mRNA_11033 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|337271
Unique NamemRNA_11033
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|337271 vs. uniprot
Match: A0A835YI62_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI62_9STRA)

HSP 1 Score: 927 bits (2397), Expect = 0.000e+0
Identity = 477/477 (100.00%), Postives = 477/477 (100.00%), Query Frame = 1
Query:    1 MVKEAEEAYGFVCARVEAMTRQLVKGEALTALGCCTHAKLRSRLCRVFAGRGCGAVWTAIQLSAVGGRFRGLEPLVAGLAAARDRWAEAAVNGNKAAAKQPKSCEARSAALKALGDRTILSHVLQFASRRSWVFIAGVSSHWRGVYMATCALHFGLAHLLRTAWREAFSSVDMFIAAADAGALDKKEQPALCHQLGRWGTRALLACATGVEFNVSLDGSMLVGAAKSGCPDWFMHLGRLLVKRRLVTLKAAVKAAVAAARCGDNAXXXXXXXXDGSMLGWITSLKLAGMPEWIVAGMAAVAAWRGHLHTLWWVNEHKDDWGVANAVMDCYDLPRKSLEEGASYGCFQRDETAEHFAYYDIIDMAVRAGHWHIVQYVVSEQVACPSGAAIALAVQLRRVDMAKVLLDSLEDIEYERFDDVMPALARERSCPVKFFLLIRARSTFTWSPEFLSEVLTMAEEVQNATLAAWLLSIGAVRP 1431
            MVKEAEEAYGFVCARVEAMTRQLVKGEALTALGCCTHAKLRSRLCRVFAGRGCGAVWTAIQLSAVGGRFRGLEPLVAGLAAARDRWAEAAVNGNKAAAKQPKSCEARSAALKALGDRTILSHVLQFASRRSWVFIAGVSSHWRGVYMATCALHFGLAHLLRTAWREAFSSVDMFIAAADAGALDKKEQPALCHQLGRWGTRALLACATGVEFNVSLDGSMLVGAAKSGCPDWFMHLGRLLVKRRLVTLKAAVKAAVAAARCGDNAXXXXXXXXDGSMLGWITSLKLAGMPEWIVAGMAAVAAWRGHLHTLWWVNEHKDDWGVANAVMDCYDLPRKSLEEGASYGCFQRDETAEHFAYYDIIDMAVRAGHWHIVQYVVSEQVACPSGAAIALAVQLRRVDMAKVLLDSLEDIEYERFDDVMPALARERSCPVKFFLLIRARSTFTWSPEFLSEVLTMAEEVQNATLAAWLLSIGAVRP
Sbjct:    1 MVKEAEEAYGFVCARVEAMTRQLVKGEALTALGCCTHAKLRSRLCRVFAGRGCGAVWTAIQLSAVGGRFRGLEPLVAGLAAARDRWAEAAVNGNKAAAKQPKSCEARSAALKALGDRTILSHVLQFASRRSWVFIAGVSSHWRGVYMATCALHFGLAHLLRTAWREAFSSVDMFIAAADAGALDKKEQPALCHQLGRWGTRALLACATGVEFNVSLDGSMLVGAAKSGCPDWFMHLGRLLVKRRLVTLKAAVKAAVAAARCGDNAXXXXXXXXDGSMLGWITSLKLAGMPEWIVAGMAAVAAWRGHLHTLWWVNEHKDDWGVANAVMDCYDLPRKSLEEGASYGCFQRDETAEHFAYYDIIDMAVRAGHWHIVQYVVSEQVACPSGAAIALAVQLRRVDMAKVLLDSLEDIEYERFDDVMPALARERSCPVKFFLLIRARSTFTWSPEFLSEVLTMAEEVQNATLAAWLLSIGAVRP 477          
BLAST of jgi.p|Trimin1|337271 vs. uniprot
Match: A0A835ZG12_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG12_9STRA)

HSP 1 Score: 427 bits (1097), Expect = 8.060e-142
Identity = 252/476 (52.94%), Postives = 316/476 (66.39%), Query Frame = 1
