mRNA_11674 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|142416
Unique NamemRNA_11674
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|142416 vs. uniprot
Match: A0A835ZHQ1_9STRA (Hud and Au-rich element of the tumor necrosis factor alpha Rna (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHQ1_9STRA)

HSP 1 Score: 308 bits (788), Expect = 1.720e-105
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1 
Query:    1 ANLIVNYLPHSLGDRRLVEMFAPHGVIAHAKVVRDRATGGSMGYGFVRFAGPPPPAXXXXXXXXXXIAALNGARVGGKHIRVSLARPSSEAIQNCKLHVAGMPPASRQADLEALCAPHGTVIECRVLINTATGRARGSAFVIFSVRAEAEAARAALDGLVMPGATRPLAV 510
            ANLIVNYLPHSLGDRRLVEMFAPHGVIAHAKVVRDRATGGSMGYGFVRFAGPPPPAXXXXXXXXXXIAALNGARVGGKHIRVSLARPSSEAIQNCKLHVAGMPPASRQADLEALCAPHGTVIECRVLINTATGRARGSAFVIFSVRAEAEAARAALDGLVMPGATRPLAV
Sbjct:    1 ANLIVNYLPHSLGDRRLVEMFAPHGVIAHAKVVRDRATGGSMGYGFVRFAGPPPPAXXXXXXXXXXIAALNGARVGGKHIRVSLARPSSEAIQNCKLHVAGMPPASRQADLEALCAPHGTVIECRVLINTATGRARGSAFVIFSVRAEAEAARAALDGLVMPGATRPLAV 170
[Close]
BLAST of jgi.p|Trimin1|142416 vs. uniprot
Match: A0A836CBL9_9STRA (RNA-binding domain of Hu antigen C n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBL9_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.350e-34
Identity = 64/102 (62.75%), Postives = 75/102 (73.53%), Query Frame = 1 
Query:    4 NLIVNYLPHSLGDRRLVEMFAPHGVIAHAKVVRDRATGGSMGYGFVRFAGPPPPAXXXXXXXXXXIAALNGARVGGKHIRVSLARPSSEAIQNCKLHVAGMP 309
            NLIVNYLPH++  +RL E+FAP+G +AHAKVVRDRATGGS+GYGFVRFA                  AL+GARVG K IRVS ARPSS +I+ CKLHVAG+P
Sbjct:    2 NLIVNYLPHAVSSKRLAELFAPYGAVAHAKVVRDRATGGSLGYGFVRFA--------RAAGAAAAATALDGARVGDKRIRVSAARPSSASIRRCKLHVAGLP 95
[Close]
BLAST of jgi.p|Trimin1|142416 vs. uniprot
Match: A0A6J2W8N1_CHACN (ELAV-like protein n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2W8N1_CHACN)

HSP 1 Score: 128 bits (322), Expect = 1.410e-32
Identity = 72/170 (42.35%), Postives = 103/170 (60.59%), Query Frame = 1 
Query:    1 ANLIVNYLPHSLGDRRLVEMFAPHGVIAHAKVVRDRATGGSMGYGFVRFAGPPPPAXXXXXXXXXXIAALNGARVGGKHIRVSLARPSSEAIQNCKLHVAGMPPASRQADLEALCAPHGTVIECRVLINTATGRARGSAFVIFSVRAEAEAARAALDGLVMPGATRPLAV 510
             NLIVNYLP ++    L  +F+  G +  AK++RD+ TG S+GYGFV +  P              I+ LNG R+  K I+VS ARPSS+ I++  L+++G+P    Q D+E + A  G +I  RVL++ A+G +RG AF+ F  RAEAE A  AL+G   PGA+ P+ V
Sbjct:   55 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVTGHSLGYGFVNYVNP--------SDAERAISTLNGLRLQSKTIKVSYARPSSDTIKDANLYISGLPKTMTQKDVEDMFARFGRIINSRVLVDQASGLSRGVAFIRFDKRAEAEDAIKALNGQKPPGASEPITV 216
[Close]
BLAST of jgi.p|Trimin1|142416 vs. uniprot
Match: A0A6P4Z448_BRABE (ELAV-like protein 1 isoform X1 n=20 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4Z448_BRABE)

