mRNA_11587 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|155307 vs. uniprot
Match: A0A835ZH59_9STRA (Alpha/Beta hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH59_9STRA) HSP 1 Score: 405 bits (1041), Expect = 1.630e-142 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1 Query: 1 RGGLIFLHGSGDTGPGVQEWLDYITGGSFERTLAGQGILCLYPTAPLRPYTMCQGELRHVWHDRLALDFNSIPDEEHVLESMEIVEGLLEELEEAGVDRSAVVLGGFSMGGGVALQCIAAPWACHLAGVFSLSSFLHAASPLYAQXXXXXXXXXXXXXLYTAHGLRDEMVSHAWARSTAQGLTSAGYAVTHAEYATLGHDMSRAEVEALLQWIGARV 651 RGGLIFLHGSGDTGPGVQEWLDYITGGSFERTLAGQGILCLYPTAPLRPYTMCQGELRHVWHDRLALDFNSIPDEEHVLESMEIVEGLLEELEEAGVDRSAVVLGGFSMGGGVALQCIAAPWACHLAGVFSLSSFLHAASPLYAQXXXXXXXXXXXXXLYTAHGLRDEMVSHAWARSTAQGLTSAGYAVTHAEYATLGHDMSRAEVEALLQWIGARV Sbjct: 1 RGGLIFLHGSGDTGPGVQEWLDYITGGSFERTLAGQGILCLYPTAPLRPYTMCQGELRHVWHDRLALDFNSIPDEEHVLESMEIVEGLLEELEEAGVDRSAVVLGGFSMGGGVALQCIAAPWACHLAGVFSLSSFLHAASPLYAQXXXXXXXXXXXXXLYTAHGLRDEMVSHAWARSTAQGLTSAGYAVTHAEYATLGHDMSRAEVEALLQWIGARV 217
BLAST of jgi.p|Trimin1|155307 vs. uniprot
Match: D8LB84_ECTSI (GI23857 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB84_ECTSI) HSP 1 Score: 149 bits (376), Expect = 1.650e-40 Identity = 96/223 (43.05%), Postives = 126/223 (56.50%), Query Frame = 1 Query: 1 RGGLIFLHGSGDTGPGVQEWLDYITGGSFERTLAGQGI-LCLYPTAPLRPYTMCQGELRHVWHDRLALDFNSIPDEEHVLESMEIVEGLLEELEEAGVDRSAVVLGGFSMGGGVALQCIAAPW-ACHLAGVFSLSSFLHAASPLY---AQXXXXXXXXXXXXXLYTAHGLRDEMVSHAWARSTAQGLTS-AGYAVTHAEYATLGHDMSRAEVEALLQWIGARV 651 RG +IFLHGSGDTG GV++WL +GG F+R +A G+ +YPTAP R YT+ G + VW DR L S D VL S+ VE + +LE+AGV RS V +GGFSMGG +AL+ + A A LAGVFS +SFL S ++ A +Y HG D MV AW RSTA+ L + G +T E+ L H++ ++ LL WI V Sbjct: 9 RGAVIFLHGSGDTGGGVRDWLSSASGGKFDRAIAELGLGEVVYPTAPERRYTLAGGAVSTVWFDRERLSPGSRQDRAGVLRSLRQVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLSDDSAVFEVTAGGSAAQSSRPAPTPVYVTHGAADGMVKVAWGRSTAEKLKARGGLDLTFKEHVELDHELEEEQIAGLLDWISTVV 231
BLAST of jgi.p|Trimin1|155307 vs. uniprot
Match: A0A803TKH0_ANOCA (Palmitoyl-protein hydrolase n=1 Tax=Anolis carolinensis TaxID=28377 RepID=A0A803TKH0_ANOCA) HSP 1 Score: 139 bits (350), Expect = 1.880e-37 Identity = 79/211 (37.44%), Postives = 128/211 (60.66%), Query Frame = 1 Query: 10 LIFLHGSGDTGPGVQEWLDYITGGSFERTLAGQGILCLYPTAPLRPYTMCQGELRHVWHDRLALDFNSIPDEEHVLESM-EIVEGLLEELEEAGVDRSAVVLGGFSMGGGVALQCIAAPWACHLAGVFSLSSFLHAASPLYAQXXXXXXXXXXXXXLYTAHGLRDEMVSHAWARSTAQGLTSAGYAVTHAEYATLGHDMSRAEVEALLQWI 639 +IFLHGSGD+GPGV++W+ + ++ L+ Q I +YPTAP RPYT +G L +VW DR + ++ P+ ++SM +++ L+++ + G+ ++ ++LGGFSMGGG+A+ +A + +AGVF+LSSFL+ S +Y L+ HG DE+V ++W T + LTS G T L H+M+++E+E L +WI Sbjct: 21 VIFLHGSGDSGPGVRDWIKQV----LKKNLSFQHIKVIYPTAPARPYTPMRGSLSNVWFDRYKISYDC-PEHIETIDSMCQVLTSLIDDEVKNGIKKNRILLGGFSMGGGMAMH-LAYRYHQDVAGVFALSSFLNKNSVVYQALKKEGQEVPE---LFQCHGTADELVLYSWGEETNKMLTSLGVTTTFLSLPNLYHEMNKSELEKLQEWI 222
