mRNA_11271 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|352348 vs. uniprot
Match: A0A835ZBM4_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBM4_9STRA) HSP 1 Score: 890 bits (2299), Expect = 0.000e+0 Identity = 477/477 (100.00%), Postives = 477/477 (100.00%), Query Frame = 1
Query: 1 MAALGCTPEDIGKSLLEVCKGCALRYLFPRIRQSLQLQIRGALDEACDDAADIPGFTTLDRARCFARCLLLLRGGGAAVLAPLRHLTCANLRRCEAAVAAARANRVFPPTLFSGNAQSPAXXXXXXXXXXXXXXXXXXXXXXXAARVLAALNTNSHELAEVEGSGLFLLACTMEHDCAPNCSFTTHADALWLTCVRDVRAGEHLSIDYGNNFYMPTASRQEDLWATYEFHCECQACTALPDIARCFRCPACGDAGRVHPPXXXSRDAAAQQRSPWQCAACAHACSPAETATLERAEAELQAALGAAMAAQSDGIGIEEETEDGDVVVPVEVVEAALARAPLVRPHHSLAFWCYEGAARAFAGDADACRGGAAEAALLRVLACVDAVLPRRHHERVVYWDMLAQTRVVAGNIEGAKRAYETAYEESKWVSGADTPPTLAILDLARNTPTSAQEMAQRYARSQQSHGGGGAEEEMDDTG 1431
MAALGCTPEDIGKSLLEVCKGCALRYLFPRIRQSLQLQIRGALDEACDDAADIPGFTTLDRARCFARCLLLLRGGGAAVLAPLRHLTCANLRRCEAAVAAARANRVFPPTLFSGNAQSPAXXXXXXXXXXXXXXXXXXXXXXXAARVLAALNTNSHELAEVEGSGLFLLACTMEHDCAPNCSFTTHADALWLTCVRDVRAGEHLSIDYGNNFYMPTASRQEDLWATYEFHCECQACTALPDIARCFRCPACGDAGRVHPPXXXSRDAAAQQRSPWQCAACAHACSPAETATLERAEAELQAALGAAMAAQSDGIGIEEETEDGDVVVPVEVVEAALARAPLVRPHHSLAFWCYEGAARAFAGDADACRGGAAEAALLRVLACVDAVLPRRHHERVVYWDMLAQTRVVAGNIEGAKRAYETAYEESKWVSGADTPPTLAILDLARNTPTSAQEMAQRYARSQQSHGGGGAEEEMDDTG
Sbjct: 1 MAALGCTPEDIGKSLLEVCKGCALRYLFPRIRQSLQLQIRGALDEACDDAADIPGFTTLDRARCFARCLLLLRGGGAAVLAPLRHLTCANLRRCEAAVAAARANRVFPPTLFSGNAQSPAXXXXXXXXXXXXXXXXXXXXXXXAARVLAALNTNSHELAEVEGSGLFLLACTMEHDCAPNCSFTTHADALWLTCVRDVRAGEHLSIDYGNNFYMPTASRQEDLWATYEFHCECQACTALPDIARCFRCPACGDAGRVHPPXXXSRDAAAQQRSPWQCAACAHACSPAETATLERAEAELQAALGAAMAAQSDGIGIEEETEDGDVVVPVEVVEAALARAPLVRPHHSLAFWCYEGAARAFAGDADACRGGAAEAALLRVLACVDAVLPRRHHERVVYWDMLAQTRVVAGNIEGAKRAYETAYEESKWVSGADTPPTLAILDLARNTPTSAQEMAQRYARSQQSHGGGGAEEEMDDTG 477
BLAST of jgi.p|Trimin1|352348 vs. uniprot
Match: D8LRD3_ECTSI (SET domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRD3_ECTSI) HSP 1 Score: 300 bits (769), Expect = 1.150e-92 Identity = 192/428 (44.86%), Postives = 242/428 (56.54%), Query Frame = 1
Query: 127 LDEACDDAADIPGFTTLDRARCFARCLLLLRGGGAAVLAPLRHLTCANLRRCEAAVAAARANRVFPPTLFSGNAQSPAXXXXXXXXXXXXXXXXXXXXXXXAARVLAALNTNSHELAEVEGSGLFLLACTMEHDCAPNCSFTTHADALWLTCVRDVRAGEHLSIDYGNNFYMPTASRQEDLWATYEFHCECQACTALPDIARCFRCPA--CGDAGRVHPPXXXSRDAAAQQRSPWQCAACAHACSPAETATLERAEAELQAALGAAMAAQSDGIGIEEETEDGDVVVPVEVVEAALARAPLVRPHHSLAFWCYEGAARAFAGDADACRGG-------AAEAALLRVLACVDAVLPRRHHERVVYWDMLAQTRVVAGNIEGAKRAYETAYEESKWVSGADTPPTLAILDLARNTPTSAQEMAQRYARSQ 1383
