mRNA_11047 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|351355 vs. uniprot
Match: A0A835YJX2_9STRA (VPS37 C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJX2_9STRA) HSP 1 Score: 808 bits (2087), Expect = 3.060e-293 Identity = 415/415 (100.00%), Postives = 415/415 (100.00%), Query Frame = 1 Query: 1 MSWLFGTGGKTKSPRHGQQQGGGSTSDDADMKHHRLTQLAGLERDIPGIVKRAADGALYEVPVPVGPDGHPVNMRIFFPVKFPVERPVLQLLSTVDHPWVNEYMQVVGHPDLALWRGNAGKPISVIVKEIMIELSGGTASTAGQALPQQPSQRMPTNAASFAHPSTGPQQWQQQQPSWRPDERKPNWTPPEGPIGAANGNSGGQFWRPQPSDGSQSGGGRVGGGAAQWSPSQVGAGGGGSSTDAKRVEEKHRTPIPAIPSRFAELDGLTEAQLRRLAGDGVALAQIVDGMASARGMRELLRDLAKGNAEVAKANMESSRKLDELRDEITALKMELHEAAALNPVGVGAGASADHVTLKAVKEAAKDADQSSQAVADSFLAGRAGVGEFLEGFMAQRQRYHRCAARMECVKREMGF 1245 MSWLFGTGGKTKSPRHGQQQGGGSTSDDADMKHHRLTQLAGLERDIPGIVKRAADGALYEVPVPVGPDGHPVNMRIFFPVKFPVERPVLQLLSTVDHPWVNEYMQVVGHPDLALWRGNAGKPISVIVKEIMIELSGGTASTAGQALPQQPSQRMPTNAASFAHPSTGPQQWQQQQPSWRPDERKPNWTPPEGPIGAANGNSGGQFWRPQPSDGSQSGGGRVGGGAAQWSPSQVGAGGGGSSTDAKRVEEKHRTPIPAIPSRFAELDGLTEAQLRRLAGDGVALAQIVDGMASARGMRELLRDLAKGNAEVAKANMESSRKLDELRDEITALKMELHEAAALNPVGVGAGASADHVTLKAVKEAAKDADQSSQAVADSFLAGRAGVGEFLEGFMAQRQRYHRCAARMECVKREMGF Sbjct: 1 MSWLFGTGGKTKSPRHGQQQGGGSTSDDADMKHHRLTQLAGLERDIPGIVKRAADGALYEVPVPVGPDGHPVNMRIFFPVKFPVERPVLQLLSTVDHPWVNEYMQVVGHPDLALWRGNAGKPISVIVKEIMIELSGGTASTAGQALPQQPSQRMPTNAASFAHPSTGPQQWQQQQPSWRPDERKPNWTPPEGPIGAANGNSGGQFWRPQPSDGSQSGGGRVGGGAAQWSPSQVGAGGGGSSTDAKRVEEKHRTPIPAIPSRFAELDGLTEAQLRRLAGDGVALAQIVDGMASARGMRELLRDLAKGNAEVAKANMESSRKLDELRDEITALKMELHEAAALNPVGVGAGASADHVTLKAVKEAAKDADQSSQAVADSFLAGRAGVGEFLEGFMAQRQRYHRCAARMECVKREMGF 415
BLAST of jgi.p|Trimin1|351355 vs. uniprot
Match: D7FJ10_ECTSI (VPS37 C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ10_ECTSI) HSP 1 Score: 191 bits (486), Expect = 2.800e-52 Identity = 153/428 (35.75%), Postives = 213/428 (49.77%), Query Frame = 1 Query: 1 MSWLFGTGGKTKSPRHGQQQGGGSTSDDADMKHHRLTQLAGLERDIPGIVKRAADGALYEVPVPVGPDGHPVNMRIFFPVKFPVERPVLQLLSTVDHPWVNEYMQVVGHPDLALWRGNAGKPISVIVKEIMIEL--SGGTASTAGQALPQQPSQRMPTNAASFAHPSTGPQQWQQQQPSWR-PDERKPNWTPPE-GPIGAANGNSGGQFWRPQPS--DGSQSGGGRVGGGAAQWSPSQVGAGGGGSSTDAKRVEEK-HRTPIPAIPSRFAELDGLTEAQLRRLAGDGVALAQIVDGMASARGMRELLRDLAKGNAEVAKANMESSRKLDELRDEITALKMEL------HEAAALNPVGVGAGASADHVTLKAVKEAAKDADQSSQAVADSFLAGRAGVGEFLEGFMAQRQRYHRCAARMECVKREMGF 