mRNA_11643 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352306
Unique NamemRNA_11643
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|352306 vs. uniprot
Match: A0A835ZIS5_9STRA (N2227-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIS5_9STRA)

HSP 1 Score: 746 bits (1927), Expect = 1.250e-265
Identity = 543/543 (100.00%), Postives = 543/543 (100.00%), Query Frame = 3
Query:  189 MESHATSDDGDDCAVLFRAPPTVDQWNSVLALRLEKFREDLVTAVETLQRQIDYVEGRSPALAALWRAKLARIPPCWQVNLDALETLLRPVPFSLRSPCRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPPFAFAAAAAALEPGYDDAYAVLCHVVRDWSDDGAAARAAALAPILACLREYLPLPQCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPLILVPGAGLGRLAVELAARGWRVRANERSACMCAAAHAIIGGALRDCRGGGADADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGITVYPYLHDAPHDCVRSEARFRAVAFPDAAGRAAARRARRRLSWDCGDFLELYGPRRRGRSGSXXXXXXGAFDGVVTCFFLDTAPDVLEYVAALTHALRRGGVWVNLGPLHFHRESRVVASADELTAVLREAGFEVLRAAQLPPCEYRRGEPDSTATEQFRPLLWAARLTRGGGSSAXXXXSGDGSAGE 1817
            MESHATSDDGDDCAVLFRAPPTVDQWNSVLALRLEKFREDLVTAVETLQRQIDYVEGRSPALAALWRAKLARIPPCWQVNLDALETLLRPVPFSLRSPCRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPPFAFAAAAAALEPGYDDAYAVLCHVVRDWSDDGAAARAAALAPILACLREYLPLPQCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPLILVPGAGLGRLAVELAARGWRVRANERSACMCAAAHAIIGGALRDCRGGGADADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGITVYPYLHDAPHDCVRSEARFRAVAFPDAAGRAAARRARRRLSWDCGDFLELYGPRRRGRSGSXXXXXXGAFDGVVTCFFLDTAPDVLEYVAALTHALRRGGVWVNLGPLHFHRESRVVASADELTAVLREAGFEVLRAAQLPPCEYRRGEPDSTATEQFRPLLWAARLTRGGGSSAXXXXSGDGSAGE
Sbjct:    1 MESHATSDDGDDCAVLFRAPPTVDQWNSVLALRLEKFREDLVTAVETLQRQIDYVEGRSPALAALWRAKLARIPPCWQVNLDALETLLRPVPFSLRSPCRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPPFAFAAAAAALEPGYDDAYAVLCHVVRDWSDDGAAARAAALAPILACLREYLPLPQCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPLILVPGAGLGRLAVELAARGWRVRANERSACMCAAAHAIIGGALRDCRGGGADADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGITVYPYLHDAPHDCVRSEARFRAVAFPDAAGRAAARRARRRLSWDCGDFLELYGPRRRGRSGSXXXXXXGAFDGVVTCFFLDTAPDVLEYVAALTHALRRGGVWVNLGPLHFHRESRVVASADELTAVLREAGFEVLRAAQLPPCEYRRGEPDSTATEQFRPLLWAARLTRGGGSSAXXXXSGDGSAGE 543          
BLAST of jgi.p|Trimin1|352306 vs. uniprot
Match: A0A066V870_TILAU (N2227-domain-containing protein n=1 Tax=Tilletiaria anomala (strain ATCC 24038 / CBS 436.72 / UBC 951) TaxID=1037660 RepID=A0A066V870_TILAU)

HSP 1 Score: 103 bits (257), Expect = 7.140e-20
Identity = 98/365 (26.85%), Postives = 135/365 (36.99%), Query Frame = 3
Query:  687 DDAYAVLCHVVRDWSDDGAAARAAALAPILACLREYLP-----LPQCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPLILVPGAGLGRLAVELAARGWRVRANERSACMCAAAHAIIGGALRDCRGGGADADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGITVYPYLHDAPHDCVRSEARFRAVAFPDAAGRAAARRARRRLSWDCGDFLELYGPRRRGRSGSXXXXXXGAFDGVVTCFFLDTAPDVLEYVAALTHALRRGGVWVNLGPLHFHRES----RVVASADELTAVLREAGFEVLRAAQLPPCEYRRGEPDSTATEQFRPLLWAAR 1754
            D   + L   VRDWS+ G A R AA  PIL  L  YLP     LPQ                                      +LVPGAGLGRLA E+A RG+  + NE S  M  A+H I+    R                                                                  T+YPY+H A +     +     +  PD        +     S   G+F+E+Y                GA+D V TC+F+DTA +++ Y+  L H L  GG+WVN+GPL +H E+     +  + +E+  +L + GFEV+    LPP  Y  G      T ++ P  W AR
Sbjct:  174 DKVRSTLKQFVRDWSECGRAERDAAYQPILDALERYLPQLYARLPQAGRPLEDTQQRQVHADLR--------------------VLVPGAGLGRLAFEIAKRGFSCQGNEFSFFMLVASHFILNNTSR--------------------------------------------------------------VNEHTLYPYIHSASNWRTARDM-LAPIYIPDVLPNTLPSQVD--FSMVAGEFVEVYSKSEE----------RGAWDAVATCYFIDTARNIMRYLETLNHILPLGGLWVNVGPLLWHYENGGDLSIELTLEEVLGLLPKMGFEVVERRSLPPQMYT-GNAAGMLTYEYHPEFWIAR 442          
BLAST of jgi.p|Trimin1|352306 vs. uniprot
Match: A0A7S1YZ25_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YZ25_9STRA)

