mRNA_11466 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|338307
Unique NamemRNA_11466
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|338307 vs. uniprot
Match: A0A836C7H9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7H9_9STRA)

HSP 1 Score: 551 bits (1419), Expect = 1.920e-196
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 1
Query:    1 MSDPEHSTSVEKTTADRLADVLIQLKPVFTHLEALTERAQPLLTNAELQARSAWAGLQPYHPEALGPILLGLALVFAGGAFPTLVTAVEAVRVSGTWPGVVDACGALRANYKAARAAQEKDDQVDADRDGIADVAQADARALLRRRGALLLKSVNADQXXXXXXXXXXXXXXXXXXXXXXXARALAIGTALGRLTHDWCGAVVTEAAARALPPDARRAAPALVACAFRAAGVLAAAALARPVFAAFVAQRGAALAVGAAADLALRARCVAPGHWADAQRVRLAAALGAAGFAVQWWRAFQLAFALRVALLPLSAVEWALTLCFAVLV 981
            MSDPEHSTSVEKTTADRLADVLIQLKPVFTHLEALTERAQPLLTNAELQARSAWAGLQPYHPEALGPILLGLALVFAGGAFPTLVTAVEAVRVSGTWPGVVDACGALRANYKAARAAQEKDDQVDADRDGIADVAQADARALLRRRGALLLKSVNADQXXXXXXXXXXXXXXXXXXXXXXXARALAIGTALGRLTHDWCGAVVTEAAARALPPDARRAAPALVACAFRAAGVLAAAALARPVFAAFVAQRGAALAVGAAADLALRARCVAPGHWADAQRVRLAAALGAAGFAVQWWRAFQLAFALRVALLPLSAVEWALTLCFAVLV
Sbjct:    1 MSDPEHSTSVEKTTADRLADVLIQLKPVFTHLEALTERAQPLLTNAELQARSAWAGLQPYHPEALGPILLGLALVFAGGAFPTLVTAVEAVRVSGTWPGVVDACGALRANYKAARAAQEKDDQVDADRDGIADVAQADARALLRRRGALLLKSVNADQXXXXXXXXXXXXXXXXXXXXXXXARALAIGTALGRLTHDWCGAVVTEAAARALPPDARRAAPALVACAFRAAGVLAAAALARPVFAAFVAQRGAALAVGAAADLALRARCVAPGHWADAQRVRLAAALGAAGFAVQWWRAFQLAFALRVALLPLSAVEWALTLCFAVLV 327          
BLAST of jgi.p|Trimin1|338307 vs. uniprot
Match: A0A7S0T5G8_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T5G8_9RHOD)

HSP 1 Score: 107 bits (268), Expect = 3.230e-23
Identity = 91/273 (33.33%), Postives = 133/273 (48.72%), Query Frame = 1
Query:  154 SAWAGLQPYHPEALGPILLGLALVFAGGAFPTLVTAVEAVRVSGTWPGVVDACGALRANYKAARAAQEKDDQVDADRDGIADVAQADARALLRRRGALLLKSVNADQXXXXXXXXXXXXXXXXXXXXXXXARALAIGTALGRLTHDWCGAVVTEAAARALPPDARRAAPALVACAFRAAGVLAAAALARPVFAAFVAQRGAALAVGAAADLALRARCVAPGHWADAQRVRLAAALGAAGFAV-----QWW---RAFQLAFALRVALLPLSAVE 948
            + W  L+PYHP+ L P+++G+ LVF GG F  L+ A+EA R+ G +  V  +  AL   + AAR A E+DD VDAD+DG+ADV Q D + L  R+  ++L++V+  +                       A+A+ +GT++G   H +    V +     +P +  R  P ++   FR  GV  A  L R V A F+  +GA L       + L    V  G    A      + + +AGFAV      WW   R F L F L + LLPLS  E