1245 MSWLFG+G + K+P + +D++ R Q++ L+ +PG++ ++ D +L EV + PDG V +R+F P KFP +RPVLQLLS V HPWVN YMQVVGHPDL W G I IV ++ E S G +T+G+ Q W P ++P+ TPP G G N P S G +GG G A + + GG +R+ H TPIP IP F EL GL+ +L RL GD A ++ GM + M++L D+ KGN E A+ + LR+E +K EL +E A + G G +AD + LK VK A+K AD SS+ VA FL R +FL+ F+ +RQRYH AA++EC+KR++ F Sbjct: 1 MSWLFGSGNR-KTP-----------TGQSDIRAARDRQISNLKERVPGLLLKSTDNSLNEVQI-TAPDGAKVVLRVFLPTKFPSDRPVLQLLSPVTHPWVNTYMQVVGHPDLHGWDGTNPPLIGDIVAAVIQEFGRSNGGVTTSGRV---------------------------QASTVWGGPIAQEPSGTPPAVGAFGLGN---------PPVSYPAGRATGGAASAKGKAHMTSTDPRTGG---EVQTRRMRPPVHHTPIPDIPDTFGELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLREEGEKIKAELKALQTSYEDKA-HGGGKNMGGTADQMILKRVKHASKMADTSSEQVATDFLEKRVPTQDFLDEFLKERQRYHMLAAKIECMKRDIRF 375
BLAST of jgi.p|Trimin1|351355 vs. uniprot
Match: A0A485K5B2_9STRA (Aste57867_1311 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K5B2_9STRA) HSP 1 Score: 105 bits (263), Expect = 3.940e-21 Identity = 106/355 (29.86%), Postives = 160/355 (45.07%), Query Frame = 1 Query: 202 DGHPVNMRIFFPVKFPVERPVLQLLSTVDHPWVNEYMQVVGHPDLALWRGNAGKPISVIVKEIMIELSGGTASTAGQALPQQPSQRMPTNAASFA--HP----STGPQQWQQQQPSWRPDERKPNWTPPEGPIGAANGNSGGQFWRPQPSDGSQSGGGRVGGGAAQWSPSQVGAGGGGSSTDAKRVEEKHRTPIPAIPSRFAELDGLTEAQLRRLAGDGVALAQIVDGMASARGMRELLRDLAKGNAEVAKANMESSRKLDELRDEITALKMELHEAAALNPVGVGAGASADHVTL---------KAVKEAAKDADQSSQAVADSFLAGRAGVGEFLEGFMAQRQRYHRCAARME 1221 D + +RI P +FP++ PV+Q S V H W++ +V GH DLA W +A I IV +I+ E G+ + PT AS A +P ST P QQP + P + P + G+A + G Q +PQP GS + P+ + A G K E T PAIP+ F EL+ L++AQL +L GD L + M S ++ DL +GN E+A+ N+ L L+ E+ ALK ++H + A + H + + V AA +AD +S+ +A F G V +F+ F+ R+ YH A++E Sbjct: 57 DARTLTLRITLPDEFPMQAPVIQTTSRVQHSWLDSQCRVAGHIDLASWSAHAD--IGRIVSDIVAEFQRSPPVPVGRGV------STPTVGASAASMYPTPAISTTPAAPSYQQP-FHPHSQYPAYP------GSAASSYGQQ--QPQPVVGSP------------YPPAPI-AYNHGYGEQPKPREAASMTQSPAIPAVFPELEELSQAQLEKLVGDRATLKAYIKNMDSVVNFMKIYDDLVQGNHELAETNLGHEGSLQTLQSEVHALKQQVHTVQE----ALAAKQATQHELMAQFQPQAFVQRVSAAADEADNASEDIAARFTNGEIDVNQFVAEFLPTRKLYHVRTAKVE 377
BLAST of jgi.p|Trimin1|351355 vs. uniprot
