mRNA_11454 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|338282 vs. uniprot
Match: A0A835YJD5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJD5_9STRA) HSP 1 Score: 656 bits (1692), Expect = 9.840e-238 Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 1 Query: 1 MKPWAQFVVALVLYLFHMFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAGEHLRFGVIVGALLLRREEGKTGKALGGGAAVMRGRSAPWSLDRSLTAKLPLLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVLKPFFRTKESKWLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCPLPPDTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 987 MKPWAQFVVALVLYLFHMFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAGEHLRFGVIVGALLLRREEGKTGKALGGGAAVMRGRSAPWSLDRSLTAKLPLLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVLKPFFRTKESKWLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCPLPPDTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV Sbjct: 1 MKPWAQFVVALVLYLFHMFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAGEHLRFGVIVGALLLRREEGKTGKALGGGAAVMRGRSAPWSLDRSLTAKLPLLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVLKPFFRTKESKWLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCPLPPDTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 329
BLAST of jgi.p|Trimin1|338282 vs. uniprot
Match: D7G131_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G131_ECTSI) HSP 1 Score: 374 bits (959), Expect = 4.050e-123 Identity = 200/344 (58.14%), Postives = 248/344 (72.09%), Query Frame = 1 Query: 1 MKPWAQFVVALVLYLFHMFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAG---------EHLRFGVIVGALLLRREEGKTGKALGGGAAVM----RGR-SAPWSLDRS-LTAKLPLLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVLKPFFRTKESKWLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCPLPPDTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 987 M P Q +++ LY FHM LSK + FP+QLIPN++GL SVGLDT AG LR G+ + L R G GK GG R R PW L+ + + KLPL +L FAY+ SG + EY+LYGL+ G+ ++VAMHRSLQVLL HLVWV G IL ++ FF T++ W+ +KWR++WLWWVVGGY+ SS LF MADL NQF+CPLPPDTESVV KIINPE+ND+AA+AVGSIAPC++APWWEEVLYRGF+LPALTLYLP A+P + LFAAHH+++QAM+PLS+LGLVW+LLY+ SGNLLVT++IH MWNSRVFLGSLLG+ Sbjct: 206 MHPAGQATLSIGLYFFHMLHLSKSGLTFPIQLIPNNHGLFHSVGLDTAAGFAVLGVAAWSRLRSGLPLFPPLGGR--GVEGKGKGGXXXXXXXXXRERVKVPWKLEGARVKKKLPLTFTVLIFAYFLSGLGSTVCEYLLYGLSYLGVGMSVAMHRSLQVLLSHLVWVYMGVRILSMAVRSFFDTEKGSWVGMKWRSNWLWWVVGGYFVSSSLFNMADLANQFLCPLPPDTESVVVKIINPENNDIAAMAVGSIAPCMTAPWWEEVLYRGFLLPALTLYLPLKAALPAGSFLFAAHHMNLQAMLPLSVLGLVWSLLYLYSGNLLVTVLIHAMWNSRVFLGSLLGL 547
BLAST of jgi.p|Trimin1|338282 vs. uniprot
