALLAFTFLVYGTTSSYIFQTFACASVEELDESYLRADYSIRCYDRRYWPYFAYAMAMILVYPVGVPALNAVLLYRKRRLNKEAELQAAFARANAAAARRAPAAKMPSQTSQVALPSSHATVSQLELERSNGGSEREQEYSGLVGASSFIWAPYTNAAEWWELVECARRVLLTGILVFIAPGTPGQAAVSMLMAFVALLAFMAVRPHRDHAMHQQYLLGALIVYFASTNALLLDLNISQSAQ--SQTVVGILLVVLSVVLIVAAAVQT 1019
BLAST of jgi.p|Trimin1|151331 vs. uniprot
Match: A0A835ZAX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAX5_9STRA) HSP 1 Score: 265 bits (677), Expect = 7.480e-82 Identity = 150/330 (45.45%), Postives = 215/330 (65.15%), Query Frame = 1 Query: 1 IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGE----WYLRADYSIQCFANGYWWYAAYAFCAMLVYPIGIPALFAVLVWQKR---KLRRCKANLLVPATQDSTGSPSRSDRLFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPS-SRRVVGWLLVALNVALI 966 +VVQL+ G V+ITGL L ++E F+ LA + D + GCI D FY++LL TL PL+ + +GCSWL + V R + A A A ++LRRHWTLFL F + +VSS VF+TFAC+ EE WYLRADYSI C+ YW AY +LVYPIGIPAL+A ++ +KR +L R +++ A +TGS S + AS FLW+QY +A +W+ ECARR+L TGF+ F++PG AGQAA+S+LL+F +++F+ +P+R+R H+QY LGA+I++LS+ ALL L++D S++ S+ ++G LL+ L+V LI Sbjct: 100 VVVQLIAGLVSITGLQLAPSFESFIHLLAILPDVSFAFGCIFDASFYERLLFMTLMPLVPVIFLGCSWLWSMRRVHRLQETADRAPALAAHAESLRRHWTLFLAWTFFIYSTVSSTVFQTFACDKIEEWSSRPYNWYLRADYSITCYDQLYWCNFAYTAVMVLVYPIGIPALYAYVLHRKRCADQLERQYSDM--SARGANTGSNGESSFIV-ASSFLWDQYTDEAYWWEPVECARRVLFTGFLVFIMPGTAGQAAVSVLLTFVAVVSFLAVQPYRQRARHYQYFLGALIVFLSSFNALL--LKVDASSDNGQSQVIIGALLIVLSVVLI 424
BLAST of jgi.p|Trimin1|151331 vs. uniprot
Match: A0A836CEM9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEM9_9STRA) HSP 1 Score: 270 bits (690), Expect = 1.570e-81 Identity = 160/390 (41.03%), Postives = 228/390 (58.46%), Query Frame = 1 Query: 1 IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFANGYWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLRRCKANLLVPATQDSTGSPSRSDR---------------------------------------------------------LFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPSSRRVVGWLLVALNVALITAAVFQTLVSV 999 IVVQL+ GF++I+GL L E ++ F+ +L+ + F+++ GCI D FY +LL TLAPL+ IA +GCSWL A V + R AAQ A DALRRHWT FL FL FG+VSS +F+ FAC+ ELG+W LRADY++QC+ +GYW Y YA ++VYPIGI AL+A L++ KR+ R K ++L P + +TG S S+ + AS F+W+QY ++A+ W++ ECARRL+LTGF+ F+ P AGQAA S + +F LL + + +PH +R + QY+LGA+I+Y ++ +ALL L++D S + S+ V+G +LV L VALI AA+ Q L V Sbjct: 158 IVVQLVSGFMSISGLELAEPFQSFMMRLSILPSFSVVFGCIYDASFYTRLLFMTLAPLVPIAFLGCSWLFACARVGQLRRANAHAAAQCARSDALRRHWTAFLAWTFLIFGTVSSTIFQAFACDELPELGQWRLRADYAVQCYVDGYWGYFGYAMAMLVVYPIGITALYAYLLYLKRQSDR-KLDVLAPV-EAATGLRSTSNSAQPAGAAIAMYAGAQPNSATDLSVRSIQGSAAAQLSLRSATALGERQSAAVSQSPPGIVGASSFVWDQYHSKAQAWELVECARRLMLTGFLVFIHPQSAGQAAASTVFAFGFLLLYALYKPHHDRTLGHQYILGALIVYFASLSALL--LKVDASADEGSQLVMGIVLVMLTVALIGAALLQILFEV 543
BLAST of jgi.p|Trimin1|151331 vs. uniprot
Match: A0A835Z0D7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0D7_9STRA) HSP 1 Score: 249 bits (635), Expect = 7.610e-78 Identity = 136/288 (47.22%), Postives = 190/288 (65.97%), Query Frame = 1 Query: 127 DLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGE----WYLRADYSIQCFANGYWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLRRCKANLLVPATQDSTGSPSRSDRLFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPSSRRVVGWLLVALNVALITAAV 978 D FY +LL TL PL+ + +GCSWL + +R AG A +A ++ALRRHWTLFL +G+VSS VF+ FAC+ EE WYLRADYSI C+ YW Y AYA +LVYPIGIPAL+A ++ +R+ + + + +P TG+ S SD L AS FLW+QY A +W++ ECARR+L TGF+ F++PG AGQAA+SMLL+F ++F+ +PHR+R +H+QY LG VI++LS+ ALL+ + + S++ S+ V+G LL AL+V L+ AAV Sbjct: 1 DASFYQRLLFMTLMPLVPVIFLGCSWLWSTRRSKRLLETAGRAPALIAHVEALRRHWTLFLAWTLFIYGTVSSTVFQAFACDEIEEWSSHPYNWYLRADYSITCYDRRYWLYFAYAAVMVLVYPIGIPALYAHVLRCRRRADQ-RQHCDIPDAAADTGNTSESDFLM-ASSFLWDQYTDDAHWWELVECARRVLFTGFVVFVMPGTAGQAAVSMLLAFVAAVSFLAVQPHRQRIMHYQYFLGVVIVFLSSVNALLLKVEVS-SDDGQSQVVIGALLKALSVVLVCAAV 285