HSP 1 Score: 102 bits (254), Expect = 3.010e-19
Identity = 106/375 (28.27%), Postives = 146/375 (38.93%), Query Frame = 3
Query:  681 GYDDAYAVLCHVVRDWSDDGAAARAAALAPILACLREYLPLPQCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPLILVPGAGLGRLAVELA-ARGWR--VRANERSACMCAAAHAIIGGALRDCRGGGADADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGITVYPYLHDAPHDCVRSEARFRAVAFPDAAGRAAARRARRRLSWDCGDFLELYG-PRRRGRSGSXXXXXXGAFDGVVTCFFLDTAPDVLEYVAALTHALR---RGGVWVNLGPLHFHRESRVVASADELTAVLREAGFEVLR-AAQLPPCEYRRGE----------PDSTATEQFRPLLWAA 1751
            GYD A  V+ HV RDW+D G   R      +L   +E L   +                                      ILVPGAGLGRLA ++A A G +  V AN+ SA M  AA +++   L        D+D                                                        T+YP++ D   + V S  RF +V FPD     AARR    LS+  GDF+  Y  P +RG+           FD + T FF+DTA +V EYVA + H LR    G VW+N+GP+ +H  + +  + DE   +L  +GFE+L+         YR  +          P  T  E +RPL + A
Sbjct:  216 GYDSALQVITHVARDWTDGGHQCRQMTNGWLL---KELLSWHENTFKRKINGGGVDQDGIS--------------------ILVPGAGLGRLAFDIATATGLKGVVEANDSSAIMAVAARSMLANVLAMNDKSDNDSDKKTSSLT-------------------------------------------------TIYPFVLDPKTNEVDSRLRFDSVVFPDDLAIEAARRTLPNLSYTVGDFIATYSSPAKRGK-----------FDAIATSFFVDTAANVYEYVAIMKHLLRSSPEGSVWINVGPIQWHPCALLRPTVDEFRDILTASGFELLKWEVSTEAVGYRHPDDAGTMDPSSPPRKTRCESYRPLRFVA 507          
BLAST of jgi.p|Trimin1|352306 vs. uniprot
Match: A0A1Z5JPV2_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPV2_FISSO)

HSP 1 Score: 98.6 bits (244), Expect = 2.320e-18
Identity = 63/171 (36.84%), Postives = 92/171 (53.80%), Query Frame = 3
Query: 1257 VYPYLHDAPHDCVRSEARFRAVAFPDAAGRAAARRARRRLSWDCGDFLELYGPRRRGRSGSXXXXXXGAFDGVVTCFFLDTAPDVLEYVAALTHALR-RGGVWVNLGPLHFHRESRVVASADELTAVLREAGFEVLR-AAQLPPCEYRRGEP--DSTATEQFRPLLWAARL 1757
            ++PY  D   + V S  R+  V +PD    +     +  LS+   DFL L G                 FD VVTCFFLDTA +VLEY+  +T  LR +GG+WVN+GPL +H++S++  SADEL  ++ E GF+++     + P EYR  +    ST  + + PL + A L
Sbjct:  260 IHPYSSDQLSNEVNSSQRYLRVQYPDVDDLST---KQGHLSYTVADFLSLNG----------VVNNQSKFDVVVTCFFLDTASNVLEYITMITKLLRPKGGMWVNVGPLQWHQKSQIRFSADELYNIIEEVGFQIMEWGVDVAPIEYRSSDKVVRSTHYDAYCPLRFVAVL 417          
BLAST of jgi.p|Trimin1|352306 vs. uniprot
Match: B7PLJ4_IXOSC (Carnosine N-methyltransferase n=7 Tax=Ixodes TaxID=6944 RepID=B7PLJ4_IXOSC)