Match: A0A0G4G260_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G260_VITBC) HSP 1 Score: 332 bits (852), Expect = 8.400e-110 Identity = 186/343 (54.23%), Postives = 230/343 (67.06%), Query Frame = 1 Query: 52 MFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAGEHLRFGVIVG--ALLLRREEGKTG----KAL---------GGGAAVMRGRSA-----------PWSLDRSLTAKLPLLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVLKPFFRTKESKWLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCPLPPDT-----ESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 987 M VLS+ CI FPVQLIPN YGL QS+GLD+ AG +G ++L R G KAL A V G PW + K ++ LL AY+ SG+ A+ +E+ LYGL+A G+P+++AMHRSLQVLLGHL+WV G ILG L+PFF + S W R++WR WLWWVVGGYY SS LF AD++NQ V LPP ESVV K+INPE+ND+ ALAVGSIAPC+SAPWWEEVLYRGF LPAL++++P +A+PVSAVLFA HH+SIQ+MIPL+ LGL W +LY+LS NLLVT++IH MWNSRVFLGS LG+ Sbjct: 1 MLVLSRSCIAFPVQLIPNKYGLFQSIGLDSCAGLVALAAAYIGRVSMLTNRAAALRGHRDDKALPPVDGNRPNATTAVVTSGEDGQPDPLLPLSPYPWKIPVKSRPKALIVLALLILAYFSSGYGAVVFEWSLYGLSALGVPISIAMHRSLQVLLGHLLWVGTGCLILGIGLRPFFPPRGS-WYRLQWRRSWLWWVVGGYYVSSLLFNGADVINQLV--LPPSVFQEGGESVVTKMINPENNDILALAVGSIAPCVSAPWWEEVLYRGFTLPALSVFMPPWVALPVSAVLFAVHHMSIQSMIPLATLGLAWGILYMLSNNLLVTVLIHAMWNSRVFLGSFLGL 340
BLAST of jgi.p|Trimin1|338282 vs. uniprot
Match: A0A7S2B7Y7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B7Y7_9STRA) HSP 1 Score: 321 bits (822), Expect = 2.350e-106 Identity = 163/257 (63.42%), Postives = 202/257 (78.60%), Query Frame = 1 Query: 232 GAAVMRGR--SAPWSLDRS-LTAKLPLLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVLKPFFRTKESKWLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCPLPP--DTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 987 GA+ R R PW LD + L K+ L LL Y SG+ AL WEYVLYGLAA G+P++VAMHRS+QVLLGHLVW+ AG ILG+VL+PFF + E WL +KWRT WLWWVVGGYY SS+ F ADLLNQF+ P +E+VVAK+INPE+NDLAA+A+GSIAPC +APWWEEVLYRGF+LP+L +++P +AVP+SAV+FAAHH+ +M+PL+ LGLVWA+LY+ S NL VT++IHGMWNSRVFLGSLLG+ Sbjct: 10 GASFKRRRPLELPWKLDAAQLKFKVIWLFALLCVTYQASGYVALLWEYVLYGLAALGVPMSVAMHRSMQVLLGHLVWLFAGVKILGSVLRPFF-SDEGGWLSMKWRTRWLWWVVGGYYVSSWAFNCADLLNQFILPEVAFEASETVVAKMINPENNDLAAMAIGSIAPCFTAPWWEEVLYRGFLLPSLAIHMPLWLAVPLSAVMFAAHHMQSCSMVPLTALGLVWAVLYIRSRNLFVTVLIHGMWNSRVFLGSLLGI 265
BLAST of jgi.p|Trimin1|338282 vs. uniprot
Match: A0A7S2WLY0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLY0_9STRA) HSP 1 Score: 310 bits (793), Expect = 8.450e-100 Identity = 173/343 (50.44%), Postives = 228/343 (66.47%), Query Frame = 1 Query: 4 KPWAQFVVALVLYLFHMFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAGEHLRFGVIVGALLLRREEGKTGKALGGGAAVMRGRSAPWSLDRSLTAKLPLLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVLKPFFRT------------KESKWLRIKWR-THWLWWVVGGYYASSFLFTMADLLNQFVCP--LPPDTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 987 P AQ A+ LY H VLS+ + FPVQLIPN GL SVG D+LAG + A RR KT + PWS + K L + L AY+ SG +A+ EY LYGLAA+G+P+T+ MHR+LQVLL