Query:   16 EEAYGFVCARVEAMTRQLVKGEALTALGCCTHAKLRSRLCRVFAGRGCGAVWTAIQLSAVGGRFRGLEPLVAGLAAARDRWAEAAVNGNKAAAKQPKSCEARSAALKALGDRTILSHVLQFASRRSWVFIAGVSSHWRGVYMATCALHFGLAHLLRTAWREAFSSVDMFIAAADAGALDKKEQPALCHQLGRWGTRALLACATGVEFNVSLDGSMLVGAAKSGCPDWFMHLGRLLVKRRLVTLKAAVKAAVAAARCGDNAXXXXXXXXDGSMLGWITSLKLAGMPEWIVAGMAAVAAWRGHLHTLWWVNEHKDD-WG--VANAVMDCY--DLPRKSLEEGASYGCFQRDE-TAEHFAYYDII-DMAVRAGHWHIVQYVVSEQVACPSGAAIALAVQLRRVDMAKVLLDSLEDIEYERFDDVMPALARERSCPVKFFLLIRARSTFTWSPEFLSEVLTMAEEVQNATLAAWLLSIGA 1422
            E AYG+VC+R EA+ RQL KG    A      A+L             G    A +LSAVGGRFRGLEP++A LAAARD  AE A +       +   C A+     ALGDR IL H+LQF  +RSWV+IAGVS HWRG YMATCA+ FGLAHL RT+WRE  +SV+ F+AAADAGAL++  QPAL HQLGRWG+RAL+ACATG  F+V L G +LVGAA++G  DWF++LG+LLVKR  + ++ A+KAAVAAAR GD+          G ++ WI SLKLAG+P WIVAG+AAVAA  GHL TL W+  H DD WG  +   V++ Y  +LP++S+EEGA+YGCF+ D  T +    Y I+ + A+R+GH HIV Y+ +E         +ALAVQ+ RVDMA+ LL + +    +  +DV+PALARE SCPV  F   RA ST  W  E LS +L  A EVQNA LAAWL SIGA
Sbjct:   91 EAAYGYVCSRAEAIMRQLAKGGPALASPS-ADAELY------------GLHAIATRLSAVGGRFRGLEPILARLAAARDCRAEPAAD-------RTDLCVAQGTPHAALGDRVILGHILQFTGKRSWVYIAGVSPHWRGAYMATCAMQFGLAHLCRTSWREVLTSVETFVAAADAGALEETHQPALQHQLGRWGSRALVACATGAGFDVPLHGPILVGAAETGRADWFVYLGQLLVKRGRLGIEDAIKAAVAAARRGDS----------GEVMAWIASLKLAGVPRWIVAGLAAVAARHGHLATLRWMITHADDCWGFKLGLGVIEAYFDNLPQRSVEEGAAYGCFEPDVMTPDGDGEYHILTETAIRSGHMHIVDYIAAELHEYVIDDTVALAVQIGRVDMAQALLTTWDAAAEDLVEDVLPALAREPSCPVALFEFARAYSTAVWPAEDLSAMLPAANEVQNAPLAAWLRSIGA 536          
BLAST of jgi.p|Trimin1|337271 vs. uniprot
Match: A0A836C7E5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7E5_9STRA)

HSP 1 Score: 420 bits (1079), Expect = 3.100e-140
Identity = 245/473 (51.80%), Postives = 306/473 (64.69%), Query Frame = 1
Query:   16 EEAYGFVCARVEAMTRQLVKGEALTALGCCTHAKLRSRLCRVFAGRGCGAVWTAIQLSAVGGRFRGLEPLVAGLAAARDRWAEAAVNGNKAAAKQPKSCEARSAALKALGDRTILSHVLQFASRRSWVFIAGVSSHWRGVYMATCALHFGLAHLLRTAWREAFSSVDMFIAAADAGALDKKEQPALCHQLGRWGTRALLACATGVEFNVSLDGSMLVGAAKSGCPDWFMHLGRLLVKRRLVTLKAAVKAAVAAARCGDNAXXXXXXXXDGSMLGWITSLKLAGMPEWIVAGMAAVAAWRGHLHTLWWVNEHKDDWG--VANAVMDCYDLPRKSLEEGASYGCFQRDETAEHFA-YYDIIDMAVRAGHWHIVQYVVSEQVACPSGAAIALAVQLRRVDMAKVLLDSLEDIEYERFDDVMPALARERSCPVKFFLLIRARSTFTWSP-EFLSEVLTMAEEVQNATLAAWLLSIGA 1422