HSP 1 Score: 96.7 bits (239), Expect = 3.560e-18
Identity = 96/347 (27.67%), Postives = 136/347 (39.19%), Query Frame = 3
Query:  687 DDAYAVLCHVVRDWSDDGAAARAAALAPILACLREYLPLPQCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPLILVPGAGLGRLAVELAARGWRVRANERSACMCAAAHAIIGGALRDCRGGGADADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGITVYPYLHDAPHDCVRSEARFRAVAFPDAAGRAAARRARRRLSWDCGDFLELYGPRRRGRSGSXXXXXXGAFDGVVTCFFLDTAPDVLEYVAALTHALRRGGVWVNLGPLHFH-----RESRVVASADELTAVLREAGFEVL----RAAQLPPCEYRRG 1700
            D    VL   VR+WSD+GA  R A   PI+  + E+ P  +                                   +  +LVPGAGLGRLA E+A RG+  + NE S  M  A++ I    L  C+G                                                              TVYP++H   ++ + S  + RA  FPDA        A+   S   G+F+E+Y  +             G +D V TCFFLDTAP+V+ Y+  +   LR GG+WVNLGPL +H      E+ +  S +++  V+   GF +L    R A +P    RRG
Sbjct:   92 DKVQGVLKQFVREWSDEGADERRACFQPIIDAIVEHFPFEE-------------------------------IDPRMVKVLVPGAGLGRLAYEIARRGYCCQGNEFSLFMLFASNFI----LNSCKGTNL----------------------------------------------------------YTVYPWVHQY-YNHMTSADQVRAACFPDADPTEVPSDAQ--FSMAAGNFVEVYSSQA------------GQWDCVATCFFLDTAPNVVVYIETIYRTLRPGGIWVNLGPLLYHYADLPNENSIEPSYEDVKHVILSFGFLMLASAPRVAPVPAGSRRRG 330          
BLAST of jgi.p|Trimin1|352306 vs. uniprot
Match: A0A6A6Q0V7_9PEZI (N2227-like protein-domain-containing protein n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6Q0V7_9PEZI)

HSP 1 Score: 94.7 bits (234), Expect = 4.640e-17
Identity = 99/409 (24.21%), Postives = 141/409 (34.47%), Query Frame = 3
Query:  687 DDAYAVLCHVVRDWSDDGAAARAAALAPILACLREYLPLPQCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPLILVPGAGLGRLAVELAARGWRVRANERSACMCAAAHAIIGGALRDCRGGGADADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGITVYPYLHDAPHDCVRSEARFRAVAFPD----------AAGRAAARRARRRLSWDCGDFLELYGPRRRGRSGSXXXXXXGAFDGVVTCFFLDTAPDVLEYVAALTHALRRGGVWVNLGPLHFHRESRVVA-------------------------------------------SADELTAVLREAGFEVLRAAQLPPCEYRRGEPDSTATEQFRPLLWAAR 1754
            D A + +    RDWSD+G+A R AA +PI   L  +LP  + A                                    +LVPGAGLGRL ++L   G+ V  NE S     A+H I+                                                                    G   +YP+  +  +   R+  + +AVA PD          AA   ++     R+S   GDF +LY                G+FD VVTCFF+DTAP+++ Y+  + H L+ GGVW+NLGPL +H ES                                               + DE+ A++   GFE+L     P   Y + +P S     +RP  W AR
Sbjct:  120 DKARSTIRQFYRDWSDEGSAERHAAYSPIFTALSTHLPANRPADRHRQR------------------------------VLVPGAGLGRLVLDLCLAGYTVEGNEISYHQLLASHYILN--------------------------------------------------------------YTSTAGQHRLYPWALNFSNHLTRAH-QLQAVAIPDVHPATTLETTAADTQSSVHYSERMSMTAGDFCQLY----------RQAEYEGSFDSVVTCFFIDTAPNIISYIETIKHCLKPGGVWINLGPLLWHFESTPTXXXXXXXXXXXXXXXXXXXXXXXXSHHSARGRNEGIGEPGSFELANDEVLALVERFGFEMLEQKPAPETGYIQ-DPTSMLQNVYRPAFWVAR 424          
BLAST of jgi.p|Trimin1|352306 vs. uniprot
Match: A0A1Z5JBY6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JBY6_FISSO)

HSP 1 Score: 93.2 bits (230), Expect = 1.380e-16
Identity = 61/171 (35.67%), Postives = 90/171 (52.63%), Query Frame = 3
Query: 1257 VYPYLHDAPHDCVRSEARFRAVAFPDAAGRAAARRARRRLSWDCGDFLELYGPRRRGRSGSXXXXXXGAFDGVVTCFFLDTAPDVLEYVAALTHALR-RGGVWVNLGPLHFHRESRVVASADELTAVLREAGFEVLR-AAQLPPCEYRRGEP--DSTATEQFRPLLWAARL 1757
            ++P+  D   + V S  R+  V +PD             LS+   DFL L          S         D VVTCFFLDTA +VLEY+A +T  L+ +GG+WVN+GPL +H++S +  SADEL +++ E GF+++     + P EYR  +    ST  + + PL + A L
Sbjct:  258 IHPFSSDQFSNEVNSSHRYLRVQYPDVDD---VEIFEGHLSYTVADFLSL---------NSVLGNNQSQLDAVVTCFFLDTATNVLEYIAMITKLLKPKGGMWVNVGPLQWHQKSLIRLSADELYSLIEEVGFKIMEWGVDVAPIEYRSSDKLVRSTHYDAYCPLRFVAVL 416          
BLAST of jgi.p|Trimin1|352306 vs. uniprot
Match: UPI00200DC1ED (carnosine N-methyltransferase-like n=1 Tax=Leguminivora glycinivorella TaxID=1035111 RepID=UPI00200DC1ED)