LD A D+ D+ TLDRARCF +C+L+ R + L PL LT ANL RC +V + R P LF + AAR+L LNTNSHEL +VEGSGLFL+AC MEHDC PNCSFTT D LW+T +R V GE LSIDYGNNFY+PTA R+ +L Y F C C+ACT LPD R FRCP+ C G+V P ++A +RS W C AC H C P E L AE L AL +D +G+E+ ++A + A +V P H + FW E A+ +G++ A GG AAEAA R+++ V+ LP HHE+VVY D LAQ+RVVAG+I+GA+ AYE+A+ S VSGA+T PTL I LA TPTSA E+ RY+ Q
Sbjct: 79 LDAAADEMCDLDAVNTLDRARCFIQCMLMYRKDPLS-LDPLAPLTAANLPRCLESVVSIRE---LIPGLFPDGMTN-----------------------DRAARILGTLNTNSHELEQVEGSGLFLMACIMEHDCTPNCSFTTFGDKLWVTAIRQVGEGERLSIDYGNNFYLPTAERKAELEDIYGFVCTCRACTVLPDRCRAFRCPSKDCRT-GKVCPHGDGGDESA--ERS-WGCLACGHQCDPEEIEVLLEAEESLSEAL-----EMADELGVEQ-------------IDALVQDARVVHPTHYVVFWALEATAKRLSGES-AGGGGRRERVAQAAEAAWARLVSAVEEALPALHHEKVVYLDALAQSRVVAGDIKGAREAYESAHRVSVMVSGANTIPTLDIKSLAERTPTSANELRARYSGGQ 456
BLAST of jgi.p|Trimin1|352348 vs. uniprot
Match: A0A1V9YDG8_9STRA (SET domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDG8_9STRA) HSP 1 Score: 224 bits (572), Expect = 1.470e-63 Identity = 158/432 (36.57%), Postives = 214/432 (49.54%), Query Frame = 1
Query: 154 DIPGFTTLDRARCFARCLLLLRGGGAAVLAPLRHLTCANLRRCEAAVAAARANRVFPPTLFSGNAQSPAXXXXXXXXXXXXXXXXXXXXXXXAARVLAALNTNSHELAEVEGSGLFLLACTMEHDCAPNCSFTTHADALWLTCVRDVRAGEHLSIDYGNNFYMPTASRQEDLWATYEFHCECQACTALPDIARCFRCPACGDAGRVHPPXXXSRDAAAQQRSPWQCAACAHACSPAETATLERAEAELQAALGAAMAAQSDGIGIEEETEDGDVVVPVEVVEAALARAPLVRPHHSLAFWCYEGAARAFAGDADACRGGAA------EAALL--RVLACVDAVLPRRHHERVVYWDMLAQTRVVAGNIEGAKRAYETAYEESKWVSGADTPPTLAILDLARNTPTSAQEMAQRYARSQQSHGGGGAEEEMDD 1425
D+ + +DRA+C +C+ A LA L L+ AN C+ A A R + +P + A +++ LNTNSHEL + GSGLFL AC MEH+CAPNCSFTT A LW+T +R + GE LSIDYGN FY PTA RQ + Y F C C AC++ PD+AR FRCP C +G VHP + C +C + +PA+ + AEA LQ EE D +E +EAA L+ P+H L FW DA RG A + A++ R+++ ++ +P HHE+ +Y+D LAQ RV+ G+I GA+ AY AYE S VSGA TPPTLA+ +L + P S E+ +RY G G +E MD+
Sbjct: 92 DLEIISDVDRAKCILKCITKYVENKKA-LADLLQLSHANDEACKEAAATLR--KAYPMVFQAVPAP-------------------------VLTKIIGVLNTNSHELETLGGSGLFLSACLMEHNCAPNCSFTTAATTLWVTAIRPIAVGEPLSIDYGNMFYRPTAERQASMLDGYGFECTCSACSSAPDLARAFRCPHC-PSGVVHPCPTTG----------YVCTSCKQSLAPAQVEAVCAAEAALQ-----------------EEFPDS-----LEAIEAASKE--LLHPNHYLLFWAL---------DALGLRGAQALVHNVEKLAVMWDRIISSMEYAVPGPHHEKTIYYDQLAQVRVITGDIAGAQAAYTKAYEISCIVSGATTPPTLALKELMDDVPKSRDELVERY--------GTGHDEYMDE 443
