mRNA_11841 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|151331
Unique NamemRNA_11841
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|151331 vs. uniprot
Match: A0A835ZPJ6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPJ6_9STRA)

HSP 1 Score: 662 bits (1709), Expect = 2.560e-240
Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 1
Query:    1 IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFANGYWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLRRCKANLLVPATQDSTGSPSRSDRLFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPSSRRVVGWLLVALNVALITAAVFQTLVSVAKPG 1011
            IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFANGYWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLRRCKANLLVPATQDSTGSPSRSDRLFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPSSRRVVGWLLVALNVALITAAVFQTLVSVAKPG
Sbjct:    1 IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFANGYWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLRRCKANLLVPATQDSTGSPSRSDRLFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPSSRRVVGWLLVALNVALITAAVFQTLVSVAKPG 337          
BLAST of jgi.p|Trimin1|151331 vs. uniprot
Match: A0A835YJS2_9STRA (TRP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJS2_9STRA)

HSP 1 Score: 316 bits (810), Expect = 1.490e-102
Identity = 165/330 (50.00%), Postives = 226/330 (68.48%), Query Frame = 1
Query:    1 IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFANGYWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLR-RCKANLLVPATQDSTGSPSRSDRLFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPSSRRVVGWLLVALNVALITAAVFQT 987
            +V QLL GF+ +TGLA P+ Y   +  ++F +D T+++GC+A+L+FY KLLA TLAPL  + L+G SWL A    ++ +   G  AA L   +ALRRHWT FL   FL FG VSSVVF TF CE  +     YLRADYS+QC+ + YW YA YA   + VYPIGI AL++VL+W+K KL+   K N  +        S +   RL EASGFLWEQY  +  +W++ EC RRLL+TGF+AF+LPG   QA + ML++F  L+A+++ RPHR+R+ +WQY+ GA+I+YLST +ALL   +LD + EP S+ +VG +L+ L+VA+I AAVFQT
Sbjct:   48 VVFQLLWGFMEVTGLAYPQVYATMIAYISFASDLTLVLGCVAELNFYQKLLAMTLAPLAVVVLLGASWLLACWRAQQLQRSDGFEAAYLMHQEALRRHWTAFLAFTFLVFGVVSSVVFLTFVCEELD-----YLRADYSVQCYTSEYWAYAVYAAVMLFVYPIGITALYSVLLWRKSKLKMNNKGNSKIVRV----ASLAPRSRLVEASGFLWEQYTEETPWWEIAECVRRLLITGFVAFILPGTVSQAVVGMLMAFASLMAYLMVRPHRDRRTYWQYITGALILYLSTMSALLQ--KLDIAKEPQSQAIVGIVLIVLSVAMIAAAVFQT 366          
BLAST of jgi.p|Trimin1|151331 vs. uniprot
Match: A0A835Z836_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z836_9STRA)

HSP 1 Score: 297 bits (761), Expect = 1.320e-95
Identity = 163/332 (49.10%), Postives = 223/332 (67.17%), Query Frame = 1
Query:   10 QLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFANG-YWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLRRCKANLLVPATQDSTGSPSRSDRLFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPSSRRVVGWLLVALNVALITAAVFQTLVSVA 1002
            QL+ GF+ +TGL L   +E F+ KLA + + +   GC+ +  FY+KLLA TL PL+ +AL+GCSWL A     R R  AG  AA+ A L ALR+HWT FL + FL +G+VSS++F+TFAC++ +EL  +YLRADYSIQC+ N  YW Y AYA    +VYP+G+PAL+A+L+  KR+  + +    V A     G     D L  AS FLW QYK +AE+W++ ECARR++LTG + F+LPG AGQAA+S+L +F L L FM  RPHRE  +  QYLLGAVI+Y ++  ALLI  ++  +    S+ VVG +++ ++ ALI AAV QTL  VA
Sbjct:   23 QLVAGFLEVTGLQLAPTFENFIHKLAILPNLSFAWGCVYNATFYEKLLAMTLGPLVAVALLGCSWLWAVAREHRLRRVAGADAARAARLKALRKHWTAFLALTFLVYGTVSSIIFQTFACDYMQELDTYYLRADYSIQCYNNSEYWRYFAYAMTMFVVYPLGVPALYALLLCFKRRQHQARQGA-VAAAPSVQGLEPHWD-LVHASSFLWAQYKPKAEWWEMVECARRVVLTGVLVFILPGSAGQAAVSVLFAFLLTLIFMAVRPHREHAMQRQYLLGAVIVYFASMNALLIKSQVSGAQ---SQLVVGIVMIIISTALIVAAVAQTLYGVA 349          
BLAST of jgi.p|Trimin1|151331 vs. uniprot
Match: A0A835ZA22_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA22_9STRA)