HSP 1 Score: 92.0 bits (227), Expect = 2.400e-16
Identity = 93/361 (25.76%), Postives = 140/361 (38.78%), Query Frame = 3
Query:  687 DDAYAVLCHVVRDWSDDGAAARAAALAPILACLREYLPLPQCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPLILVPGAGLGRLAVELAARGWRVRANERSACMCAAAHAIIGGALRDCRGGGADADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGITVYPYLHDAPHDCVRSEARFRAVAFPDAAGRAAARRARRRLSWDCGDFLELYGPRRRGRSGSXXXXXXGAFDGVVTCFFLDTAPDVLEYVAALTHALRRGGVWVNLGPLHFH-----RESRVVASADELTAVLREAGFEVLRAAQLPPCEYRRGEPDSTATEQFRPLLWAAR 1754
            D   +VL ++VRDWS  GAA R     PIL  + E  PL + +                                    +LVPGAGLGRLA E+AARG+  + NE S  M  A++ I    L  C                                                                TV+P+LH   ++ V  E + +AV FPD   R  A R     S   GDFL++Y    +             ++ V +CFF+D AP+V+E++  +   L  GG W+NLGPL +H      E+ +    D L  ++R+ GF++L+       +Y +  P+S    ++  + +  R
Sbjct:  127 DKVVSVLKNIVRDWSALGAAERDQCYKPILEEMEERFPLDEYSERSRVK------------------------------VLVPGAGLGRLAWEIAARGYSCQGNEFSLFMLFASNFI----LNRC----------------------------------------------------------PEANKYTVHPWLHQYVNN-VTCEHQLQAVTFPDV--RPGAERPNHHFSMTAGDFLKVYTEAEQ-------------WNCVASCFFIDCAPNVIEFIERIYSILEPGGYWINLGPLLYHYSDMPSENSIEPPYDILLEIIRDIGFDILKEQTGVKTKYAQN-PNSMMQHEYDSVFFVCR 378          
BLAST of jgi.p|Trimin1|352306 vs. uniprot
Match: A0A8J5Y2X4_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5Y2X4_DIALT)

HSP 1 Score: 91.7 bits (226), Expect = 2.990e-16
Identity = 95/336 (28.27%), Postives = 130/336 (38.69%), Query Frame = 3
Query:  705 LCHVVRDWSDDGAAARAAALAPILACLREYLPLPQCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPLILVPGAGLGRLAVELAARGWRVRANERSACMCAAAHAIIGGALRDCRGGGADADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGITVYPYLHDAPHDCVRSEA-RFRAVAFPDAAGRAAARRARRRLSWDCGDFLELYGPRRRGRSGSXXXXXXGAFDGVVTCFFLDTAPDVLEYVAALTHALRRGGVWVNLGPLHFH------RESRVVASADELTAVLREAGFEVLRAAQLPPCEY 1691
            L  + RDW+++GAA RAA   P+LA +   LP    A                                    +LVPGAGLGRLA E AARG+  + NE S  M  A++ ++  A          AD                                                     G + +YPY+H + +  VR+ A + R V  PD         A    S   GDFL +Y  +             G +D ++TCFF+DTA DV +YV  +  ALR GGVW N+GPL +H       E  +  S +EL A++   GF +     LPP  Y
Sbjct:  123 LKQLARDWAEEGAAERAACYGPLLADIERLLPSESAARPNAK-------------------------------VLVPGAGLGRLAWECAARGFACQGNEVSYFMLLASNFVLNHA----------ADL----------------------------------------------------GQLEIYPYVHQSIN--VRAPADQLRPVPLPDTDPSRLP--AHTPFSMCAGDFLAIYANQ------------PGEWDCILTCFFIDTARDVSQYVRTIHAALRPGGVWCNVGPLLYHWAEMGPAEFSIELSWEELRALIVAHGFAIELEEWLPPMTY 349          
BLAST of jgi.p|Trimin1|352306 vs. uniprot
Match: UPI001886EA3C (carnosine N-methyltransferase-like n=3 Tax=Rhipicephalinae TaxID=426437 RepID=UPI001886EA3C)

