mRNA_11454 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|338282
Unique NamemRNA_11454
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|338282 vs. uniprot
Match: A0A835YJD5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJD5_9STRA)

HSP 1 Score: 656 bits (1692), Expect = 9.840e-238
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 1
Query:    1 MKPWAQFVVALVLYLFHMFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAGEHLRFGVIVGALLLRREEGKTGKALGGGAAVMRGRSAPWSLDRSLTAKLPLLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVLKPFFRTKESKWLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCPLPPDTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 987
            MKPWAQFVVALVLYLFHMFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAGEHLRFGVIVGALLLRREEGKTGKALGGGAAVMRGRSAPWSLDRSLTAKLPLLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVLKPFFRTKESKWLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCPLPPDTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV
Sbjct:    1 MKPWAQFVVALVLYLFHMFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAGEHLRFGVIVGALLLRREEGKTGKALGGGAAVMRGRSAPWSLDRSLTAKLPLLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVLKPFFRTKESKWLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCPLPPDTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 329          
BLAST of jgi.p|Trimin1|338282 vs. uniprot
Match: D7G131_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G131_ECTSI)

HSP 1 Score: 374 bits (959), Expect = 4.050e-123
Identity = 200/344 (58.14%), Postives = 248/344 (72.09%), Query Frame = 1
Query:    1 MKPWAQFVVALVLYLFHMFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAG---------EHLRFGVIVGALLLRREEGKTGKALGGGAAVM----RGR-SAPWSLDRS-LTAKLPLLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVLKPFFRTKESKWLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCPLPPDTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 987
            M P  Q  +++ LY FHM  LSK  + FP+QLIPN++GL  SVGLDT AG           LR G+ +   L  R  G  GK  GG         R R   PW L+ + +  KLPL   +L FAY+ SG  +   EY+LYGL+  G+ ++VAMHRSLQVLL HLVWV  G  IL   ++ FF T++  W+ +KWR++WLWWVVGGY+ SS LF MADL NQF+CPLPPDTESVV KIINPE+ND+AA+AVGSIAPC++APWWEEVLYRGF+LPALTLYLP   A+P  + LFAAHH+++QAM+PLS+LGLVW+LLY+ SGNLLVT++IH MWNSRVFLGSLLG+
Sbjct:  206 MHPAGQATLSIGLYFFHMLHLSKSGLTFPIQLIPNNHGLFHSVGLDTAAGFAVLGVAAWSRLRSGLPLFPPLGGR--GVEGKGKGGXXXXXXXXXRERVKVPWKLEGARVKKKLPLTFTVLIFAYFLSGLGSTVCEYLLYGLSYLGVGMSVAMHRSLQVLLSHLVWVYMGVRILSMAVRSFFDTEKGSWVGMKWRSNWLWWVVGGYFVSSSLFNMADLANQFLCPLPPDTESVVVKIINPENNDIAAMAVGSIAPCMTAPWWEEVLYRGFLLPALTLYLPLKAALPAGSFLFAAHHMNLQAMLPLSVLGLVWSLLYLYSGNLLVTVLIHAMWNSRVFLGSLLGL 547          
BLAST of jgi.p|Trimin1|338282 vs. uniprot
Match: A0A0G4G260_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G260_VITBC)

HSP 1 Score: 332 bits (852), Expect = 8.400e-110
Identity = 186/343 (54.23%), Postives = 230/343 (67.06%), Query Frame = 1