            +EAY +VCARVEAM RQL KG           A+L             G    A QLSA+GGRF GLEP++AGLAAAR   AE A       AK+ KSC+A+SAA  ALGDR IL H+LQF S RSW+FIAG+S HWRG YMATCA H G+A L RTAWREA  SVD F AAADAG L K+ Q AL  QLG+WGTR LLACA+G  F+V+L+GSMLV AA+SG PDWF+HLGRLLV R +++ K A+ AAV AARCGD           G MLGW+ SL +  MP+W+V G+A  AA  GHLHTL WV  H  DWG  V +   D + +    ++EG  +GCF++   ++ F  YY+++D AVRAGH HIVQY+V +QVA  S  ++ LAV++  VD+A  L D  +  E++  + +   LA +R+CPV+ F  IRA S   WS  + LS +LT  E   N  LAAWL S+GA
Sbjct:   13 DEAYAYVCARVEAMMRQLAKGGPAAISSPGADAELH------------GLHAIATQLSALGGRFHGLEPILAGLAAARGCHAEPA-------AKKSKSCQAQSAAHTALGDRVILGHILQFTSNRSWLFIAGLSPHWRGAYMATCARHCGVARLFRTAWREALFSVDTFAAAADAGLLRKQHQHALRRQLGKWGTRVLLACASGAGFDVALEGSMLVSAAESGRPDWFIHLGRLLVTRGVLSRKNALLAAVTAARCGDG----------GGMLGWLASLGITEMPDWLVLGLATAAARHGHLHTLRWVVAHARDWGMPVPDDFFDNFAVMSCDMDEGVLFGCFEQLVGSDEFPEYYNLVDTAVRAGHLHIVQYIVGQQVATVSTESVTLAVEMGLVDVAIALQDDWD--EHDAVELMTDVLANDRNCPVELFDNIRASSLPYWSAADNLSRLLTTVEAADNVPLAAWLRSLGA 454          
BLAST of jgi.p|Trimin1|337271 vs. uniprot
Match: A0A836CCY8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCY8_9STRA)

HSP 1 Score: 255 bits (651), Expect = 1.200e-76
Identity = 189/478 (39.54%), Postives = 247/478 (51.67%), Query Frame = 1
Query:    4 VKEAEEAYGFVCARVEAMTRQLVKGEALTALGCCTHAKLRSRLCRVFAGRGCGAVWTAIQLSAVGGRFRGLEPLVAGLAAARDRWAEAAVNGNKAAAKQPKSCEARSAALKALGDRTILSHVLQFASRRSWVFIAGVSSHWRGVYMATCALHFGLAHLLRTAWREAFSSVDMFIAAADAGALDKKEQPALCHQLGRWGTRALLACA----TGVEFNVSLDGSMLVGAAKSGCPDWFMHLGRLLVKRRLVTLKAAVKAAVAAARCGDNAXXXXXXXXDGSMLGWITSLKLAGMPEWIVAGMAAVAAWRGHLHTLWWVNEHKDDWGVANAVMDCYDLPRKSLEEGASYGCFQRD--ETAEHFAYYDIIDMAVRAGHWHIVQYVVSEQVACPSGAAIALAVQLRRVDMAKVLLDSLEDIEYERFDDVMPALARERSCPVKFFLLIRARSTFTWSPEFLSEVLTMAEEVQNATLAAWLLSIG 1419
            ++ A+EA  +  ARV A+ R L K   +T         + + L       G  A+ T  QLSA G  FRGL+ ++  LA       E        AA++ +   ARS+A  AL DR++L H+LQF  RRSW++IAGV  HWRG YMATCA+HFG AHLLRTAWREAFSSVD FIAAADA AL+++ + AL   LGRW T+ +LACA     G   +  L GSML  AA+SG PDWF+HL   LV+R+L+  +   +  +   R G+                W   +K                  R H   L       D+W                L+EG  +GCF  D     E   Y+ + + AVRAGH HIV+Y+V     C S  A+ALA+++ R+D+AK L+ S    E E  DDVMP LAR+R+ PV+ F L        W  E L  VL  A+E  NA L AWL   G
