mRNA_11404 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|351415 vs. uniprot
Match: A0A836C802_9STRA (Pyr_redox_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C802_9STRA) HSP 1 Score: 499 bits (1284), Expect = 2.060e-175 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 3 Query: 366 MEALFKERQDAIAAAERILIIGGGPVGMETAGEIAAHYGTTKQVTLVAAKGLMEDPNTPFSDKFKTAIKSKLESVGVTVAVNAGHVDLSQATTNDAGLIVGPATYKWQSGEGEFDLAIPCIGSRIVPPLIAASGWEDKLDGGSLKVNSNLQVDGCDGSVFALGDIAALKETKLAYYAGIQAALTAQNIKAAEAGKPLKAYTLHTQATSMVPVGPNLGAAEMSGMLMGNFPVKMLKGKALFVPPTWAGVGASAALAALK 1139 MEALFKERQDAIAAAERILIIGGGPVGMETAGEIAAHYGTTKQVTLVAAKGLMEDPNTPFSDKFKTAIKSKLESVGVTVAVNAGHVDLSQATTNDAGLIVGPATYKWQSGEGEFDLAIPCIGSRIVPPLIAASGWEDKLDGGSLKVNSNLQVDGCDGSVFALGDIAALKETKLAYYAGIQAALTAQNIKAAEAGKPLKAYTLHTQATSMVPVGPNLGAAEMSGMLMGNFPVKMLKGKALFVPPTWAGVGASAALAALK Sbjct: 1 MEALFKERQDAIAAAERILIIGGGPVGMETAGEIAAHYGTTKQVTLVAAKGLMEDPNTPFSDKFKTAIKSKLESVGVTVAVNAGHVDLSQATTNDAGLIVGPATYKWQSGEGEFDLAIPCIGSRIVPPLIAASGWEDKLDGGSLKVNSNLQVDGCDGSVFALGDIAALKETKLAYYAGIQAALTAQNIKAAEAGKPLKAYTLHTQATSMVPVGPNLGAAEMSGMLMGNFPVKMLKGKALFVPPTWAGVGASAALAALK 258
BLAST of jgi.p|Trimin1|351415 vs. uniprot
Match: A0A835Z0G8_9STRA (Pyr_redox_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0G8_9STRA) HSP 1 Score: 375 bits (964), Expect = 1.930e-123 Identity = 208/375 (55.47%), Postives = 268/375 (71.47%), Query Frame = 3 Query: 18 VAVIGGGYAGTAVAKALDATSNVTLVAKQSCLVHNIAGLRGSVVPGFQKKCLIPLDNLLTRGKLITGVEATKVDSAAKTVTLSSGESLQYDYLVIATGSLGPKTFGAANTTTDVAAMEALFKERQDAIAAAERILIIGGGPVGMETAGEIAAHYGTTKQVTLVAAKGLMEDPNTPFSDKFKTAIKSKLESVGVTVAVNAGHVDLSQATTNDAGLIVGPATYKWQSGEG----EFDLAIPCIGSRIVPPLIAASGWEDKLDGGSLKVNSNLQVDGCD-GSVFALGDIAALKETKLAYYAGIQAALTAQNIKAAEAGKPLKAYTLHTQATSMVPVGPNLGAAEMSGMLMGNFPVKMLKGKALFVPPTWAGVGASAAL 1127 V VIGGGYAG A A+ALD+ NVTLVA+Q LVH+ AG+R VV G++ + IPL LL+RG L++GVEATKVD AKTVTLS+GE L+YDYL+IA G+LGPKT GAA T T ++A+FK RQ AIA+A+RIL+IGGG +E A EI AH+G K+V LV A+GLMEDP FSD K + L + GVT+ +NAG + L + ++ G IVG +TY+ SG+G EFDLAIPC+G+R PP IAASGW DKLDG +KV++ LQV+GC G+VFA+GDIA LKE+KLAY+A QA L A+NI+A G+ L+ Y +HT+ T ++P+GP+ GA + +G LMG+F K K+LFVP W GA A L Sbjct: 107 VVVIGGGYAGAAAARALDSNFNVTLVARQQRLVHDAAGVRAGVVAGWETRVAIPLSGLLSRGNLLSGVEATKVDENAKTVTLSNGEQLKYDYLIIAAGTLGPKTVGAAVTPTAADGIDAVFKARQAAIASAKRILVIGGGATSIEQAAEIVAHHGKAKEVVLVTAEGLMEDPFIAFSDSLKAMLHKMLAAQGVTIHLNAGFITLDREA-DENGFIVGTSTYRL-SGDGKLSGEFDLAIPCLGTRKTPPFIAASGWLDKLDGVFIKVDTTLQVEGCPAGTVFAIGDIANLKESKLAYFALQQAKLVARNIEALATGQALEKYRVHTKPTLLLPLGPHHGAGQFNGWLMGDFASTAYKSKSLFVPKMWHLFGAKAEL 479
BLAST of jgi.p|Trimin1|351415 vs. uniprot
Match: A0A6H5KYH0_9PHAE (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH0_9PHAE) HSP 1 Score: 260 bits (664), Expect = 8.420e-80 Identity = 164/377 (43.50%), Postives = 217/377 (57.56%), Query Frame = 3 Query: 18 VAVIGGGYAGTAVAKALDATSNVTLVAKQSCLVHNIAGLRGSVVPGFQKKCLIPLDNLLTRGKLITGVEATKVDSAAKTVTLSSGESLQYDYLVIATGSLGPKTFGAANTTTDVAAMEALFKERQDAIAAAERILIIGGGPVGMETAGEIAAHYGTTKQVTLVAAKGLMEDPNTPFSDKFKTAIKSKLESVGVTVAVNAGHVDLSQATTNDAGLIVGPATYKWQSGEGEFDLAIPCIGSRIVPPLIAASGWEDKLDG-GSLKVNSNLQVDGCDGS--VFALGDIAALKETKLAYYAGIQAALTAQNIKAAEAGKPLKAYTLHTQATSMVPVGPNLGAAEMS-GMLMGNFPVKMLKGKALFVPPTWAGVGASAALAAL 1136 V VIGGGYAG AK LDA NVTLV H + GLR SV+P + LIP N L+ G + T +AT++++ TVTLS+GESL YD+LV+ATG L P T G N T VA A+FK+ + AA+ IL+IGGGP+G+E AGEI K VTLV +K LM P F KF+T ++ KLE+VGVTV + G V+ S+ + G I G TY W G+ E DL I C G+ P+ A SG LD G +KVN +V GS VFA+GD L K+AY AG + A+ + A+ AGKPLK+ S+VPVG G + + G+++G+F + +K K +FV W + A A AA+ Sbjct: 5 VVVIGGGYAGVEAAKGLDAKFNVTLVTGGDAFRHIVYGLRASVLPDQTPRMLIPYANCLSNGTVKT-CKATRINADECTVTLSTGESLPYDFLVLATGFLHPNTVGVGNNTGTVAGQTAVFKQAHATLKAAKSILVIGGGPIGIEIAGEIKEEM-PGKSVTLVTSKELMPSPTVAFPAKFRTRLRKKLEAVGVTVHTDGGRVNFSRDDIDACGFISGEKTYSWTGGQLEADLCIVCTGATQAAPIYADSGLHHWLDERGQVKVNDTFEVIEAPGSGKVFAVGDCMDLPVPKIAYLAGAEGDSVAKQVAASAAGKPLKSAAPSVMPVSLVPVGKTGGVSSLPMGIVVGDFMTRNIKSKDMFVSKYWTILNAGKAPAAI 379
BLAST of jgi.p|Trimin1|351415 vs. uniprot