Sbjct:   48 AVWEWLEPYHPDELIPVVVGILLVFFGGTFAVLIQAIEAARLFG-FEKVFTSLKALAQEFSAARKAYERDDMVDADKDGVADVKQMDKKQLAARKLGVILRAVDPQKLATALEGLTQAWIAIIATLRIKFAQAITLGTSIGNTLHRYVTPFVLKFTKPLVPREYARWLPVILQYTFRYIGVSIAFWLVRIVSALFMGMKGAEL-----FTIGLVQYFVRHGQL-SADVFDTGSPILSAGFAVIALFGAWWQISRNFSLPFPLNILLLPLSIAE 313          
BLAST of jgi.p|Trimin1|338307 vs. uniprot
Match: A0A7S0R125_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0R125_9CHLO)

HSP 1 Score: 105 bits (261), Expect = 3.020e-22
Identity = 90/296 (30.41%), Postives = 136/296 (45.95%), Query Frame = 1
Query:   76 KPVFTHLEALTERAQPLLTNAELQARSAWAGLQPYHPEALGPILLGLALVFAGGAFPTLVTAVEAVRVSGTWPGVVDACGALRANYKAARAAQEKDDQVDADRDGIADVAQADARALLRRRGALLLKSVNADQXXXXXXXXXXXXXXXXXXXXXXXARALAIGTALGRLTHDWCGAVVTEAAARALPPDARRAAPALVACAFRAAGVLAAAALARPVFAAFVAQRGAALAVGAAADLALRARCVAPGHWADAQRVR--LAAALGAAGFAVQWWRAFQLAFALRVALLPLSAVEWAL 957
            KP+   +  + + A P L  +   A   WA LQPY P+   P+++GL L+F GG +P LV A+EA R+ G W     +   L   YK A  A  KDD+VD ++DGIADV Q D + L+ R+ A+ +K+ + +                        A+ + +G +LG +      +VV  A  +ALP +  +    ++    R+  V  A  L R + A   A RGA L +     L L+ +  +P            +  ALG  G   Q  R F L F L   L P++ +EW L
Sbjct:   29 KPIVEAILKVLDVAGPALEKSIAIASKIWAQLQPYDPQDWLPVIMGLFLIFFGGQWPLLVGAIEAFRICG-WDNTKKSLVLLYDQYKIAMDASRKDDKVDENKDGIADVKQIDTKQLVSRKLAVFMKATDPNAVNTGMQGLAAGFGAVIATLKMRFAQTVTLGVSLGDIFAKTADSVVRPALEKALPKEYHKWVGVMITYGSRSLAVTIAWWLQRIISALHSAMRGAQLLLMGVNKLMLKYKVRSPVDLTPQNPAYPGVTGALGGIGMYTQLVRGFALPFPLSFLLFPVTLLEWVL 323          
BLAST of jgi.p|Trimin1|338307 vs. uniprot
Match: C1MW76_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MW76_MICPC)

HSP 1 Score: 97.4 bits (241), Expect = 2.390e-19
Identity = 93/307 (30.29%), Postives = 136/307 (44.30%), Query Frame = 1
Query:   43 ADRLADVLIQLKPVFTHLEALTERAQPLLTNAELQARSAWAGLQPYHPEALGPILLGLALVFAGGAFPTLVTAVEAVRVSGTWPGVVDACGALRANYKAARAAQEKDDQVDADRDGIADVAQADARALLRRRGALLLKSVNADQXXXXXXXXXXXXXXXXXXXXXXXARALAIGTALGRLTHDWCGAVVTEAAARALPPDARRAAPALVACAFRAAGVLAAAALARPVFAAFVAQRGAALAVGAAADLALRARCVAPGHWADAQRVRLAA--ALGAAGFAVQWWRAFQLAFALRVALLPLSAVEWAL 957
            A  +  +L +  P+F  L       +P +             L+PYHPE   P + G  LVF GG F TL  AVEA R+ G +     A   L+ +Y  A AA +KDD+VDAD DG+ADV Q DARAL  R+ A++ K+V+ D                        A  + IG+ +G + H+        A     P + ++  P  +    +  G + A  L   + A   A RGA +    +   A R   + P    +  RV  A   AL   GF  Q+W  + L F L + LLP++  E+A+
