mRNA_11431 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|351430 vs. uniprot
Match: A0A835YKI0_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKI0_9STRA) HSP 1 Score: 2871 bits (7443), Expect = 0.000e+0 Identity = 1895/1895 (100.00%), Postives = 1895/1895 (100.00%), Query Frame = 1
Query: 1 MGNRASAPSGDSKPGSQESAQGVGGGATAATTETQKDNLATAGSELDELRKAFGSIAGASGALDFDALLKVDEVASQLAAGDLCTEDVEAMWLEAVSCPGATSLEPGAEMGPSSWGVRTPLNFRGFLELIRVCEEKTASLGAQPGEVAATYERPVQLVAGAAATQRARWQIAMARQHLAGLMRATLVLHGRGGVASAGGGEADGAAAKALHLXXXXXXXXXXXXXXXXXXXXELLQRAGGSGGGRDDASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVSAQARSLGQQLTRASLHRALKSARSRGELVAQGVLLEQTPTGRALELNIKKDMLKHGLEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVIPKQASPQSAAAEMALLQARLPNSAIXXXXXXXXXXXXXXXXXXXXXXXXSHALAARPDADALSAAHVLLPEDAAGRARMEHQIAGAQVARGLAQRPGVDELKRPNVDGLKDAGVYQDGSAAAKQLEAQMLRDALKHRLEDPQRPTAEALEGQGVRLPEHQGFEHLRAGVQSVAAVXXXXXXXXXXXXXXXXXXXXXXXXVKHGLEGRASLGDVKALGIYLEPEEAQAAAAERKRAAAALQQGCWRAPASRSCRRRALPYAXXXXXXXXXXXXXXXLSASASIAQLQADHTLSPRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXQGIYVTPLDAMRAQLEHSMTCDALSHALAPGGRRPSVESLKAAGIMREGGAAQVALEKAMVADQVAAGLRSRPTPAEAADRGLITADGAPVLDDAEQQKHEAMKRRQDLMAAQVGEQLAKREPLENLSNKGIYMTATPQARGVERAFVTHKLAGALAHRPDQEQLENKGVLMGLESPAQVREQHREARNALEXXXXXXXXXXXXXXXGYLEVDQLXXXXXXXXXXXXXEAWFNEMAEQQQNGSAAAAAPTVPCSAVEACEQVQAMVTAGTTTKEAIAATLQEVDAAGAGRLTFAQFLTFVDAIDVKAEGDVGAEEDGSSGGSSGDGDEASKQQRLANKRARALAAAQAPSLTERLVAHLRARPARDAPDIQRIAHGFRSGAADSLRAALVGQHLAHLLSRREDLDALRRRGVATEQTAAARELEYRLNQRLLDRRLRRRPSADELVRWGVMPQEGQDSVQQRAAAAGVALAQSMADRPACADLEARGILQTEAAQRGGAXXXXXXXXXXAEGLDAEELAARQDALAHQLAARASVRDLKQQGIYLGIYLDETAAVARQLEQQLLRAALKHKLEDPLRPSAADLEAAHILVEAGPAGLSKREMEVMVAARQRVDLRLKWWLKSEFVLGATHMLVAAXXXXXXXXXXXXXXQVKRGLLNRPDLEDLRAQGIYLDTTATQAAHERLLKGALIARGLSKHFNXXXXXXXXXXXXXXEQGGSRLRAEHSIIAAQLSRLMRARPDVEALQEEHPHILXXXXXXXXXXXXXXEANELALAFQDRLSSPDAQTLSFEALRDWPALREALKEADLMHPEXXXXXXXMGSFDSCVTRLLAPRSRTLARATRKCYREGSFDACDAPVRACAPXXXXXXXXADADGAITFSEFLRFVELCDINPEAHIEADDDALAAAFQRLSTAAEGGEGGGGSRVSLAVACEYKRLSVAVDXXXXXXXXXXXXXXXLVQRWAASAALDRKALTELFGNAAGADAASPVQDQAGFVAFCRACQTAAAEAHAYRVQRMRSAASAEGEAARDTLRQTLVKKLQARPDYRELCERHIVLGAAPAAALLERNLIANSIKQQLLARPALDELVRQGILLPSDTAAQHADAAAQLEQRLSMRKDDALWRARPAELGAGHRHAVSEQLSGALSKRASMQELENQGIYLPADATGVAYTLMIDAIIDVQKSFSVSAAALIRHQS 5685