Sbjct:    3 MQPADEACCYASARVGAIMRHLSK--EITERPAAVTPSMDAEL------HGLRAIVT--QLSATGSCFRGLKLVLFQLAVV-----EKCRTAPATAARKSELPMARSSASLALSDRSMLGHILQFVGRRSWLYIAGVGPHWRGTYMATCAMHFGFAHLLRTAWREAFSSVDAFIAAADAAALEERHRHALRRHLGRWRTQEVLACALACAAGAGVDSPLHGSMLASAAESGRPDWFVHLRGQLVRRQLLVWRTPSEQPLR--RRGN----------------WGFDIK------------------RNHFDAL------PDEW----------------LDEGVLHGCFTPDVFHLDEDDKYHILSETAVRAGHLHIVRYIVDAMPRCISADAVALALRMERLDIAKALMRSWRGFEEELMDDVMPMLARQRNSPVELFAL-GWDYIDGWRYETLLMVLRTAQESGNAPLVAWLRKQG 406          
BLAST of jgi.p|Trimin1|337271 vs. uniprot
Match: A0A835Z6P7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6P7_9STRA)

HSP 1 Score: 251 bits (640), Expect = 9.320e-75
Identity = 164/383 (42.82%), Postives = 212/383 (55.35%), Query Frame = 1
Query:  295 KQPKSCEARSAALKALGDRTILSHVLQFASRRSWVFIAGVSSHWRGVYMATCALHFGLAHLLRTAWREAFSSVDMFIAAADAGALDKKEQPALCHQLGRWGTRALLACATGVEFNVSLDGSMLVGAAKSGCPDWFMHLGRLLVKRRL--VTLKAAVKAAVAAARCGDNAXXXXXXXXDGSMLGWITSLKLAGMPEWIVAGMAAVAAWRGHLHTLWWVNEHKDDWGVANAVMDCYDLPRKSLEEGASYGCFQR--DETAEHFAYYDIIDMAVRAGHWHIVQYVVSEQVACPSGAAIALAVQLRRVDMAKVLLD--SLEDIEYERFDDVMPALARERSCPVKFFLLIRARSTFTWSPEFLSEVLTMAEEVQNATLAAWLLSIGAV 1425
            K+P+   A+ A    L D  +L HVLQFA R  W++IAGVS HWRGVYMATCA HFG  HL +TAWRE    V+  I AADAGAL+ ++Q AL  QLGRWGTRA LACATGV F + LDGSMLV AA+SG PDWF+HLG LL +        K  + AA   A  GD          +G ML WI       +P WIV G+A++AA  GHL TL WV +  D W V       +        +  ++G F R  D  A  +A   +++ AVRAG   IV++V+       S   + LA+  R+  +A++LL   S E+    R    + +LA  R C V      R      WSPE L+ ++  AE V+NA +A WL S+  V
Sbjct:   61 KKPRFSSAQGARSAVLDDPLLLGHVLQFAGRSRWLYIAGVSPHWRGVYMATCAQHFGFEHLAKTAWRETLCRVETLIVAADAGALEPRQQRALREQLGRWGTRATLACATGVGFGLELDGSMLVSAARSGRPDWFVHLGNLLKESDDDGFETKHLLAAAXXXAARGD----------EGVMLEWIAQEGSDDLPTWIVPGLASIAARCGHLETLRWVVD-SDCW-VFEVDDGAFVQHIGYHVDADAHGYFTRIWDNGASRYA--TLVETAVRAGRLQIVRWVLDHVDVEQSVDTVILALSSRKPAVARLLLSKWSFEESHASR-SAAVASLAANRFCTVALLQWAREHGMGDWSPETLAIMVASAESVRNAAVATWLRSLDGV 428          
BLAST of jgi.p|Trimin1|337271 vs. uniprot
Match: A0A835ZFI4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFI4_9STRA)

HSP 1 Score: 171 bits (434), Expect = 2.280e-45
Identity = 124/359 (34.54%), Postives = 167/359 (46.52%), Query Frame = 1