Sbjct:   37 ATLMRPMLEKTTPLFALLSQTIATIEPYVIALVAYFNHLATILKPYHPEEFLPAMCGFVLVFFGGNFFTLCAAVEAYRLIG-FDDTKIALKKLKHSYDVAMAASKKDDEVDADGDGVADVKQIDARALAVRKAAVVAKAVDPDLVTDALVAINGGLMAVVATLRVRFAACVTIGSTVGEMAHNAVQTHAEPALLELTPSEYKKWVPCGLRYGCQLCGFVIAWFLQMSISAFHSATRGAQMFARGSLTYATRRGYLNPTAIDEKGRVFNACVFALAFVGFWSQFWSGYSLPFPLNILLLPVTFAEYAM 342          
BLAST of jgi.p|Trimin1|338307 vs. uniprot
Match: A0A7S0I9E2_MICPS (Hypothetical protein n=3 Tax=Micromonas TaxID=38832 RepID=A0A7S0I9E2_MICPS)

HSP 1 Score: 96.3 bits (238), Expect = 9.280e-19
Identity = 90/305 (29.51%), Postives = 134/305 (43.93%), Query Frame = 1
Query:   43 ADRLADVLIQLKPVFTHLEALTERAQPLLTNAELQARSAWAGLQPYHPEALGPILLGLALVFAGGAFPTLVTAVEAVRVSGTWPGVVDACGALRANYKAARAAQEKDDQVDADRDGIADVAQADARALLRRRGALLLKSVNADQXXXXXXXXXXXXXXXXXXXXXXXARALAIGTALGRLTHDWCGAVVTEAAARALPPDARRAAPALVACAFRAAGVLAAAALARPVFAAFVAQRGAALAVGAAADLALRARCVAPGHWADAQRVR--LAAALGAAGFAVQWWRAFQLAFALRVALLPLSAVEW 951
            A  +  VL +  P F  L  +     P +  A      AW  LQPYHP+   P + G  LVF GG F TL  AVEA R+ G +     A  AL  +YK A  A +KDD VD D DGIADV Q  ++ L++R+  ++ K+++ +                        A+ + IG  +G + H+              P + ++     V  A +  GV  A  L   + A   A RGA L    +   A+R + ++P    +  +V       LG  GF  Q+W  F L F + + LLP++  E+
Sbjct:   74 AGAIKPVLDKAAPAFAVLSQVFAIVFPYIEMAFTYLAVAWEKLQPYHPQEFMPAIAGFCLVFFGGNFFTLAAAVEAYRMVG-FDETKTALIALHKSYKVALDASKKDDDVDDDGDGIADVKQISSKELVQRKIGVVAKAIDPELVADAVTAINAGLMAVVATLKVKFAKCVTIGVTVGGIAHNVVSTNFEPVLLELTPGEYKKWVSPGVKYACKLFGVSIAWWLQMTISAFHSASRGAQLFARGSLAYAVRHKYLSPSAIDEKGKVFNFFIVGLGCLGFWWQFWNGFSLPFPMNILLLPVTFAEY 377          
BLAST of jgi.p|Trimin1|338307 vs. uniprot
Match: R7QPM1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPM1_CHOCR)

HSP 1 Score: 87.0 bits (214), Expect = 4.950e-17
Identity = 53/132 (40.15%), Postives = 71/132 (53.79%), Query Frame = 1
Query:    7 DPEHSTSVEKTTADRLADVLIQLKPVFTHLEALTERAQPLLTNAELQARSAWAGLQPYHPEALGPILLGLALVFAGGAFPTLVTAVEAVRVSGTWPGVVDACGALRANYKAARAAQEKDDQVDADRDGIADV 402
            DP    S  +  A  LA V   + P+F  L  +    +P+L       ++ W  L+PYHPE L   L G  LVF GG + TLV + EA  + G W  +  A  AL   +  ARAA E+D++VDA+RDGIADV
Sbjct:   29 DPPQPASQTQDRAFNLAQVHDTVSPLFVALATIVGAVEPILDRVSDLVQTVWKALEPYHPEDLFVALYGFLLVFFGGVYMTLVASFEAAHIFG-WANIKMAVRALYYEWGKARAAFERDNKVDANRDGIADV 159          