HSP 1 Score: 91.3 bits (225), Expect = 4.490e-16
Identity = 94/361 (26.04%), Postives = 138/361 (38.23%), Query Frame = 3
Query:  687 DDAYAVLCHVVRDWSDDGAAARAAALAPILACLREYLPLPQCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPLILVPGAGLGRLAVELAARGWRVRANERSACMCAAAHAIIGGALRDCRGGGADADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGITVYPYLHDAPHDCVRSEARFRAVAFPDAAGRAAARRARRRLSWDCGDFLELYGPRRRGRSGSXXXXXXGAFDGVVTCFFLDTAPDVLEYVAALTHALRRGGVWVNLGPLHFH-----RESRVVASADELTAVLREAGFEVLRAAQLPPCEYRRGEPDSTATEQFRPLLWAAR 1754
            D   AVL   VR+WS +GA  R A   PIL  + E+ PL +                                      ILVPGAGLGRLA E+A +G+  + NE S  M  A++ I    L  C+G                                                               VYP++H   ++ + S  + R   FPDA        A+   S   G+F+E+YG +               +D V TCFFLDTAP+V+ Y+  + H LR GG+W+NLGPL +H      E  +  S +++  ++   GF  L+     P  Y +  P S    ++R + +  +
Sbjct:  113 DKVQAVLKQFVREWSSEGAEERRACFQPILDAISEHFPLNEVDPSTIH-------------------------------ILVPGAGLGRLAYEIARQGYCCQGNEFSLFMLFASNFI----LNRCKGTNLHI----------------------------------------------------------VYPWVHQY-YNHMASTDQIRPAQFPDANPSDVPPEAQ--FSMAAGNFVEVYGSQLE------------QWDCVSTCFFLDTAPNVVVYIETIAHILRPGGLWINLGPLLYHYADLPNEDSIEPSYEDVRNIILTMGFIFLKEETGIPTPYTQN-PRSMMRYEYRSVFFVCQ 364          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352306 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZIS5_9STRA1.250e-265100.00N2227-like protein-domain-containing protein n=1 T... [more]
A0A066V870_TILAU7.140e-2026.85N2227-domain-containing protein n=1 Tax=Tilletiari... [more]
A0A7S1YZ25_9STRA3.010e-1928.27Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1Z5JPV2_FISSO2.320e-1836.84Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
B7PLJ4_IXOSC3.560e-1827.67Carnosine N-methyltransferase n=7 Tax=Ixodes TaxID... [more]
A0A6A6Q0V7_9PEZI4.640e-1724.21N2227-like protein-domain-containing protein n=1 T... [more]
A0A1Z5JBY6_FISSO1.380e-1635.67Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
UPI00200DC1ED2.400e-1625.76carnosine N-methyltransferase-like n=1 Tax=Legumin... [more]
A0A8J5Y2X4_DIALT2.990e-1628.27Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
UPI001886EA3C4.490e-1626.04carnosine N-methyltransferase-like n=3 Tax=Rhipice... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_115contigContig_115:87612..90369 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352306|estExt_Genemark1.C_Ctg_1150014
DescriptionN2227
COG categoryG
Max annot lvl2836|Bacillariophyta
EggNOG OGsKOG2798@1|root,KOG2798@2759|Eukaryota,2XCRM@2836|Bacillariophyta
Evalue1.11e-15
Seed ortholog159749.K0SW67
Hectar predicted targeting categoryother localisation
TranscriptId352628
TrackFilteredModels1
ProteinId352306
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352306gene_11643Tribonema minus UTEX_B_3156 geneContig_115 87612..90369 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352306Trimin1|352306|estExt_Genemark1.C_Ctg_1150014Tribonema minus UTEX_B_3156 polypeptideContig_115 87612..89529 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11643_3exon_11643_3Tribonema minus UTEX_B_3156 exonContig_115 87612..89105 -
exon_11643_2exon_11643_2Tribonema minus UTEX_B_3156 exonContig_115 89392..89597 -
exon_11643_1exon_11643_1Tribonema minus UTEX_B_3156 exonContig_115 90250..90369 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11643CDS_11643Tribonema minus UTEX_B_3156 CDSContig_115 89392..89529 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_11643UTR5_11643Tribonema minus UTEX_B_3156 five_prime_UTRContig_115 90250..90369 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11643 ID=mRNA_11643|Name=jgi.p|Trimin1|352306|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1820bp|location=Sequence derived from alignment at Contig_115:87612..90369- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGCGTGTTCTTCGTTAGTCTTCATTGAACCTTGCAGAGCAGCCATTAGCA
GAAGGCGGCATGGCACGTCCCGGCCAGCAGCGGGCGCAATCCTGTGTGTT
TCAGCACAAAATAGACGGAGGGCGGTGGCCGATGAACGCTGCTGAGCACT
GCTGCTGAACAGCGCAGGCAGCGACGGCGCGTGCCGCAATGGAGAGTCAC
GCCACCAGCGACGACGGCGACGACTGTGCTGTGCTGTTCCGAGCCCCGCC
TACTGTGGATCAGTGGAACAGCGTGCTGGCTCTGCGACTTGAGAAGTTTC
GCGAAGATCTCGTCACGGCAGTTGAGACCCTGCAGCGGCAGATCGACTAC
GTCGAAGGCAGGTCCCCCGCCCTCGCGGCGCTGTGGCGCGCCAAGCTCGC
GCGCATACCCCCCTGCTGGCAGGTCAACCTGGACGCCCTCGAGACGCTGC
TGCGCCCGGTGCCGTTTTCCCTCCGATCGCCGTGCCGCAGCAGCAGCAGC
AGCAGCGCTCATGTACTGCCCGAGGACGACGCAGGTACCAGCAGCGCAGG
CGGCGATGACGACTGCGCCATCCGCAGCACTTGCGGCGCCGCCGCCGCGC
TGCAGCTTGTGCCTCGCGCCGCTCCGCCGCCACGCTGCCCGCCCTTCGCC
TTCGCTGCGGCGGCGGCGGCGCTGGAGCCCGGCTACGACGACGCCTACGC
CGTGCTGTGCCACGTGGTGCGCGACTGGAGCGACGACGGCGCGGCCGCAC
GCGCCGCAGCGCTAGCGCCCATCCTCGCGTGCCTCCGCGAGTACCTGCCG
CTGCCGCAGTGCGCGACGGCAGCGGCGGCCCCGGCGGCAGCGGCGGCGGC
GGAGACGGAGGCGGAGGCGGAGGCGGAGGCGGCGGCACCGGCAGCGGCGG
CAGGCGACGGCGAGGTGCCGCTGATTCTGGTGCCGGGCGCGGGGCTGGGA
AGGCTCGCGGTGGAGCTGGCGGCGCGCGGGTGGCGCGTGCGCGCCAACGA
GCGCAGCGCCTGCATGTGCGCCGCGGCGCACGCAATCATCGGCGGCGCGC
TGCGTGACTGCCGCGGCGGCGGCGCTGACGCTGACAGCTCTGGCGGCGCT
GGTGCTGCGGTCGGCGAAAGCAGCAGCGGCGGCGGCGGCGGCGGCGGCGG
CGGCGATGGCACGCACTCACGCGGCGGCGGCGGCGGCGGCGGCAGCGGCG
GCGGCGGCGGCAGCGGCGGGGGTGGCAGCGCAGGCGGCGGCGCAGGCGGC
ATCACCGTGTACCCATATTTACATGACGCGCCGCATGACTGCGTGCGGTC
GGAGGCGCGTTTCCGTGCCGTGGCCTTCCCCGACGCCGCCGGCCGTGCCG
CCGCGCGACGCGCGCGCAGGCGCCTCTCCTGGGACTGCGGCGACTTCCTG
GAGCTGTACGGGCCGCGGCGCCGCGGCCGCAGCGGCAGCGGCGGCAGCGG
CGGCGGCGGCGCCTTCGACGGCGTTGTCACGTGCTTCTTCCTAGATACGG
CGCCGGACGTGCTGGAGTACGTCGCGGCGCTCACGCACGCGCTGCGGCGC
GGCGGCGTCTGGGTCAACCTCGGGCCGCTGCACTTCCACCGCGAGTCGCG
CGTCGTCGCGAGCGCCGACGAGCTGACGGCGGTGCTGCGTGAGGCGGGCT
TCGAGGTGCTGCGCGCGGCGCAGCTGCCGCCGTGCGAGTACCGGCGCGGC
GAGCCCGACAGCACGGCAACGGAGCAGTTCAGGCCGCTGCTGTGGGCGGC
GCGCCTGACGCGCGGCGGCGGCAGCAGCGCCGGCGGTGGCGGCAGCGGCG
ACGGCAGTGCTGGAGAGTGA
back to top