HLVWV +G A+L L PFF ++ +W+ ++W + L WV+GGY S ++F ADLLNQF+ P + ESVV ++INPE+NDLAA+AVG++APCL+APWWEE+LYRGF+LPAL+++LPR +++P+SA+LFAAHH S+ +MIPL+ LGL WA++Y+LSGNL+VT+ IH MWNSRVFLGSLLGV Sbjct: 92 SPVAQLAAAVGLYTLHTLVLSRAALIFPVQLIPNSDGLGLSVGYDSLAG--MATACFALARWKRRGLAKT--------------NTPWSFETRSFGKPALCFLSLIVAYWVSGHAAILVEYGLYGLAASGVPITIPMHRALQVLLSHLVWVTSGVALLQFFLNPFFAKNSRPPAGQTDSKQDQRWMSVQWNGANLLGWVIGGYAVSCWVFNWADLLNQFIIPQEVLDGPESVVTQMINPENNDLAAMAVGAVAPCLTAPWWEEILYRGFLLPALSMWLPRRISLPLSALLFAAHHQSMSSMIPLAALGLTWAVVYLLSGNLVVTMAIHAMWNSRVFLGSLLGV 418
BLAST of jgi.p|Trimin1|338282 vs. uniprot
Match: K0TLB3_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLB3_THAOC) HSP 1 Score: 302 bits (773), Expect = 8.770e-95 Identity = 176/371 (47.44%), Postives = 233/371 (62.80%), Query Frame = 1 Query: 1 MKPWAQFVVALVLYLFHMFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAGEHLRFGVIVGALLLRREEGKTGKALGGGAAVM--------RGRSAPWSL-----------------DRSLTAKLPLLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVL--KPFF------------RTKESKWLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCP---LPPDTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 987 ++P QFVV L +Y+FH+ L+++ I FPVQLIPND G QS+GLD+LAG L F G + LR+ + ++ GA + +G APWSL D ++ + + +LL F Y+ +G +L +E +LY A G PLTV MHRSL VLLGHL WV+ GSAIL VL KPFF + + +W +W T+WLWW +GGY+ S++LF ++D +NQ V P E VV+++INPE+ND A VG IAPCLSAPWWEEVLYRG++LPAL L++ +V VS VLF+AHHLS+ IPL++LG +WA LY SGN+LVTI+IHGMWNSRVFLGS LG+ Sbjct: 215 LRPRTQFVVGLGMYIFHLRFLTQYGIAFPVQLIPNDEGWFQSIGLDSLAGM-LSF---AGLVWLRKASVEHSESSTEGATIAVPPLWTGPKGAEAPWSLGSRRKRRRKSDGDEEKVDHPRSSSI-IAMVLLTFGYFSTGRFSLFFENILYAAAGYGFPLTVPMHRSLVVLLGHLAWVVVGSAILAFVLSPKPFFGGGLEPASEGRAKRRPRRWYTNRWDTYWLWWTMGGYFVSAWLFNISDFVNQIVLPPYLFAQQAEGVVSQLINPENNDFMASLVGYIAPCLSAPWWEEVLYRGYLLPALGLFMGFWPSVFVSGVLFSAHHLSVMGAIPLAVLGWLWAALYAKSGNILVTILIHGMWNSRVFLGSWLGL 580
BLAST of jgi.p|Trimin1|338282 vs. uniprot
Match: W7TRA3_9STRA (Caax amino terminal protease family domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRA3_9STRA) HSP 1 Score: 299 bits (766), Expect = 1.100e-94 Identity = 171/335 (51.04%), Postives = 220/335 (65.67%), Query Frame = 1 Query: 1 MKPWAQFVVALVLYLFHMFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAGEHLRFGVIVGALLLRREEGKTGKALGGGAAVMRGRSAPWSLDRSLTAKLPLLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVL-----KPFFRTKESKWLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCPLPP-DTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 987 + P Q +V + LY FHM VLSK +PFP QL+PN +GL QS+G+D+LAG V+ A RR G K + GA R P++ + K+ + LL AY SG SA W ++GL+ L VA+ R++QVL GHLVWVL G IL KPFF K+S W++ W T+WLWW +GGYY SS F +AD +NQ V P + +SVV ++INPE ND+ A+ VGS+APC+SAPWWEEVLYRGF+LPAL L+ P +A