BLAST of jgi.p|Trimin1|338307 vs. uniprot
Match: A0A7S3JX97_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JX97_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 6.750e-16
Identity = 58/204 (28.43%), Postives = 95/204 (46.57%), Query Frame = 1
Query:   40 TADRLADVLIQLKPVFTHLEALTERAQPLLTNAELQARSAWAGLQPYHPEALGPILLGLALVFAGGAFPTLVTAVEAVRVSGTWPGVVDACGALRANYKAARAAQEKDDQVDADRDGIADVAQADARALLRRRGALLLKSVNADQXXXXXXXXXXXXXXXXXXXXXXXARALAIGTALGRLTHDWCGAVVTEAAARALPPDARR 651
            T + +   +++L P+   +  + E + P +          +  L+PYHPE +  + LGL + F GG FP L+TAVEA R  G +   + A   L  +    + A +KDD++DAD+DGI DV Q +A  L+ R+  L LK+ +                          ARA+ +G A+G +        ++    + +PPD  R
Sbjct:   19 TPESVRAYIVKLAPIIALVGTILEVSVPYMIKIYNGLIKLYKILEPYHPEDMAYVFLGLCMAFFGGIFPALITAVEAYRQVG-FASTLRALKVLYDDCLKVQEASKKDDKIDADKDGIPDVEQVEAHQLVERKVLLFLKTTDPKAVSDALAAITSGWLSVLASLRIKFARAITLGAAIGDVLRKPATRYLSPFLHKVVPPDYER 221          
BLAST of jgi.p|Trimin1|338307 vs. uniprot
Match: A0A7S3UGJ9_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UGJ9_9CHLO)

HSP 1 Score: 86.3 bits (212), Expect = 1.360e-15
Identity = 56/175 (32.00%), Postives = 87/175 (49.71%), Query Frame = 1
Query:   52 LADVLIQLKPVFTHLEALTERAQPLLTNAELQARSAWAGLQPYHPEALGPILLGLALVFAGGAFPTLVTAVEAVRVSGTWPGVVDACGALRANYKAARAAQEKDDQVDADRDGIADVAQADARALLRRRGALLLKSVNADQXXXXXXXXXXXXXXXXXXXXXXXARALAIGTALG 576
            + + L +L P F  L ++ +R  PLL       +SA A L  +H + L   +LG  ++F GG FPTL++AVEA R+ G W         L  +Y+ A+AA EKDD++D D+DG  DV    A+ L  R+  + +K+ + D+                       AR + +G A+G
Sbjct:    1 MEEALARLVPAFQTLGSVLDRLAPLLVWLAEHLQSALAKLGQWHADVLFKCILGACMLFFGGYFPTLISAVEAYRICG-WKTTKQCLLDLYESYRVAKAASEKDDKLDEDKDGQPDVLSLSAKELAARKLKVAMKATDPDKVMYATIGLWAGFSAVAATLRMKFARFITLGGAIG 174          
BLAST of jgi.p|Trimin1|338307 vs. uniprot
Match: A0A7S3R0W0_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3R0W0_DUNTE)

HSP 1 Score: 85.9 bits (211), Expect = 2.650e-15
Identity = 81/305 (26.56%), Postives = 132/305 (43.28%), Query Frame = 1
Query:   49 RLADVLIQLKPVFTHLEALTERAQPLLTNAELQARSAWAGLQPYHPEALGPILLGLALVFAGGAFPTLVTAVEAVRVSGTWPGVVDACGALRANYKAARAAQEKDDQVDADRDGIADVAQADARALLRRRGALLLKSVNADQXXXXXXXXXXXXXXXXXXXXXXXARALAIGTALGRLTHDWCGAVVTEAAARALPPDARRAAPALVACAFRAAGVLAAAALARPVFAAFVAQRGAALAVGAAADLALRARCVAPGHWADAQRVRLAA--ALGAAGFAVQWWRAFQLAFALRVALLPLSAVEWAL 957