protein sequence of jgi.p|Trimin1|352306

>Trimin1|352306|estExt_Genemark1.C_Ctg_1150014 ID=Trimin1|352306|estExt_Genemark1.C_Ctg_1150014|Name=jgi.p|Trimin1|352306|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=544bp
MESHATSDDGDDCAVLFRAPPTVDQWNSVLALRLEKFREDLVTAVETLQR
QIDYVEGRSPALAALWRAKLARIPPCWQVNLDALETLLRPVPFSLRSPCR
SSSSSSAHVLPEDDAGTSSAGGDDDCAIRSTCGAAAALQLVPRAAPPPRC
PPFAFAAAAAALEPGYDDAYAVLCHVVRDWSDDGAAARAAALAPILACLR
EYLPLPQCATAAAAPAAAAAAETEAEAEAEAAAPAAAAGDGEVPLILVPG
AGLGRLAVELAARGWRVRANERSACMCAAAHAIIGGALRDCRGGGADADS
SGGAGAAVGESSSGGGGGGGGGDGTHSRGGGGGGGSGGGGGSGGGGSAGG
GAGGITVYPYLHDAPHDCVRSEARFRAVAFPDAAGRAAARRARRRLSWDC
GDFLELYGPRRRGRSGSGGSGGGGAFDGVVTCFFLDTAPDVLEYVAALTH
ALRRGGVWVNLGPLHFHRESRVVASADELTAVLREAGFEVLRAAQLPPCE
YRRGEPDSTATEQFRPLLWAARLTRGGGSSAGGGGSGDGSAGE*
back to top