BLAST of jgi.p|Trimin1|352348 vs. uniprot
Match: T0Q4E2_SAPDV (SET domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=T0Q4E2_SAPDV) HSP 1 Score: 219 bits (557), Expect = 2.080e-61 Identity = 158/424 (37.26%), Postives = 208/424 (49.06%), Query Frame = 1
Query: 154 DIPGFTTLDRARCFARCLLLLRGGGAAVLAPLRHLTCANLRRCEAAVAAARANRVFPPTLFSGNAQSPAXXXXXXXXXXXXXXXXXXXXXXXAARVLAALNTNSHELAEVEGSGLFLLACTMEHDCAPNCSFTTHADALWLTCVRDVRAGEHLSIDYGNNFYMPTASRQEDLWATYEFHCECQACTALPDIARCFRCPACGDAGRVHPPXXXSRDAAAQQRSPWQCAACAHACSPAETATLERAEAELQAALGAAMAAQSDGIGIEEETEDGDVVVPVEVVEAALARAPLVRPHHSLAFWCYEGAARAFAGDADACRGGAAEAALL-RVLACVDAVLPRRHHERVVYWDMLAQTRVVAGNIEGAKRAYETAYEESKWVSGADTPPTLAILDLARNTPTSAQEMAQRYARSQQSHGGGGAEEEMD 1422
D+ + +DRA+C + + A+V A L L+ AN CEAA A+ R P +F QS +++ LNTNSHEL + G+GLFL AC MEH+CAPNCSFTT LW+T +R + E LSIDYGN FY PTA RQ + Y F C+C+ACT+ D AR FRC C +G VHP + + C +C +PAE + R EA LQ D + +E A+ R + PHH L FW + A G + AA+ R+++ ++ V+P HHE+ +Y+D LAQ RV+ G+I GAK AY AYE S VSGA TPPTLA+ DL N PT+ E+ QRY G G E E D
Sbjct: 91 DMDIISDVDRAKCILKVVTKYLESKASVAA-LLQLSHANNEACEAA---AKTLRKTFPIVFQSVPQS------------------------VLTKIIGVLNTNSHELETLGGTGLFLSACLMEHNCAPNCSFTTAETTLWVTAIRPIAPNEPLSIDYGNMFYRPTAERQASMLDGYCFACQCEACTSHIDRARAFRCGHC-QSGIVHP----------SPTAGYACQSCHQVLTPAEVDDVCRLEAALQENF-------------------PDTLAGIEA--ASTGR---LHPHHYLLFWALD--ALGLRGAQALVHNVSTLAAMWDRIISSMEYVVPGAHHEKTIYYDQLAQVRVITGDIAGAKAAYAKAYEISCVVSGAMTPPTLALKDLVENVPTTRDELVQRYGE------GHGDEMEYD 443
BLAST of jgi.p|Trimin1|352348 vs. uniprot
Match: A0A8K1CLC5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CLC5_PYTOL) HSP 1 Score: 217 bits (552), Expect = 2.260e-60 Identity = 146/427 (34.19%), Postives = 208/427 (48.71%), Query Frame = 1
Query: 130 DEACDDAADIPGFTTLDRARCFARCLLLLRGGGAAVLAPLRHLTCANLRRCEAAVAAAR--ANRVFPPTLFSGNAQSPAXXXXXXXXXXXXXXXXXXXXXXXAARVLAALNTNSHELAEVEGSGLFLLACTMEHDCAPNCSFTTHADALWLTCVRDVRAGEHLSIDYGNNFYMPTASRQEDLWATYEFHCECQACTALPDIARCFRC--PACGDAGRVHPPXXXSRDAAAQQRS---PWQCAACAHACSPAETATLERAEAELQAALGAAMAAQSDGIGIEEETEDGDVVVPVEVVEAALARAPLVRPHHSLAFWCY-----EGAARAFAGDADACRGGAAEAALLRVLACVDAVLPRRHHERVVYWDMLAQTRVVAGNIEGAKRAYETAYEESKWVSGADTPPTLAILDLARNTPTSAQEMAQRYA 1374
