mRNA_11051 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|351358 vs. uniprot
Match: A0A835YI83_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI83_9STRA) HSP 1 Score: 858 bits (2216), Expect = 4.010e-312 Identity = 498/498 (100.00%), Postives = 498/498 (100.00%), Query Frame = 1 Query: 1 MCVALWFAEEGAENVKPKPKAETAKPTIXXXXXXXXXXXXXXXXXXXXKATPLPLLDQLSIDEIGIYASDFITMMQASFPPDLLFKNSLKDDGAVTDRQLENVFRKCVKGDTIRLGEMCPLSEVILHNGSRGSTGSLTLGMCATTAMDTKAVDIFIAEFALNDTTQYTLKTGFSSLPYELMLRDALTAFEVPPAIFNLYFWGPGLTYKTGQPEYVALEKKYQLTGISIRDLVWPFYSHHRAPYALRSDVAVDIHHPTRQIHQHTADLLTLYMSFHFNAWAGKAVTGAAALALDKSQLELPPPANPPLAKFNLADAHFQCGLVPNVDRVNGVVPVLAGATGVKVTTRFPCINVVSPDARARLSVSTREGWVFLSNCVLNKSKYRIAPDAAGSAVRLFDVTGGQRVRLFLVPVLPGSIEMFVVQPKLTPGRHTFEYLKYGKXXXXXXXXXXXXXXXXXXXXXXXXXLNTYGKYLKXXXXXXXXXXXXXXXXXSLALIVPA 1494 MCVALWFAEEGAENVKPKPKAETAKPTIXXXXXXXXXXXXXXXXXXXXKATPLPLLDQLSIDEIGIYASDFITMMQASFPPDLLFKNSLKDDGAVTDRQLENVFRKCVKGDTIRLGEMCPLSEVILHNGSRGSTGSLTLGMCATTAMDTKAVDIFIAEFALNDTTQYTLKTGFSSLPYELMLRDALTAFEVPPAIFNLYFWGPGLTYKTGQPEYVALEKKYQLTGISIRDLVWPFYSHHRAPYALRSDVAVDIHHPTRQIHQHTADLLTLYMSFHFNAWAGKAVTGAAALALDKSQLELPPPANPPLAKFNLADAHFQCGLVPNVDRVNGVVPVLAGATGVKVTTRFPCINVVSPDARARLSVSTREGWVFLSNCVLNKSKYRIAPDAAGSAVRLFDVTGGQRVRLFLVPVLPGSIEMFVVQPKLTPGRHTFEYLKYGKXXXXXXXXXXXXXXXXXXXXXXXXXLNTYGKYLKXXXXXXXXXXXXXXXXXSLALIVPA Sbjct: 1 MCVALWFAEEGAENVKPKPKAETAKPTIXXXXXXXXXXXXXXXXXXXXKATPLPLLDQLSIDEIGIYASDFITMMQASFPPDLLFKNSLKDDGAVTDRQLENVFRKCVKGDTIRLGEMCPLSEVILHNGSRGSTGSLTLGMCATTAMDTKAVDIFIAEFALNDTTQYTLKTGFSSLPYELMLRDALTAFEVPPAIFNLYFWGPGLTYKTGQPEYVALEKKYQLTGISIRDLVWPFYSHHRAPYALRSDVAVDIHHPTRQIHQHTADLLTLYMSFHFNAWAGKAVTGAAALALDKSQLELPPPANPPLAKFNLADAHFQCGLVPNVDRVNGVVPVLAGATGVKVTTRFPCINVVSPDARARLSVSTREGWVFLSNCVLNKSKYRIAPDAAGSAVRLFDVTGGQRVRLFLVPVLPGSIEMFVVQPKLTPGRHTFEYLKYGKXXXXXXXXXXXXXXXXXXXXXXXXXLNTYGKYLKXXXXXXXXXXXXXXXXXSLALIVPA 498
BLAST of jgi.p|Trimin1|351358 vs. uniprot
Match: A0A836CAR2_9STRA (RanBP2-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAR2_9STRA) HSP 1 Score: 323 bits (827), Expect = 4.210e-94 Identity = 176/397 (44.33%), Postives = 236/397 (59.45%), Query Frame = 1 Query: 187 EIGIYASDFITMMQASFPPDLLFKNSLKDDGAVTDRQLENVFRKCV-KGDTIRLG----------------------EMCPLSEVILHNGSRGSTGSLTLGMCATTAMDTKAVDIFIAEFALNDTTQY--TLKTGFSSLPYELMLRDALTAFEVPPAIFNLYFWGPGLTYKTGQPEYVALEKKYQLTGISIRDLVWPFYSHHRAPYALRSDVAVDIHHPTRQIHQHTADLLTLYMSFHFNAWAGKAVTGAAALALDKSQLELPPPANPPLAKFNLADAHFQCGLVPNVDRVNGVVPVLAGATGVKVTTR-FPCINVVSPDARARLSVSTREGWVFLSNCVLNKSKYRIAPDAAGSAVRLFDVTGGQRVRLFLVPVLPGSIEMFVVQPKLTPGRHTFE 