MGNRASAPSGDSKPGSQESAQGVGGGATAATTETQKDNLATAGSELDELRKAFGSIAGASGALDFDALLKVDEVASQLAAGDLCTEDVEAMWLEAVSCPGATSLEPGAEMGPSSWGVRTPLNFRGFLELIRVCEEKTASLGAQPGEVAATYERPVQLVAGAAATQRARWQIAMARQHLAGLMRATLVLHGRGGVASAGGGEADGAAAKALHLXXXXXXXXXXXXXXXXXXXXELLQRAGGSGGGRDDASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVSAQARSLGQQLTRASLHRALKSARSRGELVAQGVLLEQTPTGRALELNIKKDMLKHGLEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVIPKQASPQSAAAEMALLQARLPNSAIXXXXXXXXXXXXXXXXXXXXXXXXSHALAARPDADALSAAHVLLPEDAAGRARMEHQIAGAQVARGLAQRPGVDELKRPNVDGLKDAGVYQDGSAAAKQLEAQMLRDALKHRLEDPQRPTAEALEGQGVRLPEHQGFEHLRAGVQSVAAVXXXXXXXXXXXXXXXXXXXXXXXXVKHGLEGRASLGDVKALGIYLEPEEAQAAAAERKRAAAALQQGCWRAPASRSCRRRALPYAXXXXXXXXXXXXXXXLSASASIAQLQADHTLSPRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXQGIYVTPLDAMRAQLEHSMTCDALSHALAPGGRRPSVESLKAAGIMREGGAAQVALEKAMVADQVAAGLRSRPTPAEAADRGLITADGAPVLDDAEQQKHEAMKRRQDLMAAQVGEQLAKREPLENLSNKGIYMTATPQARGVERAFVTHKLAGALAHRPDQEQLENKGVLMGLESPAQVREQHREARNALEXXXXXXXXXXXXXXXGYLEVDQLXXXXXXXXXXXXXEAWFNEMAEQQQNGSAAAAAPTVPCSAVEACEQVQAMVTAGTTTKEAIAATLQEVDAAGAGRLTFAQFLTFVDAIDVKAEGDVGAEEDGSSGGSSGDGDEASKQQRLANKRARALAAAQAPSLTERLVAHLRARPARDAPDIQRIAHGFRSGAADSLRAALVGQHLAHLLSRREDLDALRRRGVATEQTAAARELEYRLNQRLLDRRLRRRPSADELVRWGVMPQEGQDSVQQRAAAAGVALAQSMADRPACADLEARGILQTEAAQRGGAXXXXXXXXXXAEGLDAEELAARQDALAHQLAARASVRDLKQQGIYLGIYLDETAAVARQLEQQLLRAALKHKLEDPLRPSAADLEAAHILVEAGPAGLSKREMEVMVAARQRVDLRLKWWLKSEFVLGATHMLVAAXXXXXXXXXXXXXXQVKRGLLNRPDLEDLRAQGIYLDTTATQAAHERLLKGALIARGLSKHFNXXXXXXXXXXXXXXEQGGSRLRAEHSIIAAQLSRLMRARPDVEALQEEHPHILXXXXXXXXXXXXXXEANELALAFQDRLSSPDAQTLSFEALRDWPALREALKEADLMHPEXXXXXXXMGSFDSCVTRLLAPRSRTLARATRKCYREGSFDACDAPVRACAPXXXXXXXXADADGAITFSEFLRFVELCDINPEAHIEADDDALAAAFQRLSTAAEGGEGGGGSRVSLAVACEYKRLSVAVDXXXXXXXXXXXXXXXLVQRWAASAALDRKALTELFGNAAGADAASPVQDQAGFVAFCRACQTAAAEAHAYRVQRMRSAASAEGEAARDTLRQTLVKKLQARPDYRELCERHIVLGAAPAAALLERNLIANSIKQQLLARPALDELVRQGILLPSDTAAQHADAAAQLEQRLSMRKDDALWRARPAELGAGHRHAVSEQLSGALSKRASMQELENQGIYLPADATGVAYTLMIDAIIDVQKSFSVSAAALIRHQS