HSP 1 Score: 127 bits (320), Expect = 2.850e-32
Identity = 72/170 (42.35%), Postives = 99/170 (58.24%), Query Frame = 1 
Query:    1 ANLIVNYLPHSLGDRRLVEMFAPHGVIAHAKVVRDRATGGSMGYGFVRFAGPPPPAXXXXXXXXXXIAALNGARVGGKHIRVSLARPSSEAIQNCKLHVAGMPPASRQADLEALCAPHGTVIECRVLINTATGRARGSAFVIFSVRAEAEAARAALDGLVMPGATRPLAV 510
             NLIVNYLP ++    +  +F+  G +   K++RD+ TG S+GYGFV +  P              I  LNG R+  K I+VS ARPSS+AI++  L+V+G+P    QADLE L   HG +I  R+L +  TG++RG  FV F  R EAE A   L+G +  GAT P+ V
Sbjct:   64 TNLIVNYLPQTMTQDEIKSLFSSIGEVESCKLIRDKVTGQSLGYGFVNYVKP--------QDAEKAINTLNGLRLQAKTIKVSYARPSSQAIKDANLYVSGLPKTMTQADLEGLFEAHGRIITSRILFDPVTGQSRGVGFVRFDQRVEAERAITELNGHIPKGATDPITV 225
[Close]
BLAST of jgi.p|Trimin1|142416 vs. uniprot
Match: I2CPF3_NANGC (Elav-like protein 2 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPF3_NANGC)

HSP 1 Score: 126 bits (316), Expect = 8.000e-32
Identity = 73/170 (42.94%), Postives = 103/170 (60.59%), Query Frame = 1 
Query:    1 ANLIVNYLPHSLGDRRLVEMFAPHGVIAHAKVVRDRATGGSMGYGFVRFAGPPPPAXXXXXXXXXXIAALNGARVGGKHIRVSLARPSSEAIQNCKLHVAGMPPASRQADLEALCAPHGTVIECRVLINTATGRARGSAFVIFSVRAEAEAARAALDGLVMPGATRPLAV 510
             NLIVNYLP+ + D  L E+F   G +  A+V+R++ +G S+GYGFV++  P              I   NG +V GK I+VS+ARP+SE  ++ KL+VA +P    +A++  L APHG +IECR+L+   +GR RG AFV ++ R EA AA  +L    M G  RPL V
Sbjct:  116 TNLIVNYLPNEIDDMGLRELFQDFGQVESARVIREKGSGRSLGYGFVKYKDP--------QSADSAILTRNGHQVYGKRIKVSVARPASEEHKHTKLYVANLPHHFTKAEVIQLFAPHGRIIECRLLMEANSGRFRGIAFVQYNTRQEAAAAIRSLHDTPMEGVPRPLIV 277
[Close]
BLAST of jgi.p|Trimin1|142416 vs. uniprot
Match: I3J570_ORENI (ELAV-like protein n=29 Tax=Percomorphaceae TaxID=1489872 RepID=I3J570_ORENI)

HSP 1 Score: 126 bits (316), Expect = 8.150e-32
Identity = 70/170 (41.18%), Postives = 102/170 (60.00%), Query Frame = 1 
Query:    1 ANLIVNYLPHSLGDRRLVEMFAPHGVIAHAKVVRDRATGGSMGYGFVRFAGPPPPAXXXXXXXXXXIAALNGARVGGKHIRVSLARPSSEAIQNCKLHVAGMPPASRQADLEALCAPHGTVIECRVLINTATGRARGSAFVIFSVRAEAEAARAALDGLVMPGATRPLAV 510
             NLIVNYLP S+    L  +F+  G +  AK++RD+  G S+GYGFV F  P              I+ LNG R+  K I+VS ARPSS+AI++  L+++G+P    Q D+E + + +G +I  RVL++ A+G +RG AF+ F  RAEA+ A   L+G   PG+  P+ V
Sbjct:   55 TNLIVNYLPQSMSQDELRSLFSSVGEVESAKLIRDKVAGHSLGYGFVNFVNP--------SDAERAISTLNGLRLQSKTIKVSFARPSSDAIKDANLYISGLPRTLSQQDVEDMFSHYGRIINSRVLVDQASGLSRGVAFIRFDKRAEADDAVKHLNGHTPPGSAEPITV 216
[Close]
BLAST of jgi.p|Trimin1|142416 vs. uniprot
Match: A0A667Y9X8_9TELE (ELAV-like protein n=2 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667Y9X8_9TELE)

