mRNA_11514 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|180821 vs. uniprot
Match: A0A836CER7_9STRA (FirrV-1-A48 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CER7_9STRA) HSP 1 Score: 641 bits (1654), Expect = 5.530e-232 Identity = 307/335 (91.64%), Postives = 320/335 (95.52%), Query Frame = 1 Query: 1 MADEEFTLFLCAAIIVVIAYRVSSRASIIPHTAALPSYLKYKERWLMPVRDQGPCAACWSYSVVDMMADTLNVWTAGAYGKRPLSAQYLLSCSKAHEGCDVGGSPEAVYNLPQMTDVGCPLAADLPYEGKVTECKQFPPNAFRVRTLKNTAVDLCDDPSLALPGTRGATIKRNVENMKRALMAYGPIVGTIRVTEDLYAYKADGIYRGDPASKLVGYHAIEIIGWCDEQINIREPGFDTPSYWTCRSSWGMTWGVPKGVQSGYFFIEMGANVCDVESRASVCRVEFSKELAAIAKKTPVSDVRYESYADYADDPERQNFIDAVHAKLGDTAAFVR 1005 MADEEFTLFLCAAIIVVIAYRVSSRASIIP TAALPSYLKYKERWLMPVRDQGPCAACWSYSVVDMMADTLNVWTAG YGKRPLSAQYLLSCSKAHEGCDVGGSPEAVYNLPQMTDVGCPL ADLPYEGKVTECKQ PP+AFRVRT+KNTAVDLCDDPSLALPGTRGATIKRNVENMKRALMAYGPIVGTIRVTEDLYAYKADGIYRGDP SKLVGYHAIEIIGWC E +NIREPGFD+P++W CRSSWG+ WGVP GV SG+ FIEMGANVCD+ESRASVCRV F KELAAIAKKTP+++VRYESY DYADDPERQNFIDAVHAKLGDTA+FVR Sbjct: 1 MADEEFTLFLCAAIIVVIAYRVSSRASIIPLTAALPSYLKYKERWLMPVRDQGPCAACWSYSVVDMMADTLNVWTAGGYGKRPLSAQYLLSCSKAHEGCDVGGSPEAVYNLPQMTDVGCPLDADLPYEGKVTECKQLPPDAFRVRTIKNTAVDLCDDPSLALPGTRGATIKRNVENMKRALMAYGPIVGTIRVTEDLYAYKADGIYRGDPTSKLVGYHAIEIIGWCCEAVNIREPGFDSPAFWICRSSWGVYWGVPPGVSSGFAFIEMGANVCDIESRASVCRVNFPKELAAIAKKTPLTEVRYESYTDYADDPERQNFIDAVHAKLGDTASFVR 335
BLAST of jgi.p|Trimin1|180821 vs. uniprot
Match: A0A835YX55_9STRA (Putative cysteine protease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX55_9STRA) HSP 1 Score: 449 bits (1156), Expect = 5.170e-156 Identity = 217/330 (65.76%), Postives = 255/330 (77.27%), Query Frame = 1 Query: 22 LFLCAAIIVVIAYRVSSRASIIPHTAA-LPSYLKYKERWLMPVRDQGPCAACWSYSVVDMMADTLNVWTAGAYGKRPLSAQYLLSCSKAHEGCDVGGSPEAVYNLPQMTDVGCPLAADLPYEGKVTECKQFPPNAFRVRTLKNTAVDLCDDPSLALPGTRGATIKRNVENMKRALMAYGPIVGTIRVTEDLYAYKADGIYRGDPASKLVGYHAIEIIGWCDEQINIREPGFDTPSYWTCRSSWGMTWGVPKGVQSGYFFIEMGANVCDVESRASVCRVEFSKELAAIAKKTPVSDVRYESYADYADDPERQNFIDAVHAKLG-DTAAFVR 1005 L L A+++ AYR +S A+ + A LPSYLKYKE++LMPVRDQ CAACWS+SV DMMADTLN TAGA+GKRPLSAQYLLSCS AH GC+VGGSPE VY+LPQ+TD GCPL ADLPYEGK T C+ PP+ RVRT+ NTAV LCDDP ALPGTR ATI+RNV NMKRAL+ YGPIVGT+RVT DLYAY+ DGI+RGDPASK GYHA+EI+GWCDE +N EPGFD +YW RSSWG WGVPKG++ G+ ++ MG N D+ESRASVCRVEF L + ++TP S RYESY Y DDPER+NFI + LG ++ AF R Sbjct: 15 LALTCAVLLAFAYRSASFATPVADDGAPLPSYLKYKEKFLMPVRDQRCCAACWSFSVADMMADTLNAQTAGAFGKRPLSAQYLLSCSSAHRGCEVGGSPEDVYDLPQLTDAGCPLDADLPYEGKETPCRPLPPDVLRVRTVPNTAVSLCDDPDRALPGTRAATIRRNVRNMKRALLQYGPIVGTLRVTGDLYAYRGDGIFRGDPASKFYGYHAVEIVGWCDENVNWAEPGFDG-AYWIVRSSWGFDWGVPKGMRYGWAYVTMGENCADIESRASVCRVEFPMALEEVRRRTPTSAARYESYEHYVDDPERENFIGGLKTALGANSKAFRR 343