HSP 1 Score: 274 bits (700), Expect = 6.390e-87
Identity = 143/292 (48.97%), Postives = 198/292 (67.81%), Query Frame = 1
Query:   10 QLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFAN-GYWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLRRCKANLLVPATQDSTGSPSRSDRLFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLI 882
            QL+ GF+ +TGL L  A+E F+ KLA + + +   GC+ +  FY++LL  TL PL+ +AL+GCSWL A     R +  AG  AA+   L ALR+HWT FL + FL +G+VSS +F+TFAC++ +EL  +YLRADYSIQC+ N  YW Y AYA    +VYP+G+PAL+A+L+  +R+ +      LV A      +P+    L  AS FLW QYK +AE+W++ ECARR++LTG + F+LPG AGQAA+S+L +F L L FM  RP+RE  +  QYLLGAVI+Y ++  ALLI
Sbjct:   10 QLVAGFLEVTGLQLAPAFENFIHKLATLLNLSFAWGCVYNATFYEQLLVMTLGPLVAVALLGCSWLWALVREHRVQRVAGADAARAVRLKALRKHWTAFLALTFLVYGTVSSTIFQTFACDYVQELDTYYLRADYSIQCYNNLEYWRYFAYAMTMFVVYPLGVPALYALLLCSRRRQQHQAQQGLVAA------APNSHWDLVHASSFLWAQYKPEAEWWEIVECARRVVLTGVLVFILPGSAGQAAVSVLFAFFLALMFMAVRPYREHTMQRQYLLGAVIVYFASMNALLI 295          
BLAST of jgi.p|Trimin1|151331 vs. uniprot
Match: A0A835ZGE0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGE0_9STRA)

HSP 1 Score: 279 bits (714), Expect = 2.100e-82
Identity = 162/369 (43.90%), Postives = 216/369 (58.54%), Query Frame = 1
Query:    1 IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWL--AAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFANGYWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLRR--------CKANLLVPATQDSTGSPSRSDR------------------------------LFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPSSRRVVGWLLVALNVALITAAVFQT 987
            IVVQL+ GF++ITGL L   +E F+ +LA I DFT + GCI   +FY KLL  TLAPL+ +AL+GCSWL   ++                 A   ALR+HWT  L   FL +G+ SS +F+TFAC   EEL E YLRADYSI+C+   YW Y AYA   +LVYP+G+PAL AVL+++KR+L +         +AN        +   PS++ +                              L  AS F+W  Y   AE+W++ ECARR+LLTG + F+ PG  GQAA+SML++F  LLAFM  RPHR+  +H QYLLGA+I+Y ++  ALL+ L +  S +  S+ VVG LLV L+V LI AA  QT
Sbjct:  653 IVVQLVAGFMSITGLQLAAPFEAFIRRLAVIPDFTFIFGCIFHANFYQKLLVVTLAPLLPVALLGCSWLWSLSRXXXXXXXXXXXXXXXXXAHARALRKHWTALLAFTFLVYGTTSSYIFQTFACASVEELDESYLRADYSIRCYDRRYWPYFAYAMAMILVYPVGVPALNAVLLYRKRRLNKEAELQAAFARANAAAARRAPAAKMPSQTSQVALPSSHATVSQLELERSNGGSEREQEYSGLVGASSFIWAPYTNAAEWWELVECARRVLLTGILVFIAPGTPGQAAVSMLMAFVALLAFMAVRPHRDHAMHQQYLLGALIVYFASTNALLLDLNISQSAQ--SQTVVGILLVVLSVVLIVAAAVQT 1019          
BLAST of jgi.p|Trimin1|151331 vs. uniprot
Match: A0A835ZAX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAX5_9STRA)