Query:   52 MFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAGEHLRFGVIVG--ALLLRREEGKTG----KAL---------GGGAAVMRGRSA-----------PWSLDRSLTAKLPLLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVLKPFFRTKESKWLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCPLPPDT-----ESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 987
            M VLS+ CI FPVQLIPN YGL QS+GLD+ AG        +G  ++L  R     G    KAL            A V  G              PW +      K  ++  LL  AY+ SG+ A+ +E+ LYGL+A G+P+++AMHRSLQVLLGHL+WV  G  ILG  L+PFF  + S W R++WR  WLWWVVGGYY SS LF  AD++NQ V  LPP       ESVV K+INPE+ND+ ALAVGSIAPC+SAPWWEEVLYRGF LPAL++++P  +A+PVSAVLFA HH+SIQ+MIPL+ LGL W +LY+LS NLLVT++IH MWNSRVFLGS LG+
Sbjct:    1 MLVLSRSCIAFPVQLIPNKYGLFQSIGLDSCAGLVALAAAYIGRVSMLTNRAAALRGHRDDKALPPVDGNRPNATTAVVTSGEDGQPDPLLPLSPYPWKIPVKSRPKALIVLALLILAYFSSGYGAVVFEWSLYGLSALGVPISIAMHRSLQVLLGHLLWVGTGCLILGIGLRPFFPPRGS-WYRLQWRRSWLWWVVGGYYVSSLLFNGADVINQLV--LPPSVFQEGGESVVTKMINPENNDILALAVGSIAPCVSAPWWEEVLYRGFTLPALSVFMPPWVALPVSAVLFAVHHMSIQSMIPLATLGLAWGILYMLSNNLLVTVLIHAMWNSRVFLGSFLGL 340          
BLAST of jgi.p|Trimin1|338282 vs. uniprot
Match: A0A7S2B7Y7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B7Y7_9STRA)

HSP 1 Score: 321 bits (822), Expect = 2.350e-106
Identity = 163/257 (63.42%), Postives = 202/257 (78.60%), Query Frame = 1
Query:  232 GAAVMRGR--SAPWSLDRS-LTAKLPLLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVLKPFFRTKESKWLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCPLPP--DTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 987
            GA+  R R    PW LD + L  K+  L  LL   Y  SG+ AL WEYVLYGLAA G+P++VAMHRS+QVLLGHLVW+ AG  ILG+VL+PFF + E  WL +KWRT WLWWVVGGYY SS+ F  ADLLNQF+ P      +E+VVAK+INPE+NDLAA+A+GSIAPC +APWWEEVLYRGF+LP+L +++P  +AVP+SAV+FAAHH+   +M+PL+ LGLVWA+LY+ S NL VT++IHGMWNSRVFLGSLLG+
Sbjct:   10 GASFKRRRPLELPWKLDAAQLKFKVIWLFALLCVTYQASGYVALLWEYVLYGLAALGVPMSVAMHRSMQVLLGHLVWLFAGVKILGSVLRPFF-SDEGGWLSMKWRTRWLWWVVGGYYVSSWAFNCADLLNQFILPEVAFEASETVVAKMINPENNDLAAMAIGSIAPCFTAPWWEEVLYRGFLLPSLAIHMPLWLAVPLSAVMFAAHHMQSCSMVPLTALGLVWAVLYIRSRNLFVTVLIHGMWNSRVFLGSLLGI 265          
BLAST of jgi.p|Trimin1|338282 vs. uniprot
Match: A0A7S2WLY0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLY0_9STRA)

HSP 1 Score: 310 bits (793), Expect = 8.450e-100
Identity = 173/343 (50.44%), Postives = 228/343 (66.47%), Query Frame = 1
Query:    4 KPWAQFVVALVLYLFHMFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAGEHLRFGVIVGALLLRREEGKTGKALGGGAAVMRGRSAPWSLDRSLTAKLPLLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVLKPFFRT------------KESKWLRIKWR-THWLWWVVGGYYASSFLFTMADLLNQFVCP--LPPDTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 987
             P AQ   A+ LY  H  VLS+  + FPVQLIPN  GL  SVG D+LAG  +       A   RR   KT              + PWS +     K  L  + L  AY+ SG +A+  EY LYGLAA+G+P+T+ MHR+LQVLL HLVWV +G A+L   L PFF              ++ +W+ ++W   + L WV+GGY  S ++F  ADLLNQF+ P  +    ESVV ++INPE+NDLAA+AVG++APCL+APWWEE+LYRGF+LPAL+++LPR +++P+SA+LFAAHH S+ +MIPL+ LGL WA++Y+LSGNL+VT+ IH MWNSRVFLGSLLGV