HSP 1 Score: 125 bits (315), Expect = 1.360e-31
Identity = 70/170 (41.18%), Postives = 101/170 (59.41%), Query Frame = 1 
Query:    1 ANLIVNYLPHSLGDRRLVEMFAPHGVIAHAKVVRDRATGGSMGYGFVRFAGPPPPAXXXXXXXXXXIAALNGARVGGKHIRVSLARPSSEAIQNCKLHVAGMPPASRQADLEALCAPHGTVIECRVLINTATGRARGSAFVIFSVRAEAEAARAALDGLVMPGATRPLAV 510
             NLIVNYLP ++    L  +F+  G +  AK++RD+  G S+GYGFV F  P              I+ LNG R+  K I+VS ARPSS+AI++  L+++G+P    Q DLE +   +G +I  RVL++ A+G +RG AF+ F  R+EAE A   L+G   PG+  P+ V
Sbjct:   65 TNLIVNYLPQNMSQEELRSLFSSIGDVESAKLIRDKVAGHSLGYGFVNFVNP--------NDAERAISTLNGLRLQSKTIKVSYARPSSDAIKDANLYISGLPKTVTQQDLEEMFTRYGRIINSRVLVDQASGLSRGVAFIRFDKRSEAEDAIKYLNGHKPPGSAEPITV 226
[Close]
BLAST of jgi.p|Trimin1|142416 vs. uniprot
Match: A0A6I8TEB0_AEDAE (RNA-binding protein, putative n=27 Tax=Culicidae TaxID=7157 RepID=A0A6I8TEB0_AEDAE)

HSP 1 Score: 125 bits (313), Expect = 1.470e-31
Identity = 69/170 (40.59%), Postives = 98/170 (57.65%), Query Frame = 1 
Query:    1 ANLIVNYLPHSLGDRRLVEMFAPHGVIAHAKVVRDRATGGSMGYGFVRFAGPPPPAXXXXXXXXXXIAALNGARVGGKHIRVSLARPSSEAIQNCKLHVAGMPPASRQADLEALCAPHGTVIECRVLINTATGRARGSAFVIFSVRAEAEAARAALDGLVMPGATRPLAV 510
             NLIVNYLP  +    +  +F+  G +   K++RD+ TG S+GYGFV +                 I  LNG R+  K I+VS ARPSSEAI+   L+V+G+P    QADLE+L +P+G +I  R+L +  TG ++G  F+ F  R EAE A   L+G +  G+T P+ V
Sbjct:   22 TNLIVNYLPQQMTQEEIRSLFSSIGEVESCKLIRDKVTGQSLGYGFVNYQ--------RVEDASKAINTLNGLRLQNKQIKVSFARPSSEAIKGANLYVSGLPKNMLQADLESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRVEAEKAIKELNGTIPKGSTEPITV 183
[Close]
BLAST of jgi.p|Trimin1|142416 vs. uniprot
Match: A0A3Q2YEX9_HIPCM (ELAV-like protein n=8 Tax=Syngnathidae TaxID=72045 RepID=A0A3Q2YEX9_HIPCM)

HSP 1 Score: 125 bits (314), Expect = 1.490e-31
Identity = 70/170 (41.18%), Postives = 101/170 (59.41%), Query Frame = 1 
Query:    1 ANLIVNYLPHSLGDRRLVEMFAPHGVIAHAKVVRDRATGGSMGYGFVRFAGPPPPAXXXXXXXXXXIAALNGARVGGKHIRVSLARPSSEAIQNCKLHVAGMPPASRQADLEALCAPHGTVIECRVLINTATGRARGSAFVIFSVRAEAEAARAALDGLVMPGATRPLAV 510
             NLI+NYLP S+    L  +F+  G +  AK++RD+  G S+GYGFV F                 I++LNG R+  K I+VS ARPSS+ I++  L+++G+P    Q DLE + A +G +I  RVL++ A+G +RG AF+ F  RAEAE A   L+G   PG+  P+ V
Sbjct:   52 TNLIINYLPQSMNQDELRNLFSNVGEVESAKLIRDKVAGNSLGYGFVNFVN--------ASDAERAISSLNGLRLQSKTIKVSYARPSSDTIKDANLYISGLPRTISQQDLEDMFARYGHIINSRVLVDQASGLSRGVAFIRFDKRAEAEDAIKQLNGHTPPGSAEPITV 213
[Close]
BLAST of jgi.p|Trimin1|142416 vs. uniprot
Match: A0A182V896_ANOME (Uncharacterized protein n=7 Tax=Cellia TaxID=44534 RepID=A0A182V896_ANOME)