BLAST of jgi.p|Trimin1|151331 vs. uniprot
Match: A0A835YZL6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZL6_9STRA) HSP 1 Score: 257 bits (656), Expect = 4.620e-77 Identity = 156/359 (43.45%), Postives = 207/359 (57.66%), Query Frame = 1 Query: 1 IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGET----AAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFANGYWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLRRCKAN---LLVPATQDSTGSPSRSDR-----------------------LFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPSSRRVVGWLLVALNVALITAAVFQT 987 IVVQLL G VA TGL +P ++ F ++A D +GC A L F+DKLL TL PL+ + L+ SWL + + D+ ++ AA A +ALRRHWT FL FL FG VSS +F TF+CE F ELG+WYL + VYPIGI L AV++W+KR+L ++N VP ++T RS L AS FLW QY +A++W++ EC RRLLLTGFIAF+LPG AGQAA+SML +F ++ F + RPH+ER QYLLG++IIY+STA AL + +L+ + + S+R+VG LL+ LNVALI AAV QT Sbjct: 239 IVVQLLWGIVAATGLQMPANFQAFFTRIAIAPDL-FALGCAAHLSFFDKLLLVTLLPLLPVVLLVLSWLLSTRRMSVLAPDSADSTAVAAAAAARAEALRRHWTAFLAFTFLIFGGVSSSIFLTFSCEEFPELGKWYL---------------------LMLFVYPIGITGLHAVMIWRKRQLDAHRSNNTTAKVPHECENTFGADRSSNGTAPPNSSVALTDAAAATDPQHGLVHASAFLWSQYTDKADWWELVECTRRLLLTGFIAFILPGRAGQAAVSMLFAFASVVVFTVVRPHKERGERCQYLLGSIIIYMSTATALFM--KLNVTGDLQSQRIVGALLIMLNVALIVAAVLQT 573
BLAST of jgi.p|Trimin1|151331 vs. uniprot
Match: A0A836CDT7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDT7_9STRA) HSP 1 Score: 265 bits (677), Expect = 1.210e-76 Identity = 152/361 (42.11%), Postives = 205/361 (56.79%), Query Frame = 1 Query: 1 IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFANG-YWWYAAYAFCAMLVYPIGIPALFAVLVWQKR-------------------------------------------------------KLRRCK-ANLLVPATQDSTGSPSRSDR-----LFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLD 897 IV+QL+ GF++ITGL L ++E F+ L+ + + GC+ D FY +LL TL PL+ +AL+G SWL VR+ R + AAQ AL +HWT FL + FL +G+VSS++F+TFAC+H +EL YLR DYSI+C+ N YWWY YA MLVYPIGIPAL+AVLV++KR LRR +NL V D+T + D+ L AS FLW QY +AE+W++ EC RR+LLTG + F+LPG AGQAA+SM ++F LLL FM +PH+E QYLLGAVI+Y++++ ALLI + D Sbjct: 862 IVIQLIGGFISITGLELAPSFETFIRTLSVLPILSFGWGCVWDASFYQRLLVMTLFPLVLVALLGISWLRVLARVRKMRCSVDDAAAQAVRQHALHKHWTAFLALTFLVYGTVSSIIFQTFACDHVQELHTAYLRVDYSIECYNNTEYWWYFGYAMAMMLVYPIGIPALYAVLVYRKRCHKMTMAAAIGGDAHMRAFSTAPACVPDPLRRGCDKSAEAGLGISLSMENSPASSTLRRAPMSNLAVEQLGDTTEAKLAQDQEVLTDLVSASAFLWAQYTPEAEWWELLECLRRILLTGALVFILPGSAGQAAVSMFMAFALLLVFMAKKPHKEYAARGQYLLGAVIVYMASSTALLIKAQPD 1222 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|151331 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11841 ID=mRNA_11841|Name=jgi.p|Trimin1|151331|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1011bp|location=Sequence derived from alignment at Contig_102:419345..420355- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATTGTCGTACAGTTGCTGTGCGGCTTCGTTGCAATCACTGGCCTCGCACTback to top protein sequence of jgi.p|Trimin1|151331 >Trimin1|151331|gw1.102.91.1 ID=Trimin1|151331|gw1.102.91.1|Name=jgi.p|Trimin1|151331|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=337bp IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLback to top mRNA from alignment at Contig_102:419345..420355- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11841 ID=mRNA_11841|Name=jgi.p|Trimin1|151331|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1011bp|location=Sequence derived from alignment at Contig_102:419345..420355- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_102:419345..420355- >mRNA_11841 ID=mRNA_11841|Name=jgi.p|Trimin1|151331|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1011bp|location=Sequence derived from alignment at Contig_102:419345..420355- (Tribonema minus UTEX_B_3156 )back to top |