Sbjct:   92 SPVAQLAAAVGLYTLHTLVLSRAALIFPVQLIPNSDGLGLSVGYDSLAG--MATACFALARWKRRGLAKT--------------NTPWSFETRSFGKPALCFLSLIVAYWVSGHAAILVEYGLYGLAASGVPITIPMHRALQVLLSHLVWVTSGVALLQFFLNPFFAKNSRPPAGQTDSKQDQRWMSVQWNGANLLGWVIGGYAVSCWVFNWADLLNQFIIPQEVLDGPESVVTQMINPENNDLAAMAVGAVAPCLTAPWWEEILYRGFLLPALSMWLPRRISLPLSALLFAAHHQSMSSMIPLAALGLTWAVVYLLSGNLVVTMAIHAMWNSRVFLGSLLGV 418          
BLAST of jgi.p|Trimin1|338282 vs. uniprot
Match: K0TLB3_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLB3_THAOC)

HSP 1 Score: 302 bits (773), Expect = 8.770e-95
Identity = 176/371 (47.44%), Postives = 233/371 (62.80%), Query Frame = 1
Query:    1 MKPWAQFVVALVLYLFHMFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAGEHLRFGVIVGALLLRREEGKTGKALGGGAAVM--------RGRSAPWSL-----------------DRSLTAKLPLLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVL--KPFF------------RTKESKWLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCP---LPPDTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 987
            ++P  QFVV L +Y+FH+  L+++ I FPVQLIPND G  QS+GLD+LAG  L F    G + LR+   +  ++   GA +         +G  APWSL                 D   ++ + +  +LL F Y+ +G  +L +E +LY  A  G PLTV MHRSL VLLGHL WV+ GSAIL  VL  KPFF            + +  +W   +W T+WLWW +GGY+ S++LF ++D +NQ V P        E VV+++INPE+ND  A  VG IAPCLSAPWWEEVLYRG++LPAL L++    +V VS VLF+AHHLS+   IPL++LG +WA LY  SGN+LVTI+IHGMWNSRVFLGS LG+
Sbjct:  215 LRPRTQFVVGLGMYIFHLRFLTQYGIAFPVQLIPNDEGWFQSIGLDSLAGM-LSF---AGLVWLRKASVEHSESSTEGATIAVPPLWTGPKGAEAPWSLGSRRKRRRKSDGDEEKVDHPRSSSI-IAMVLLTFGYFSTGRFSLFFENILYAAAGYGFPLTVPMHRSLVVLLGHLAWVVVGSAILAFVLSPKPFFGGGLEPASEGRAKRRPRRWYTNRWDTYWLWWTMGGYFVSAWLFNISDFVNQIVLPPYLFAQQAEGVVSQLINPENNDFMASLVGYIAPCLSAPWWEEVLYRGYLLPALGLFMGFWPSVFVSGVLFSAHHLSVMGAIPLAVLGWLWAALYAKSGNILVTILIHGMWNSRVFLGSWLGL 580          
BLAST of jgi.p|Trimin1|338282 vs. uniprot
Match: W7TRA3_9STRA (Caax amino terminal protease family domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRA3_9STRA)

HSP 1 Score: 299 bits (766), Expect = 1.100e-94
Identity = 171/335 (51.04%), Postives = 220/335 (65.67%), Query Frame = 1
Query:    1 MKPWAQFVVALVLYLFHMFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAGEHLRFGVIVGALLLRREEGKTGKALGGGAAVMRGRSAPWSLDRSLTAKLPLLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVL-----KPFFRTKESKWLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCPLPP-DTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 987
            + P  Q +V + LY FHM VLSK  +PFP QL+PN +GL QS+G+D+LAG      V+  A   RR  G   K +  GA     R  P++  +    K+  +  LL  AY  SG SA  W   ++GL+     L VA+ R++QVL GHLVWVL G  IL         KPFF  K+S W++  W T+WLWW +GGYY SS  F +AD +NQ V P    + +SVV ++INPE ND+ A+ VGS+APC+SAPWWEEVLYRGF+LPAL L+ P  +A  VSAV+FAAHH+S+  MIPL+ LG +WA+LY+LSGNLLV I IH +WNSRVFLGSLLG+
Sbjct:  181 LHPLIQMLVMVALYFFHMLVLSKVAMPFPFQLVPNTHGLFQSIGMDSLAG----LLVLGAAAYFRRARGLPLKPVVFGA-----RPLPFNPPKRGRGKVWRILFLLMVAYLTSG-SASKWVEDVFGLS----ELNVALGRAVQVLAGHLVWVLLGVGILKTQAGEGGDKPFFG-KKSVWMKSSWNTYWLWWAIGGYYVSSLAFHVADTVNQVVLPASAFEVDSVVTQMINPEGNDVVAMLVGSLAPCVSAPWWEEVLYRGFLLPALYLFYPADVATLVSAVIFAAHHMSMSGMIPLTTLGYLWAVLYLLSGNLLVPIAIHSLWNSRVFLGSLLGI 500          
BLAST of jgi.p|Trimin1|338282 vs. uniprot