DE ++ G +DRARC +CL + + L + CAN+ RC+ R ++PP N Q A ++ NTN+HEL + GSGLFL AC MEH+C+PNCSFTT+ D LW+T +R ++ GE LSIDYGN FY PT R L+ TY F C C+ CT PD R F+C P+C D G + P S W+C C H + E + E AE EL + D+ V+ V+ + +PL + H+ L FW E AA + + + + AE R++ ++ V+P HHE+ +Y+D LAQ +VV GN+ GA+ AY AY+ S VSGA+ PTL + +L+ N PT+A+E+ + YA
Sbjct: 91 DEIVQTMRELEGIGEVDRARCILKCLAMFERDPKS-LDEVFECACANVDRCDEEATELRNLVPEIYPPGFT--NEQM--------------------------ATLIGVFNTNAHELENLGGSGLFLSACRMEHNCSPNCSFTTYDDKLWMTAIRPIKEGEALSIDYGNFFYRPTEERMTSLFETYGFVCTCETCTVQPDTCRSFKCTSPSCTD-GAIWPYPRKSEQPIEDPEELEYDWKCGDCGHVPTDEEVDSFEAAEQELL---------------------ENDLPETVDGVDEYVKTSPLHKRHYLL-FWALDAIGCEAAALSSVAEEEEDQKQLAEV-WKRIIEYMNVVVPYAHHEKTIYYDNLAQVQVVLGNLNGARDAYRQAYDISCIVSGAECEPTLKLKNLSENPPTTAEEVRKLYA 464
BLAST of jgi.p|Trimin1|352348 vs. uniprot
Match: A0A2D4BJC9_PYTIN (SET domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJC9_PYTIN) HSP 1 Score: 214 bits (546), Expect = 1.750e-59 Identity = 150/425 (35.29%), Postives = 202/425 (47.53%), Query Frame = 1
Query: 130 DEACDDAADIPGFTTLDRARCFARCLLLLRGGGAAVLAPLRHLTCANLRRCEAAVAAARANRVFPPTLFSGNAQSPAXXXXXXXXXXXXXXXXXXXXXXXAARVLAALNTNSHELAEVEGSGLFLLACTMEHDCAPNCSFTTHADALWLTCVRDVRAGEHLSIDYGNNFYMPTASRQEDLWATYEFHCECQACTALPDIARCFRCPACGDAGRVHPPXXXSRDAA--AQQRSPWQCAACAHACSPAETATLERAEAELQAALGAAMAAQSDGIGIEEETEDGDVVVPVEVVEAALARAPLVRPHHSLAFW------CYEGAARAFAGDADACRGGAAEAALLRVLACVDAVLPRRHHERVVYWDMLAQTRVVAGNIEGAKRAYETAYEESKWVSGADTPPTLAILDLARNTPTSAQEMAQRYARS 1380
+E + +++ G +DRARC +CL + AA L P+ LTCAN+ RC A + P + G + A+++ ALNTNSHEL + GSGLFL AC MEH+C PNCSFTT+ LW+T +R + AGE LSIDYGN FY PT R L +Y F C C AC PD R F+C C D + P S Q + W+C AC H S E A E EA L E+G + +E ++ L +P+ H+ L FW C A A+ D D R A+ R++ ++ +P HHE+ +Y+D LAQ V+ GN A AYE AYE + VSG D PT + +LA N P A+E+ + Y S
Sbjct: 91 NETVEALSEMEGIAEVDRARCILKCLGMFERD-AASLQPVLDLTCANMDRCLEE--AKQIREQLPAIIPEGFSDE------------------------QLAKLIGALNTNSHELENLGGSGLFLSACRMEHNCKPNCSFTTYDSELWMTAIRPIAAGEALSIDYGNFFYRPTEERMSTLQESYGFICSCDACLVEPDECRAFKCKGCSDGVVLPFPVKPSEPLTDPEQLKFEWKCKACGHTPSENECAEFEEVEAAL--------------------LENG-MPETLEEMDEFLQTSPMHERHYLL-FWALDAIGCEAAALNAYVDDEDH-RDELAKV-WQRLIKFMNITVPYPHHEKTIYYDNLAQVEVILGNRNAAMDAYEKAYEIACIVSGTDCTPTHXLKELAENPPADAEELRKVYGES 464
BLAST of jgi.p|Trimin1|352348 vs. uniprot
Match: A0A1W0A0L2_9STRA (SET domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A0L2_9STRA) HSP 1 Score: 209 bits (532), Expect = 7.570e-58 Identity = 145/407 (35.63%), Postives = 199/407 (48.89%), Query Frame = 1