            R+ +++I++ P+     A+ +   P +          +   +    E    I LGL L+F GG FP L+ A+EA R++G W  +  +   L   YK A  A +KDD++DA+ DG+ DV Q  A+ +++R+  L L   +                          A+ + +G +L    ++    +   A  R LPP+  +    L++ A R+  V  A    R + A   A RG  + +   +    R         + +     AA  ALG+ GFA Q    F L F L + LLP   +EWAL
Sbjct:   28 RVEEIIIKITPIIETCAAIADFMGPYVDKGFQFGEKLYHSAERNGAEEYVQIGLGLLLLFFGGNFPVLIAAIEAFRITG-WDSMKTSFRILYKEYKKAMVAHKKDDEMDANNDGVPDVQQIGAQEVVKRKVLLFLTETDPKAVNEGVMGLSSGFMSVLATLRVKFAKTVTLGVSLADCFNETAQKIAGPALMRTLPPEHHKWIDLLISYACRSLAVTIAWWCQRIISALHCAMRGGQMILKGISRALARHNIQLSLDLSPSNPAFPAACTALGSVGFAFQAMHGFSLPFPLNILLLPFRIMEWAL 331          
BLAST of jgi.p|Trimin1|338307 vs. uniprot
Match: A0A0M9FY41_9TRYP (Uncharacterized protein n=1 Tax=Leptomonas pyrrhocoris TaxID=157538 RepID=A0A0M9FY41_9TRYP)

HSP 1 Score: 84.3 bits (207), Expect = 8.970e-15
Identity = 55/181 (30.39%), Postives = 89/181 (49.17%), Query Frame = 1
Query:  109 ERAQPLLTNAELQARSAWAGLQPYHPEALGPILLGLALVFAGGAFPTLVTAVEAVRVSGTWPGVVDACGALRANYKAARAAQEKDDQVDADRDGIADVAQADARALLRRRGALLLKSVNADQXXXXXXXXXXXXXXXXXXXXXXXARALAIGTALGRLTHDWCGAVVTEAAARALPPDARR 651
            ++A P L    + A +A    + Y  E   P+L+GLAL F GGA+  L+  VE VR+   W  + ++   L+ NY+ A     KD+ +DAD +G+ADV + D   L  R+ AL LKSV+ +                        AR+LA+G +L  +  ++    + +  +  LPPD ++
Sbjct:   46 DKAAPYLAQVPVYAAAAKEQAKKYRLEEFVPMLIGLALCFFGGAYTMLIAVVETVRLV-CWEDLQNSFAVLKRNYEIAAEQNRKDNAIDADGNGVADVQEMDRNELFTRKAALFLKSVDIESVQTAARTIASAFLSVMATLRVKFARSLALGGSLTNMAKEYIH--LEQWLSEVLPPDTKK 223          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|338307 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A836C7H9_9STRA1.920e-196100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0T5G8_9RHOD3.230e-2333.33Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A7S0R125_9CHLO3.020e-2230.41Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
C1MW76_MICPC2.390e-1930.29Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]
A0A7S0I9E2_MICPS9.280e-1929.51Hypothetical protein n=3 Tax=Micromonas TaxID=3883... [more]
R7QPM1_CHOCR4.950e-1740.15Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3JX97_9STRA6.750e-1628.43Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3UGJ9_9CHLO1.360e-1532.00Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A0A7S3R0W0_DUNTE2.650e-1526.56Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