Match: A0A2V3IW85_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW85_9FLOR)

HSP 1 Score: 297 bits (760), Expect = 2.400e-94
Identity = 166/329 (50.46%), Postives = 217/329 (65.96%), Query Frame = 1
Query:    4 KPWAQFVVALVLYLFHMFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAGEHLRFGVIVGALLLRREEGKTGKALGGGAAVMRGRSAPWSLDRSLTAKLPLLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVLKPFFRTKESKWLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCPLPP-DTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 987
            +PW Q  + L LY FH+F LS     F   LIPN   L QS+G +++AG      V V  LL RR     G++      V+   + PW + R    ++    +LL  AY  SG+ A+  E VLY LA +G+PLTVA  R+ +VLLGHL+WV  G AIL   LKPFF  K + WLR KWR++WLWW +GGYY S+  F +AD+LNQ + P    + E+VV+K+INPE+ D  A+A+GSI PC+SAP +EEVLYRGF+LPAL  +LP   A+P S+VLFA HHL+   ++PLSMLG +WA+LY  S NL VT++IH MWNSRVFLGSLLG+
Sbjct:  126 RPWLQLAILLPLYAFHLFFLSTKGFKFKKPLIPNSKNLFQSIGYESIAGAI----VAVVMLLWRRYILPQGQSQPVLPNVLTVNNPPWKVPRDAKRRIGQTTILLVVAYLLSGYGAVFSEQVLYVLAGSGVPLTVATTRAWKVLLGHLMWVYMGIAILRR-LKPFFPPKGT-WLRWKWRSNWLWWAIGGYYVSAMFFNVADVLNQLLLPASLFEEETVVSKLINPENKDRVAMAIGSIGPCVSAPVFEEVLYRGFLLPALACFLPMWAAIPASSVLFAIHHLNPTMILPLSMLGFIWAILYSKSRNLTVTVLIHAMWNSRVFLGSLLGL 448          
BLAST of jgi.p|Trimin1|338282 vs. uniprot
Match: B8BQQ7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQQ7_THAPS)

HSP 1 Score: 295 bits (754), Expect = 1.430e-92
Identity = 176/373 (47.18%), Postives = 227/373 (60.86%), Query Frame = 1
Query:    1 MKPWAQFVVALVLYLFHMFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAGEHLRFGVIVGALLLRREEGKTGKALGGGAAVM------RGRSAPWSL--------DRSLTAKLP-------LLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVL--KPFF---------RTKESK---------WLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCP---LPPDTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 987
            ++P  QF++ L+LY+FH+ +L++H I FP QLIPND G  QS+GLD++AG  L F    G + LR+       + G   A+         + APW L          + T++ P       +  MLL  AY+ +G  +L +E  LY  A  G PLTVAMHRSL VLLGHL WVL GS IL  VL  KPFF          T  SK         W   KW T+WLWW +GGY+ S++LF +AD +NQ + P        E VV+++INPE+ D  A  VG IAPCLSAPWWEEVLYRG++LPAL L++    +V VS VLF+ HHLS+   IPL++LG  WA LY  SGN+LVT++IHGMWNSRVFLGS LG+
Sbjct:  158 LRPAYQFIIGLLLYIFHLRILTQHGITFPFQLIPNDEGWFQSIGLDSIAGM-LAF---AGLVWLRKASVAHADSSGAKVAIPPIWSDPTEKEAPWKLLPKKKKTGADATTSQQPHPRTTSVVAFMLLTVAYFSTGRFSLLFENGLYAAAGYGFPLTVAMHRSLVVLLGHLTWVLVGSGILAGVLSPKPFFGGGWATKKGNTSNSKKEKTLRPYRWYTNKWDTYWLWWTIGGYFVSAWLFNIADFMNQILLPPQLFAQQAEGVVSQLINPENLDFLASLVGYIAPCLSAPWWEEVLYRGYLLPALRLFMGFWPSVFVSGVLFSVHHLSVMGAIPLAVLGWTWAALYAKSGNILVTMLIHGMWNSRVFLGSWLGL 526          
BLAST of jgi.p|Trimin1|338282 vs. uniprot
Match: A0A7S1XHH8_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XHH8_9RHOD)

HSP 1 Score: 289 bits (739), Expect = 2.650e-92
Identity = 161/330 (48.79%), Postives = 214/330 (64.85%), Query Frame = 1