Match: D7FVU6_ECTSI (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU6_ECTSI) HSP 1 Score: 239 bits (611), Expect = 1.640e-70 Identity = 160/377 (42.44%), Postives = 212/377 (56.23%), Query Frame = 3 Query: 18 VAVIGGGYAGTAVAKALDATSNVTLVAKQSCLVHNIAGLRGSVVPGFQKKCLIPLDNLLTRGKLITGVEATKVDSAAKTVTLSSGESLQYDYLVIATGSLGPKTFGAANTTTDVAAMEALFKERQDAIAAAERILIIGGGPVGMETAGEIAAHYGTTKQVTLVAAKGLMEDPNTPFSDKFKTAIKSKLESVGVTVAVNAGHVDLSQATTNDAGLIVGPATYKWQSGEGEFDLAIPCIGSRIVPPLIAASGWEDKLDG-GSLKVNSNLQVDGCDGS--VFALGDIAALKETKLAYYAGIQAALTAQNIKAAEAGKPLKAYTLHTQATSMVPVGPNLGAAEMS-GMLMGNFPVKMLKGKALFVPPTWAGVGASAALAAL 1136 V VIGGGYAG AKALDA +VTLVA H + GLR SV+P + L+P N L+ G + T +AT++++ TVTLS+GESL YD+LV+ATG L P T G N T VA A+FK+ + AA+ IL+IGGGP+G+E AGEI K VTLV +K LM + F K E VGVTV + G V+ S+ + G I G TY W G+ E DL I C G+ P+ A SG LD G +KVN +V GS VFA+GD L K+AY AG + A+ + A+ AGKPLK+ S+VPVG G + + G+++G+F + +K K +FV WA + A A AA+ Sbjct: 126 VVVIGGGYAGVEAAKALDAKFDVTLVAGGDAFRHIVYGLRASVLPDQTPRMLVPYANFLSNGTVKT-CKATRINADECTVTLSTGESLPYDFLVLATGFLHPNTVGVGNNTGTVAEQTAVFKQANATLKAAKSILVIGGGPIGIEMAGEIMEEM-PGKSVTLVTSKELMPLAHRGFPGKVP---HPPAEEVGVTVHTDGGRVNFSRDDIDACGFISGEKTYSWTGGQVEADLCIVCTGATQAAPIYADSGLHHWLDERGQVKVNDTFEVIEAPGSGKVFAVGDCMDLPVPKIAYLAGAEGDSVAKQVAASAAGKPLKSAAPSVMPVSLVPVGKTGGVSSLPMGIVVGDFMTRNMKSKDMFVSKYWAILKAGRAPAAI 497
BLAST of jgi.p|Trimin1|351415 vs. uniprot
Match: A0A6P8HVF7_ACTTE (apoptosis-inducing factor 2-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HVF7_ACTTE) HSP 1 Score: 184 bits (466), Expect = 1.910e-50 Identity = 134/365 (36.71%), Postives = 189/365 (51.78%), Query Frame = 3 Query: 18 VAVIGGGYAGTAVAKALDATSNVTLVAKQSCLVHNIAGLRGSVVPGFQKKCLIPLDNLLTRGKLITGVEATKVDSAAKTVTLSSGESLQYDYLVIATGSLGPKTFGAANTTTDVAAMEALFKERQDAIAAAERILIIGGGPVGMETAGEIAAHYGTTKQVTLVAAKGLMEDPNTPFSDKFKTAIKSKLESVGVTVAVNAGHVDLSQATTNDAGLIVGPATYKWQSGEG-EFDLAIPCIGSRIVPPLIAASGWEDKLDG--GSLKVNSNLQVDGCDGSVFALGDIAALKETKLAYYAGIQAALTAQNIKAAEAGKPLKAYTLHTQATSMVPVGPNLGAAEM-SGMLMGNFPVKMLKGKALFVPPTW 1100 V ++GGG+ G A LD+ VTL+ + +N+A LRG V P F KK LIP +N L G I + V + K VTLS G+ +QYDYL+ A GS P G + L+++ + +++I IIGGGPVG+E AGEIA Y KQVT++ ++ + D S+KF + S ++S+ +T + + GP T G E DL + C G ++ S DK+D G+LKVN LQV+ D VFA+GD E KLAY AG+Q L A NIK K LK + L ++ +VP+G N G +++ +G +MG+F K LKGK LF W Sbjct: 14 