Match: A0A1V9ZZK3_9STRA (VPS37 C-terminal domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZK3_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 4.410e-18 Identity = 92/356 (25.84%), Postives = 150/356 (42.13%), Query Frame = 1 Query: 199 PDGHPVNMRIFFPVKFPVERPVLQLLSTVDHPWVNEYMQVVGHPDLALWRGNAGKPISVIVKEIMIELSGGTASTAGQALPQQPSQRMPTNAA---SFAHPSTGPQQWQQQQPSWRPDERKPNWTPPEGPIGAANGNSGGQFWRPQPSDGSQSGGGRVGGGAAQWSPSQVGAGGGGSSTDAKRVEEKHRTPIPAIPSRFAELDGLTEAQLRRLAGDGVALAQIVDGMASARGMRELLRDLAKGNAEVAKANMESSRKLDELRDEITALKMELHEAAALNPVGVGAGASAD-------HVTLKAVKEAAKDADQSSQAVADSFLAGRAGVGEFLEGFMAQRQRYHRCAARMECVKRE 1236 PD + +RI P FP++ P++Q S V H W++ V GH DLA W +A I IV +I+ E + AG+ + P P + ++ P Q QQQ PS+ TP A+ S + P P K E+ T PAIP+ F EL+ L +QL L D AL + M S +L +L KGN E+A+ N+ + +L+ ++ LK ++ AA + V + + ++ V +AA++ D++++ + F G V +FL ++ R+ YH AA++E K++ Sbjct: 56 PDSRTLTLRITLPDDFPMQAPLIQTTSRVQHRWLDSQCHVAGHIDLASWSVHAD--IGRIVSDIINEFQRNPPAMAGRTMSTPPPAYHPPQPSITPAYNQPFYAASQTQQQPPSYTQYPASMLSTP-------ASYKSYSRESTPPPQ---------------------------------KPKEQYVHTQTPAIPTSFPELNELPTSQLENLVSDRQALKAYIRNMDSVINFMKLYEELLKGNTELAEKNLTFESTVADLQKDVQGLKTQVQ--AAQEVLNVKQARQQEILSRVRPDILVERVSQAAEEMDENTEDIGSRFTNGEMDVNQFLSEYIPSRKLYHLRAAKVESFKQQ 367
BLAST of jgi.p|Trimin1|351355 vs. uniprot
Match: A0A6G0X4B8_9STRA (VPS37 C-terminal domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X4B8_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.950e-16 Identity = 98/348 (28.16%), Postives = 146/348 (41.95%), Query Frame = 1 Query: 202 DGHPVNMRIFFPVKFPVERPVLQLLSTVDHPWVNEYMQVVGHPDLALWRGNAGKPISVIVKEIMIELSGGTASTAGQALPQQPSQRMPTNAASFAHPSTGPQQWQQQQPSWRPDERKPNWTPPEGPIGAANGNSGGQFWRPQPSDGSQSGGGRVGGGAAQWSPS-QVGAGGGGSSTDAKRVEEKHRTPIPAIPSRFAELDGLTEAQLRRLAGDGVALAQIVDGMASARGMRELLRDLAKGNAEVAKANMESSRKLDELRDEITALKMELHEAAALNPVGVGAGASADHVT-------LKAVKEAAKDADQSSQAVADSFLAGRAGVGEFLEGFMAQRQRYHRCAARME 1221 D + +RI P FP++ PV+Q S V H W++ +VVGH DL W +A I IV +I+ E G+A P+ P N+A PS+ P Q P P A G +G + +P PS Q+ KR H T PAIP+ F ELD L+ QL +L D L + M S +L DL +GN E+A +N+ + L+ EI LK +LH A + V + +T + V +AA +AD++S+ +A F G V +F+ F R+ +H A+++ Sbjct: 42 DSRTLTLRITLPDDFPMQGPVIQTTSRVQHSWLDSQCRVVGHIDLTSWSAHAD--IGRIVSDIVTEFQRSPPVPIGRAA-TTPTPMYPDNSA---RPSSIPSYMQPFPPQ---ASTYPXXXXXXXXXAAQAGYNGSAYQQP---------------------PSVQMXXXXXXXXXXXKRETVSH-TQAPAIPAVFPELDQLSVNQLEKLVTDRATLKAYIKNMDSVVNFMKLYDDLVEGNQELADSNLAHESSISSLQVEIEELKHQLHTAQ--EGLNVKLAKQNELMTQFQPEPLVARVVDAADEADEASEEIASRFANGEIDVSQFVAEFQPIRKLFHLRTAKVD 356
BLAST of jgi.p|Trimin1|351355 vs. uniprot