A0A0M9FY41_9TRYP8.970e-1530.39Uncharacterized protein n=1 Tax=Leptomonas pyrrhoc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_90contigContig_90:548795..550698 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|338307|MIX47070_1_15
Max annot lvl2759|Eukaryota
EggNOG OGs2C1MM@1|root,2S2PZ@2759|Eukaryota
Evalue3.89e-24
Seed ortholog70448.A0A090MDD8
Hectar predicted targeting categoryother localisation
TranscriptId338629
TrackFilteredModels1
ProteinId338307
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|338307gene_11466Tribonema minus UTEX_B_3156 geneContig_90 548795..550698 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|338307Trimin1|338307|MIX47070_1_15Tribonema minus UTEX_B_3156 polypeptideContig_90 548795..550698 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11466_3exon_11466_3Tribonema minus UTEX_B_3156 exonContig_90 548795..549409 -
exon_11466_2exon_11466_2Tribonema minus UTEX_B_3156 exonContig_90 549694..549984 -
exon_11466_1exon_11466_1Tribonema minus UTEX_B_3156 exonContig_90 550621..550698 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11466CDS_11466Tribonema minus UTEX_B_3156 CDSContig_90 550621..550698 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11466 ID=mRNA_11466|Name=jgi.p|Trimin1|338307|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=984bp|location=Sequence derived from alignment at Contig_90:548795..550698- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTCGGACCCTGAGCACTCCACGTCCGTCGAGAAAACGACGGCGGATCG
GCTGGCCGATGTCTTGATCCAGCTGAAGCCCGTCTTCACACACCTGGAGG
CGCTGACGGAGAGGGCGCAGCCGCTGCTCACGAACGCCGAACTTCAAGCG
CGCAGCGCCTGGGCGGGCCTGCAACCCTACCACCCGGAGGCGCTCGGCCC
CATTCTACTAGGACTTGCGCTGGTGTTCGCGGGAGGCGCGTTTCCGACGC
TCGTCACCGCGGTGGAGGCGGTGCGCGTGAGCGGCACGTGGCCGGGGGTC
GTGGACGCGTGCGGCGCGCTGCGCGCCAACTACAAGGCCGCACGCGCCGC
GCAGGAGAAGGACGACCAGGTCGACGCGGACCGCGACGGCATCGCCGACG
TCGCGCAGGCCGACGCGCGCGCGCTCCTGCGGCGGCGCGGCGCGCTCCTC
CTCAAGTCCGTCAACGCGGACCAGGTGGCGGACGCCGCGCAGCGCCTCGC
GGCGGCGCTGCTCGCGGTGCTGGCCACCCTCCGCGTGCGCGCCGCGCGCG
CGCTCGCCATCGGCACCGCCCTCGGGCGCCTCACGCACGACTGGTGCGGC
GCAGTCGTGACGGAGGCGGCGGCGCGCGCGCTGCCGCCGGACGCGCGCCG
CGCCGCGCCCGCGCTCGTCGCGTGCGCCTTCCGCGCCGCCGGCGTGCTCG