HSP 1 Score: 126 bits (316), Expect = 1.940e-31
Identity = 71/170 (41.76%), Postives = 98/170 (57.65%), Query Frame = 1 
Query:    1 ANLIVNYLPHSLGDRRLVEMFAPHGVIAHAKVVRDRATGGSMGYGFVRFAGPPPPAXXXXXXXXXXIAALNGARVGGKHIRVSLARPSSEAIQNCKLHVAGMPPASRQADLEALCAPHGTVIECRVLINTATGRARGSAFVIFSVRAEAEAARAALDGLVMPGATRPLAV 510
             NLIVNYLP  +    +  +F+  G +   K++RD+ TG S+GYGFV +                 I  LNG R+  K I+VS ARPSSEAI+   L+V+G+P    QADLEAL +P+G +I  R+L +  TG ++G  F+ F  R EAE A   L+G V  G+T P+ V
Sbjct:   21 TNLIVNYLPQQMTQEEIRSLFSSIGEVESCKLIRDKVTGQSLGYGFVNYQ--------RAEDASKAINTLNGLRLQNKQIKVSFARPSSEAIKGANLYVSGLPKNMLQADLEALFSPYGRIITSRILCDNITGLSKGVGFIRFDQRMEAEKAIKELNGTVPKGSTEPITV 182
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|142416 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZHQ1_9STRA1.720e-105100.00Hud and Au-rich element of the tumor necrosis fact... [more]
A0A836CBL9_9STRA1.350e-3462.75RNA-binding domain of Hu antigen C n=1 Tax=Tribone... [more]
A0A6J2W8N1_CHACN1.410e-3242.35ELAV-like protein n=1 Tax=Chanos chanos TaxID=2914... [more]
A0A6P4Z448_BRABE2.850e-3242.35ELAV-like protein 1 isoform X1 n=20 Tax=Branchiost... [more]
I2CPF3_NANGC8.000e-3242.94Elav-like protein 2 (Fragment) n=1 Tax=Nannochloro... [more]
I3J570_ORENI8.150e-3241.18ELAV-like protein n=29 Tax=Percomorphaceae TaxID=1... [more]
A0A667Y9X8_9TELE1.360e-3141.18ELAV-like protein n=2 Tax=Myripristis murdjan TaxI... [more]
A0A6I8TEB0_AEDAE1.470e-3140.59RNA-binding protein, putative n=27 Tax=Culicidae T... [more]
A0A3Q2YEX9_HIPCM1.490e-3141.18ELAV-like protein n=8 Tax=Syngnathidae TaxID=72045... [more]
A0A182V896_ANOME1.940e-3141.76Uncharacterized protein n=7 Tax=Cellia TaxID=44534... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_115contigContig_115:279736..281353 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|142416|gw1.115.35.1
BRITEko00000,ko00001,ko03019,ko03041
KEGG Pathwayko04152,ko04657,map04152,map04657
KEGG koko:K13088,ko:K13208
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003727,GO:0003729,GO:0003730,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005938,GO:0006139,GO:0006396,GO:0006397,GO:0006403,GO:0006417,GO:0006725,GO:0006807,GO:0007275,GO:0007369,GO:0008150,GO:0008152,GO:0008187,GO:0008266,GO:0008298,GO:0008380,GO:0009653,GO:0009790,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009987,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0016043,GO:0016070,GO:0016071,GO:0017091,GO:0019219,GO:0019222,GO:0019899,GO:0019900,GO:0019901,GO:0022607,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0034248,GO:0034250,GO:0034641,GO:0035198,GO:0035770,GO:0035925,GO:0036464,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043487,GO:0043488,GO:0043489,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045934,GO:0046483,GO:0046983,GO:0048255,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048598,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051259,GO:0051260,GO:0051641,GO:0060147,GO:0060149,GO:0060255,GO:0060964,GO:0060965,GO:0060966,GO:0060967,GO:0060968,GO:0060969,GO:0061013,GO:0061980,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0070935,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0099568,GO:1901360,GO:1901363,GO:1902369,GO:1902373,GO:1903311,GO:1903312,GO:1990904,GO:2000036,GO:2000112
Preferred nameELAVL1
DescriptionBelongs to the RRM elav family
COG categoryA
Max annot lvl33208|Metazoa
EggNOG OGsKOG0145@1|root,KOG0145@2759|Eukaryota,38BP4@33154|Opisthokonta,3BB30@33208|Metazoa,3CWH8@33213|Bilateria,486P2@7711|Chordata,48V2N@7742|Vertebrata,4A06F@7898|Actinopterygii
Evalue4.85e-33
Seed ortholog144197.XP_008295937.1
Hectar predicted targeting categoryother localisation
TranscriptId142738
TrackFilteredModels1
ProteinId142416
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|142416gene_11674Tribonema minus UTEX_B_3156 geneContig_115 279736..281353 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|142416Trimin1|142416|gw1.115.35.1Tribonema minus UTEX_B_3156 polypeptideContig_115 279736..281353 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11674_2exon_11674_2Tribonema minus UTEX_B_3156 exonContig_115 279736..279921 -
exon_11674_1exon_11674_1Tribonema minus UTEX_B_3156 exonContig_115 281030..281353 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11674CDS_11674Tribonema minus UTEX_B_3156 CDSContig_115 281030..281353 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11674 ID=mRNA_11674|Name=jgi.p|Trimin1|142416|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=510bp|location=Sequence derived from alignment at Contig_115:279736..281353- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCCAACCTCATCGTCAACTACCTGCCGCACTCGCTAGGCGACAGGCGACT
CGTGGAAATGTTCGCGCCGCACGGCGTCATCGCGCACGCCAAGGTCGTGC
GCGACCGCGCCACCGGCGGCAGCATGGGCTACGGCTTCGTGCGTTTCGCG
GGGCCGCCGCCGCCCGCGCCGCGCGCCGCGGACGCCGCCGCCGCCGCCAT
CGCCGCGCTCAACGGCGCGCGCGTCGGCGGCAAGCACATCCGCGTGAGCC
TCGCGCGCCCGAGCAGCGAGGCGATCCAGAACTGCAAGCTGCACGTCGCG
GGGATGCCGCCGGCATCCAGGCAAGCCGACCTGGAGGCGCTGTGCGCGCC
CCACGGCACCGTCATTGAGTGCCGCGTGCTCATCAACACAGCCACGGGCC
GCGCGCGCGGCTCCGCGTTCGTCATCTTCAGCGTGCGCGCCGAGGCGGAG
GCGGCGCGCGCCGCGCTCGACGGCCTCGTGATGCCCGGCGCGACGCGGCC
GCTCGCCGTC
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protein sequence of jgi.p|Trimin1|142416