1299 E+ +A F+ M +++ LF+NSLK GA TD+QLEN +R+CV G TI +G EMCP + V +H+G+R + GSLTLGMCA+TAM T +D+F+A+F LND+ +Y T+K F+S PYE+MLR+ LT FEVPPA+FNLYFWG TY T Q E L K Y TGIS+RDLVWPFY+ P++ + + DIHHP R++ Q T DLL LYM+ F W A+ G A+ + LPPP N LA +N F C LV + R NG P + + + V T PC+ S +A A + V + +G VF SNC+L + I AG+A+++++V GG RV L L P+L GSIEMF + P LTPG H E Sbjct: 1261 EVKAWAGKFMQQMHSNYTSAALFQNSLKTQGANTDKQLENFYRRCVTSGATIHIGILGGSISVDKEGYVGMFANRVREMCPSAYVAVHSGARNAAGSLTLGMCASTAMLTTKLDLFVADFTLNDSYKYKHTIKGIFTSTPYEIMLRNVLTQFEVPPAVFNLYFWGGAFTYDTQQDELDTLAKLYSTTGISLRDLVWPFYTSGTLPFSTKDHIVKDIHHPNRRVCQLTGDLLVLYMAERFVGWVDTALAGQASAVAGTFPVALPPPRNAQLADWNFT-FKFDCALVADAYRANGRTPYMVASNEMAVVTSPEPCVTFGSANASAVVPVHSNQGRVFFSNCMLETILFPIIGGTAGAAMQVYNVDGGGRVPLALRPMLNGSIEMFTIDPPLTPGWHMLE 1656
BLAST of jgi.p|Trimin1|351358 vs. uniprot
Match: A0A835ZKB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKB1_9STRA) HSP 1 Score: 258 bits (658), Expect = 5.820e-72 Identity = 161/425 (37.88%), Postives = 231/425 (54.35%), Query Frame = 1 Query: 160 PLLDQLSIDEIGIYASDFITMMQASFPPDLLFKNSLKDDGAVTDRQLENVFRKCVK-GDTIRLG----------------------EMCPLSEVILHNGSRGSTGSLTLGMCATTAMDTKAVDIFIAEFALNDTTQYTLKTG-FSSLPYELMLRDALTAFEVPPAIFNLYFWGPGLTYKTGQPEYVALEKKYQLTGISIRDLVWPFYSHHRAPYALRSDVAVDIHHPTRQIHQHTADLLTLYMSFHFNAWAGKAVTGAAALALDKSQLELPPPANPPLAKFNLADAHFQCGLVPNVDR-----------VNGVVPVLAGATGVKVTTRFPCINVVSPD-ARARLSVSTREGWVFLSNC---VLNKSKYRIAPDAAGSAVRLFDVTGGQRVRLFLVPVLPGSIEMFVVQPKLTPGRHTFEYLKYGK 1317 PL D + ++ + + I M ++PPD LF+NSLK GA+TD+QL +F KC+ G TIR+G +MCP + V NG+R S G+LTLGMCA T + A+D+ ++EF+LND YT G FS+LP+EL+ R L+A++ PA+FNL+FWG ++ + QP + A+ + Y +TGIS+RDLVWP+Y +APYA R DV VD HHP + + TA+LL LY++ F WA A G ++ ++ L LPPP P L +F+L A F C +V + G +P ++ G +V + PCI V A+A L + T++G V +SNC V SK P A G + D +RV LV ++ G+ E F V P L PG E L + Sbjct: 48 PLPDAATATQLWV--AKHIRHMHTTYPPDRLFENSLKHRGAITDQQLHPLFLKCITPGSTIRIGALGGSITHLPSSYIWPVGRLIAQMCPEATVETFNGARSSHGALTLGMCART-VTAPALDLAVSEFSLNDRAHYTADDGTFSALPFELLTRTLLSAYDPAPAVFNLFFWGMSFSHDSAQPWHEAVGEHYDVTGISLRDLVWPYYETSKAPYARRQDVCVDGHHPNDRFQKFTAELLLLYVAQRFQEWAAGAAKGGVDASIGRTPLRLPPPLAPDLERFDLESAKFDCAIVGGSKDFGSAQAKQRGVLRGRLPEMSVMEGWQVLSDPPCIQVTDMQGAQALLPLHTQQGHVIMSNCHRPVPWGSKGNQGP-AFGVNLLRGDGEPYERVPQRLVSMVDGNFEAFRVDPLLPPGDVLLEVLSISR 468