CCGCGGCGGCGCTCGCGCGCCCCGTCTTTGCGGCGTTCGTCGCGCAGCGC
GGCGCGGCGCTCGCCGTGGGCGCCGCCGCCGACCTCGCGCTGCGCGCGCG
CTGCGTCGCGCCGGGGCACTGGGCGGACGCGCAGCGCGTGCGCCTCGCCG
CCGCGCTCGGCGCCGCCGGCTTCGCGGTGCAGTGGTGGCGCGCGTTCCAG
CTCGCGTTCGCGCTGCGCGTCGCGCTGCTGCCGCTGTCGGCGGTGGAGTG
GGCGCTCACGCTGTGCTTCGCGGTTCTCGTCTGA
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protein sequence of jgi.p|Trimin1|338307

>Trimin1|338307|MIX47070_1_15 ID=Trimin1|338307|MIX47070_1_15|Name=jgi.p|Trimin1|338307|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=328bp
MSDPEHSTSVEKTTADRLADVLIQLKPVFTHLEALTERAQPLLTNAELQA
RSAWAGLQPYHPEALGPILLGLALVFAGGAFPTLVTAVEAVRVSGTWPGV
VDACGALRANYKAARAAQEKDDQVDADRDGIADVAQADARALLRRRGALL
LKSVNADQVADAAQRLAAALLAVLATLRVRAARALAIGTALGRLTHDWCG
AVVTEAAARALPPDARRAAPALVACAFRAAGVLAAAALARPVFAAFVAQR
GAALAVGAAADLALRARCVAPGHWADAQRVRLAAALGAAGFAVQWWRAFQ
LAFALRVALLPLSAVEWALTLCFAVLV*
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mRNA from alignment at Contig_90:548795..550698-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11466 ID=mRNA_11466|Name=jgi.p|Trimin1|338307|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1904bp|location=Sequence derived from alignment at Contig_90:548795..550698- (Tribonema minus UTEX_B_3156 )
ATGTCGGACCCTGAGCACTCCACGTCCGTCGAGAAAACGACGGCGGATCG GCTGGCCGATGTCTTGATCCAGCTGAAGGTGAGCATCTCCGTGAGAGTAA GAGTGAAAATCCATCATTACCACTGTGTGTGTGTGTGCTTTTTCAGGCAC AGTACCTCGCAAGAGCGCTTTGCAAACCTGCTTGATATGGCCGCCTTTGC CTGCACTTGCTACAGCTTGGCAACATTGCATTGAGCCTTGAATGTATATC CAATGTTGTTGAACTCTTGGCACGTGTGTGTGCCTAGCACGTTGCTTTAG AAACAGTGACACCAGAGTGGATGGCCAGAGGTGCATCATGCCAGTGTCTC CAGTACATATTAAGGAATAGGCTCAGGTTTGCTTCTTGCGCAACATCGAC AGGCATCACCACTGCACAATGTTGATGAAGCAGCGCGACACGAAGACGAC TCAAAACAATTCGTGGCAAAGTCTGAACAACTAAATGCTTTTGCTGCTGT CGCAAGTGTCTGCCCCTCCTCTCACCATGCGCGCGCGTGCGCGCGCACAC TACACACACACACAAACACAAACACACACACACACACACACACACACACA CACACACACACACACACACACACACACACACACACACACACACGACCTAC ACACGGCACCCTGCGCAAAAATTGCACTCAATCTCATCGCTGCACCCCCC CCCCCCCTGCGCAGCCCGTCTTCACACACCTGGAGGCGCTGACGGAGAGG GCGCAGCCGCTGCTCACGAACGCCGAACTTCAAGCGCGCAGCGCCTGGGC GGGCCTGCAACCCTACCACCCGGAGGCGCTCGGCCCCATTCTACTAGGAC TTGCGCTGGTGTTCGCGGGAGGCGCGTTTCCGACGCTCGTCACCGCGGTG GAGGCGGTGCGCGTGAGCGGCACGTGGCCGGGGGTCGTGGACGCGTGCGG CGCGCTGCGCGCCAACTACAAGGCCGCACGCGCCGCGCAGGAGAAGGACG ACCAGGTATGTGGGTACTGAAGAGCTCTACGAATCTTTTAATTCGTTCCC