VSAV+FAAHH+S+ MIPL+ LG +WA+LY+LSGNLLV I IH +WNSRVFLGSLLG+ Sbjct: 181 LHPLIQMLVMVALYFFHMLVLSKVAMPFPFQLVPNTHGLFQSIGMDSLAG----LLVLGAAAYFRRARGLPLKPVVFGA-----RPLPFNPPKRGRGKVWRILFLLMVAYLTSG-SASKWVEDVFGLS----ELNVALGRAVQVLAGHLVWVLLGVGILKTQAGEGGDKPFFG-KKSVWMKSSWNTYWLWWAIGGYYVSSLAFHVADTVNQVVLPASAFEVDSVVTQMINPEGNDVVAMLVGSLAPCVSAPWWEEVLYRGFLLPALYLFYPADVATLVSAVIFAAHHMSMSGMIPLTTLGYLWAVLYLLSGNLLVPIAIHSLWNSRVFLGSLLGI 500
BLAST of jgi.p|Trimin1|338282 vs. uniprot
Match: A0A2V3IW85_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW85_9FLOR) HSP 1 Score: 297 bits (760), Expect = 2.400e-94 Identity = 166/329 (50.46%), Postives = 217/329 (65.96%), Query Frame = 1 Query: 4 KPWAQFVVALVLYLFHMFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAGEHLRFGVIVGALLLRREEGKTGKALGGGAAVMRGRSAPWSLDRSLTAKLPLLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVLKPFFRTKESKWLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCPLPP-DTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 987 +PW Q + L LY FH+F LS F LIPN L QS+G +++AG V V LL RR G++ V+ + PW + R ++ +LL AY SG+ A+ E VLY LA +G+PLTVA R+ +VLLGHL+WV G AIL LKPFF K + WLR KWR++WLWW +GGYY S+ F +AD+LNQ + P + E+VV+K+INPE+ D A+A+GSI PC+SAP +EEVLYRGF+LPAL +LP A+P S+VLFA HHL+ ++PLSMLG +WA+LY S NL VT++IH MWNSRVFLGSLLG+ Sbjct: 126 RPWLQLAILLPLYAFHLFFLSTKGFKFKKPLIPNSKNLFQSIGYESIAGAI----VAVVMLLWRRYILPQGQSQPVLPNVLTVNNPPWKVPRDAKRRIGQTTILLVVAYLLSGYGAVFSEQVLYVLAGSGVPLTVATTRAWKVLLGHLMWVYMGIAILRR-LKPFFPPKGT-WLRWKWRSNWLWWAIGGYYVSAMFFNVADVLNQLLLPASLFEEETVVSKLINPENKDRVAMAIGSIGPCVSAPVFEEVLYRGFLLPALACFLPMWAAIPASSVLFAIHHLNPTMILPLSMLGFIWAILYSKSRNLTVTVLIHAMWNSRVFLGSLLGL 448
BLAST of jgi.p|Trimin1|338282 vs. uniprot
Match: B8BQQ7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQQ7_THAPS) HSP 1 Score: 295 bits (754), Expect = 1.430e-92 Identity = 176/373 (47.18%), Postives = 227/373 (60.86%), Query Frame = 1 Query: 1 MKPWAQFVVALVLYLFHMFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAGEHLRFGVIVGALLLRREEGKTGKALGGGAAVM------RGRSAPWSL--------DRSLTAKLP-------LLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVL--KPFF---------RTKESK---------WLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCP---LPPDTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 987 ++P QF++ L+LY+FH+ +L++H I FP QLIPND G QS+GLD++AG L F G + LR+ + G A+ + APW L + T++ P + MLL AY+ +G +L +E LY A G PLTVAMHRSL VLLGHL WVL GS IL VL KPFF T SK W KW T+WLWW +GGY+ S++LF +AD +NQ + P E VV+++INPE+ D A VG IAPCLSAPWWEEVLYRG++LPAL L++ +V VS VLF+ HHLS+ IPL++LG WA LY SGN+LVT++IHGMWNSRVFLGS LG+ Sbjct: 158 LRPAYQFIIGLLLYIFHLRILTQHGITFPFQLIPNDEGWFQSIGLDSIAGM-LAF---AGLVWLRKASVAHADSSGAKVAIPPIWSDPTEKEAPWKLLPKKKKTGADATTSQQPHPRTTSVVAFMLLTVAYFSTGRFSLLFENGLYAAAGYGFPLTVAMHRSLVVLLGHLTWVLVGSGILAGVLSPKPFFGGGWATKKGNTSNSKKEKTLRPYRWYTNKWDTYWLWWTIGGYFVSAWLFNIADFMNQILLPPQLFAQQAEGVVSQLINPENLDFLASLVGYIAPCLSAPWWEEVLYRGYLLPALRLFMGFWPSVFVSGVLFSVHHLSVMGAIPLAVLGWTWAALYAKSGNILVTMLIHGMWNSRVFLGSWLGL 526