BLAST of jgi.p|Trimin1|155307 vs. uniprot
Match: UPI001C4DB05C (LOW QUALITY PROTEIN: lysophospholipase-like protein 1 n=1 Tax=Sceloporus undulatus TaxID=8520 RepID=UPI001C4DB05C) HSP 1 Score: 137 bits (344), Expect = 1.610e-36 Identity = 79/211 (37.44%), Postives = 125/211 (59.24%), Query Frame = 1 Query: 10 LIFLHGSGDTGPGVQEWLDYITGGSFERTLAGQGILCLYPTAPLRPYTMCQGELRHVWHDRLALDFNSIPDEEHVLESM-EIVEGLLEELEEAGVDRSAVVLGGFSMGGGVALQCIAAPWACHLAGVFSLSSFLHAASPLYAQXXXXXXXXXXXXXLYTAHGLRDEMVSHAWARSTAQGLTSAGYAVTHAEYATLGHDMSRAEVEALLQWI 639 +IFLHGSGDTG G+++W+ + + L+ Q I +YPTAP RPYT +G L VW DR + N P+ ++SM + + GL+++ + G+ ++ ++LGGFSMGGG+A+ +A + +AGVF+LSSFL+ S +Y L+ HG DE+V ++W T + L S G A T E+ + H+++++E+E L WI Sbjct: 24 IIFLHGSGDTGQGIRDWIKQV----LNQDLSFQHIKVIYPTAPARPYTPMRGSLSSVWFDRYKIS-NDCPEHIETIDSMCQALTGLIDDEVKNGIKKNRILLGGFSMGGGMAMH-LAYRYHQDVAGVFALSSFLNKNSSVYQALKKDGRELPE---LFQCHGTADELVLYSWGEETNKMLKSLGVATTFFEFPNIYHELNKSELEKLQTWI 225
BLAST of jgi.p|Trimin1|155307 vs. uniprot
Match: A0A3B4C1E0_PYGNA (Palmitoyl-protein hydrolase n=1 Tax=Pygocentrus nattereri TaxID=42514 RepID=A0A3B4C1E0_PYGNA) HSP 1 Score: 136 bits (343), Expect = 2.590e-36 Identity = 85/211 (40.28%), Postives = 119/211 (56.40%), Query Frame = 1 Query: 10 LIFLHGSGDTGPGVQEWL-DYITGGSFERTLAGQGILCLYPTAPLRPYTMCQGELRHVWHDRLALDFNSIPDEEHVLESMEIVEGLLEELEEAGVDRSAVVLGGFSMGGGVALQCIAAPWACHLAGVFSLSSFLHAASPLYAQXXXXXXXXXXXXXLYTAHGLRDEMVSHAWARSTAQGLTSAGYAVTHAEYATLGHDMSRAEVEALLQWI 639 +IFLHGSGDTG G++ W+ D +T + +A + I +YPTAP RPYT +G L HVW DR + + E + E + ++++ +AGV + +V+GGFSMGG +AL +A + LAGVF+LSSFL+ S +Y L HG DE+VSH+W T+ L AG A T + LGH + RAE+E L WI Sbjct: 22 VIFLHGSGDTGQGLRAWVRDVLT-----QDMAFEHIRVIYPTAPARPYTPMKGGLSHVWFDRYKISCDCPEQLESIDEMCSNLGAIVQDEVQAGVPKQRIVIGGFSMGGAMALH-LACRYHQDLAGVFALSSFLNKDSFVYQAVEDAARHPLPE--LLQCHGTADELVSHSWGEETSSLLKKAGMATTFHSFPGLGHHLCRAELELLHSWI 224
BLAST of jgi.p|Trimin1|155307 vs. uniprot
Match: A0A674K021_TERCA (Palmitoyl-protein hydrolase n=11 Tax=Durocryptodira TaxID=1579337 RepID=A0A674K021_TERCA) HSP 1 Score: 135 bits (341), Expect = 4.890e-36 Identity = 79/214 (36.92%), Postives = 121/214 (56.54%), Query Frame = 1 Query: 1 RGGLIFLHGSGDTGPGVQEWLDYITGGSFERTLAGQGILCLYPTAPLRPYTMCQGELRHVWHDRLALDFNSIPDEEHVLESM-EIVEGLLEELEEAGVDRSAVVLGGFSMGGGVALQCIAAPWACHLAGVFSLSSFLHAASPLYAQXXXXXXXXXXXXXLYTAHGLRDEMVSHAWARSTAQGLTSAGYAVTHAEYATLGHDMSRAEVEALLQWI 639 R +I LHGSGDTGPGV+ W+ + + L Q I +YPTAP RPYT +G L VW DR + N P+ ++SM +++ ++++ + G+ ++ ++LGGFSMGGG+A+ +A + +AGVF+LSSFL+ S +Y L+ HG DE+V H+W T + L S G A + + L H++ + E+E L WI Sbjct: 19 RASVILLHGSGDTGPGVRAWIKQV----LNQDLVFQHIKVIYPTAPARPYTPMRGALSTVWFDRWKIS-NECPEHIETIDSMCQVLTNVIDDEVKNGISKNRIILGGFSMGGGMAMH-LAYRYHQDVAGVFALSSFLNKTSAVYQALQKNESVLPE---LFQCHGTADELVLHSWGEETNKMLKSLGVATSFHSFPNLKHELHKTELEKLSSWI 223