mRNA from alignment at Contig_115:87612..90369-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11643 ID=mRNA_11643|Name=jgi.p|Trimin1|352306|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2758bp|location=Sequence derived from alignment at Contig_115:87612..90369- (Tribonema minus UTEX_B_3156 )
GGCGTGTTCTTCGTTAGTCTTCATTGAACCTTGCAGAGCAGCCATTAGCA GAAGGCGGCATGGCACGTCCCGGCCAGCAGCGGGCGCAATCCTGTGTGTT TCAGCACAAAATAGACGGAGGTGAGGTTGTGGTGCAGCGGTGAAGGACCA GATGCTGCTCTGGGGAGGCCATACTTTCCTGCTCATAGCTGGCGCATCTG GCAACCGTGTCTTCGTCTTAGCCAGTACAGGCAAAGTGCACTTTGTAGAT GTGTCAAAATAAAGCCAGTACCTGAAGTTGTAGGTTGTTCTTACAGTTGT AGGTTGTTCTTAGACAACGTAAGCTCTCGACATGCTGTCTTACACACCAC CAATCAATGGCAGCTCTCAGAGTTTCATCCAAGTCTCAAAGACCACCAGC AGCCTCAGAGAAAGCCGGAAGCATGCAATGAACTGAAACGGTGCCTTGGC ACCGACTTCTCCTGTCTCCCGAGTCCAAGACTCTGGCGGGCTCACAAGCA CTGCAGCCTAGGCGACGGCAGTGGCTCGCTCCACCACGATCCGCAGCACA AGGTACCGCCGCCGTCGCTGACCCCAGTCAGTGGAGGCGGTCTGCCACTG CATCTGTGTCCTAAATGGTGCAGCTCTCGCCGTGCTTGTATGATGAGCGT GACGTGACACTGTGCGATCTGACGCCATCGCTGTATCGAAGCATCCTGCG ACGGCCTGGATCGGGTGCCTGCGCCTCATGTGACCCCCCCCCTCCCCACC CACACACACACACGATTTGCAGGGCGGTGGCCGATGAACGCTGCTGAGCA CTGCTGCTGAACAGCGCAGGCAGCGACGGCGCGTGCCGCAATGGAGAGTC ACGCCACCAGCGACGACGGCGACGACTGTGCTGTGCTGTTCCGAGCCCCG CCTACTGTGGATCAGTGGAACAGCGTGCTGGCTCTGCGACTTGAGAAGTT TCGCGAAGATCTCGTCACGGCAGTTGAGGTACGTTCTGTGCCGCTGCCTT GTGCACGCGCGGCTGCCGCTGCTTCTGCTGCTGCCGTTGGCGCTGGTGTG CTGCTGCGCTCGTGCGACTGCTCTGCTCCTGCGACTGCTCTGCTGCTGCT GCTGCTGCTGCTGCTGCTGCTGCAGCTCACCATGAGAATGCCGCATTTAT GGCGAGCCACGCATTCACCACTGCGGCACAGGGCATCACGCAGCAGCTTC CCTTCTGAGCTGCAAAGCCCGTCGCGTCGTTAACGCCATCGCCACCGTCC CGCTGCCCGCGCAGACCCTGCAGCGGCAGATCGACTACGTCGAAGGCAGG TCCCCCGCCCTCGCGGCGCTGTGGCGCGCCAAGCTCGCGCGCATACCCCC CTGCTGGCAGGTCAACCTGGACGCCCTCGAGACGCTGCTGCGCCCGGTGC CGTTTTCCCTCCGATCGCCGTGCCGCAGCAGCAGCAGCAGCAGCGCTCAT GTACTGCCCGAGGACGACGCAGGTACCAGCAGCGCAGGCGGCGATGACGA CTGCGCCATCCGCAGCACTTGCGGCGCCGCCGCCGCGCTGCAGCTTGTGC CTCGCGCCGCTCCGCCGCCACGCTGCCCGCCCTTCGCCTTCGCTGCGGCG GCGGCGGCGCTGGAGCCCGGCTACGACGACGCCTACGCCGTGCTGTGCCA CGTGGTGCGCGACTGGAGCGACGACGGCGCGGCCGCACGCGCCGCAGCGC TAGCGCCCATCCTCGCGTGCCTCCGCGAGTACCTGCCGCTGCCGCAGTGC GCGACGGCAGCGGCGGCCCCGGCGGCAGCGGCGGCGGCGGAGACGGAGGC GGAGGCGGAGGCGGAGGCGGCGGCACCGGCAGCGGCGGCAGGCGACGGCG AGGTGCCGCTGATTCTGGTGCCGGGCGCGGGGCTGGGAAGGCTCGCGGTG GAGCTGGCGGCGCGCGGGTGGCGCGTGCGCGCCAACGAGCGCAGCGCCTG CATGTGCGCCGCGGCGCACGCAATCATCGGCGGCGCGCTGCGTGACTGCC GCGGCGGCGGCGCTGACGCTGACAGCTCTGGCGGCGCTGGTGCTGCGGTC GGCGAAAGCAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGATGGCAC GCACTCACGCGGCGGCGGCGGCGGCGGCGGCAGCGGCGGCGGCGGCGGCA GCGGCGGGGGTGGCAGCGCAGGCGGCGGCGCAGGCGGCATCACCGTGTAC CCATATTTACATGACGCGCCGCATGACTGCGTGCGGTCGGAGGCGCGTTT CCGTGCCGTGGCCTTCCCCGACGCCGCCGGCCGTGCCGCCGCGCGACGCG CGCGCAGGCGCCTCTCCTGGGACTGCGGCGACTTCCTGGAGCTGTACGGG CCGCGGCGCCGCGGCCGCAGCGGCAGCGGCGGCAGCGGCGGCGGCGGCGC CTTCGACGGCGTTGTCACGTGCTTCTTCCTAGATACGGCGCCGGACGTGC TGGAGTACGTCGCGGCGCTCACGCACGCGCTGCGGCGCGGCGGCGTCTGG GTCAACCTCGGGCCGCTGCACTTCCACCGCGAGTCGCGCGTCGTCGCGAG CGCCGACGAGCTGACGGCGGTGCTGCGTGAGGCGGGCTTCGAGGTGCTGC GCGCGGCGCAGCTGCCGCCGTGCGAGTACCGGCGCGGCGAGCCCGACAGC ACGGCAACGGAGCAGTTCAGGCCGCTGCTGTGGGCGGCGCGCCTGACGCG CGGCGGCGGCAGCAGCGCCGGCGGTGGCGGCAGCGGCGACGGCAGTGCTG GAGAGTGA
back to top