HSP 1 Score: 265 bits (677), Expect = 7.480e-82
Identity = 150/330 (45.45%), Postives = 215/330 (65.15%), Query Frame = 1
Query:    1 IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGE----WYLRADYSIQCFANGYWWYAAYAFCAMLVYPIGIPALFAVLVWQKR---KLRRCKANLLVPATQDSTGSPSRSDRLFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPS-SRRVVGWLLVALNVALI 966
            +VVQL+ G V+ITGL L  ++E F+  LA + D +   GCI D  FY++LL  TL PL+ +  +GCSWL +   V R +  A    A  A  ++LRRHWTLFL   F  + +VSS VF+TFAC+  EE       WYLRADYSI C+   YW   AY    +LVYPIGIPAL+A ++ +KR   +L R  +++   A   +TGS   S  +  AS FLW+QY  +A +W+  ECARR+L TGF+ F++PG AGQAA+S+LL+F  +++F+  +P+R+R  H+QY LGA+I++LS+  ALL  L++D S++   S+ ++G LL+ L+V LI
Sbjct:  100 VVVQLIAGLVSITGLQLAPSFESFIHLLAILPDVSFAFGCIFDASFYERLLFMTLMPLVPVIFLGCSWLWSMRRVHRLQETADRAPALAAHAESLRRHWTLFLAWTFFIYSTVSSTVFQTFACDKIEEWSSRPYNWYLRADYSITCYDQLYWCNFAYTAVMVLVYPIGIPALYAYVLHRKRCADQLERQYSDM--SARGANTGSNGESSFIV-ASSFLWDQYTDEAYWWEPVECARRVLFTGFLVFIMPGTAGQAAVSVLLTFVAVVSFLAVQPYRQRARHYQYFLGALIVFLSSFNALL--LKVDASSDNGQSQVIIGALLIVLSVVLI 424          
BLAST of jgi.p|Trimin1|151331 vs. uniprot
Match: A0A836CEM9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEM9_9STRA)

HSP 1 Score: 270 bits (690), Expect = 1.570e-81
Identity = 160/390 (41.03%), Postives = 228/390 (58.46%), Query Frame = 1
Query:    1 IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFANGYWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLRRCKANLLVPATQDSTGSPSRSDR---------------------------------------------------------LFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPSSRRVVGWLLVALNVALITAAVFQTLVSV 999
            IVVQL+ GF++I+GL L E ++ F+ +L+ +  F+++ GCI D  FY +LL  TLAPL+ IA +GCSWL A   V + R      AAQ A  DALRRHWT FL   FL FG+VSS +F+ FAC+   ELG+W LRADY++QC+ +GYW Y  YA   ++VYPIGI AL+A L++ KR+  R K ++L P  + +TG  S S+                                                          +  AS F+W+QY ++A+ W++ ECARRL+LTGF+ F+ P  AGQAA S + +F  LL + + +PH +R +  QY+LGA+I+Y ++ +ALL  L++D S +  S+ V+G +LV L VALI AA+ Q L  V
Sbjct:  158 IVVQLVSGFMSISGLELAEPFQSFMMRLSILPSFSVVFGCIYDASFYTRLLFMTLAPLVPIAFLGCSWLFACARVGQLRRANAHAAAQCARSDALRRHWTAFLAWTFLIFGTVSSTIFQAFACDELPELGQWRLRADYAVQCYVDGYWGYFGYAMAMLVVYPIGITALYAYLLYLKRQSDR-KLDVLAPV-EAATGLRSTSNSAQPAGAAIAMYAGAQPNSATDLSVRSIQGSAAAQLSLRSATALGERQSAAVSQSPPGIVGASSFVWDQYHSKAQAWELVECARRLMLTGFLVFIHPQSAGQAAASTVFAFGFLLLYALYKPHHDRTLGHQYILGALIVYFASLSALL--LKVDASADEGSQLVMGIVLVMLTVALIGAALLQILFEV 543          
BLAST of jgi.p|Trimin1|151331 vs. uniprot
Match: A0A835Z0D7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0D7_9STRA)