BLAST of jgi.p|Trimin1|155307 vs. uniprot
Match: A0A6I8P4D0_ORNAN (Palmitoyl-protein hydrolase n=3 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=A0A6I8P4D0_ORNAN) HSP 1 Score: 137 bits (345), Expect = 1.380e-35 Identity = 82/213 (38.50%), Postives = 120/213 (56.34%), Query Frame = 1 Query: 1 RGGLIFLHGSGDTGPGVQEWLDYITGGSFERTLAGQGILCLYPTAPLRPYTMCQGELRHVWHDRLALDFNSIPDEEHVLESMEIVEGLLEELEEAGVDRSAVVLGGFSMGGGVALQCIAAPWACHLAGVFSLSSFLHAASPLYAQXXXXXXXXXXXXXLYTAHGLRDEMVSHAWARSTAQGLTSAGYAVTHAEYATLGHDMSRAEVEALLQWI 639 R LI LHGSGD+G G+++W+ + R LA + + +YPTAPLRPYT GEL VW DR + +S E + +I+ L+++ ++G+ ++ +++GGFSMGG +ALQ +A LAGVF+LSSFL+ S +Y L+ HG DE+V H+W R T L S G T + L H+++R E+E L WI Sbjct: 120 RASLIVLHGSGDSGQGMKDWIRR----TLNRDLAFRHVKIIYPTAPLRPYTPRMGELSPVWFDRYKISIDSPEHLESINSMCQILTDLIDDEVKSGIKKNRILIGGFSMGGCMALQ-LAYRKHQDLAGVFALSSFLNKTSAVYQALQKKEASLPE---LFQCHGTADELVPHSWGRETNSRLRSLGVTTTFHSFPRLNHELNRDELEQLKSWI 324
BLAST of jgi.p|Trimin1|155307 vs. uniprot
Match: UPI0015923F26 (lysophospholipase-like protein 1 n=3 Tax=Lacertinae TaxID=162266 RepID=UPI0015923F26) HSP 1 Score: 134 bits (337), Expect = 1.700e-35 Identity = 76/211 (36.02%), Postives = 123/211 (58.29%), Query Frame = 1 Query: 10 LIFLHGSGDTGPGVQEWLDYITGGSFERTLAGQGILCLYPTAPLRPYTMCQGELRHVWHDRLALDFNSIPDEEHVLESM-EIVEGLLEELEEAGVDRSAVVLGGFSMGGGVALQCIAAPWACHLAGVFSLSSFLHAASPLYAQXXXXXXXXXXXXXLYTAHGLRDEMVSHAWARSTAQGLTSAGYAVTHAEYATLGHDMSRAEVEALLQWI 639 ++FLHGSGDTG G+++W+ ++ L+ Q I +YPTAP RPYT +G L +VWHDR + N P+ ++SM + + L+++ ++G+ ++ ++LGGFSMGGG+A+ +A + +AG F+LSSFL S +Y L+ HG DE+V ++W T + L S G A T L H+++++E++ L WI Sbjct: 22 VVFLHGSGDTGQGLRDWIKWV----LSHDLSFQHIKVIYPTAPARPYTPMRGSLSNVWHDRYKIS-NDCPEHIETIDSMCQALTSLIDDEVKSGIGKNRILLGGFSMGGGMAMH-LAYRYHQDVAGAFALSSFLSKTSAVYQALKKIEREPPE---LFQCHGTADELVLYSWGEETNKVLKSLGIATTFLSLPNLYHELNKSELDKLQAWI 223
BLAST of jgi.p|Trimin1|155307 vs. uniprot
Match: A0A8D0KJ62_9SAUR (Palmitoyl-protein hydrolase n=1 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0KJ62_9SAUR) HSP 1 Score: 134 bits (336), Expect = 2.330e-35 Identity = 78/211 (36.97%), Postives = 124/211 (58.77%), Query Frame = 1 Query: 10 LIFLHGSGDTGPGVQEWLDYITGGSFERTLAGQGILCLYPTAPLRPYTMCQGELRHVWHDRLALDFNSIPDEEHVLESM-EIVEGLLEELEEAGVDRSAVVLGGFSMGGGVALQCIAAPWACHLAGVFSLSSFLHAASPLYAQXXXXXXXXXXXXXLYTAHGLRDEMVSHAWARSTAQGLTSAGYAVTHAEYATLGHDMSRAEVEALLQWI 