Query: 175 LDRARCFARCLLLLRGGGAAVLAPLRHLTCANLRRCEAAVAAARANRVFPPTLFSGNAQSPAXXXXXXXXXXXXXXXXXXXXXXXAARVLAALNTNSHELAEVEGSGLFLLACTMEHDCAPNCSFTTHADALWLTCVRDVRAGEHLSIDYGNNFYMPTASRQEDLWATYEFHCECQACTALPDIARCFRCPACGDAGRVHPPXXXSRDAAAQQRSPWQCAACAHACSPAETATLERAEAELQAALGAAMAAQSDGIGIEEETEDGDVVVPVEVVEAALARAPLVRPHHSLAFWCYEGAARAFAGDADACRGGAAEAALL--------RVLACVDAVLPRRHHERVVYWDMLAQTRVVAGNIEGAKRAYETAYEESKWVSGADTPPTLAILDLARNTPTSAQEMAQRY 1371
+DRA+C +C+ + G + L+ L L+ AN C+AA + R + FP S +++ LNTNSHEL + G+GLFL AC MEH+CAPNCSFTT+ LW+T +R + GE LSIDYGN FY PT+ RQ + Y F C C ACT LPD+AR F CP C +G VH + ++C C + + + E ELQ L + +G+G +AA L+ HH L FW DA RG A + R++ ++ V+P HHE+ +Y+D LAQ RV+ G+I GAK+AY AYE S VSGA+TPPTLA+ +L + P S E+ +RY
Sbjct: 96 VDRAKCILKCITMYIGDKNS-LSNLLQLSYANEPACKAAASTLRKD--FPIAFQS-------------------------IPLSVLTKIIGVLNTNSHELETLNGTGLFLSACLMEHNCAPNCSFTTNETTLWVTAIRPIAIGEPLSIDYGNMFYRPTSERQATMLEGYGFECTCVACTELPDLARAFICPNC-PSGIVH----------LFPKEGYKCLQCQKLMNQKQIDQVCALEKELQEELPDTL----EGVG-----------------QAAKG---LLHQHHYLLFWAL---------DALGLRGAQALVHNVTKLAHMWDRIITSIEYVVPGAHHEKTIYYDQLAQVRVITGDIGGAKQAYSKAYEISCIVSGANTPPTLALKELVDDVPKSRDELVERY 430
BLAST of jgi.p|Trimin1|352348 vs. uniprot
Match: G4YKV5_PHYSP (SET domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4YKV5_PHYSP) HSP 1 Score: 203 bits (516), Expect = 4.450e-55 Identity = 152/448 (33.93%), Postives = 203/448 (45.31%), Query Frame = 1
Query: 85 PRIRQSLQLQIR-GALDEACDDAADIPGFTTLDRARCFARCLLLLRGGGAAVLAPLRHLTCANLRRCEAAVAAARANRVFPPTLFSGNAQSPAXXXXXXXXXXXXXXXXXXXXXXXAARVLAALNTNSHELAEVEGSGLFLLACTMEHDCAPNCSFTTHADALWLTCVRDVRAGEHLSIDYGNNFYMPTASRQEDLWATYEFHCECQACTALPDIARCFRCPACGDAGRVHPPXXXSRDAAAQQRSP------WQCAACAHACSPAETATLERAEAELQAALGAAMAAQSDGIGIEEETEDGDVVVPVEVVEAALARAPLVRPHHSLAFW------CYEGAARAFAGDADACRGGAAEAALL-RVLACVDAVLPRRHHERVVYWDMLAQTRVVAGNIEGAKRAYETAYEESKWVSGADTPPTLAILDLARNTPTSAQEMAQRYARSQQ 1386
P+I S +LQ G + + G +DRARC +CL L A L + LTCA +R +A A + R P +G + A ++ LNTNSHEL + GSGLFL AC MEH C PNCSFTT LW+T +R + G+ LSIDYGN FY PT RQE L +Y F C C+AC ++PD R RC + V P +A + P W+C C AE + AE +L G E E+ D VV R ++ H L FW C A AF +A + A A + R++A ++ V+P HHE+ +Y+D LAQ +VV G++ A +AY AYE S VSG D PT + L P +A+E+ Q YA Q