BLAST of jgi.p|Trimin1|180821 vs. uniprot
Match: A0A835Z8B2_9STRA (Putative cysteine protease n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8B2_9STRA) HSP 1 Score: 303 bits (777), Expect = 1.240e-98 Identity = 143/290 (49.31%), Postives = 192/290 (66.21%), Query Frame = 1 Query: 103 LPSYLKYKERWLMPVRDQGPCAACWSYSVVDMMADTLNVWTAGAYGKRPLSAQYLLSCSKAHEGCDVGGSPEAVYNLPQMTDVGCPLAADLPYEGKVTE-CKQFPPNAFRVRTLKNTAVDLCDDPSLALPGTRGATIKRNVENMKRALMAYGPIVGTIRVTEDLYAYKADGIYRGDPASKLVGYHAIEIIGWCDEQINIREPGFDTPSYWTCRSSWGMTWGVPKGVQSGYFFIEMGANVCDVESRASVCRVEFSKELAAIAKKTPVSDVRYESYADYADDPERQNFIDAV 969 LP+Y K+KER+L+PVR+Q CAACW+ SV DMM+DT+N+ + G +G+ LS QYL+SC HEGC+ GGSPE Y+LPQ+TD G PL + PY T CK RVRT+KNT DLC DP+ R I N+ MK+AL+ GPIVGT+RV EDLY Y IY+ P S+ +GYHA+E++GW +E++N EPGFD +YW RSSWG WG +G++ G+ +++MG N D+ESRASVC VE + + T + +RY SY Y +DPER +F+ A+ Sbjct: 42 LPTYFKWKERFLVPVRNQKGCAACWALSVCDMMSDTINLRSGGQWGRNHLSPQYLISCWSGHEGCNTGGSPEGTYDLPQLTDAGIPLEEEFPYVATDTAPCKAITEGVLRVRTVKNTGRDLCIDPATVPENVRQQVIDANIVRMKKALLN-GPIVGTLRVHEDLYKYDGLAIYQVTPGSRQIGYHAVEVVGWANEEVNFAEPGFDD-AYWVVRSSWGDNWGA-RGIRYGFAYVKMGCNEADIESRASVCEVEMPESVKDAIAATDIDTMRYTSYTQYVEDPERSHFVGAM 328
BLAST of jgi.p|Trimin1|180821 vs. uniprot
Match: A0A836CC90_9STRA (Pept_C1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC90_9STRA) HSP 1 Score: 304 bits (779), Expect = 1.380e-98 Identity = 168/335 (50.15%), Postives = 208/335 (62.09%), Query Frame = 1 Query: 13 EFTLFLCAAIIVVIAYRVSSRASIIPH------TAALPSYLKYKERWLMPVRDQGPCAACWSYSVVDMMADTLNVWTAGAYGKRPLSAQYLLSCSKA-HEGCDVGGSPEAVYNLPQMTDVG--CPLAADLPY---EGKVTECKQFP-PNAFRVRTLKNTAVDLCDDPSLALPGTRGATIKRNVENMKRALMAYGPIVGTIRVTEDLYAYKADGIYRGDPASKLVGYHAIEIIGWCDEQINIREPGFDTPSYWTCRSSWGMTWGVPKGVQSGYFFIEMGANVCDVESRASVCRVEFSKELAAIA---KKTPVSDVRYESYADYADDPERQNFIDAV 969 E L AA+++ A+ RA IP + LPSY KY E L P RDQ CA+CW+++V DM AD LN+ T GA+G RPLS QYLLSC+ + C+ GG PE P T G PL +++PY EG P P RVR +++ LCDDPSLALPG RGAT+KRNV NMKRA+M +GP+VGT+RVTEDLY Y A IYR DPAS VGYHA+ I+GWCD ++N EPGFD +YW +SSWG WGVP+GV+SGY ++ MG N+ +VESRASV A K+T Y SY DYA DP+R NF+ AV Sbjct: 15 EAALPAAAALVLAYAWAGRQRAPRIPRLFGASASEPLPSYFKYHEALLNPPRDQLGCASCWAFAVCDMAADALNLRTEGAWGVRPLSPQYLLSCAPGLTQSCEEGGIPEEALESPAATSEGGGIPLESEVPYRADEGPCAASSARPSPGGVRVRIAPGSSLSLCDDPSLALPGMRGATVKRNVANMKRAIMRHGPVVGTLRVTEDLYDYAASEIYRQDPASAFVGYHAVLIVGWCDARVNSAEPGFDG-AYWVIKSSWGQHWGVPEGVRSGYAYVAMGENIAEVESRASVATAVLPDGFAEAEGWQKRTA-----YWSYDDYARDPDRDNFLGAV 343