Query:    1 MKPWAQFVVALVLYLFHMFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAGEHLRFGVIVGALLLRREEGKTGKALGGGAAVMRGRSAPWSLDRSLTAKLPLLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLVWVLAGSAILGNVLKPFFRTKESKWLRIKWRTHWLWWVVGGYYASSFLFTMADLLNQFVCPLPP-DTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEVLYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALLYVLSGNLLVTIMIHGMWNSRVFLGSLLGV 987
            M P  Q  V L LY  H+  +SK   P P QLIPND GL   VGLD++ G ++   V+VG     R+  K G+       +++  + PW + R L   L     +L  +Y  SG+ A+  E VL  L+  G+PLT+   R+ +VLLGHL+WV  G  IL   L PFF  K + WLR KW  +WLWW +GGY  S+ LF  AD++NQF+ P      ESVV K++NPE+ DL A+ +GSI PC+SAP +EEVLYRGF+LPALT + P S+A+PVS+VLFA HHL++  ++PLS+LGL WA++Y  S NL+VTI+IH MWNSRVFL SLLG+
Sbjct:   50 MHPILQLAVLLGLYAIHLLFISKKTFPLPRQLIPNDKGLLNEVGLDSIVG-YIVILVVVGW----RKIMKLGRPF---PNLLQSENPPWKVPRQLKRTLAPTTGILIVSYLASGYGAVFCEQVLCLLSVYGVPLTIPTLRAWKVLLGHLMWVYMGIRILNRRLSPFFPPKGT-WLRWKWNANWLWWSIGGYAVSALLFNCADVVNQFILPSSVFSEESVVNKLVNPENRDLFAMGIGSIGPCMSAPIFEEVLYRGFLLPALTAFFPLSLAIPVSSVLFAIHHLNLSGVLPLSVLGLAWAIIYTQSRNLVVTILIHAMWNSRVFLVSLLGL 370          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|338282 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YJD5_9STRA9.840e-238100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G131_ECTSI4.050e-12358.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0G4G260_VITBC8.400e-11054.23Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S2B7Y7_9STRA2.350e-10663.42Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2WLY0_9STRA8.450e-10050.44Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K0TLB3_THAOC8.770e-9547.44Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
W7TRA3_9STRA1.100e-9451.04Caax amino terminal protease family domain-contain... [more]
A0A2V3IW85_9FLOR2.400e-9450.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
B8BQQ7_THAPS1.430e-9247.18Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S1XHH8_9RHOD2.650e-9248.79Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_90contigContig_90:452218..457153 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|338282|MIX47045_11_48
BRITEko00000
KEGG koko:K07052
DescriptionCAAX protease self-immunity
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsCOG1266@1|root,2QR9S@2759|Eukaryota
Evalue3.94e-124
Seed ortholog2880.D7G131
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionCAAX amino terminal protease
Ec32 orthologEc-27_001320.1
TranscriptId338604
TrackFilteredModels1
ProteinId338282
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|338282gene_11454Tribonema minus UTEX_B_3156 geneContig_90 452218..457153 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|338282Trimin1|338282|MIX47045_11_48Tribonema minus UTEX_B_3156 polypeptideContig_90 452261..457153 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11454_6exon_11454_6Tribonema minus UTEX_B_3156 exonContig_90 452218..452416 -
exon_11454_5exon_11454_5Tribonema minus UTEX_B_3156 exonContig_90 453521..453696 -
exon_11454_4exon_11454_4Tribonema minus UTEX_B_3156 exonContig_90 454532..454676 -
exon_11454_3exon_11454_3Tribonema minus UTEX_B_3156 exonContig_90 455128..455299 -
exon_11454_2exon_11454_2Tribonema minus UTEX_B_3156 exonContig_90 456300..456480 -