Match: A0A024UNZ5_9STRA (VPS37 C-terminal domain-containing protein (Fragment) n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UNZ5_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 2.470e-16 Identity = 99/355 (27.89%), Postives = 152/355 (42.82%), Query Frame = 1 Query: 202 DGHPVNMRIFFPVKFPVERPVLQLLSTVDHPWVNEYMQVVGHPDLALWRGNAGKPISVIVKEIMIELS---------GGTASTAGQALPQQPSQRMPTNAA----SFAHPSTGPQQWQQQQPSWRPDERKPNWTPPEGPIGAANGNSGGQFWRPQPSDGSQSGGGRVGGGAAQWSPSQVGAGGGGSSTDAKRVEEKHRTPIPAIPSRFAELDGLTEAQLRRLAGDGVALAQIVDGMASARGMRELLRDLAKGNAEVAKANMESSRKLDELRDEITALKMELHEAAALNPVGVGAGASADHVTL---------KAVKEAAKDADQSSQAVADSFLAGRAGVGEFLEGFMAQRQRYH 1200 D + +RI P +FP++ P++Q S V H W++ +VVGH DL W +A I IV +I+ E GG + + A P P+ A+ S+ P PQQ Q Q P ++TP + Q+ P S + PSQ DA R +T PAIP+ F EL+ L+ QL +L D L + M + +L DL KGN ++A++N+ +L+ L+D + LK +LH A + A + H L V +AA +AD++S+ +A F G V +F+ F+ R+ YH Sbjct: 57 DSRTLTLRITLPDEFPMQGPMIQTTSRVQHSWLDSQCRVVGHMDLVNWSAHAD--IGRIVVDIVNEFQRSPPAAIGRGGASLSVNPASSTTPIYPGPSTASPLTPSYLQPF--PQQQQSQPPP------SASYTPXXXXXXXXXMTASYQYPAPYASS------------SRGKMPSQQ---------DAAR-----QTQSPAIPAVFPELEALSVNQLEKLVTDRATLKAYIKNMDNVVNFMKLYDDLVKGNKDLAESNLAYEAQLEPLQDAVQELKQQLHVAQE----ALQAKQNQQHQVLVHFQPDLLVARVSKAADEADEASEDIAARFTNGDIDVNQFVAEFLPMRKLYH 371
BLAST of jgi.p|Trimin1|351355 vs. uniprot
Match: W4H350_9STRA (VPS37 C-terminal domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H350_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.720e-15 Identity = 93/347 (26.80%), Postives = 153/347 (44.09%), Query Frame = 1 Query: 202 DGHPVNMRIFFPVKFPVERPVLQLLSTVDHPWVNEYMQVVGHPDLALWRGNAGKPISVIVKEIMIELSGGTASTAGQALPQQPSQRMP--TNAASFAHPSTGPQQWQQQQPSWR---PDERKPNWTPPEGPIGAANGNSGGQFWRPQPSDGSQSGGGRVGGGAAQWSPSQVGAGGGGSSTDAKRVEEKH----RTPIPAIPSRFAELDGLTEAQLRRLAGDGVALAQIVDGMASARGMRELLRDLAKGNAEVAKANMESSRKLDELRDEITALKMELHEAA-ALNPVGVGAGASADHVTLKA----VKEAAKDADQSSQAVADSFLAGRAGVGEFLEGFMAQRQRYH 1200 D + +RI P +FP++ P++Q S V H W++ +V GH DL+ W +A I IV +I+ E G+ PS P T +AS GP PS+ P + + P+ + + P PS + S G A ++ S GA G S + + + +T PAIP+ F EL+ L+ QL +L D L + M + +L DL KGN ++A++N+ +L L+ ++ +LK +LH+A +L+ + H + V +AA +S+ +A F G V +F+ F+ R+ YH Sbjct: 57 DSRTLTLRITLPDEFPMQAPIIQTTSRVQHSWLDSQCRVTGHMDLSTWSAHAD--IGRIVTDIVTEFQRSPPVVIGRGGMSSPSMPPPPITTSASATPMYPGPTSASPLTPSYLQSFPPHATSHQHSQQPPVPS--------LYPPYPSASTASP--STYGYPAPYASSSAGASYGQGSHQQQPPKPQRDVVRQTQSPAIPTVFPELESLSVNQLEKLVTDRATLKAYIKSMDNVVNFMKLYDDLVKGNRDMAESNLGYEAQLAPLQSDVQSLKQQLHQAQESLHAKQTQQRQALVHFQAEPLVARVAQAADXXXXASEEIAARFTNGEIDVSQFVTEFLPTRKLYH 391