VVIVGGGFGGINAAVQLDSYCQVTLIDPKDAFHNNVAALRGVVEPSFIKKTLIPYENALQHGTFIKA-KCVSVHLSLKKVTLSDGQEIQYDYLIFACGSSNPFP-GKVPLGMSKDDAQKLYEDLAKEVKNSKKIAIIGGGPVGVEMAGEIACDY-PDKQVTIIHSRDRLIDER--MSEKFLKKVHSAVKSMKITTVLGEKVAMEELNFDGQKSWVSGPITLTTDKGTSIEADLVLRCTGFKVNADAYR-SKLSDKMDHNTGTLKVNKYLQVEEMD-DVFAVGDCNNTDEMKLAYVAGVQGELVAFNIKQLNENKKLKEHKL-SRPMMVVPIGXNNGVSQLPNGSVMGSFVTKTLKGKNLFTAKYW 370
BLAST of jgi.p|Trimin1|351415 vs. uniprot
Match: UPI0001CBC1AA (apoptosis-inducing factor 2-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBC1AA) HSP 1 Score: 179 bits (453), Expect = 1.680e-48 Identity = 136/375 (36.27%), Postives = 195/375 (52.00%), Query Frame = 3 Query: 3 PVNKAVAVIGGGYAGTAVAKALDATSNVTLVAKQSCLVHNIAGLRGSVVPGFQKKCLIPLDNLLTRGKLITGVEATKVDSAAKTVTLSSGESLQYDYLVIATGSLGPKTFGAANTTTDVAAMEA---LFKERQDAIAAAERILIIGGGPVGMETAGEIAAHYGTTKQVTLVAAKGLMEDPNTPFSDKFKTAIKSKLESVGVTVAVNAGHVDLSQATTNDAGLIVGPATYKWQSG-EGEFDLAIPCIGSRIVPPLIAASGWEDKLD-GGSLKVNSNLQVDGCDGSVFALGDIAALKETKLAYYAGIQAALTAQNIKAAEAGKPLKAYTLHTQATSMVPVGPNLGAAEMSGMLMGNFPVKMLKGKALFVPPTWAGVG 1112 P N ++GGGY GT +A L NV L+ + HN+A LR +V PGF K LIP T G + T +++ +V L +GE + + +L IATGS GP F + ++E ++ D I A+ I+++GGG VG+E AGEIA Y K+VTLV + DP T +D+F+ IKS+L+ +GV V + +LS+ + T K +G E DL +PC G R +G DK+D G LKVN QV+G +++A GD A + ETKLAY AG+ A A+N++ AGK L AY +M G N G +M G ++G+F + LK +FVP W +G Sbjct: 12 PENMNAVIVGGGYGGTQMANNLKGRCNVILIDPKDAFHHNMAALRAAVEPGFAPKTLIPYQK--TYGDVFKRGLVTSINTDENSVVLDTGEKVPFTHLFIATGSRGP--FPGKLVSPPKVSLEKGVEMYSNIADQIKNAKDIVVVGGGAVGVELAGEIATDY-KDKKVTLVHPHQRLADPKT--NDQFQDQIKSQLKDLGVNVLLGERVSNLSELPACQTMSTLN--TVKTDTGKEIGADLVVPCTGLRTNTSAYE-NGLADKMDKDGCLKVNEYFQVEGTK-NIYAFGDCANVAETKLAYNAGVHADKIAKNLENEAAGKQLAAYKPANFFMAMS-CGRNGGMMQMGGWVVGSFVARRLKSGQVFVPMVWKKMG 374
BLAST of jgi.p|Trimin1|351415 vs. uniprot
Match: UPI000644F034 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644F034) HSP 1 Score: 176 bits (447), Expect = 1.750e-47 Identity = 127/374 (33.96%), Postives = 198/374 (52.94%), Query Frame = 3 Query: 9 