HSP 1 Score: 249 bits (635), Expect = 7.610e-78
Identity = 136/288 (47.22%), Postives = 190/288 (65.97%), Query Frame = 1
Query:  127 DLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGE----WYLRADYSIQCFANGYWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLRRCKANLLVPATQDSTGSPSRSDRLFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPSSRRVVGWLLVALNVALITAAV 978
            D  FY +LL  TL PL+ +  +GCSWL +    +R    AG   A +A ++ALRRHWTLFL      +G+VSS VF+ FAC+  EE       WYLRADYSI C+   YW Y AYA   +LVYPIGIPAL+A ++  +R+  + + +  +P     TG+ S SD L  AS FLW+QY   A +W++ ECARR+L TGF+ F++PG AGQAA+SMLL+F   ++F+  +PHR+R +H+QY LG VI++LS+  ALL+ + +  S++  S+ V+G LL AL+V L+ AAV
Sbjct:    1 DASFYQRLLFMTLMPLVPVIFLGCSWLWSTRRSKRLLETAGRAPALIAHVEALRRHWTLFLAWTLFIYGTVSSTVFQAFACDEIEEWSSHPYNWYLRADYSITCYDRRYWLYFAYAAVMVLVYPIGIPALYAHVLRCRRRADQ-RQHCDIPDAAADTGNTSESDFLM-ASSFLWDQYTDDAHWWELVECARRVLFTGFVVFVMPGTAGQAAVSMLLAFVAAVSFLAVQPHRQRIMHYQYFLGVVIVFLSSVNALLLKVEVS-SDDGQSQVVIGALLKALSVVLVCAAV 285          
BLAST of jgi.p|Trimin1|151331 vs. uniprot
Match: A0A835YZL6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZL6_9STRA)

HSP 1 Score: 257 bits (656), Expect = 4.620e-77
Identity = 156/359 (43.45%), Postives = 207/359 (57.66%), Query Frame = 1
Query:    1 IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGET----AAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFANGYWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLRRCKAN---LLVPATQDSTGSPSRSDR-----------------------LFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPSSRRVVGWLLVALNVALITAAVFQT 987
            IVVQLL G VA TGL +P  ++ F  ++A   D    +GC A L F+DKLL  TL PL+ + L+  SWL +   +     D+ ++    AA  A  +ALRRHWT FL   FL FG VSS +F TF+CE F ELG+WYL                       + VYPIGI  L AV++W+KR+L   ++N     VP   ++T    RS                         L  AS FLW QY  +A++W++ EC RRLLLTGFIAF+LPG AGQAA+SML +F  ++ F + RPH+ER    QYLLG++IIY+STA AL +  +L+ + +  S+R+VG LL+ LNVALI AAV QT
Sbjct:  239 IVVQLLWGIVAATGLQMPANFQAFFTRIAIAPDL-FALGCAAHLSFFDKLLLVTLLPLLPVVLLVLSWLLSTRRMSVLAPDSADSTAVAAAAAARAEALRRHWTAFLAFTFLIFGGVSSSIFLTFSCEEFPELGKWYL---------------------LMLFVYPIGITGLHAVMIWRKRQLDAHRSNNTTAKVPHECENTFGADRSSNGTAPPNSSVALTDAAAATDPQHGLVHASAFLWSQYTDKADWWELVECTRRLLLTGFIAFILPGRAGQAAVSMLFAFASVVVFTVVRPHKERGERCQYLLGSIIIYMSTATALFM--KLNVTGDLQSQRIVGALLIMLNVALIVAAVLQT 573          
BLAST of jgi.p|Trimin1|151331 vs. uniprot
Match: A0A836CDT7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDT7_9STRA)