BLAST of jgi.p|Trimin1|180821 vs. uniprot
Match: A0A836CH74_9STRA (FirrV-1-A48 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH74_9STRA) HSP 1 Score: 295 bits (754), Expect = 1.880e-95 Identity = 141/293 (48.12%), Postives = 193/293 (65.87%), Query Frame = 1 Query: 94 TAALPSYLKYKERWLMPVRDQGPCAACWSYSVVDMMADTLNVWTAGAYGKRPLSAQYLLSCSKAHEGCDVGGSPEAVYNLPQMTDVGCPLAADLPYEGKVT-ECKQFPPNAFRVRTLKNTAVDLCDDPSLALPGTRGATIKRNVENMKRALMAYGPIVGTIRVTEDLYAYKADGIYRGDPASKLVGYHAIEIIGWCDEQINIREPGFDTPSYWTCRSSWGMTWGVPKGVQSGYFFIEMGANVCDVESRASVCRVEFSKELAAIAKKTPVSDVRYESYADYADDPERQNFIDAV 969 + LPSY K++E+WLMPVR+Q CA+CWS SV DM+AD+LN+ T GAYG PLS+QYLLSC + H GCD+G SPE VY+LPQ+T+ G PL + PY+ T C +F RV+T+K+TA D+C +P+ + ++ I RN+ NMKRAL PIVGT+RV D+Y Y IY P S L+GYHA+ I+G+ D N EPGF + YW +SSWG +WG G + G+ +++MG N D+ESRAS C V EL T ++ + Y SY++Y +DP+R NF+ +V Sbjct: 20 SVGLPSYFKWREKWLMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSCYRGHLGCDIGDSPENVYDLPQLTEQGIPLESAFPYQASDTLACPKFADGIQRVKTVKSTAEDICLEPNTVVFTSKQDVINRNIVNMKRALQR-SPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGF-SEGYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRASRCDVVVPDELKDAVAATDMTQMAYSSYSEYVNDPDRFNFLGSV 310
BLAST of jgi.p|Trimin1|180821 vs. uniprot
Match: B5LWL5_9PHYC (Putative cysteine protease n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWL5_9PHYC) HSP 1 Score: 207 bits (526), Expect = 1.490e-60 Identity = 123/299 (41.14%), Postives = 164/299 (54.85%), Query Frame = 1 Query: 100 ALPSYLKYKERWLMPVRDQGPCAACWSYSVVDMMADTLNVWTAGAYGKRPLSAQYLLSCSKAHEG--CDVGGSPEAVYNLPQMTDVGCPLAADLPYEGK----VTECKQFPPNAFRVRTLKNTAVDLCDDPSL--ALPGTRGATIKRNVENMKRALMAYGPIVGTIRVTEDLYAYKADGIYRGDPASKLVGYHAIEIIGWCDEQINIREPGFDTPS-YWTCRSSWGMTWGVPKGVQSGYFFIEMGANVCDVESRASVCRVEFSKELAAIAKKTPVSDVRYESYADYADDPERQNFIDAV 969 ALPSYLKYKER L PV DQG CA+CWS SVV M+AD ++V+T G KR LS Q ++SC H+G C GG PE Y + + G + D PYE + C R+ ++ LC DP G R I N+ NMK+ L+ GP V TI V ++LY Y +Y+G S+ VG H++ +G+CDE IN EPGFD P YW R+SW W + GYF+I+ G+NVC +ESRAS V + E+ +++ RY SY Y +DP+RQ + V Sbjct: 59 ALPSYLKYKERLLTPVVDQGKCASCWSISVVQMLADRVSVYTGGKVRKR-LSVQEMISCWDGHDGLACSKGGVPEEAYQY--IVENGIGMDEDYPYEQSNSDDIRPCVPSRLKGPRLYVQGSSVRSLCIDPYEYEQSSGERRGVIDMNICNMKKELLMNGPFVCTIMVYQNLYDYDGLSVYQGHDDSEFVGGHSVVCVGYCDEGINGVEPGFDVPGGYWVIRNSWS-DWPLKSPASEGYFYIQKGSNVCGIESRASRALVVPTDEILNNTVAN-LNESRYVSYTSYVNDPDRQLLVSRV 352
BLAST of jgi.p|Trimin1|180821 vs. uniprot