NKAVAVIGGGYAGTAVAKALDATSNVTLVAKQSCLVHNIAGLRGSVVPGFQKKCLIPLDNLLTRGKLITGVEATKVDSAAKTVTLSSGESLQYDYLVIATGSLGPKTFGAANTTTDVAAMEALFKERQDAIAAAERILIIGGGPVGMETAGEIAAHYGTTKQVTLVAAKGLMEDPNTPFSDKFKTAIKSKLESVGVTVAVNAG-----HVDLSQATTNDAGLIVGPATYKWQSGEGEFDLAIPCIGSRIVPPLIAASGWEDKLDGGSLKVNSNLQVDGCDGSVFALGDIAALKETKLAYYAGIQAALTAQNIKAAEAGKPLKAYTLHTQATSMVPVGPNLGAAEMSG-MLMGNFPVKMLKGKALFVPPTWAGVG 1112 K V ++GGG G +A+ LD +VT+V K++ +N+A LR V P K+C + D +L GK++ AT + +A+ V + +G+ L +DYLVIATGS F A D++ + + ++ + A ++LI+GGGPVG+E AGEI + K VTL+ + P KF + KL+ +G+ V +N ++ S + + G V TY+ +GE E DL C+G++I L+ + + G +KVN +LQV+G D +VFA+GDI KE K Y A AA+ N+KA E+ K L Y + V VG N G A+ +G ++ F VKM+K + LF+ + +G Sbjct: 30 RKKVVIVGGGLGGIFLARQLDKDFDVTVVEKKTAFFYNVAALRCIVEPDMTKQCFLSYDKMLKNGKVVHHA-ATAI--SAQKVVMDNGDELAFDYLVIATGSNNMTPFKAP---ADLSHAYQYYVDIREKVKTATKVLIVGGGPVGVELAGEIKTEF-KGKNVTLIQRSDKLVGPQ--MGKKFADKMHDKLKGMGINVMLNTSLDVPDNIKQSLSEQSQLGYNVEMRTYQTSNGEVEADLVFWCVGNKINNELLQENFGGALDEHGHIKVNEHLQVEGHD-NVFAIGDITNTKELKTYYNAKYHAAIICTNLKACESKKKLAVYK-PSGPLIFVSVGKNDGLAQTAGGTVIPGFVVKMVKSRGLFISMVQSSLG 392
BLAST of jgi.p|Trimin1|351415 vs. uniprot
Match: A0A8J9Z039_BRALA (AIFM2 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9Z039_BRALA) HSP 1 Score: 176 bits (445), Expect = 6.290e-47 Identity = 136/370 (36.76%), Postives = 190/370 (51.35%), Query Frame = 3 Query: 18 VAVIGGGYAGTAVAKALDATSNVTLVAKQSCLVHNIAGLRGSVVPGFQKKCLIPLDNLLTRGKLITGVEATKVDSAAKTVTLSSGESLQYDYLVIATGSLGP---KTFGAANTTTDVAAM-EALFKERQDAIAAAERILIIGGGPVGMETAGEIAAHYGTTKQVTLVAAKGLMEDPNTPFSDKFKTAIKSKLESVGVTVAVNAGHVDLSQATTNDAGLIVGPATYKWQSG-EGEFDLAIPCIGSRIVPPLIAASGWEDKLDGGSLKVNSNLQVDGCDGSVFALGDIAALKETKLAYYAGIQAALTAQNIKAAEAGKPLKAYTLHTQATSMVPVGPNLGAAEMSGMLMGNFPVKMLKGKALFVPPTWAGVG 1112 V ++GGGYAG +A+ L + TL+ + L HN+ +R PGF KK LIP T G+ T +D+A KTV L+SGE+++Y +LV+ATGS GP K TT +V EA+ K Q AA+ I+I+GGG VG E AGEIA Y K+VTL+ + + N SD F+ +K L+ +GV + + +L Q T+ V T G E DL IPC G ++ S D GSLKVN+ +V G +G ++A+GD + ETK+AY AG+ A L A+NI A E G K Y +V VG G + L+ F V+MLK + + W +G Sbjct: 64 VVIVGGGYAGMQLARNLKNKARFTLIDPKEMLYHNVGAVRSCTEPGFAKKILIPYAP--TFGENFKQGAVTGIDAAGKTVLLASGETVKYSHLVLATGSTGPFPGKPPDGMTTTAEVTEKSEAVLKLVQ----AAKNIVIVGGGAVGTEIAGEIATDY-KDKEVTLIHPRDKLV--NGESSDAFQKRLKEILQGLGVKLVLGERVTNLDQLPTDR----VENVTVVTDKGTEISADLVIPCTGLKVNSMAYKDSLASSMEDNGSLKVNNFFEVQGTEG-IYAIGDCTNIPETKMAYRAGMHADLLAKNILAQETGGTRKEYK-PDPFIMVVSVGRKAGLGQKGTSLLPEFVVRMLKARDMMTGRYWKEMG 418