BLAST of jgi.p|Trimin1|351358 vs. uniprot
Match: A0A836CKC8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKC8_9STRA) HSP 1 Score: 218 bits (555), Expect = 9.800e-62 Identity = 144/404 (35.64%), Postives = 204/404 (50.50%), Query Frame = 1 Query: 199 YASDFITMMQASFPPDLLFKNSLKDDGAVTDRQLENVFRKCVK-GDTIRLGEM-----------------------CPLSEVILHNGSRGSTGSLTLGMCATTAMDTKAVDIFIAEFALNDTTQYTLKTGFSSLPYELMLRDALTAFEVPPAIFNLYFWGPGLTYKTGQPEYVALEKKYQLTGISIRDLVWPFYSHHRAPYALRSDVAVDIHHPTRQIHQHTADLLTLYMSFHFNAWAGKAVTGAAALALDK--SQLELPPPANPPLAKFNLADAHFQCGLVPNVDRVNGVVPVLA--GATGVKVTTRFPCINVVSPDARARLSVSTREGWVFLSNCVLNKSKYRIAPDAAGSAVRLF-------DVTGGQRVRLFLVPVLPGSIEMFVVQPKLTPGRHTFEYL 1305 +A+ I MQA P D L N+LK+ GA T+RQL+ +F KC+ G I LG + CP + V +HNG+R + GSLT+GMCA + + VD+ I EF+LND + Y + YEL LR ALT+F+ PA+ L+FWGP T ++ Q + L K Y +TGIS+RDLVWP+ +AP+ R+DV D HHPT +H +TA+L+ LY+S F W+ A L L LP P +P L + +L +C ++D V G L G V TR PC++ S ++ + V T++G + +SNC + P V L D R R+ L P++ S E F+ P L+PGRH E L Sbjct: 40 FATAHIAKMQAVRPEDQLLLNALKNHGASTERQLQVLFWKCITPGARIVLGVLGGSISAFEDVSYQYPLGKFLRGLCPFATVEVHNGARAAHGSLTVGMCARCGLG-QHVDMLILEFSLNDWSHYHRHNETACASYELALRTALTSFQHAPAVLGLFFWGPYFTKQSAQDYHEPLCKHYGVTGISMRDLVWPYIEAQKAPWTKRTDVCSDSHHPTPAVHLYTANLIALYVSGVFLDWSKNVTVTAPTRRLSSLLPPLALPEPISPELGRLDLIRGKLKCKW--SIDSVYGSESRLELYENEGWSVQTRPPCVHFTSANSTVLVPVETQQGVLIMSNCFRVPGYWETGPAFQVLEVYLLEQAVDDNDKPVVSRSRVNLEPLVHQSGESFIADPPLSPGRHVLEVL 440
BLAST of jgi.p|Trimin1|351358 vs. uniprot
Match: A0A835YLT4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLT4_9STRA) HSP 1 Score: 211 bits (536), Expect = 1.170e-57 Identity = 168/492 (34.15%), Postives = 227/492 (46.14%), Query Frame = 1 Query: 148 ATPLPLLDQLSIDEIGI---------YASDFITMMQASFPPDLLFKNSLKDDGAVTDRQLENVFRKCVK-GDTIR----------------------LGEMCPLSEVILHNGSRGSTGSLTLGMCATTAMDTKAVDIFIAEFALNDTTQYTLKTG-----FSSLPYELMLRDALTAFEVPPAIFNLYFWGPGLTYKTGQPEYVALEKKYQLTGISIRDLVWPFYSHHRAPYALRSDVAVDIHHPTRQIHQHTADLLTLYMSFHFNAWAGKAVTGAAALAL-DKSQLELPPPANPPLAKFNLADAHFQCGLV--PNVDRVNGVVPVLAGATGVKVTTRFPCIN--------------------VVSP----------------------------------------DARARLSVSTREGWVFLSNCVLNKSKYRIAPDAA----GSAVRLFDVTGG----QRVRLFLVPVLPGSIEMFVVQPKLTPGRHTFE 1299 A LP LD D + +A+ I M+A +PPD LF+NSLK G VTD QLE FRKCV G +R LGEMCP + V NG+R S G+LTLG+CA A+ A+D+ +AEFALND QYT G FS+LPYELM+R+A T +++ Q + + ++Y +TG+S+RDLVWP+++ RAPYA R DV D+HHP Q TA+L+ LY++ F WA + +G A+ A + L LPPP +P L +F+L F+C LV P++ ++ G +P + +G +VT CI V P A A L V T +G V LSNC +R P A G A L + G +R+ L LV VL G+ E F V+P L G HT E Sbjct: 26 ARALPTLDAELQDRFALPPSASATEQWANAHIERMRAHYPPDRLFENSLKLRGEVTDLQLEPFFRKCVTPGSAVRVGAIGGSITHAPTSYVWSLGALLGEMCPHANVTALNGARSSHGALTLGLCAR-AVTHAALDVAVAEFALNDLGQYTRAEGAFRGQFSALPYELMMRNAFT-------------------HESAQEAHEEVGRRYGVTGLSLRDLVWPYFTAKRAPYAARGDVCSDLHHPNAQFQHFTAELVLLYIAERFVEWATRVRSGEASNATRGLAPLALPPPLHPELERFDLTHGGFECALVGAPSI-KMPGRLPEMPVMSGWRVTEFPQCIQRHLYAYLSFCELFCTLHIHRVFEPARGPERTLPPRGAAPAAHAVDTVASTRKTGETCAQITDLRKASAFLPVHTEQGVVMLSNC------FRPGPPAMPKDHGPAFNLNLLVGDAPPYRRLPLELVSVLAGNYETFQVEPPLPAGNHTLE 490
BLAST of jgi.p|Trimin1|351358 vs. uniprot
Match: A0A836CCV4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCV4_9STRA) HSP 1 Score: 188 bits (478), Expect = 4.630e-49 Identity = 140/412 (33.98%), Postives = 191/412 (46.36%), Query Frame = 1 Query: 175 LSIDEIGIYASDFITMMQASFPPDLLFKNSLKDDGAVTDRQLENVFRKCVK-GDTIRLG----------------------EMCPLSEVILHNGSRGSTGSLTLGMCATTAMDTKAVDIFIAEFALNDTTQYTLKTG-FSSLPYELMLRDALTAFEVPPAIFNLYFWGPGLTYKTGQPEYVALEKKYQLTGISIRDLVWPFYSHHRAPYALRSDVAVDIHHPTRQIHQHTADLLTLYMSFHFNAWAGKAVTGAAALALDKSQLELPPPANPPLAKFNLADAHFQCGLVPNVDRV----NGVVPVLAGATGVKVTTRFPCINVVSPDARARL-SVSTREGWVFLSNCVLNKSKYRIAPDAAGSAVRLFDVTGG----QRVRLFLVPVLPGSI----EMFVVQPKLTPGRHTFE 1299 LS+ +A+ I +M PPD LF+NSL G +TD QLE FRKCV G I +G EMCP + V NG+RGS GSLTLGMC T + +DI AEFALND QY + G SS PYELM R L ++ PA+F+L+ WG + + Q + + + Y +T +S+RDLVWP+ P+ + + D +H I + A L LY+ F WA + G S + LP P N L +++ A F C +V + + G +PV+ G +V CI V+ A + L V + G V SNC YR A R+ V G +R L LV + G + EM+ V P L PG E Sbjct: 57 LSLSPTAAFAAAQIAVMHR-LPPDQLFRNSLVHRGGITDLQLEIFFRKCVTAGSVINVGAIGGSNTQLPWSFLWPVVDMLQEMCPKTTVTGFNGARGSHGSLTLGMCVKT-VTAPELDIAFAEFALNDEGQYRHQNGNTSSFPYELMTRTMLANYDPAPAVFSLFMWGRNFKFDSAQADLEPIVEYYNVTALSLRDLVWPYVMDEAEPWPSVARLTRDKNHAIASIQHYVARLFVLYICERFQEWAARISDGTFDPNAGLSPVVLPAPLNQALFLYDVETASFDCAIVGSPGLIFAPMPGRLPVMLATHGWQVFEDTQCIQVLDMTAASTLLPVHSTLGIVLFSNC------YRPGYLDTTPAFRINLVEGDAEPYKRTPLQLVSAMQGDLDGNAEMYRVDPPLEPGARVLE 460
BLAST of jgi.p|Trimin1|351358 vs. uniprot