>Trimin1|142416|gw1.115.35.1 ID=Trimin1|142416|gw1.115.35.1|Name=jgi.p|Trimin1|142416|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=170bp
ANLIVNYLPHSLGDRRLVEMFAPHGVIAHAKVVRDRATGGSMGYGFVRFA
GPPPPAPRAADAAAAAIAALNGARVGGKHIRVSLARPSSEAIQNCKLHVA
GMPPASRQADLEALCAPHGTVIECRVLINTATGRARGSAFVIFSVRAEAE
AARAALDGLVMPGATRPLAV
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mRNA from alignment at Contig_115:279736..281353-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11674 ID=mRNA_11674|Name=jgi.p|Trimin1|142416|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1618bp|location=Sequence derived from alignment at Contig_115:279736..281353- (Tribonema minus UTEX_B_3156 )
GCCAACCTCATCGTCAACTACCTGCCGCACTCGCTAGGCGACAGGCGACT
CGTGGAAATGTTCGCGCCGCACGGCGTCATCGCGCACGCCAAGGTCGTGC
GCGACCGCGCCACCGGCGGCAGCATGGGCTACGGCTTCGTGCGTTTCGCG
GGGCCGCCGCCGCCCGCGCCGCGCGCCGCGGACGCCGCCGCCGCCGCCAT
CGCCGCGCTCAACGGCGCGCGCGTCGGCGGCAAGCACATCCGCGTGAGCC
TCGCGCGCCCGAGCAGCGAGGCGATCCAGAACTGCAAGCTGCACGTCGCG
GGGATGCCGCCGGCATCCAGGCAAGTTGCAGCACGGCTCAGTCTCTACGT
GATGCTGCAACTTAGTGCGTGTCGTTTGCCTGCCTCGCGGCGCTGTGTTG
TGCGTCGTCGGACGCGGCGCGCCGATTGCAACGCGATCTGGGGTTCGGGT
TAGGTAAAGATGTGGCGACGGAGTGACTGACGCAAGGGGTTCATCGTGCT
TGCGACTGTGTTGCTGCATTCAGCCTTGCTGAGCGGTGATGACGGTATGT
ACGTAGGTGTGCTGGCTTCTCGCCATGGAGGAAAGTGACACTGCCCCTCA
GACCCAGCCTCAACAGGATGCGCCACATTACTGAGATAGTATGCGCAGTA
CAGTAGTCTTCACCGGGGGGGGGGGTCCTGTTACGCATCACTCATCTGGG
TGTCATGTGCATTGCGCACAACGCACTACGCACACGGCTGCCTGCGTGCG
CGCTTGTTCATTCCGCTTCCCTCACACGTCTCCCCCCTCTTGGTATCTCT
TGCACAAGCCCTGCGGTCTGAACTTGAGGCAAGTGCCACGTTGTGGGCTG
TCGAACGGGCTGCTTGCGCGTGCGCGATTTCTGCCCTTGTACAGCAATGT
TGCCCTGTCATACTGGTGCAGACCCCCCCCCCCCTTTCTCTCTTGCCGCA
TCTGCGCCCCTTGCGCAGCCCCAGCAGCGTGGCAGCGCTCAGCATCCTCA
ACACGACGGCACGCTGACAACTACCACCACTATCGTCCGCCTGTCTCAGC
TCGCTCACACCCTAAATCTTCTCCCTGACACAGCCCCTGTCTCCATCTCC
AAGTACGCGTAGCCGCATTAAACTCAGCGCTCTGAACAACTTGCCTGACC
CCCCCCCCCCCCCAACATTCACCGCCGCACAAGGCAGAACCGGCTTGACT
AACCCCCCCCAACAACCCCCCCCCCCCCACGCTGCAAGCGCAGGCAGGCC
GACCTGGAGGCGCTGTGTGCGCCGCACGCACCGTCATCGAGTGCTGCGTG
CTCATCAACACGGTGATCAAAGTCAGTGGTCTGCATGGCTGATCTGACAC
CCCCCCCAACATTCACCGCCGCACAAGGCAGAACTGGCTCGACTGACCCC
CTCCCCCCCTTGAATGCTGCGCGTGCAGGCAGGCCGACCTGGAGGCGCTG
TGCGCGCCCCACGGCACCGTCATTGAGTGCCGCGTGCTCATCAACACAGC
CACGGGCCGCGCGCGCGGCTCCGCGTTCGTCATCTTCAGCGTGCGCGCCG
AGGCGGAGGCGGCGCGCGCCGCGCTCGACGGCCTCGTGATGCCCGGCGCG
ACGCGGCCGCTCGCCGTC
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Coding sequence (CDS) from alignment at Contig_115:279736..281353-