BLAST of jgi.p|Trimin1|351415 vs. uniprot
Match: A7RTD8_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RTD8_NEMVE) HSP 1 Score: 173 bits (439), Expect = 1.530e-46 Identity = 140/365 (38.36%), Postives = 191/365 (52.33%), Query Frame = 3 Query: 18 VAVIGGGYAGTAVAKALDATSNVTLVAKQSCLVHNIAGLRGSVVPGFQKKCLIPLDNLLTRGKLITGVEATKVDSAAKTVTLSSGESLQYDYLVIATGSLGPKTFGAANTTTDVAAMEALFKERQDAIAAAERILIIGGGPVGMETAGEIAAHYGTTKQVTLVAAKGLMEDPNTPFSDKFKTAIKSKLESVGVTVAVNAGHVDLSQATTNDAGLIVGPATYKWQSGEG-EFDLAIPCIGSRIVPPLIAASGWEDKLDG--GSLKVNSNLQVDGCDGSVFALGDIAALKETKLAYYAGIQAALTAQNIKAAEAGKPLKAYTLHTQATSMVPVGPNLGAAEM-SGMLMGNFPVKMLKGKALFVPPTW 1100 V ++GGGYAG +A LD NVTL+ + C H+I LR V PGF KK LIP L G I + V + +TVTLS+G+ L YDYLV A GS P T A + L++E + +E+I+IIGGGPVG+E AGEIA Y +K+VT+V AK + + S+KF+ I L+ + V + + + + + + GP T G E DL C G ++ S DK+D GSLKV++ LQV+ VFA+GD E KLAY A +QA A NIK K +K Y L A +VP+G N GAA++ +GM+ GN K +KGK + W Sbjct: 14 VIIVGGGYAGITLAGKLDDYCNVTLIDPKDCFHHSIGALRCVVEPGFIKKTLIPYKGFLKYGTFIQA-KCVSVHVSLRTVTLSNGQELSYDYLVFACGSSVPFPGKVPQGVTREDAHK-LYEELALQVKNSEKIVIIGGGPVGVELAGEIANDY-PSKKVTIVNAKEQLI--SNKMSEKFQKKINKGLKDLKVNLVLGE-KIAMDELDP----WVQGPITITTDKGTSIEADLVFRCTGFKVNADAYR-SKLSDKMDHNTGSLKVDAFLQVEEMR-DVFAIGDCNNTPEIKLAYGATLQAETVAFNIKQLNESKRMKEYKL-LNALMVVPMGRNRGAAQLPNGMVFGNMFAKGIKGKDMMTGKIW 365
BLAST of jgi.p|Trimin1|351415 vs. uniprot
Match: A0A6P4ZLM1_BRABE (apoptosis-inducing factor 2-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4ZLM1_BRABE) HSP 1 Score: 170 bits (431), Expect = 2.240e-45 Identity = 126/366 (34.43%), Postives = 187/366 (51.09%), Query Frame = 3 Query: 18 VAVIGGGYAGTAVAKALDATSNVTLVAKQSCLVHNIAGLRGSVVPGFQKKCLIPLDNLLTRGKLITGVEATKVDSAAKTVTLSSGESLQYDYLVIATGSLGPKTFGAANTTTDVAAMEALFKERQDAIAAAERILIIGGGPVGMETAGEIAAHYGTTKQVTLVAAKGLMEDPNTPFSDKFKTAIKSKLESVGVTVAVNAGHVDLSQATTNDAGLIVGPATYKWQSG-EGEFDLAIPCIGSRIVPPLIAASGWEDKLDGGSLKVNSNLQVDGCDGSVFALGDIAALKETKLAYYAGIQAALTAQNIKAAEAGKPLKAYTLHTQATSMVPVGPNLGAAEMSGMLMGNFPVKMLKGKALFVPPTWAGVG 