Match: A0A836CHL6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL6_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.770e-48 Identity = 103/251 (41.04%), Postives = 139/251 (55.38%), Query Frame = 1 Query: 244 DLLFKNSLKDDGAVTDRQLENVFRKCVK-GDTIRLGE-------------------------MCPLSEVILHNGSRGSTGSLTLGMCATTAMDTKAVDIFIAEFALNDTTQYTLKTGFSSLPYELMLRDALTAFEVPPAIFNLYFWGPGLTYKTGQPEYVALEKKYQLTGISIRDLVWPFYSHHRAPYALRSDVAVDIHHPTRQIHQHTADLLTLYMSFHFNAWAGKAVTGAAALALDKSQLELPPPANPP 918 D L++ +L + G TD QLE ++ KC+ G I LG+ MCP + V LHN + G+TGSL LGMCA + + + VD+ + EF+LND T Y + S YEL +R LT+F+ PAIFNL+FWG G + Q + + + Y LTGIS+RD VWP+ + RAP+A R DV D HHPT H +T LL LY++ F WA + AA ALD ++ LPPP PP Sbjct: 6 DQLWQTALTNRGERTDEQLEALYHKCITPGSRIVLGQLGGSISADPAGGSNYGMTLQKFLQNMCPDATVQLHNAAAGTTGSLQLGMCARSGLG-QHVDVLLLEFSLNDYTHYHNRGQTESPAYELAVRAGLTSFQHAPAIFNLFFWGIGFQNTSAQEFHAPIARHYGLTGISLRDAVWPYLTAQRAPWAARGDVVKDSHHPTNAFHAYTGRLLALYVAERFLDWARR---DDAAAALDSARFALPPPTLPP 252
BLAST of jgi.p|Trimin1|351358 vs. uniprot
Match: A0A835YK35_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK35_9STRA) HSP 1 Score: 174 bits (441), Expect = 4.980e-48 Identity = 90/211 (42.65%), Postives = 123/211 (58.29%), Query Frame = 1 Query: 277 GAVTDRQLENVFRKCVKGDTI-----------------------RLGEMCPLSEVILHNGSRGSTGSLTLGMCATTAMDTKA-VDIFIAEFALNDTTQYTLKTGFSSLPYELMLRDALTAFEVPPAIFNLYFWGPGLTYKTGQPEYVALEKKYQLTGISIRDLVWPFYSHHRAPYALRSDVAVDIHHPTRQIHQHTADLLTLYMSFHFNAW 837 G+ D Q++N FRKCV + +L EMCP +EV L+NG+R ST S+TLG CA TAM + +D+FI+EF ND +YT FSSLPYELMLR LTAF P++ L+FWG T+KT Q V L ++Y+++ +SIRD++WP+Y+ R PY + +D HP+ +HQ TADLL + F AW Sbjct: 1 GSSADVQMQNFFRKCVTPGAVINVGILGGSISQFGYGYQVTFIKQLAEMCPSAEVKLYNGARSSTPSMTLGYCAVTAMGGPSELDLFISEFTYNDGVKYTTDGAFSSLPYELMLRSVLTAFPYSPSVLTLHFWGLDFTHKTPQAALVKLARRYKVSALSIRDVIWPYYTAGRDPYGSKDKCTIDGRHPSLAVHQLTADLLQTHFVTRFLAW 211
BLAST of jgi.p|Trimin1|351358 vs. uniprot
Match: A0A835ZIV9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIV9_9STRA) HSP 1 Score: 166 bits (419), Expect = 1.910e-44 Identity = 98/240 (40.83%), Postives = 130/240 (54.17%), Query Frame = 1 Query: 421 MCATTAMDTKA-VDIFIAEFALNDTTQYTLKTGFSSLPYELMLRDALTAFEVPPAIFNLYFWGPGLTYKTGQPEYVALEKKYQLTGISIRDLVWPFYSHHRAPYALRSDVAVDIHHPTRQIHQHTADLLTLYMSFHFNAWAGKAVTGAAALALDKSQLELPPP--ANPP-LAKFNLADAHFQCGLVPNVDRVNGVVPVLAGATG-----VKVTTRFPCINVVSPDARARLSVSTREGWVF 1113 MCA AM + +D+ +AEF LND +Y + F SLPYELMLR L+AF+ PPA+ L+FWG +K+ Q VAL + Y LT ISIRD +WP+Y R P+A + + +D HP+ + Q TADLL Y++ F W A+ G A+ K ++ LP P AN LA + L A F C +V R NG PVL A V C+ S ARA++ VS G VF Sbjct: 1 MCAEDAMGSPTRLDLAVAEFTLNDGIKYDIGGAFDSLPYELMLRTLLSAFDHPPALLTLHFWGSRFEFKSPQAALVALSEAYDLTAISIRDAIWPYYKSQREPFATKQECTLDGLHPSLAVEQLTADLLFFYINLKFVKWVDGAIDGTASTTDGKDRVPLPAPSAANKDILAGYKLNKARFDCAIVRESGRDNGHAPVLIDAVDIIEDDVGTLAYRSCMKFTSAAARAKVEVSMATGRVF 240