Sbjct: 1 MGNRASAPSGDSKPGSQESAQGVGGGATAATTETQKDNLATAGSELDELRKAFGSIAGASGALDFDALLKVDEVASQLAAGDLCTEDVEAMWLEAVSCPGATSLEPGAEMGPSSWGVRTPLNFRGFLELIRVCEEKTASLGAQPGEVAATYERPVQLVAGAAATQRARWQIAMARQHLAGLMRATLVLHGRGGVASAGGGEADGAAAKALHLXXXXXXXXXXXXXXXXXXXXELLQRAGGSGGGRDDASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVSAQARSLGQQLTRASLHRALKSARSRGELVAQGVLLEQTPTGRALELNIKKDMLKHGLEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVIPKQASPQSAAAEMALLQARLPNSAIXXXXXXXXXXXXXXXXXXXXXXXXSHALAARPDADALSAAHVLLPEDAAGRARMEHQIAGAQVARGLAQRPGVDELKRPNVDGLKDAGVYQDGSAAAKQLEAQMLRDALKHRLEDPQRPTAEALEGQGVRLPEHQGFEHLRAGVQSVAAVXXXXXXXXXXXXXXXXXXXXXXXXVKHGLEGRASLGDVKALGIYLEPEEAQAAAAERKRAAAALQQGCWRAPASRSCRRRALPYAXXXXXXXXXXXXXXXLSASASIAQLQADHTLSPRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXQGIYVTPLDAMRAQLEHSMTCDALSHALAPGGRRPSVESLKAAGIMREGGAAQVALEKAMVADQVAAGLRSRPTPAEAADRGLITADGAPVLDDAEQQKHEAMKRRQDLMAAQVGEQLAKREPLENLSNKGIYMTATPQARGVERAFVTHKLAGALAHRPDQEQLENKGVLMGLESPAQVREQHREARNALEXXXXXXXXXXXXXXXGYLEVDQLXXXXXXXXXXXXXEAWFNEMAEQQQNGSAAAAAPTVPCSAVEACEQVQAMVTAGTTTKEAIAATLQEVDAAGAGRLTFAQFLTFVDAIDVKAEGDVGAEEDGSSGGSSGDGDEASKQQRLANKRARALAAAQAPSLTERLVAHLRARPARDAPDIQRIAHGFRSGAADSLRAALVGQHLAHLLSRREDLDALRRRGVATEQTAAARELEYRLNQRLLDRRLRRRPSADELVRWGVMPQEGQDSVQQRAAAAGVALAQSMADRPACADLEARGILQTEAAQRGGAXXXXXXXXXXAEGLDAEELAARQDALAHQLAARASVRDLKQQGIYLGIYLDETAAVARQLEQQLLRAALKHKLEDPLRPSAADLEAAHILVEAGPAGLSKREMEVMVAARQRVDLRLKWWLKSEFVLGATHMLVAAXXXXXXXXXXXXXXQVKRGLLNRPDLEDLRAQGIYLDTTATQAAHERLLKGALIARGLSKHFNXXXXXXXXXXXXXXEQGGSRLRAEHSIIAAQLSRLMRARPDVEALQEEHPHILXXXXXXXXXXXXXXEANELALAFQDRLSSPDAQTLSFEALRDWPALREALKEADLMHPEXXXXXXXMGSFDSCVTRLLAPRSRTLARATRKCYREGSFDACDAPVRACAPXXXXXXXXADADGAITFSEFLRFVELCDINPEAHIEADDDALAAAFQRLSTAAEGGEGGGGSRVSLAVACEYKRLSVAVDXXXXXXXXXXXXXXXLVQRWAASAALDRKALTELFGNAAGADAASPVQDQAGFVAFCRACQTAAAEAHAYRVQRMRSAASAEGEAARDTLRQTLVKKLQARPDYRELCERHIVLGAAPAAALLERNLIANSIKQQLLARPALDELVRQGILLPSDTAAQHADAAAQLEQRLSMRKDDALWRARPAELGAGHRHAVSEQLSGALSKRASMQELENQGIYLPADATGVAYTLMIDAIIDVQKSFSVSAAALIRHQS 1895