Query:  358 LSHVLQFASRRSWVFIAGVSSHWRGVYMATCALHFGLAHLLRTAWREAFSSVDMFIAAADAGAL-DKKEQPALCHQLGRWGTRALLACATGVEFNVSLDGSMLVGAAKSGCPDWFMHLGRLLVKRRLVTLKAAVKAAVAAARCGDNAXXXXXXXXDGSMLGWITSLKLA--GMPEWIVAGMAAVAAWRGHLHTLWWVNEHKDDWGVANAVMDCYD-LPRKSLEEGASYGCFQRDETAEHFAYYDIIDMAVRAGHWHIVQYVVSEQVACPSGAAIALAVQLRRVDMAKVLLDSLEDIEYERFDDVMPALARERSCPVKFFLLIRARSTFTWSPEFLSEVLTMAEEVQNATLAAWLLSIGA 1422
            L  VLQF     W++IAGVS HWR V MATCA   GL HL +T + EA  SV+ F  AADAG L D+     +   LG+ G+R +L+CATG+ F + LD  +L+ AA+SG  +W   +G+L+ + + ++    + AAV+AAR GD          DG MLGWI        GMP+WI AG+A VAA  GH  T+ W  E   D     +  + YD +        A   CF+ D+ +     Y ++D AV+A                                                 D  + A    RS  V  F   R      W PE +SE+LT AE V+N  L AWL S+ A
Sbjct:   55 LKTVLQFEGGGRWLYIAGVSRHWRAVLMATCARSLGLQHLAKTRYTEAVGSVEAFAVAADAGVLNDESSARHIKRALGKRGSRVILSCATGIAFKLELDMHVLLCAAESGDFEWLKLVGKLMQETQALSRFELINAAVSAARSGD----------DGDMLGWILEQDWGEGGMPQWIGAGLATVAARHGHEFTMGWCLEDGVDRFDFPSYAEHYDDIDLDDDWAFAMQNCFEIDQRSAEAHVYGLLDTAVKA-------------------------------------------------DSAVVASLTVRSASVALFKWARENHKGQWFPETISEMLTAAERVKNKPLKAWLKSLQA 354          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|337271 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A835YI62_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZG12_9STRA8.060e-14252.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C7E5_9STRA3.100e-14051.80Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CCY8_9STRA1.200e-7639.54Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z6P7_9STRA9.320e-7542.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZFI4_9STRA2.280e-4534.54Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_88contigContig_88:233624..235234 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|337271|MIX46034_15_44
Hectar predicted targeting categoryother localisation
TranscriptId337593
TrackFilteredModels1
ProteinId337271
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|337271gene_11033Tribonema minus UTEX_B_3156 geneContig_88 233624..235234 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11033_2exon_11033_2Tribonema minus UTEX_B_3156 exonContig_88 233624..234962 -