BLAST of jgi.p|Trimin1|351355 vs. uniprot
Match: A0A067D4T4_SAPPC (VPS37 C-terminal domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D4T4_SAPPC) HSP 1 Score: 87.8 bits (216), Expect = 3.770e-15 Identity = 93/345 (26.96%), Postives = 147/345 (42.61%), Query Frame = 1 Query: 202 DGHPVNMRIFFPVKFPVERPVLQLLSTVDHPWVNEYMQVVGHPDLALWRGNAGKPISVIVKEIMIELSGGTASTAGQALPQQPSQRMPTNAASFAHPSTGPQQWQQQQPSWRPDERKPNWTPPEGPIGAANGNSGGQFWRPQPSDGSQSGGGRVGGGAAQWSPSQVGAGGGGSSTDAKRVEEKHRTPIPAIPSRFAELDGLTEAQLRRLAGDGVALAQIVDGMASARGMRELLRDLAKGNAEVAKANMESSRKLDELRDEITALKMELH---EAAALNPVGVGAGASA--DHVTLKAVKEAAKDADQSSQAVADSFLAGRAGVGEFLEGFMAQRQRYHRCAARME 1221 D + +RI P +FP++ P++Q S V H W++ +VVGH DLA W +A + IV +I+ E AG R+ + H P Q PS GAA+ + P ++ SQS + ++ + K + T PAIP+ F ELD L+ QL +L D AL + M + +L DL KGNAE+A+ N+ L L+ +I +LK ++ E +L V S V + V +AA + D++++ + F G V +FL F+ R+ YH+ A++E Sbjct: 58 DARSLTLRISLPDEFPMQAPLIQTTSRVQHSWLDAQCRVVGHIDLASWGVHAD--LGRIVNDILSEFQRNPPVVAG---------RVTSTPPPAYHAPVSPAYTQPFYPS---------------SSGAAS------YATPYNNNTSQS---------SSYTREKT-------PPPLKARDPYMHTQTPAIPTSFPELDELSITQLEKLVSDRQALKAYIRNMDAVINFMKLYDDLVKGNAELAEKNLSYEGTLATLQMDIQSLKSQVQAAQEVLSLKQVRQQEILSRVRGDVLVARVTQAADEVDEATEDIGSRFTNGEMDVSQFLAEFLPSRKLYHQRMAKVE 354
BLAST of jgi.p|Trimin1|351355 vs. uniprot
Match: A0A7S4DDS2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDS2_HETAK) HSP 1 Score: 80.5 bits (197), Expect = 2.060e-14 Identity = 41/117 (35.04%), Postives = 65/117 (55.56%), Query Frame = 1 Query: 91 MKHHRLTQLAGLERDIPGIVKRAADGALYEVPVPVGPDGHPVNMRIFFPVKFPVERPVLQLLSTVDHPWVNEYMQVVGHPDLALWRGNAGKPISVIVKEIMIELSGGTASTAGQALP 441 ++ R Q+ L+ +PG+ + + D + +EVPV V MRI+ P FP E+PVLQ+L+ + HPW+N + QV GHP L W + IS +V ++M + + + GQ P Sbjct: 12 LQEQRSQQIESLKTIVPGLKETSTDQSQFEVPVST--PSRTVMMRIYLPANFPNEKPVLQMLAQIRHPWLNTFFQVTGHPMLLSWGPHCN--ISTVVLDVMSQFAAAGDAPQGQQPP 124
BLAST of jgi.p|Trimin1|351355 vs. uniprot