BLAST of jgi.p|Trimin1|351430 vs. uniprot
Match: D8LIW6_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIW6_ECTSI) HSP 1 Score: 353 bits (906), Expect = 1.010e-95 Identity = 361/1141 (31.64%), Postives = 518/1141 (45.40%), Query Frame = 1
Query: 2368 PVLDDAEQQKHEAMKRRQDLMAAQVGEQLAKREPLENLSNKGIYMTATPQARGVERAFVTHKLAGALAHRPDQEQLENKGVLMGLESPAQVREQHREARNALEXXXXXXXXXXXXXXXGYLEVDQLXXXXXXXXXXXXXEAWFNEMAEQQQNGSAAAAAPTVPCSAVEACEQVQAMVTAGTTTKEAIAATLQEV--------------------DAAGAGRLTFAQFLTFVDAIDVKAEGDVGAEEDGSSGGSSGDGDE------ASKQQRLANKRARALAAAQAPS---LTERLVAHLRARPARDAPDIQRIAHGFRSGAADSLRAALVGQHL-AHLLSRR-EDLDALRRRGVATEQTAAARELEYRLNQRLLDRRLRRRPSADELVRWGVMPQEGQDSVQQRAAAAGVALAQSMADRPACADLEARGILQTEAAQRGGAXXXXXXXXXXAEGLDAEELAARQDALAHQLAARASVRDLKQQGIYLGIYLDETAAVARQLEQQLLRAALKHKLEDPLRPSAADLEAAHILVEAGPAGLSKREMEVMVAARQRVDLRLKWWLKSEFVLGATHMLVAAXXXXXXXXXXXXXXQVKRGLLNRPDLEDLRAQGIYLDTTATQAAHERLLKGALIARGLSKHFNXXXXXXXXXXXXXXEQGGSRLRAEHSIIAAQLSRLMRARPDVEALQEEHPHILXXXXXXXXXXXXXXEANELALAFQDRLSSPDAQTLSFEALRDWPALREALKEADLMHPEXXXXXXXMGSFDSCVTRLLAPRSRTLARATRKCYREGS--FDACDAPVRACAPXXXXXXXXADADGAITFSEFLRFVELCDINPEAHIEADDDALAAAFQRLSTAAEGGEGGGGSRVSLAVACEYKRLSVAVDXXXXXXXXXXXXXXXLVQRWAASAALDRKALTELFGNAAG--ADAASPVQDQAGFVAFCRACQTAAAEAHAYRVQRMRSAASAEGEAARDTLRQTLVKKLQARPDYRELCERHIVL--GAAPAAALLERNLIANSIKQQLLARPALDELVRQGILLPSDTAAQHADAAAQLEQRL--SMRKDDALWRARPAELGAGHRHAVSEQLSGALSKRASMQELENQGIYLPADATGVAYTLMIDAIIDVQKSFSVSAAALI 5673
P L+D Q+ HE +RR L+A + E+L KREPLE L+NKGIY+ TP VERA +TH LA LAHRP +L +KGV + +P ++ + HR+ARN LE GYLE D+L +A ++N + + +P S + V+ M+ +GT +E +AA + D A + F FL F+ +D+ +G +GA+ +S G + D D+ A+ +RL +R RA AA+ S L E L+AHLRARP +D P+ QRIA F S A L +L+ L HL SR E A E+TA +ELE +NQR++ L G D +R+ AGV A S A+ EGLD E ++AL L R+S+ +L QGI+ T + LE+QL+ L L +PLRPS DL I ++A P L +ME +A R +K GL R ++DL+ G+Y + +AAHE+LL AL+ R LS F+ XXXXXXXX QL+RL+ RPD L++EHP ++ +A LAL F++R+ P A S KE +++ E + SFD +T + + E + FD CD+ D DG ITFS+FLR+VELCD++P+ H++ D L A + RL EG G G V+L A Y LV+RW ASA+LDR AL ++G AG A + GF +FCR C+ ++ AH R + + + A+ + A++ LR T+ KL ARPD +L E I G PA LERNLIA S+K+QLLARPA+++L ++GI T + +++L + L +MR DDA+WR+ P+EL AG R V+ L +LSKR L N+GIY+ D T +Y L++ ++ + F++S+A LI