exon_11033_1exon_11033_1Tribonema minus UTEX_B_3156 exonContig_88 235110..235234 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_11033UTR3_11033Tribonema minus UTEX_B_3156 three_prime_UTRContig_88 233624..233653 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11033CDS_11033Tribonema minus UTEX_B_3156 CDSContig_88 235110..235234 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|337271Trimin1|337271|MIX46034_15_44Tribonema minus UTEX_B_3156 polypeptideContig_88 233654..235234 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11033 ID=mRNA_11033|Name=jgi.p|Trimin1|337271|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1464bp|location=Sequence derived from alignment at Contig_88:233624..235234- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGAAAGAGGCGGAGGAGGCCTATGGCTTCGTATGCGCCAGGGTGGA
AGCGATGACGCGTCAGCTGGTCAAAGGTGAGGCACTGACTGCGCTGGGGT
GCTGCACACATGCGAAATTGCGTTCGAGGCTCTGCCGTGTCTTCGCCGGG
CGCGGATGCGGAGCTGTATGGACTGCCATCCAGTTGAGTGCAGTCGGCGG
GCGCTTCCGCGGTCTGGAGCCATTGGTCGCTGGGCTAGCTGCCGCCAGGG
ATCGCTGGGCAGAGGCAGCAGTCAACGGGAACAAGGCAGCAGCGAAACAG
CCAAAATCCTGTGAAGCAAGGAGCGCAGCACTCAAAGCTTTAGGGGACAG
GACCATCCTGAGCCACGTGTTGCAGTTCGCAAGCCGGCGCAGCTGGGTTT
TCATCGCCGGGGTCAGCTCCCACTGGCGCGGCGTGTACATGGCGACTTGC
GCCTTGCACTTCGGCTTGGCGCACCTGCTCAGAACTGCATGGAGGGAGGC
ATTTTCCAGCGTCGACATGTTCATTGCCGCAGCGGATGCGGGTGCGCTGG
ACAAAAAGGAGCAGCCTGCACTCTGCCACCAGCTGGGCAGGTGGGGAACA
CGGGCGCTTCTAGCCTGCGCCACCGGCGTGGAGTTCAACGTGTCGCTCGA
CGGCTCCATGCTCGTGGGCGCGGCTAAAAGCGGCTGCCCCGACTGGTTCA
TGCACCTTGGCCGCCTTCTCGTCAAGCGACGGCTTGTCACGCTAAAGGCT
GCGGTGAAAGCCGCTGTTGCGGCGGCGCGGTGCGGAGATAACGCTGTTGC
GGCGGCGCGGTGCGGAGATGACGGCAGCATGCTGGGATGGATCACAAGCC
TCAAGCTTGCAGGTATGCCCGAGTGGATCGTGGCAGGCATGGCAGCTGTG
GCCGCATGGCGCGGCCACCTGCACACGCTGTGGTGGGTCAATGAGCACAA
GGATGACTGGGGCGTGGCCAATGCTGTTATGGACTGTTATGATCTGCCGC
GCAAGAGTCTCGAAGAGGGTGCGTCTTACGGCTGTTTTCAGCGAGATGAG
ACAGCCGAGCACTTTGCGTATTACGACATCATAGATATGGCAGTCAGGGC
AGGGCACTGGCACATTGTGCAGTACGTGGTCAGTGAACAGGTTGCTTGCC
CATCTGGTGCTGCTATCGCTTTGGCGGTCCAGCTTAGGCGTGTTGACATG
GCAAAGGTGTTGCTTGATAGTTTGGAGGATATCGAGTACGAGAGGTTTGA
TGACGTAATGCCCGCGCTCGCGCGTGAGCGCAGCTGCCCCGTTAAGTTTT
TTTTGTTGATCAGGGCACGCAGCACATTCACCTGGTCACCAGAGTTCCTG
TCTGAGGTGCTCACAATGGCAGAGGAAGTGCAAAACGCCACCCTAGCGGC
ATGGCTGCTGTCAATTGGCGCAGTGAGGCCCTGATGTGCCTGAAATACAG
CCTAGCAGGCTTTT
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protein sequence of jgi.p|Trimin1|337271