639 +IFLHGSGDTG G++ W+ + + L+ Q I +YPTAP RPYT +G L +VW DR + N P+ ++SM + + GL+++ + G+ ++ ++LGGFSMGGG+A+ +A + +AGVF+LSSFL+ S +Y L+ HG DE+V ++W T++ L S G T + L H+++++E+E L WI Sbjct: 21 VIFLHGSGDTGQGIRTWIKQV----LNQDLSFQHIRLIYPTAPARPYTPMRGSLSNVWFDRYKIS-NDCPEHTETIDSMCQALTGLIDDEVKNGIKKNRILLGGFSMGGGMAMH-LAYRFHQDVAGVFALSSFLNKNSGVYKALKKSEGEIPE---LFQCHGTADELVLYSWGDETSKMLKSLGVTTTFLSFPNLYHELNKSELEKLHTWI 222
BLAST of jgi.p|Trimin1|155307 vs. uniprot
Match: A0A6H5K9N1_9PHAE (Abhydrolase_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9N1_9PHAE) HSP 1 Score: 133 bits (335), Expect = 3.380e-35 Identity = 89/215 (41.40%), Postives = 117/215 (54.42%), Query Frame = 1 Query: 1 RGGLIFLHGSGDTGPGVQEWLDYITGGSFERTLAGQGI-LCLYPTAPLRPYTMCQGELRHVWHDRLALDFNSIPDEEHVLESMEIVEGLLEELEEAGVDRSAVVLGGFSMGGGVALQCIAAPW-ACHLAGVFSLSSFLHAASPLYAQXXXXXXXXXXXXX--LYTAHGLRDEMVSHAWARSTAQGLTS-AGYAVTHAEYATLGHDMSRAEVEALL 630 RG +IFLHGSGDTG GV++WL +GG F R +A G+ +YPTAP R YT+ G VW DR L S D VL S+ VE + +LE+AGV S V +GGFSMGG +AL+ + A A LAGVFS +SFL S ++ +Y HG D MV AW R+TA+ L + G +T E+ L H++ + L Sbjct: 9 RGAVIFLHGSGDTGRGVRDWLSSASGGKFNRAIAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRERLSPGSPQDRAGVLRSLRQVEDEVRKLEDAGVPSSGVFVGGFSMGGCLALETLGAEGLAGRLAGVFSHASFLSDDSAVFEMTAGSAAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKTGLDLTFKEHVELDHELGEEQARKFL 223 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|155307 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11587 ID=mRNA_11587|Name=jgi.p|Trimin1|155307|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=651bp|location=Sequence derived from alignment at Contig_107:281377..282369- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. AGAGGTGGACTGATCTTCCTACATGGCAGTGGCGACACGGGACCTGGAGTback to top protein sequence of jgi.p|Trimin1|155307 >Trimin1|155307|gw1.107.103.1 ID=Trimin1|155307|gw1.107.103.1|Name=jgi.p|Trimin1|155307|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=217bp RGGLIFLHGSGDTGPGVQEWLDYITGGSFERTLAGQGILCLYPTAPLRPYback to top mRNA from alignment at Contig_107:281377..282369- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11587 ID=mRNA_11587|Name=jgi.p|Trimin1|155307|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=993bp|location=Sequence derived from alignment at Contig_107:281377..282369- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_107:281377..282369- >mRNA_11587 ID=mRNA_11587|Name=jgi.p|Trimin1|155307|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=651bp|location=Sequence derived from alignment at Contig_107:281377..282369- (Tribonema minus UTEX_B_3156 )back to top |