Sbjct: 86 PKIMYSPRLQDNVGRRNVVVSIMKSVDGIEEVDRARCILKCLALYERD-ARSLDEVLGLTCAGQQRAMSA--ALQLRRQLPDIFPAGFSDE------------------------QMATLIGVLNTNSHELENLGGSGLFLSACRMEHSCLPNCSFTTFDSTLWMTAIRPIAPGDALSIDYGNFFYRPTPERQESLLESYGFVCTCEACVSMPDPTRAVRCLSGNCPQGVMLPCPIRTNAPSSSIGPNQLQFEWRCQTCGKVADAAEHTRILAAEQDLMEN------------GFPESLEEVDAVV----------RRGVLHERHYLLFWALDNIGCEAAATTAFQAEAQMAQHRRALAQVWERIIAYMNVVVPTAHHEKTIYYDNLAQVQVVLGDLGAASQAYARAYEISCVVSGTDCSPTRKLQRLMEKPPQTAEELRQMYAAEAQ 484
BLAST of jgi.p|Trimin1|352348 vs. uniprot
Match: K3WTR7_GLOUD (SET domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTR7_GLOUD) HSP 1 Score: 202 bits (515), Expect = 4.880e-55 Identity = 149/420 (35.48%), Postives = 200/420 (47.62%), Query Frame = 1
Query: 151 ADIPGFTTLDRARCFARCLLLLRGGGAAVLAPLRHLTCANLRRCEAAVAA--ARANRVFPPTLFSGNAQSPAXXXXXXXXXXXXXXXXXXXXXXXAARVLAALNTNSHELAEVEGSGLFLLACTMEHDCAPNCSFTTHADALWLTCVRDVRAGEHLSIDYGNNFYMPTASRQEDLWATYEFHCECQACTALPDIARCFRCPACG-DAGRVHP-PXXXSRDAAAQQ--RSPWQCAACAHACSPAETATLERAEAELQAALGAAMAAQSDGIGIEEETEDGDVVVPVEVVEAALARAPLVRPHHSLAFW------CYEGAARAFAGDADACRGGAAEAALLRVLACVDAVLPRRHHERVVYWDMLAQTRVVAGNIEGAKRAYETAYEESKWVSGADTPPTLAILDLARNTPTSAQEMAQRYA 1374
AD+ G +DRARC RCL + +A L + LT AN R A A A+A+ +FP FS + S ++ ALNTNSHEL + GSGLFL AC MEH+C+PNCSFTT+ LW+T ++ + G+ LSIDYGN FY PT R L +Y F C C AC PD R F+C G +G V P P S + + W+C+ C+ S A AE L DG G E E+ D AL R ++ H L FW C A AF D + + R++ ++ V+P HHE+ +Y+D LAQ RV+ G++ GAK+AY AYE + VSG D PT + L N P +A ++ + YA
Sbjct: 93 ADLEGIAEVDRARCILRCLAMFERDNSA-LDEVLLLTSANYERSMEATAQLRAQASDIFPEG-FSDHQMS---------------------------TLIGALNTNSHELENLGGSGLFLSACRMEHNCSPNCSFTTYDSQLWMTAIKPIAKGDALSIDYGNFFYRPTEERMSSLLESYGFMCTCDACLINPDTCRSFQCQQSGCSSGIVWPYPKPQSEQLVSPEDLEFEWRCSGCSKTASKAHVTKFLAAEQHLL-----------DG-GFPESLEEVD----------ALVREGVLHERHYLLFWALDAIGCEAAALIAFLPDEE--HHKSLTQTWERIIKYMNVVVPAAHHEKTIYYDNLAQVRVILGDLAGAKQAYTQAYEIACRVSGTDCIPTEKLRKLMENPPQNAAQLREIYA 459
BLAST of jgi.p|Trimin1|352348 vs. uniprot
Match: A0A662Y8B8_9STRA (SET domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y8B8_9STRA) HSP 1 Score: 202 bits (515), Expect = 5.210e-55 Identity = 154/444 (34.68%), Postives = 206/444 (46.40%), Query Frame = 1