Match: D3BV74_POLPP (Pept_C1 domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BV74_POLPP) HSP 1 Score: 111 bits (278), Expect = 9.940e-25 Identity = 78/261 (29.89%), Postives = 132/261 (50.57%), Query Frame = 1 Query: 100 ALPSYLKYKERW---LMPVRDQGPCAACWSYSVVDMMADTLNVWTAGAYGKRPLSAQYLLSCS-KAHEGCDVGGSPEAVYNLPQMTDVGCPLAADLPY---EGKVTECKQFPPNAFRVRTLKNTAVDLCDDPSLALPGTRGATIKRNVENMKRALMAYGPIVGTIRVTEDLYAYKADGIYRGDPASKLVGYHAIEIIGWCDEQINIREPGFDTPSYWTCRSSWGMTWGVPKGVQSGYFFIEMGANVCDVESRASVCRVEFS 861 A+P+ + W + V +QG C +CW+++ + ++D L + + GA LS Q L+SC + ++GC+ GG P+ + ++ G P + PY G +C++ + + + K L S+A I+ NV AYGPI GT+ V +D +Y + G+Y P SKL+G HAI+I+GW + + G D YW ++SWG WG+ +G+F+I+ G N+C ++ AS + + S Sbjct: 80 AVPNSFDSRTNWPGCVHAVLNQGQCGSCWAFAASESLSDRLCIASQGAINVT-LSPQALVSCDIEFNQGCN-GGIPQMAWEYLELH--GIPTDSCFPYTSGNGTAPDCQKECSDGSKYQLYKGKTFTLKTCSSVA-------AIQANV-------FAYGPIEGTMDVYQDFMSYTS-GVYVMTPGSKLLGGHAIKIVGWGTDSTS----GLD---YWIVQNSWGSDWGM-----NGFFWIQRGTNMCGIDRDASAGQADIS 309
BLAST of jgi.p|Trimin1|180821 vs. uniprot
Match: A0A7C5RYU9_9DELT (Pept_C1 domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C5RYU9_9DELT) HSP 1 Score: 98.2 bits (243), Expect = 5.110e-19 Identity = 71/244 (29.10%), Postives = 111/244 (45.49%), Query Frame = 1 Query: 97 AALPSYLKYKER----WLMPVRDQGPCAACWSYSVVDMMADTLNVWTAGAYGKRPLSAQYLLSCSKAHEGCDVGGSPEAVYNLPQ---MTDVGCPLAADLPYEGKVTECKQFPPNAFRVRTLKNTAVDLCDDPSLALPGTRGATIKRNVENMKRALMAYGPIVGTIRVTEDLYAYKADGIYRGDPASKLVGYHAIEIIGWCDEQINIREPGFDTPSYWTCRSSWGMTWGVPKGVQSGYFFIEMG 807 A PS + Y+ W+ P+RDQ C +CW++S + + + ++ + LS Q L+SC+ A C GGS N + +TD C PY + +CK N LK+ GT G E++K AL+ YGPI +++V D Y+YK G+Y+ + G+HAI +GW D + + W C++SWG +G + GYF+I+ G Sbjct: 77 AQYPSKIDYRNYLGYDWMTPIRDQKSCGSCWAFSTLGSLEAIIKLYNSDPNMDIDLSEQELISCT-ATGSCAYGGSQLFAANYIKASGITDESC-----FPYIAQEGDCKNRCQNPKIREYLKDA-------------GTIGFFSIAGEEDIKSALIKYGPIPTSMKVYSDFYSYKG-GVYQKTSNATEEGWHAIVFVGWDDSK-----------NAWLCKNSWGDDFG-----EKGYFWIKKG 284
BLAST of jgi.p|Trimin1|180821 vs. uniprot
Match: UPI00096B2D9F (LOW QUALITY PROTEIN: cathepsin B-like n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096B2D9F) HSP 1 Score: 89.7 bits (221), Expect = 9.820e-17 Identity = 71/243 (29.22%), Postives = 107/243 (44.03%), Query Frame = 1 Query: 124 KERWLMPVRDQGPCAACWSYSVVDMMADTLNVWTAGAYGKRPLSAQYLLSCSKAHEGCDVGGSPEAVYNLPQMTDVGCPLAADLPYEGKVTECKQFPPNAFRV------RTLKNTAVDLCDDPSLALPGTRGATIKRNVENMKRALMAYGPIVGTIRVTEDLYAYKADGIYRGDPASKLVGYHAIEIIGWCDEQINIREPGFDTPSYWTCRSSWGMTWGVPKGVQSGYFFIEMGANVCDVESR 834 K + + +RDQG C +CW+++V ++M+D + + P + + CS GC+ G +A G P D EG C+ + + V R + + +D G + N E+MK L+ GPIV V ED + YK G+Y A KLVG HA++IIG+ E + YW +SWG WG G+F I+ G N C++ESR Sbjct: 93 KCKTIKQIRDQGRCGSCWAFAVAEVMSDRHCISKNEQFIYSP--EELVSCCSNCGFGCNGGYIIQA---FKYWVSNGIPSGGD---EGSNHGCRPYTAGSTGVTPKCIQRCVPGYSPSWTNDLKY---GVEAYYVNANEEDMKNELVKKGPIVVGFDVYEDFFQYKR-GVYT-HTAGKLVGRHAVKIIGYGTE---------NGVKYWLIANSWGERWG-----DGGFFKIKRGTNECNIESR 308