HSP 1 Score: 265 bits (677), Expect = 1.210e-76
Identity = 152/361 (42.11%), Postives = 205/361 (56.79%), Query Frame = 1
Query:    1 IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFANG-YWWYAAYAFCAMLVYPIGIPALFAVLVWQKR-------------------------------------------------------KLRRCK-ANLLVPATQDSTGSPSRSDR-----LFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLD 897
            IV+QL+ GF++ITGL L  ++E F+  L+ +   +   GC+ D  FY +LL  TL PL+ +AL+G SWL     VR+ R    + AAQ     AL +HWT FL + FL +G+VSS++F+TFAC+H +EL   YLR DYSI+C+ N  YWWY  YA   MLVYPIGIPAL+AVLV++KR                                                        LRR   +NL V    D+T +    D+     L  AS FLW QY  +AE+W++ EC RR+LLTG + F+LPG AGQAA+SM ++F LLL FM  +PH+E     QYLLGAVI+Y++++ ALLI  + D
Sbjct:  862 IVIQLIGGFISITGLELAPSFETFIRTLSVLPILSFGWGCVWDASFYQRLLVMTLFPLVLVALLGISWLRVLARVRKMRCSVDDAAAQAVRQHALHKHWTAFLALTFLVYGTVSSIIFQTFACDHVQELHTAYLRVDYSIECYNNTEYWWYFGYAMAMMLVYPIGIPALYAVLVYRKRCHKMTMAAAIGGDAHMRAFSTAPACVPDPLRRGCDKSAEAGLGISLSMENSPASSTLRRAPMSNLAVEQLGDTTEAKLAQDQEVLTDLVSASAFLWAQYTPEAEWWELLECLRRILLTGALVFILPGSAGQAAVSMFMAFALLLVFMAKKPHKEYAARGQYLLGAVIVYMASSTALLIKAQPD 1222          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|151331 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZPJ6_9STRA2.560e-240100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YJS2_9STRA1.490e-10250.00TRP domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A835Z836_9STRA1.320e-9549.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZA22_9STRA6.390e-8748.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZGE0_9STRA2.100e-8243.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZAX5_9STRA7.480e-8245.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CEM9_9STRA1.570e-8141.03Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z0D7_9STRA7.610e-7847.22Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YZL6_9STRA4.620e-7743.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CDT7_9STRA1.210e-7642.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_102contigContig_102:419345..420355 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|151331|gw1.102.91.1
Max annot lvl2759|Eukaryota
EggNOG OGs2BFIX@1|root,2S176@2759|Eukaryota
Evalue1.59e-41
Seed ortholog2880.D7FHH1
Hectar predicted targeting categorysignal peptide
TranscriptId151653
TrackFilteredModels1
ProteinId151331
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|151331gene_11841Tribonema minus UTEX_B_3156 geneContig_102 419345..420355 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11841_1exon_11841_1Tribonema minus UTEX_B_3156 exonContig_102 419345..420355 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11841CDS_11841Tribonema minus UTEX_B_3156 CDSContig_102 419345..420355 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|151331Trimin1|151331|gw1.102.91.1Tribonema minus UTEX_B_3156 polypeptideContig_102 419345..420355 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11841 ID=mRNA_11841|Name=jgi.p|Trimin1|151331|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1011bp|location=Sequence derived from alignment at Contig_102:419345..420355- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATTGTCGTACAGTTGCTGTGCGGCTTCGTTGCAATCACTGGCCTCGCACT
GCCAGAGGCGTATGAGCAGTTTCTCGACAAGCTCGCATTCATAGCCGATT
TTACCATAATGATGGGGTGCATCGCGGACCTAGATTTCTATGACAAGCTG
CTGGCCACCACGTTGGCGCCCCTGATGTACATCGCCCTGGTGGGCTGCTC
ATGGCTGGCGGCACAACACTGTGTGCGGCGTGCACGACTCGATGCCGGCG
AGACAGCAGCTCAACTGGCGGACCTGGACGCGCTACGACGACACTGGACC
TTGTTTCTCGGAATCCTCTTTCTCAATTTCGGCAGCGTCTCCAGCGTCGT
CTTTCGCACCTTTGCGTGCGAACACTTTGAGGAGCTAGGGGAGTGGTACC
TGCGAGCTGACTACTCCATTCAGTGCTTCGCAAACGGCTACTGGTGGTAT
GCTGCCTATGCCTTCTGCGCGATGCTGGTGTACCCTATCGGCATTCCAGC
GCTCTTCGCAGTGCTGGTGTGGCAGAAGCGGAAGCTGCGCCGTTGCAAAG
CCAACTTGCTGGTGCCTGCCACACAGGACTCAACGGGGTCGCCATCACGC
TCGGACAGACTCTTTGAAGCATCAGGCTTCCTGTGGGAGCAGTACAAAAC
ACAGGCAGAGTACTGGAAGGTTTTTGAGTGCGCAAGGCGATTGCTCCTTA
CAGGTTTTATCGCTTTCTTGTTGCCAGGGGAGGCTGGGCAGGCTGCAATT
TCCATGCTTTTATCGTTTACTCTGCTGCTGGCGTTTATGATTGCACGGCC
TCATCGGGAGCGACAAGTACATTGGCAATACTTGCTCGGTGCGGTCATCA
TCTATTTATCGACGGCCGCGGCTCTGCTGATAAGCCTGAGGCTTGACTAC
TCCAATGAGCCCTCGTCGAGGCGAGTCGTTGGCTGGCTCCTGGTCGCTCT
CAACGTCGCACTTATTACTGCCGCTGTGTTTCAGACACTAGTGAGTGTAG
CTAAGCCAGGG
back to top