Query: 85 PRIRQSLQLQIR-GALDEACDDAADIPGFTTLDRARCFARCLLLLRGGGAAVLAPLRHLTCANLRRCEAAVAAARANRVFPPTLFSGNAQSPAXXXXXXXXXXXXXXXXXXXXXXXAARVLAALNTNSHELAEVEGSGLFLLACTMEHDCAPNCSFTTHADALWLTCVRDVRAGEHLSIDYGNNFYMPTASRQEDLWATYEFHCECQACTALPDIARCFRCPACGDAGRVHPPXXXSRDAAAQQRSP--WQCAACAHACSPAETATLERAEAELQAALGAAMAAQSDGIGIEEETEDGDVVVPVEVVEAALARAPLVRPHHSLAFW------CYEGAARAFAGDADACRGGAAEAALL-RVLACVDAVLPRRHHERVVYWDMLAQTRVVAGNIEGAKRAYETAYEESKWVSGADTPPTLAILDLARNTPTSAQEMAQRYARSQQ 1386
P+I S +LQ G + A + +DRARC +CL L A L + L CA R A AA++ R P G + A ++ LNTNSHEL + GSGLFL AC MEH+C PNCSFTT LW+T +R + G+ LSIDYGN FY PT RQ + +Y F C C+AC +LPD R RCPA A V P + QQ+ W+C +C + AE + AE +L E+G EV +A + R L H+ L FW C A AF A A A A + R++A ++ V+P HHE+ +Y+D LAQ +VV G+++ A +AY AYE + VSG D PT + L P +A+E+ Q YA Q
Sbjct: 82 PKIMYSPRLQDSVGRRNVVVGIMATLDAIEEVDRARCILKCLALYERNAHA-LDEVLSLACAGQER--ALQAASQLRRQLPDIFPRGFSDQ------------------------QMATLIGVLNTNSHELENLGGSGLFLSACRMEHNCVPNCSFTTFDATLWMTAIRPIAPGDALSIDYGNFFYRPTPERQASMLESYGFVCTCEACVSLPDTTRAVRCPAAACAQGVMLPYPVRANVPGQQQLEFEWRCQSCGKSADAAERTRILSAELDL--------------------LENGFPESLAEV-DAVVGRGVLHERHYLL-FWALDAIGCEAAATTAFQTGAGAAMHRRALAQVWERIIAHMNVVVPAAHHEKTIYYDNLAQVQVVLGDLQAASQAYARAYELACLVSGTDCTPTRKLQRLMEKPPQTAEELRQLYAAEAQ 476 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352348 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11271 ID=mRNA_11271|Name=jgi.p|Trimin1|352348|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1686bp|location=Sequence derived from alignment at Contig_116:139066..145195- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCAGCGCTCGGCTGCACGCCCGAGGACATCGGCAAGTCGCTACTGGAback to top protein sequence of jgi.p|Trimin1|352348 >Trimin1|352348|estExt_Genemark1.C_Ctg_1160029 ID=Trimin1|352348|estExt_Genemark1.C_Ctg_1160029|Name=jgi.p|Trimin1|352348|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=478bp MAALGCTPEDIGKSLLEVCKGCALRYLFPRIRQSLQLQIRGALDEACDDAback to top mRNA from alignment at Contig_116:139066..145195- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11271 ID=mRNA_11271|Name=jgi.p|Trimin1|352348|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6130bp|location=Sequence derived from alignment at Contig_116:139066..145195- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_116:139066..145195- >mRNA_11271 ID=mRNA_11271|Name=jgi.p|Trimin1|352348|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1434bp|location=Sequence derived from alignment at Contig_116:139066..145195- (Tribonema minus UTEX_B_3156 )back to top |