Coding sequence (CDS) from alignment at Contig_115:87612..90369-

>mRNA_11643 ID=mRNA_11643|Name=jgi.p|Trimin1|352306|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1632bp|location=Sequence derived from alignment at Contig_115:87612..90369- (Tribonema minus UTEX_B_3156 )
ATGGAGAGTCACGCCACCAGCGACGACGGCGACGACTGTGCTGTGCTGTT
CCGAGCCCCGCCTACTGTGGATCAGTGGAACAGCGTGCTGGCTCTGCGAC
TTGAGAAGTTTCGCGAAGATCTCGTCACGGCAGTTGAGACCCTGCAGCGG
CAGATCGACTACGTCGAAGGCAGGTCCCCCGCCCTCGCGGCGCTGTGGCG
CGCCAAGCTCGCGCGCATACCCCCCTGCTGGCAGGTCAACCTGGACGCCC
TCGAGACGCTGCTGCGCCCGGTGCCGTTTTCCCTCCGATCGCCGTGCCGC
AGCAGCAGCAGCAGCAGCGCTCATGTACTGCCCGAGGACGACGCAGGTAC
CAGCAGCGCAGGCGGCGATGACGACTGCGCCATCCGCAGCACTTGCGGCG
CCGCCGCCGCGCTGCAGCTTGTGCCTCGCGCCGCTCCGCCGCCACGCTGC
CCGCCCTTCGCCTTCGCTGCGGCGGCGGCGGCGCTGGAGCCCGGCTACGA
CGACGCCTACGCCGTGCTGTGCCACGTGGTGCGCGACTGGAGCGACGACG
GCGCGGCCGCACGCGCCGCAGCGCTAGCGCCCATCCTCGCGTGCCTCCGC
GAGTACCTGCCGCTGCCGCAGTGCGCGACGGCAGCGGCGGCCCCGGCGGC
AGCGGCGGCGGCGGAGACGGAGGCGGAGGCGGAGGCGGAGGCGGCGGCAC
CGGCAGCGGCGGCAGGCGACGGCGAGGTGCCGCTGATTCTGGTGCCGGGC
GCGGGGCTGGGAAGGCTCGCGGTGGAGCTGGCGGCGCGCGGGTGGCGCGT
GCGCGCCAACGAGCGCAGCGCCTGCATGTGCGCCGCGGCGCACGCAATCA
TCGGCGGCGCGCTGCGTGACTGCCGCGGCGGCGGCGCTGACGCTGACAGC
TCTGGCGGCGCTGGTGCTGCGGTCGGCGAAAGCAGCAGCGGCGGCGGCGG
CGGCGGCGGCGGCGGCGATGGCACGCACTCACGCGGCGGCGGCGGCGGCG
GCGGCAGCGGCGGCGGCGGCGGCAGCGGCGGGGGTGGCAGCGCAGGCGGC
GGCGCAGGCGGCATCACCGTGTACCCATATTTACATGACGCGCCGCATGA
CTGCGTGCGGTCGGAGGCGCGTTTCCGTGCCGTGGCCTTCCCCGACGCCG
CCGGCCGTGCCGCCGCGCGACGCGCGCGCAGGCGCCTCTCCTGGGACTGC
GGCGACTTCCTGGAGCTGTACGGGCCGCGGCGCCGCGGCCGCAGCGGCAG
CGGCGGCAGCGGCGGCGGCGGCGCCTTCGACGGCGTTGTCACGTGCTTCT
TCCTAGATACGGCGCCGGACGTGCTGGAGTACGTCGCGGCGCTCACGCAC
GCGCTGCGGCGCGGCGGCGTCTGGGTCAACCTCGGGCCGCTGCACTTCCA
CCGCGAGTCGCGCGTCGTCGCGAGCGCCGACGAGCTGACGGCGGTGCTGC
GTGAGGCGGGCTTCGAGGTGCTGCGCGCGGCGCAGCTGCCGCCGTGCGAG
TACCGGCGCGGCGAGCCCGACAGCACGGCAACGGAGCAGTTCAGGCCGCT
GCTGTGGGCGGCGCGCCTGACGCGCGGCGGCGGCAGCAGCGCCGGCGGTG
GCGGCAGCGGCGACGGCAGTGCTGGAGAGTGA
back to top