1112 V ++GGGYAG +AK L + VTL+ + L HNI +R PGF K+ L+P T G+ T +++A KTV L+SGE+++Y +LV+ATGS GP + + T +A + + + AA+ I+IIGGG VG E AGEIA Y K+VTL+ + + SD F+ +K L+ +GV + + +L T+ V AT G E DL IPC G ++ S D GSLKVN+ +V G +G ++A+GD + + ETK+AY A + + L A+NI A E G K Y +V VG + L+ F V+M+K + + W +G Sbjct: 15 VVIVGGGYAGIQLAKNLQKKARVTLIDPKEMLYHNIGAVRSCTEPGFAKRILMPYAP--TFGQNFKQGTVTAINAAEKTVVLASGETVKYSHLVLATGSTGPFPGKSPDELTSIAEVTEKSEAVLKLVQAAKNIVIIGGGAVGTEIAGEIATDY-KDKEVTLIHPHDKLVSGES--SDAFQKRLKEILQELGVKLVLGERVTNLDALPTDR----VETATVTTDKGTEISADLVIPCTGLKVNSMAYKDSLASSMEDNGSLKVNNFFEVQGTEG-IYAIGDCSNIPETKMAYRASMHSDLLAKNILAQETGGTKKEYK-PDPFIMVVSVGRKAAIGQKGTSLLPEFVVRMMKARDMMTGKFWKEMG 369 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351415 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11404 ID=mRNA_11404|Name=jgi.p|Trimin1|351415|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1269bp|location=Sequence derived from alignment at Contig_90:52818..58845- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CTCCTGTCAACAAAGCGGTGGCCGTCATCGGTGGAGGCTACGCCGGCACTback to top protein sequence of jgi.p|Trimin1|351415 >Trimin1|351415|estExt_Genemark1.C_Ctg_900007 ID=Trimin1|351415|estExt_Genemark1.C_Ctg_900007|Name=jgi.p|Trimin1|351415|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=259bp MEALFKERQDAIAAAERILIIGGGPVGMETAGEIAAHYGTTKQVTLVAAKback to top mRNA from alignment at Contig_90:52818..58845- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11404 ID=mRNA_11404|Name=jgi.p|Trimin1|351415|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6028bp|location=Sequence derived from alignment at Contig_90:52818..58845- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_90:52818..58845- >mRNA_11404 ID=mRNA_11404|Name=jgi.p|Trimin1|351415|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=777bp|location=Sequence derived from alignment at Contig_90:52818..58845- (Tribonema minus UTEX_B_3156 )back to top |