Match: A0A1V9Y5I0_9STRA (VPS37 C-terminal domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y5I0_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 6.190e-14 Identity = 98/348 (28.16%), Postives = 150/348 (43.10%), Query Frame = 1 Query: 199 PDGHPVNMRIFFPVKFPVERPVLQLLSTVDHPWVNEYMQVVGHPDLALWRGNAGKPISVIVKEIMIELSGGTASTAGQALPQQPSQRMPTNAASFAHPSTGPQQWQQQQPSWRPDERKPNW-TPPEGPIGAANGNSGGQFWRPQPSDGSQSGGGRVGGGAAQWSPSQVGAGGGGSSTDAKRVEEKHRTPIPAIPSRFAELDGLTEAQLRRLAGDGVALAQIVDGMASARGMRELLRDLAKGNAEVAKANMESSRKLDELRDEITALKMELHEAAALNPVG------VGAGASADHVTLKAVKEAAKDADQSSQAVADSFLAGRAGVGEFLEGFMAQRQRYHRCAARME 1221 PD + +R+ P FPV+ P++Q S V H W++ +V+GH DL+ W +A + LS ST G L + QR P A A +T P + + P +P + + + P A+ P PS S + P A T K E H T PAIPS F ELD L+ QL +L D AL + M +L DL KGNAE+A+ N+ + L+++I +LK ++ A + + + + AD V + V +AA++ D+ ++ + F G V FL F+ R+ YH A+ E Sbjct: 57 PDTRSLTLRVTLPEDFPVQAPIIQTTSRVQHAWLDTQCRVIGHIDLSSWGVHADVGRIGTFSLMYFHLSDN--STVGDILNEF--QRNPPVMAGRAT-ATPPPPYHSPATTSTPAYSQPFYPSSQQQPPAYAS--------YPSPSTSSPA-------------PYSAYA----RETPPKPREHMH-TQTPAIPSSFPELDELSLTQLEKLVSDRQALKGYIRNMDPVINFMKLYDDLVKGNAELAERNLGFEGTISGLQNDIQSLKSQVQAAQEVLSLKQARQQEILSRVRAD-VLVARVTQAAEEVDEMTEDIGSRFTNGDMDVAAFLAEFLPARKLYHLRMAKTE 372 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351355 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11047 ID=mRNA_11047|Name=jgi.p|Trimin1|351355|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1603bp|location=Sequence derived from alignment at Contig_88:329255..333299+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTCGTGGCTGTTTGGCACCGGTGGCAAGACCAAATCCCCTCGCCATGGback to top protein sequence of jgi.p|Trimin1|351355 >Trimin1|351355|estExt_Genemark1.C_Ctg_880038 ID=Trimin1|351355|estExt_Genemark1.C_Ctg_880038|Name=jgi.p|Trimin1|351355|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=416bp MSWLFGTGGKTKSPRHGQQQGGGSTSDDADMKHHRLTQLAGLERDIPGIVback to top mRNA from alignment at Contig_88:329255..333299+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11047 ID=mRNA_11047|Name=jgi.p|Trimin1|351355|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4045bp|location=Sequence derived from alignment at Contig_88:329255..333299+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_88:329255..333299+ >mRNA_11047 ID=mRNA_11047|Name=jgi.p|Trimin1|351355|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1248bp|location=Sequence derived from alignment at Contig_88:329255..333299+ (Tribonema minus UTEX_B_3156 )back to top |