exon_11454_1exon_11454_1Tribonema minus UTEX_B_3156 exonContig_90 456994..457153 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_11454UTR3_11454Tribonema minus UTEX_B_3156 three_prime_UTRContig_90 452218..452260 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11454CDS_11454Tribonema minus UTEX_B_3156 CDSContig_90 456994..457153 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11454 ID=mRNA_11454|Name=jgi.p|Trimin1|338282|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1033bp|location=Sequence derived from alignment at Contig_90:452218..457153- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAAACCCTGGGCGCAGTTCGTCGTTGCTCTGGTGCTGTACTTGTTCCA
CATGTTCGTGCTCTCCAAGCACTGCATTCCCTTCCCAGTACAGCTCATAC
CGAACGACTATGGCCTCTGCCAGAGTGTGGGTCTGGATACGCTTGCAGGT
GAGCATTTGCGCTTCGGCGTGATTGTCGGAGCGCTGCTGCTGCGCCGTGA
GGAGGGCAAGACAGGCAAGGCGCTAGGGGGAGGGGCAGCAGTCATGCGCG
GGCGCAGCGCTCCGTGGAGCCTGGACCGCAGCCTCACCGCGAAGCTGCCG
CTGCTGGCAATGCTGCTGGGGTTCGCGTACTACTGCAGCGGATGGTCAGC
GCTCGCGTGGGAATACGTGCTGTATGGTCTGGCGGCGGCGGGGCTGCCGC
TGACGGTGGCCATGCACAGGTCGCTGCAGGTGCTGCTCGGGCACCTCGTG
TGGGTGCTGGCGGGGAGCGCCATCCTGGGGAACGTTCTGAAGCCGTTCTT
CAGAACGAAGGAGAGCAAGTGGCTGCGCATCAAGTGGCGCACGCACTGGC
TGTGGTGGGTGGTGGGGGGGTACTACGCGAGCAGCTTCCTCTTCACCATG
GCGGACCTGCTGAACCAGTTTGTCTGCCCGCTGCCGCCGGACACGGAGAG
CGTTGTCGCCAAGATCATCAACCCCGAGGACAACGACCTGGCGGCGCTGG
CGGTTGGGTCCATTGCGCCGTGCCTGAGCGCGCCGTGGTGGGAGGAGGTG
CTGTACCGCGGCTTCATGCTGCCCGCGCTCACGTTGTACCTGCCGCGCAG
CATGGCGGTGCCCGTGTCGGCAGTGCTCTTTGCGGCGCACCACCTCTCCA
TCCAGGCCATGATCCCCCTCAGCATGCTGGGCCTGGTCTGGGCGCTGCTG
TACGTGCTCAGCGGCAACCTCCTCGTCACCATCATGATACACGGCATGTG
GAACAGCCGCGTTTTCCTGGGGTCCTTGCTGGGGGTCTGAAGGGCCGAGC
CAAGTGCTCGAGACGGAAGGTCTCGAACTGCGC
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protein sequence of jgi.p|Trimin1|338282

>Trimin1|338282|MIX47045_11_48 ID=Trimin1|338282|MIX47045_11_48|Name=jgi.p|Trimin1|338282|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=330bp
MKPWAQFVVALVLYLFHMFVLSKHCIPFPVQLIPNDYGLCQSVGLDTLAG
EHLRFGVIVGALLLRREEGKTGKALGGGAAVMRGRSAPWSLDRSLTAKLP
LLAMLLGFAYYCSGWSALAWEYVLYGLAAAGLPLTVAMHRSLQVLLGHLV
WVLAGSAILGNVLKPFFRTKESKWLRIKWRTHWLWWVVGGYYASSFLFTM
ADLLNQFVCPLPPDTESVVAKIINPEDNDLAALAVGSIAPCLSAPWWEEV
LYRGFMLPALTLYLPRSMAVPVSAVLFAAHHLSIQAMIPLSMLGLVWALL
YVLSGNLLVTIMIHGMWNSRVFLGSLLGV*
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mRNA from alignment at Contig_90:452218..457153-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11454 ID=mRNA_11454|Name=jgi.p|Trimin1|338282|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4936bp|location=Sequence derived from alignment at Contig_90:452218..457153- (Tribonema minus UTEX_B_3156 )