protein sequence of jgi.p|Trimin1|151331

>Trimin1|151331|gw1.102.91.1 ID=Trimin1|151331|gw1.102.91.1|Name=jgi.p|Trimin1|151331|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=337bp
IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKL
LATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWT
LFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFANGYWWY
AAYAFCAMLVYPIGIPALFAVLVWQKRKLRRCKANLLVPATQDSTGSPSR
SDRLFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAI
SMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDY
SNEPSSRRVVGWLLVALNVALITAAVFQTLVSVAKPG
back to top

mRNA from alignment at Contig_102:419345..420355-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11841 ID=mRNA_11841|Name=jgi.p|Trimin1|151331|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1011bp|location=Sequence derived from alignment at Contig_102:419345..420355- (Tribonema minus UTEX_B_3156 )
ATTGTCGTACAGTTGCTGTGCGGCTTCGTTGCAATCACTGGCCTCGCACT GCCAGAGGCGTATGAGCAGTTTCTCGACAAGCTCGCATTCATAGCCGATT TTACCATAATGATGGGGTGCATCGCGGACCTAGATTTCTATGACAAGCTG CTGGCCACCACGTTGGCGCCCCTGATGTACATCGCCCTGGTGGGCTGCTC ATGGCTGGCGGCACAACACTGTGTGCGGCGTGCACGACTCGATGCCGGCG AGACAGCAGCTCAACTGGCGGACCTGGACGCGCTACGACGACACTGGACC TTGTTTCTCGGAATCCTCTTTCTCAATTTCGGCAGCGTCTCCAGCGTCGT CTTTCGCACCTTTGCGTGCGAACACTTTGAGGAGCTAGGGGAGTGGTACC TGCGAGCTGACTACTCCATTCAGTGCTTCGCAAACGGCTACTGGTGGTAT GCTGCCTATGCCTTCTGCGCGATGCTGGTGTACCCTATCGGCATTCCAGC GCTCTTCGCAGTGCTGGTGTGGCAGAAGCGGAAGCTGCGCCGTTGCAAAG CCAACTTGCTGGTGCCTGCCACACAGGACTCAACGGGGTCGCCATCACGC TCGGACAGACTCTTTGAAGCATCAGGCTTCCTGTGGGAGCAGTACAAAAC ACAGGCAGAGTACTGGAAGGTTTTTGAGTGCGCAAGGCGATTGCTCCTTA CAGGTTTTATCGCTTTCTTGTTGCCAGGGGAGGCTGGGCAGGCTGCAATT TCCATGCTTTTATCGTTTACTCTGCTGCTGGCGTTTATGATTGCACGGCC TCATCGGGAGCGACAAGTACATTGGCAATACTTGCTCGGTGCGGTCATCA TCTATTTATCGACGGCCGCGGCTCTGCTGATAAGCCTGAGGCTTGACTAC TCCAATGAGCCCTCGTCGAGGCGAGTCGTTGGCTGGCTCCTGGTCGCTCT CAACGTCGCACTTATTACTGCCGCTGTGTTTCAGACACTAGTGAGTGTAG CTAAGCCAGGG
back to top