>Trimin1|337271|MIX46034_15_44 ID=Trimin1|337271|MIX46034_15_44|Name=jgi.p|Trimin1|337271|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=478bp
MVKEAEEAYGFVCARVEAMTRQLVKGEALTALGCCTHAKLRSRLCRVFAG
RGCGAVWTAIQLSAVGGRFRGLEPLVAGLAAARDRWAEAAVNGNKAAAKQ
PKSCEARSAALKALGDRTILSHVLQFASRRSWVFIAGVSSHWRGVYMATC
ALHFGLAHLLRTAWREAFSSVDMFIAAADAGALDKKEQPALCHQLGRWGT
RALLACATGVEFNVSLDGSMLVGAAKSGCPDWFMHLGRLLVKRRLVTLKA
AVKAAVAAARCGDNAVAAARCGDDGSMLGWITSLKLAGMPEWIVAGMAAV
AAWRGHLHTLWWVNEHKDDWGVANAVMDCYDLPRKSLEEGASYGCFQRDE
TAEHFAYYDIIDMAVRAGHWHIVQYVVSEQVACPSGAAIALAVQLRRVDM
AKVLLDSLEDIEYERFDDVMPALARERSCPVKFFLLIRARSTFTWSPEFL
SEVLTMAEEVQNATLAAWLLSIGAVRP*
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mRNA from alignment at Contig_88:233624..235234-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11033 ID=mRNA_11033|Name=jgi.p|Trimin1|337271|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1611bp|location=Sequence derived from alignment at Contig_88:233624..235234- (Tribonema minus UTEX_B_3156 )
ATGGTGAAAGAGGCGGAGGAGGCCTATGGCTTCGTATGCGCCAGGGTGGA AGCGATGACGCGTCAGCTGGTCAAAGGTGAGGCACTGACTGCGCTGGGGT GCTGCACACATGCGAAATTGCGTTCGTGAGCATCGAACGATCTTTGCTGC TTCCCTTCGACAGTTCGTTGCAGGCTCTGCGGCAGTAAATTTAAAGGGGT AGAACTCTCTGAACACCATTCTGAAAGAGCCAGTGCGAGGGCTGCTGACC TTTCTCTCTCTTTTTGCCACAGGAGGCTCTGCCGTGTCTTCGCCGGGCGC GGATGCGGAGCTGTATGGACTGCCATCCAGTTGAGTGCAGTCGGCGGGCG CTTCCGCGGTCTGGAGCCATTGGTCGCTGGGCTAGCTGCCGCCAGGGATC GCTGGGCAGAGGCAGCAGTCAACGGGAACAAGGCAGCAGCGAAACAGCCA AAATCCTGTGAAGCAAGGAGCGCAGCACTCAAAGCTTTAGGGGACAGGAC CATCCTGAGCCACGTGTTGCAGTTCGCAAGCCGGCGCAGCTGGGTTTTCA TCGCCGGGGTCAGCTCCCACTGGCGCGGCGTGTACATGGCGACTTGCGCC TTGCACTTCGGCTTGGCGCACCTGCTCAGAACTGCATGGAGGGAGGCATT TTCCAGCGTCGACATGTTCATTGCCGCAGCGGATGCGGGTGCGCTGGACA AAAAGGAGCAGCCTGCACTCTGCCACCAGCTGGGCAGGTGGGGAACACGG GCGCTTCTAGCCTGCGCCACCGGCGTGGAGTTCAACGTGTCGCTCGACGG CTCCATGCTCGTGGGCGCGGCTAAAAGCGGCTGCCCCGACTGGTTCATGC ACCTTGGCCGCCTTCTCGTCAAGCGACGGCTTGTCACGCTAAAGGCTGCG GTGAAAGCCGCTGTTGCGGCGGCGCGGTGCGGAGATAACGCTGTTGCGGC GGCGCGGTGCGGAGATGACGGCAGCATGCTGGGATGGATCACAAGCCTCA AGCTTGCAGGTATGCCCGAGTGGATCGTGGCAGGCATGGCAGCTGTGGCC GCATGGCGCGGCCACCTGCACACGCTGTGGTGGGTCAATGAGCACAAGGA TGACTGGGGCGTGGCCAATGCTGTTATGGACTGTTATGATCTGCCGCGCA AGAGTCTCGAAGAGGGTGCGTCTTACGGCTGTTTTCAGCGAGATGAGACA GCCGAGCACTTTGCGTATTACGACATCATAGATATGGCAGTCAGGGCAGG