ATGAAACCCTGGGCGCAGTTCGTCGTTGCTCTGGTGCTGTACTTGTTCCA CATGTTCGTGCTCTCCAAGCACTGCATTCCCTTCCCAGTACAGCTCATAC CGAACGACTATGGCCTCTGCCAGAGTGTGGGTCTGGATACGCTTGCAGGT GAGCATTTGCGTGTTGAAGCAGCCGTGGTGTTGCATTTGCAAGTAGCTGC AGAAGACATGCACCTCATTTTTCTGTGCTTGCTCCTGTATTCAATCAGTG CTTCAAGTGCGTGCCGTTCTGTACCAGCACATGTGTAGATGATGAACACA ACGCTGCCTGCAATCGCGAGCCTACATATGCATCGCTCATGCCTATCACC CTGCTCTCACCCAGGACAGCAGCAGTGCTGTGCGCTGTGACACTGCTCGC TGCTGCCATTGCGCAAATTGAGCGCGTTGTGTTGCAGCATACCAGCGCTG ATAGGCTGCGCGGTGCCGTGCCGCAGCCATTGCCGCATCATCGCATCATC AGCTCTCCTGGCCACTAGAGCGAGACATGCTGTCCAATATGTGCACACGC GCTTCAGCACACAGCAGCAGTTGGTGCATTTGCTCTCTGCCTGCTCTCAT GTGCCCATGAGCGTCCTTCCCTGTTGCACCACCAGTATGACAACGAACAC AAGCTTCCATTTGCGCTCCTCAGGCTTCGGCGTGATTGTCGGAGCGCTGC TGCTGCGCCGTGAGGAGGGCAAGACAGGCAAGGCGCTAGGGGGAGGGGCA GCAGTCATGCGCGGGCGCAGCGCTCCGTGGAGCCTGGACCGCAGCCTCAC CGCGAAGCTGCCGCTGCTGGCAATGCTGCTGGGGTTCGCGTACTACTGCA GCGGGTGCGTGGCTGTAACGACATGTGGCAGTGCATTGCTGGCATCTGCG TGGCTGAAGCGGCGCGGTAGCTGTTGGTGGTAGGCGTGCTTGAGCGTGCG GATGCGAGAGCGGCGCCAGCGCGCGGCAGAGTCTGAGTTGAGGGCGGCGC TGCGTTCTGTCTCGCATTGGCACAGTACAGCTGGAGGTGCCTGCACATTG CGGTATCAGGATGGCTGCCTTCTGTGTCCATCGATGCCCTAATCGTGACC CTAGTCCTAACCCTAACCGCGAACTTCTCGGAGGACTGTATTTGTGTGAC GAGTTGCACCAGCACAACGGCTTTCTGGATCATAGCAAGTCTGAAACGAG CACTGCGGAGGTCAAGTTTGACAATGCTGGGGGTTGATGAAGCGATGCTC CGTGTATCCTCAAAGCCACGGCAGCATCAGCGTGCCTGCAGCAGCACGCA TTGTGCTGCCGCAGCGGCGCAGGCACAGGTCTGCCGGCACGCTTTCCAGC AATGGCTGTGCAGACGACCATCGCATGAGGTGTTGCATCATCACTTTAAG TAGCATAATGCTGACGCTTGCTGCTGCGCGTGCTGCGCGCCGCTCCCCGT TCAGATGGTCAGCGCTCGCGTGGGATACCATGCTGTACCACCTGGCAGCA GAACTGCTGGCGCTTACCGTGCCCATGCACCGGGGGAGCATCAGCACTTG AAGTAGCGTCGTGCTGACACTCGCTGCTGCCTGCTGCTCAGGTGGTCAGC GCTCGCATGGGATACTGTGCTGTACGGCCTGACAGCAGAACTGCCGGCGC TGACCGTGCCCTTGCACCGGCGGAGCGTCAACACTTGAAGTAGCGTCATG CTGACGCTCGCTGCTGCGCGCCACTCCCCTCGCAGATGGTCCGCGCTCGC GTGGGAGTACGTGCTGTACGACCTGACGGCACCGGTGCTGCGTCAACACT TGCTTGAAGTATCGTCGTGCTGACGCTCGCTGCTGCGCGTCGCTCCCCAT TCAGATGGTCAGCGCTCGCGTGGGAATACGTGCTGTATGGTCTGGCGGCG GCGGGGCTGCCGCTGACGGTGGCCATGCACAGGTCGCTGCAGGTGCTGCT CGGGCACCTCGTGTGGGTGCTGGCGGGGAGCGCCATCCTGGGGAACGTTC TGAAGCCGTTCTTCAGAACGAAGGAGGTGCGTTTCAGTGCGGCGCTCGTG CGACATCATGAGTCACTGCCGCTGCGCCTTGGGCCCTATGGCCTACCACA TTACATTGATTGCAGGCACTTGTGGTGGTGTCTGCTTGCAGGTGCTTGTA CAGGTTGCATATAGGCGTCGTGTGCCTTGCTGTGTTGAAGTTGAAGAGGC CGCTTGATATGGACTTGACCAATCCTAGCGGAAGTCCCCTGTACGCGACA TGCGCTGCTCACTCTCGACGGCAGCACACGCGCCAGCAAGACAGCGTGTT GTGCACGCAGCAGTTCGGACCGTTGAAACACTAAGCCACACCGTCCACAG CGTCATCTGAGCGCCCACTTCTCTGCTGCACTGTCACATTGAATAGCATG CTTACAATGTGACATGAAGCCTCATGTGTTGTCTCTATGGTGCCCCATGC CCCCCCCCCCCCCCCAACCCTCTACAGAGCAAGTGGCTGCGCATCAAGTG GCGCACGCACTGGCTGTGGTGGGTGGTGGGGGGGTACTACGCGAGCAGCT TCCTCTTCACCATGGCGGACCTGCTGAACCAGTTTGTCTGCCCGCTGCCG CCGGACACGGAGAGCGTTGTCGGTGAGCACTGCTGCACCTGCTGAGCAAT GCCTCAAAGCATAAGCATCCGTTCTGACTGAACCAGTTTGTCTGCCCGCT GCCTCCGGACACGGAGAGCGTTGTTGGTGAACGCTGCTGCATACGCATAA ATATGCAGCCAGCAACACATGCACTAAGTAGCTGCGAGTCTTGTGTCTAC TTCGGTCCCTTGATTGTCCATCTCTGGCACGGAGATGAGCTCTACGCTCA GCGGAGCAATGCTTCGCATCCGTTCTGACAAGCGACTCGGTTTGCTCGTG GACTTGTGCCCAGCGCGGTCGGGCGAGCGCGCGCTGCGGTCTGGTGGAGC AATGCCGCAGTCCCTCATTTGCTGACAGGCCTGAGTAAGCGCGAGCGGGG AGCGCGCGATGCGGTTGCGACTCGTGCAAGCAATGTCGGCAGTAACCGTG CCCCGCTTCCGTACCCGAACGACAGCTGAGATTGGGTATCCTGAGCTTCC AATGACCTGGCAGCACTAGCCAGATAGCGTGTTGCAGCTCCCCCATCATT TCTGGTGGCACGACCACAGCCGCCTCGCCCCCAGAAACCGCATCAACGGG CATCGAGTTGCTGAGCGCGGCGACCATGATGTCCTCCGGTGCCACCCGAT GTGCCGACGCGCGCTGCAGGGGGGAGAGCATGTTGAATGGCGCGCAGCTG ACCTCTGCATTTCCCCGCCCGAGCCTCCCATCCATTATCGCCTCGACAGT