BLAST of jgi.p|Trimin1|180821 vs. uniprot
Match: UPI001C4CDBA0 (pro-cathepsin H isoform X1 n=2 Tax=Sceloporus undulatus TaxID=8520 RepID=UPI001C4CDBA0) HSP 1 Score: 89.0 bits (219), Expect = 2.350e-16 Identity = 71/265 (26.79%), Postives = 118/265 (44.53%), Query Frame = 1 Query: 67 SSRASIIPHTAALPSYLKYKER--WLMPVRDQGPCAACWSYSVVDMMADTLNVWTAGAYGKRPLSAQYLLSCSKA--HEGCDVGGSPEAVYNLPQMTDVGCPLAADLPYEGKVTECKQFPPNAFR-VRTLKNTAVDLCDDPSLALPGTRGATIKRNVENMKRALMAYGPIVGTIRVTEDLYAYKADGIYRGDPASKLVGY--HAIEIIGWCDEQINIREPGFDTPSYWTCRSSWGMTWGVPKGVQSGYFFIEMGANVCDVESRAS 840 ++R + + T PS + ++++ ++ PV++QGPC +CW++S + + + T LS Q L+ C++A + GC GG P + + + G PY G CK P A V+ + N + L D+ S M A+ + P+ +VTED YK +G+Y K HA+ +G+ +E+ + YW ++SWG WG+ +GYF IE G N C + AS Sbjct: 104 ATRGNFVRRTGPYPSAIDWRKKGNYVTPVKNQGPCGSCWTFSTTGCLESAVAIATGKLL---ELSEQQLVDCAQAFNNHGCS-GGLPSQAFEY-ILYNGGLMEEDAYPYRGMNGTCKFQPGKAVAFVKDVVN--ITLYDEQS-----------------MVEAVGKHNPVSFAFQVTEDFMHYK-EGVYSNSRCDKTPDKVNHAVLAVGYGEEEKGL--------PYWIVKNSWGAFWGM-----NGYFLIERGKNTCGLADCAS 330 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|180821 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11514 ID=mRNA_11514|Name=jgi.p|Trimin1|180821|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1008bp|location=Sequence derived from alignment at Contig_228:96439..97446- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCGGACGAAGAGTTCACACTCTTTCTGTGCGCTGCAATCATAGTGGTback to top protein sequence of jgi.p|Trimin1|180821 >Trimin1|180821|e_gw1.228.24.1 ID=Trimin1|180821|e_gw1.228.24.1|Name=jgi.p|Trimin1|180821|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=336bp MADEEFTLFLCAAIIVVIAYRVSSRASIIPHTAALPSYLKYKERWLMPVRback to top mRNA from alignment at Contig_228:96439..97446- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11514 ID=mRNA_11514|Name=jgi.p|Trimin1|180821|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1008bp|location=Sequence derived from alignment at Contig_228:96439..97446- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_228:96439..97446- >mRNA_11514 ID=mRNA_11514|Name=jgi.p|Trimin1|180821|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1008bp|location=Sequence derived from alignment at Contig_228:96439..97446- (Tribonema minus UTEX_B_3156 )back to top |