GCACTGGCACATTGTGCAGTACGTGGTCAGTGAACAGGTTGCTTGCCCAT CTGGTGCTGCTATCGCTTTGGCGGTCCAGCTTAGGCGTGTTGACATGGCA AAGGTGTTGCTTGATAGTTTGGAGGATATCGAGTACGAGAGGTTTGATGA CGTAATGCCCGCGCTCGCGCGTGAGCGCAGCTGCCCCGTTAAGTTTTTTT TGTTGATCAGGGCACGCAGCACATTCACCTGGTCACCAGAGTTCCTGTCT GAGGTGCTCACAATGGCAGAGGAAGTGCAAAACGCCACCCTAGCGGCATG GCTGCTGTCAATTGGCGCAGTGAGGCCCTGATGTGCCTGAAATACAGCCT AGCAGGCTTTT
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Coding sequence (CDS) from alignment at Contig_88:233624..235234-

>mRNA_11033 ID=mRNA_11033|Name=jgi.p|Trimin1|337271|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1434bp|location=Sequence derived from alignment at Contig_88:233624..235234- (Tribonema minus UTEX_B_3156 )
ATGGTGAAAGAGGCGGAGGAGGCCTATGGCTTCGTATGCGCCAGGGTGGA
AGCGATGACGCGTCAGCTGGTCAAAGGTGAGGCACTGACTGCGCTGGGGT
GCTGCACACATGCGAAATTGCGTTCGAGGCTCTGCCGTGTCTTCGCCGGG
CGCGGATGCGGAGCTGTATGGACTGCCATCCAGTTGAGTGCAGTCGGCGG
GCGCTTCCGCGGTCTGGAGCCATTGGTCGCTGGGCTAGCTGCCGCCAGGG
ATCGCTGGGCAGAGGCAGCAGTCAACGGGAACAAGGCAGCAGCGAAACAG
CCAAAATCCTGTGAAGCAAGGAGCGCAGCACTCAAAGCTTTAGGGGACAG
GACCATCCTGAGCCACGTGTTGCAGTTCGCAAGCCGGCGCAGCTGGGTTT
TCATCGCCGGGGTCAGCTCCCACTGGCGCGGCGTGTACATGGCGACTTGC
GCCTTGCACTTCGGCTTGGCGCACCTGCTCAGAACTGCATGGAGGGAGGC
ATTTTCCAGCGTCGACATGTTCATTGCCGCAGCGGATGCGGGTGCGCTGG
ACAAAAAGGAGCAGCCTGCACTCTGCCACCAGCTGGGCAGGTGGGGAACA
CGGGCGCTTCTAGCCTGCGCCACCGGCGTGGAGTTCAACGTGTCGCTCGA
CGGCTCCATGCTCGTGGGCGCGGCTAAAAGCGGCTGCCCCGACTGGTTCA
TGCACCTTGGCCGCCTTCTCGTCAAGCGACGGCTTGTCACGCTAAAGGCT
GCGGTGAAAGCCGCTGTTGCGGCGGCGCGGTGCGGAGATAACGCTGTTGC
GGCGGCGCGGTGCGGAGATGACGGCAGCATGCTGGGATGGATCACAAGCC
TCAAGCTTGCAGGTATGCCCGAGTGGATCGTGGCAGGCATGGCAGCTGTG
GCCGCATGGCGCGGCCACCTGCACACGCTGTGGTGGGTCAATGAGCACAA
GGATGACTGGGGCGTGGCCAATGCTGTTATGGACTGTTATGATCTGCCGC
GCAAGAGTCTCGAAGAGGGTGCGTCTTACGGCTGTTTTCAGCGAGATGAG
ACAGCCGAGCACTTTGCGTATTACGACATCATAGATATGGCAGTCAGGGC
AGGGCACTGGCACATTGTGCAGTACGTGGTCAGTGAACAGGTTGCTTGCC
CATCTGGTGCTGCTATCGCTTTGGCGGTCCAGCTTAGGCGTGTTGACATG
GCAAAGGTGTTGCTTGATAGTTTGGAGGATATCGAGTACGAGAGGTTTGA
TGACGTAATGCCCGCGCTCGCGCGTGAGCGCAGCTGCCCCGTTAAGTTTT
TTTTGTTGATCAGGGCACGCAGCACATTCACCTGGTCACCAGAGTTCCTG
TCTGAGGTGCTCACAATGGCAGAGGAAGTGCAAAACGCCACCCTAGCGGC
ATGGCTGCTGTCAATTGGCGCAGTGAGGCCCTGA
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