>mRNA_11674 ID=mRNA_11674|Name=jgi.p|Trimin1|142416|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=510bp|location=Sequence derived from alignment at Contig_115:279736..281353- (Tribonema minus UTEX_B_3156 )
GCCAACCTCATCGTCAACTACCTGCCGCACTCGCTAGGCGACAGGCGACT
CGTGGAAATGTTCGCGCCGCACGGCGTCATCGCGCACGCCAAGGTCGTGC
GCGACCGCGCCACCGGCGGCAGCATGGGCTACGGCTTCGTGCGTTTCGCG
GGGCCGCCGCCGCCCGCGCCGCGCGCCGCGGACGCCGCCGCCGCCGCCAT
CGCCGCGCTCAACGGCGCGCGCGTCGGCGGCAAGCACATCCGCGTGAGCC
TCGCGCGCCCGAGCAGCGAGGCGATCCAGAACTGCAAGCTGCACGTCGCG
GGGATGCCGCCGGCATCCAGGCAAGCCGACCTGGAGGCGCTGTGCGCGCC
CCACGGCACCGTCATTGAGTGCCGCGTGCTCATCAACACAGCCACGGGCC
GCGCGCGCGGCTCCGCGTTCGTCATCTTCAGCGTGCGCGCCGAGGCGGAG
GCGGCGCGCGCCGCGCTCGACGGCCTCGTGATGCCCGGCGCGACGCGGCC
GCTCGCCGTC
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