Sbjct: 513 PELED--QEHHEGNRRRNALIARGLEEELGKREPLERLANKGIYLEKTPTEGAVERAHLTHTLAHGLAHRPALAELSHKGVYLDGVAPDELEKAHRDARNYLEGTLSLRPTIDTLQDKGYLEADELEEAFTELVLEYKHDA---TATASRENDCGSGSRLLLPGSRLADWAPVRKMLRSGTAMEEDVAAATAKAQKASFHRRGQHXXXXXXXGQDGKDAAMIDFVGFLEFIHTLDIAVDG-LGAD---ASAGKTDDHDDNDPEAAANHARRLEMRRKRATDAAEEDSYGTLKEHLLAHLRARPKKDDPETQRIAKEFHSTEAVDLEKSLLKNRLEGHLRSRAAESAAATSGSSKGGERTARIKELELAMNQRMMKHSL---------------AASGGD---ERSGGAGVGSAPSTAE----------------------------------EGLDME---VAREALGGSLGRRSSLEELTNQGIF-----QRTTPLQHGLERQLIEKRLSRSLRNPLRPSKKDLVEHGIYIDATPREL---QMEHYLATRN----------------------------------------LKHGLERRESIQDLKDHGVYQPENSLRAAHEKLLIKALLQRKLSHAFSREEMDRXXXXXXXXXXXXXXXXXXXXXXTRQLARLVSKRPDPAQLEQEHPELM--------------KAGTLALVFEERVM-PRAAAGSXXXXXXXXXXEAGEKEGEVV-AESGGGPEHLVSFDGLLT-WPDVQDHLVGEGGEDTKHEMARHFDLCDS----------------DGDGYITFSQFLRWVELCDLDPDDHLQVTDSNLDAEYARL----EGASGKWG--VTLDQALSYP----------------------LVKRWVASASLDRDALNAMWGMGAGEGGSAEGNTKQLDGFKSFCRHCEARSSAAHQMRHKELLADAAKKEAKAKEDLRATMAAKLSARPDLDKLKESRIYRSGGLDPAMVHLERNLIAISLKEQLLARPAIEDLEKRGIKPKDGTKVRLDHNSSKLREALDSTMRHDDAIWRSHPSELAAGSRQEVAALLEKSLSKRLEKTVLTNKGIYI--DDTDASYALLVHQVLRAHRGFTLSSAQLI 1478
BLAST of jgi.p|Trimin1|351430 vs. uniprot
Match: A0A6H5L5E6_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E6_9PHAE) HSP 1 Score: 332 bits (851), Expect = 3.160e-91 Identity = 381/1153 (33.04%), Postives = 536/1153 (46.49%), Query Frame = 1
Query: 2368 PVLDDAEQQKHEAMKRRQDLMAAQVGEQLAKREPLENLSNKGIYMTATPQARGVERAFVTHKLAGALAHRPDQEQLENKGVLMGLESPAQVREQHREARNALEXXXXXXXXXXXXXXXGYLEVDQLXXXXXXXXXXXXXEAWFNEMAEQQQNGSAAAAAPT----------VPCSAVEACEQVQAMVTAGTTTKEAIAATL------------QEVDAAGAG--------RLTFAQFLTFVDAIDVKAEGDVGAEEDGSSGGSSGDGDE------ASKQQRLANKRARALAAAQAPS---LTERLVAHLRARPARDAPDIQRIAHGFRSGAADSLRAALVGQHL-AHLLSRREDLDALRRRGVATEQTAAARELEYRLNQRLLDRRLRRRPSADELVRWGVMPQEGQDSVQQRAAAAGVALAQSMADRPACADLEARGILQTEAAQRGGAXXXXXXXXXXAEGLDAEELAARQDALAHQLAARASVRDLKQQGIYLGIYLDETAAVARQLEQQLLRAALKHKLEDPLRPSAADLEAAHILVEAGPAGLSKREMEVMVAARQRVDLRLKWWLKSEFVLGATHMLVAAXXXXXXXXXXXXXXQVKRGLLNRPDLEDLRAQGIYLDTTATQAAHERLLKGALIARGLSKHFNXXXXXXXXXXXXXXEQGGSRLRAEHSIIAAQLSRLMRARPDVEALQEEHPHILXXXXXXXXXXXXXXEANELALAFQDRLSSPDAQTLSFEALRDWPALREALKEADLMHPEXXXXXXXMGSFDSCVTRLLAPRSRTLARATRKCYREGS--FDACDAPVRACAPXXXXXXXXADADGAITFSEFLRFVELCDINPEAHIEADD---DALAAAFQRLSTAAEGGEGGGGSRVSLAVACEYKRLSVAVDXXXXXXXXXXXXXXXLVQRWAASAALDRKALTELFGNAA--GADAASPVQDQAGFVAFCRACQTAAAEAHAYRVQRMRSAASAEGEAARDTLRQTLVKKLQARPDYRELCERHIVL--GAAPAAALLERNLIANSIKQQLLARPALDELVRQGILLPSDTAAQHADAAAQLEQRL--SMRKDDALWRARPAELGAGHRHAVSEQLSGALSKRASMQELENQGIYLPADATGVAYTLMIDAIIDVQKSFSVSAAALI 5673
P L+D Q+ HE +RR L+A ++ E+L KREPLE L+NKGIY+ TP VERA +TH LA LAHRP +L +KG + +P ++ + HR+ARN LE L XXXXXXXXXXXXX F E+ + ++ + AAA+ +P S + V+ M+ +GT +E +AA Q V AAG G + F FL F+ +D+ +G +GAE +S G + D D+ A +RL +R RA AA+ S L E L+AHL+ARP +D P+ QRIA F S A L +L+ L HL SR + R +G E+TA +ELE +NQR+L L G D +R AGV A + A+ EGLD E ++AL L R+S+ +L QGI+ T + LE+QL+ L L +PLRPS DL I ++A P L +ME +A R +K GL R ++DL+ G+Y + AAHE+LL AL+ R LS F+ XXXXXXXXXXXX QL+RL+ RPD L++EHP ++ +A LAL F++R+ P A S KE +++ E + SFD +T + E + FD CD+ D DG ITFS+FLR+VELCD++P+ H++A D L A + RL EG G GG ++L A Y LV+RWAASA+LDR AL ++G A G A + GF +FCR C+ ++ AH R + + + A+ + A++ LR + KL ARPD +L E I G PA LERNLIA S+K+QLLARPA+++L ++GI T + +++L + L +MR DDA+WR+ P+EL AG R VS L +LSKR L N+GIY+ D T +Y L++ ++ + F++S+A LI
Sbjct: 63 PDLED--QEHHEGNRRRNALIARELEEELGKREPLERLANKGIYLEKTPTEGAVERAHLTHTLAHGLAHRPALAELSHKGGV----APDELEKAHRDARNYLEGTLS-------------LXXXXXXXXXXXXXXXXXXXXAFTELVLEYKHDATAAASTEDDCGSGSRLLLPASRLADWAPVRKMLRSGTAMEEDVAAATAKAQKASFHRRGQHVQAAGGGGQDGKDAAMIDFVGFLEFIHTLDIAVDG-LGAE---ASVGKTDDHDDNDPEAAAKHARRLEMRRKRATHAAEEDSYGTLKEHLLAHLKARPKKDDPETQRIAKEFHSTEAVDLEKSLLKNRLEGHLRSRAAESAVGRSKG--GERTARIKELELAMNQRMLKHSL---------------AASGGD---ERRGGAGVGSAAATAE----------------------------------EGLDME---VTREALGGSLGRRSSLEELTNQGIF-----QRTTPLQHGLERQLIEQRLSRSLRNPLRPSKKDLVEHGIYIDATPREL---QMEHYLATRN----------------------------------------LKHGLERRESIQDLKDHGVYQAENSLSAAHEKLLIKALLQRKLSHAFSREXXXXXXXXXXXXXXXXXXXXXXXXXXTRQLARLVSKRPDPAQLEQEHPELM--------------KAGTLALVFEERVM-PRAAAGSXXXXXXXTVAEAGEKEGEVV-AESEGGPEHLVSFDGLLT-WPDVQDHLAGEGGEDTKHEMARHFDLCDS----------------DGDGYITFSQFLRWVELCDLDPDDHLQAGDVTDSNLDAEYARL----EGASGKGG--ITLDQALSYP----------------------LVKRWAASASLDRDALEAMWGIGASEGGSAEENTKQLDGFKSFCRHCEARSSAAHQMRHKELLADAAKKEAKAKEDLRAKMAAKLSARPDLDKLKESRIYRSGGLDPAVVHLERNLIAISLKEQLLARPAIEDLEKRGIKPKDGTKVRLDHNSSKLREALDSTMRHDDAVWRSHPSELVAGSRQEVSALLEKSLSKRLEKTLLTNKGIYI--DDTDASYALLVHQVLRAHRGFTLSSAQLI 1024 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351430 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11431 ID=mRNA_11431|Name=jgi.p|Trimin1|351430|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5825bp|location=Sequence derived from alignment at Contig_90:265723..288625+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGGGAATCGAGCTTCGGCTCCGTCTGGCGATTCGAAGCCCGGCAGTCAback to top protein sequence of jgi.p|Trimin1|351430 >Trimin1|351430|estExt_Genemark1.C_Ctg_900036 ID=Trimin1|351430|estExt_Genemark1.C_Ctg_900036|Name=jgi.p|Trimin1|351430|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1896bp MGNRASAPSGDSKPGSQESAQGVGGGATAATTETQKDNLATAGSELDELRback to top mRNA from alignment at Contig_90:265723..288625+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11431 ID=mRNA_11431|Name=jgi.p|Trimin1|351430|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=22903bp|location=Sequence derived from alignment at Contig_90:265723..288625+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_90:265723..288625+ >mRNA_11431 ID=mRNA_11431|Name=jgi.p|Trimin1|351430|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=5688bp|location=Sequence derived from alignment at Contig_90:265723..288625+ (Tribonema minus UTEX_B_3156 )back to top |