ACATATCTCCGTGAAGCAACCGGTCATATGGCAGCCTCAACCGTAACCCT GACACGCAAACAATCACCCCGCGTGCGCCGCCCCCCCCCCCCCCCGTATG CCCGCAGCCAAGATCATCAACCCCGAGGACAACGACCTGGCGGCGCTGGC GGTTGGGTCCATTGCGCCGTGCCTGAGCGCGCCGTGGTGGGAGGAGGTGC TGTACCGCGGCTTCATGCTGCCCGCGCTCACGTTGTACCTGCCGCGCAGC ATGGCGGTGCCCGTGTCGGCAGTGCTCTTTGCGGTGAGTCAATGGGGTAT CACTCTTGATGTGTCGTCCATTCGTTGTTCTAAAGCTGAAGTACGCTGTC AGTGGTGTGAAGGTGCATCACATTCGTGATGGCAGGAGGTGCTGTACCAC GGCTTCATGCTGCCCGCGCTCACGCTGTACCTGCCGCGCAGCATGGCGGT GCCCGTGTCGGCGGTGCTCTTTGCGGTGTGTCAACTGGCTACTACTCTTT GACCACTTTGACCAGTGGTGAGTTCGCATATCAGTGGTTGGAGCATGGAT CACATCATGATGGCAGGAGGTGCTGTATCGTGGCTTCATGCCGCTGTCGG TGGTGCTCCTTGCGGTGAGTCAACTGGCTACTGCTCCTGATGTTCAATTC CTTCTTCAGTTCCTTCTGTAGGCTTAAGGCTGAAGTTCGCAGATCAGTAG TTTGAAGGTGGATTACAGCAGTCGTGATGGCAGGAGGCTCTCTACCGCGG CTTCATGCTGCTGCTCGCGCTCACGCTGTACCTGCCACGTAGCATGGCTG TGCCCGTGTCGGCGATGCTCTTTGTGGTGAGTCAACTGGCTGCTGCTCTT GATGTTCAGTCTGCCTTGAACTTAGGCGGTGAAGTACGCAGATCCGTGGT GTGAAGGTGGATCACGTTCGTGATGGCAGGCGGTGCTGATTGCGGCTTCA TGCTGCTGTCCGCGCCGACGCTGTACCTGTCGCGAGCGCGACTGATAGCT GCCCTTGTATTGGCAATGCTGTCGGCGAGTCCAGTGGGCCTTCGATCTCA TGCTCACAAGGTTGAAGTAGAAGTCTTGCGTGAAGTTCAGTTGGGCACCA AACGCGGTCAGATGCTATGATGCTTGGCACACCGGGTGGCAGCTTCATCA GCACAGCTCAGGATGTAGGGCCTCCCAACGCTTAAAGTTGGCCTTCCTTA GCAGCCAACCACAAACAGCACTGCGCCAAGCGTCACACCAAACGACGTCA GTGCTCTGCGCGATGCTGAGCGGTGCTCAGGGTTGTGCCATGATTGTGCA CCATGGGCCTGCAATTACCACAGCCTGCCTTCTCTGGTTGCTTGTTGACC CCCCCCAAACCCCCCCCCTTCCCCCCCCCCTGCTCAGGCGCACCACCTCT CCATCCAGGCCATGATCCCCCTCAGCATGCTGGGCCTGGTCTGGGCGCTG CTGTACGTGCTCAGCGGCAACCTCCTCGTCACCATCATGATACACGGCAT GTGGAACAGCCGCGTTTTCCTGGGGTCCTTGCTGGGGGTCTGAAGGGCCG AGCCAAGTGCTCGAGACGGAAGGTCTCGAACTGCGC
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Coding sequence (CDS) from alignment at Contig_90:452218..457153-

>mRNA_11454 ID=mRNA_11454|Name=jgi.p|Trimin1|338282|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=990bp|location=Sequence derived from alignment at Contig_90:452218..457153- (Tribonema minus UTEX_B_3156 )
ATGAAACCCTGGGCGCAGTTCGTCGTTGCTCTGGTGCTGTACTTGTTCCA
CATGTTCGTGCTCTCCAAGCACTGCATTCCCTTCCCAGTACAGCTCATAC
CGAACGACTATGGCCTCTGCCAGAGTGTGGGTCTGGATACGCTTGCAGGT
GAGCATTTGCGCTTCGGCGTGATTGTCGGAGCGCTGCTGCTGCGCCGTGA
GGAGGGCAAGACAGGCAAGGCGCTAGGGGGAGGGGCAGCAGTCATGCGCG
GGCGCAGCGCTCCGTGGAGCCTGGACCGCAGCCTCACCGCGAAGCTGCCG
CTGCTGGCAATGCTGCTGGGGTTCGCGTACTACTGCAGCGGATGGTCAGC
GCTCGCGTGGGAATACGTGCTGTATGGTCTGGCGGCGGCGGGGCTGCCGC
TGACGGTGGCCATGCACAGGTCGCTGCAGGTGCTGCTCGGGCACCTCGTG
TGGGTGCTGGCGGGGAGCGCCATCCTGGGGAACGTTCTGAAGCCGTTCTT
CAGAACGAAGGAGAGCAAGTGGCTGCGCATCAAGTGGCGCACGCACTGGC
TGTGGTGGGTGGTGGGGGGGTACTACGCGAGCAGCTTCCTCTTCACCATG
GCGGACCTGCTGAACCAGTTTGTCTGCCCGCTGCCGCCGGACACGGAGAG
CGTTGTCGCCAAGATCATCAACCCCGAGGACAACGACCTGGCGGCGCTGG
CGGTTGGGTCCATTGCGCCGTGCCTGAGCGCGCCGTGGTGGGAGGAGGTG
CTGTACCGCGGCTTCATGCTGCCCGCGCTCACGTTGTACCTGCCGCGCAG
CATGGCGGTGCCCGTGTCGGCAGTGCTCTTTGCGGCGCACCACCTCTCCA
TCCAGGCCATGATCCCCCTCAGCATGCTGGGCCTGGTCTGGGCGCTGCTG
TACGTGCTCAGCGGCAACCTCCTCGTCACCATCATGATACACGGCATGTG
GAACAGCCGCGTTTTCCTGGGGTCCTTGCTGGGGGTCTGA
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