BLAST of jgi.p|Trimin1|338282 vs. uniprot
Match: A0A7S1XHH8_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XHH8_9RHOD) HSP 1 Score: 289 bits (739), Expect = 2.650e-92 Identity = 161/330 (48.79%), Postives = 214/330 (64.85%), Query Frame = 1 Query: 1 MKPWAQFVVALVLYLFHMFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAGEHLRFGVIVGALLLRREEGKTGKALGGGAAVMRGRSAPWSLDRSLTAKLPLLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVLKPFFRTKESKWLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCPLPP-DTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 987 M P Q V L LY H+ +SK P P QLIPND GL VGLD++ G ++ V+VG R+ K G+ +++ + PW + R L L +L +Y SG+ A+ E VL L+ G+PLT+ R+ +VLLGHL+WV G IL L PFF K + WLR KW +WLWW +GGY S+ LF AD++NQF+ P ESVV K++NPE+ DL A+ +GSI PC+SAP +EEVLYRGF+LPALT + P S+A+PVS+VLFA HHL++ ++PLS+LGL WA++Y S NL+VTI+IH MWNSRVFL SLLG+ Sbjct: 50 MHPILQLAVLLGLYAIHLLFISKKTFPLPRQLIPNDKGLLNEVGLDSIVG-YIVILVVVGW----RKIMKLGRPF---PNLLQSENPPWKVPRQLKRTLAPTTGILIVSYLASGYGAVFCEQVLCLLSVYGVPLTIPTLRAWKVLLGHLMWVYMGIRILNRRLSPFFPPKGT-WLRWKWNANWLWWSIGGYAVSALLFNCADVVNQFILPSSVFSEESVVNKLVNPENRDLFAMGIGSIGPCMSAPIFEEVLYRGFLLPALTAFFPLSLAIPVSSVLFAIHHLNLSGVLPLSVLGLAWAIIYTQSRNLVVTILIHAMWNSRVFLVSLLGL 370 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|338282 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11454 ID=mRNA_11454|Name=jgi.p|Trimin1|338282|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1033bp|location=Sequence derived from alignment at Contig_90:452218..457153- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAAACCCTGGGCGCAGTTCGTCGTTGCTCTGGTGCTGTACTTGTTCCAback to top protein sequence of jgi.p|Trimin1|338282 >Trimin1|338282|MIX47045_11_48 ID=Trimin1|338282|MIX47045_11_48|Name=jgi.p|Trimin1|338282|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=330bp MKPWAQFVVALVLYLFHMFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAGback to top mRNA from alignment at Contig_90:452218..457153- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11454 ID=mRNA_11454|Name=jgi.p|Trimin1|338282|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4936bp|location=Sequence derived from alignment at Contig_90:452218..457153- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_90:452218..457153- >mRNA_11454 ID=mRNA_11454|Name=jgi.p|Trimin1|338282|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=990bp|location=Sequence derived from alignment at Contig_90:452218..457153- (Tribonema minus UTEX_B_3156 )back to top |