BLAST of jgi.p|Trimin1|351358 vs. uniprot
Match: A0A835Z775_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z775_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.300e-43 Identity = 88/199 (44.22%), Postives = 118/199 (59.30%), Query Frame = 1 Query: 277 GAVTDRQLENVFRKCVK-GDTIRLG----------------------EMCPLSEVILHNGSRGSTGSLTLGMCATTAMDTKAVDIFIAEFALNDTTQYTLKTG-FSSLPYELMLRDALTAFEVPPAIFNLYFWGPGLTYKTGQPEYVALEKKYQLTGISIRDLVWPFYSHHRAPYALRSDVAVDIHHPTRQIHQHTADL 801 GA T+ QL NVF KCV G I +G +CP ++V +HNG+R S G+LTLG+CA M + +DI + EF+LND QYTL G FSSLPYEL R LT + PA+F + FWG TY + QP + + K Y +TGIS+RD+VWP++S RAP+A ++DV D+HHP +H TA + Sbjct: 11 GASTEAQLRNVFLKCVTPGADINVGAIGGSITEHDDSWAGNFSALLSHLCPRAQVRMHNGARASHGALTLGLCARAVMAPE-LDIAMLEFSLNDQGQYTLPNGTFSSLPYELATRTVLTGTDPTPAVFGISFWGRSFTYDSAQPYHEEVHKLYGVTGISLRDMVWPYFSKGRAPFATKADVCSDVHHPNAFVHGLTAQV 208 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351358 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11051 ID=mRNA_11051|Name=jgi.p|Trimin1|351358|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1497bp|location=Sequence derived from alignment at Contig_88:359425..365767- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTGTGTTGCCCTCTGGTTTGCGGAGGAGGGTGCGGAGAATGTGAAACCback to top protein sequence of jgi.p|Trimin1|351358 >Trimin1|351358|estExt_Genemark1.C_Ctg_880042 ID=Trimin1|351358|estExt_Genemark1.C_Ctg_880042|Name=jgi.p|Trimin1|351358|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=499bp MCVALWFAEEGAENVKPKPKAETAKPTIQPAARPVVTANPTEKPTEEPKAback to top mRNA from alignment at Contig_88:359425..365767- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11051 ID=mRNA_11051|Name=jgi.p|Trimin1|351358|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6343bp|location=Sequence derived from alignment at Contig_88:359425..365767- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_88:359425..365767- >mRNA_11051 ID=mRNA_11051|Name=jgi.p|Trimin1|351358|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1497bp|location=Sequence derived from alignment at Contig_88:359425..365767- (Tribonema minus UTEX_B_3156 )back to top |