ATTGAGGAAGGACAGTGATGACGACCCGGGCCTCATGGGTTGACTTCAGT TTCGATCCTGAGATGGTGACGACGGTGGCGAGGGGCCGATGCAGCGCATG CTGTTGCTGCACGTGTGTCGATCATGCAGACTTGAGCGCATCATCGCTGA GGCAAGAGCAGTGCGAGCCGCGCTCCCATCCTACGCGCTCACATCACAAC GCACGCGCTTCTCACATACGCACACGCACGTACATGCAGGTCGACGCGGA CCGCGACGGCATCGCCGACGTCGCGCAGGCCGACGCGCGCGCGCTCCTGC GGCGGCGCGGCGCGCTCCTCCTCAAGTCCGTCAACGCGGACCAGGTGGCG GACGCCGCGCAGCGCCTCGCGGCGGCGCTGCTCGCGGTGCTGGCCACCCT CCGCGTGCGCGCCGCGCGCGCGCTCGCCATCGGCACCGCCCTCGGGCGCC TCACGCACGACTGGTGCGGCGCAGTCGTGACGGAGGCGGCGGCGCGCGCG CTGCCGCCGGACGCGCGCCGCGCCGCGCCCGCGCTCGTCGCGTGCGCCTT CCGCGCCGCCGGCGTGCTCGCCGCGGCGGCGCTCGCGCGCCCCGTCTTTG CGGCGTTCGTCGCGCAGCGCGGCGCGGCGCTCGCCGTGGGCGCCGCCGCC GACCTCGCGCTGCGCGCGCGCTGCGTCGCGCCGGGGCACTGGGCGGACGC GCAGCGCGTGCGCCTCGCCGCCGCGCTCGGCGCCGCCGGCTTCGCGGTGC AGTGGTGGCGCGCGTTCCAGCTCGCGTTCGCGCTGCGCGTCGCGCTGCTG CCGCTGTCGGCGGTGGAGTGGGCGCTCACGCTGTGCTTCGCGGTTCTCGT CTGA
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Coding sequence (CDS) from alignment at Contig_90:548795..550698-

>mRNA_11466 ID=mRNA_11466|Name=jgi.p|Trimin1|338307|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=984bp|location=Sequence derived from alignment at Contig_90:548795..550698- (Tribonema minus UTEX_B_3156 )
ATGTCGGACCCTGAGCACTCCACGTCCGTCGAGAAAACGACGGCGGATCG
GCTGGCCGATGTCTTGATCCAGCTGAAGCCCGTCTTCACACACCTGGAGG
CGCTGACGGAGAGGGCGCAGCCGCTGCTCACGAACGCCGAACTTCAAGCG
CGCAGCGCCTGGGCGGGCCTGCAACCCTACCACCCGGAGGCGCTCGGCCC
CATTCTACTAGGACTTGCGCTGGTGTTCGCGGGAGGCGCGTTTCCGACGC
TCGTCACCGCGGTGGAGGCGGTGCGCGTGAGCGGCACGTGGCCGGGGGTC
GTGGACGCGTGCGGCGCGCTGCGCGCCAACTACAAGGCCGCACGCGCCGC
GCAGGAGAAGGACGACCAGGTCGACGCGGACCGCGACGGCATCGCCGACG
TCGCGCAGGCCGACGCGCGCGCGCTCCTGCGGCGGCGCGGCGCGCTCCTC
CTCAAGTCCGTCAACGCGGACCAGGTGGCGGACGCCGCGCAGCGCCTCGC
GGCGGCGCTGCTCGCGGTGCTGGCCACCCTCCGCGTGCGCGCCGCGCGCG
CGCTCGCCATCGGCACCGCCCTCGGGCGCCTCACGCACGACTGGTGCGGC
GCAGTCGTGACGGAGGCGGCGGCGCGCGCGCTGCCGCCGGACGCGCGCCG
CGCCGCGCCCGCGCTCGTCGCGTGCGCCTTCCGCGCCGCCGGCGTGCTCG
CCGCGGCGGCGCTCGCGCGCCCCGTCTTTGCGGCGTTCGTCGCGCAGCGC
GGCGCGGCGCTCGCCGTGGGCGCCGCCGCCGACCTCGCGCTGCGCGCGCG
CTGCGTCGCGCCGGGGCACTGGGCGGACGCGCAGCGCGTGCGCCTCGCCG
CCGCGCTCGGCGCCGCCGGCTTCGCGGTGCAGTGGTGGCGCGCGTTCCAG
CTCGCGTTCGCGCTGCGCGTCGCGCTGCTGCCGCTGTCGGCGGTGGAGTG
GGCGCTCACGCTGTGCTTCGCGGTTCTCGTCTGA
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