Coding sequence (CDS) from alignment at Contig_102:419345..420355-

>mRNA_11841 ID=mRNA_11841|Name=jgi.p|Trimin1|151331|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1011bp|location=Sequence derived from alignment at Contig_102:419345..420355- (Tribonema minus UTEX_B_3156 )
ATTGTCGTACAGTTGCTGTGCGGCTTCGTTGCAATCACTGGCCTCGCACT
GCCAGAGGCGTATGAGCAGTTTCTCGACAAGCTCGCATTCATAGCCGATT
TTACCATAATGATGGGGTGCATCGCGGACCTAGATTTCTATGACAAGCTG
CTGGCCACCACGTTGGCGCCCCTGATGTACATCGCCCTGGTGGGCTGCTC
ATGGCTGGCGGCACAACACTGTGTGCGGCGTGCACGACTCGATGCCGGCG
AGACAGCAGCTCAACTGGCGGACCTGGACGCGCTACGACGACACTGGACC
TTGTTTCTCGGAATCCTCTTTCTCAATTTCGGCAGCGTCTCCAGCGTCGT
CTTTCGCACCTTTGCGTGCGAACACTTTGAGGAGCTAGGGGAGTGGTACC
TGCGAGCTGACTACTCCATTCAGTGCTTCGCAAACGGCTACTGGTGGTAT
GCTGCCTATGCCTTCTGCGCGATGCTGGTGTACCCTATCGGCATTCCAGC
GCTCTTCGCAGTGCTGGTGTGGCAGAAGCGGAAGCTGCGCCGTTGCAAAG
CCAACTTGCTGGTGCCTGCCACACAGGACTCAACGGGGTCGCCATCACGC
TCGGACAGACTCTTTGAAGCATCAGGCTTCCTGTGGGAGCAGTACAAAAC
ACAGGCAGAGTACTGGAAGGTTTTTGAGTGCGCAAGGCGATTGCTCCTTA
CAGGTTTTATCGCTTTCTTGTTGCCAGGGGAGGCTGGGCAGGCTGCAATT
TCCATGCTTTTATCGTTTACTCTGCTGCTGGCGTTTATGATTGCACGGCC
TCATCGGGAGCGACAAGTACATTGGCAATACTTGCTCGGTGCGGTCATCA
TCTATTTATCGACGGCCGCGGCTCTGCTGATAAGCCTGAGGCTTGACTAC
TCCAATGAGCCCTCGTCGAGGCGAGTCGTTGGCTGGCTCCTGGTCGCTCT
CAACGTCGCACTTATTACTGCCGCTGTGTTTCAGACACTAGTGAGTGTAG
CTAAGCCAGGG
back to top