mRNA_1102 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|1071
Unique NamemRNA_1102
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|1071 vs. uniprot
Match: A0A835ZHA8_9STRA (Ribosomal protein L7/L12 C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHA8_9STRA)

HSP 1 Score: 388 bits (996), Expect = 1.060e-133
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 3 
Query:  216 MASNVAAAARRAALSAVARPLLRPRAASSTQRHFAQAQHRLREPIGSGALHCVRRHLCSEPAQTKAEEKPEEQHNAFPDEPXXXXXNLITGPTDEVKDLCDQLLELSVIDFIQFMKLYQRRTGLTDEMVNSYGQANGXXXXXXXXXXXXXEAPKEEKSIFDVKLVSFDAKAKIKVIKEVRTVTGLGLKEAKDLVEGAPKILKREMAKADAEKLLKAFKDIGAECTMD 896
            MASNVAAAARRAALSAVARPLLRPRAASSTQRHFAQAQHRLREPIGSGALHCVRRHLCSEPAQTKAEEKPEEQHNAFPDEPXXXXXNLITGPTDEVKDLCDQLLELSVIDFIQFMKLYQRRTGLTDEMVNSYGQANGXXXXXXXXXXXXXEAPKEEKSIFDVKLVSFDAKAKIKVIKEVRTVTGLGLKEAKDLVEGAPKILKREMAKADAEKLLKAFKDIGAECTMD
Sbjct:    1 MASNVAAAARRAALSAVARPLLRPRAASSTQRHFAQAQHRLREPIGSGALHCVRRHLCSEPAQTKAEEKPEEQHNAFPDEPXXXXXNLITGPTDEVKDLCDQLLELSVIDFIQFMKLYQRRTGLTDEMVNSYGQANGXXXXXXXXXXXXXEAPKEEKSIFDVKLVSFDAKAKIKVIKEVRTVTGLGLKEAKDLVEGAPKILKREMAKADAEKLLKAFKDIGAECTMD 227
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BLAST of jgi.p|Trimin1|1071 vs. uniprot
Match: A0A835Z8S1_9STRA (Ribosomal protein L7/L12 C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8S1_9STRA)

HSP 1 Score: 148 bits (373), Expect = 6.250e-41
Identity = 94/122 (77.05%), Postives = 106/122 (86.89%), Query Frame = 3 
Query:  537 VIDFIQFMKLYQRRTGLTDEMV--NSYGQANGXXXXXXXXXXXXXEAPKEEKSIFDVKLVSFDAKAKIKVIKEVRTVTGLGLKEAKDLVEGAPKILKREMAKADAEKLLKAFKDIGAECTMD 896
            +ID  QF+ LYQ++TG+T++MV  N  G    XXXXXXXXXXXXX  P EEKS+FDVKLVSFDAKAKIKVIKEVRTVTGLGLKEAK+LVEGAPK+LK+EMAKADAEKLLK FKD+GAEC MD
Sbjct:    1 MIDLKQFINLYQKKTGITEDMVSANMLGGXXXXXXXXXXXXXXXXXXPVEEKSVFDVKLVSFDAKAKIKVIKEVRTVTGLGLKEAKELVEGAPKMLKKEMAKADAEKLLKVFKDLGAECVMD 122
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BLAST of jgi.p|Trimin1|1071 vs. uniprot
Match: A0A7S2WIW3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WIW3_9STRA)

HSP 1 Score: 110 bits (275), Expect = 4.430e-25
Identity = 73/144 (50.69%), Postives = 100/144 (69.44%), Query Frame = 3 
Query:  489 PTDEVKDLCDQLLELSVIDFIQFMKLYQRRTGLTDE----MVNSYGQANGXXXXXXXXXXXXXEAPKEE----KSIFDVKLVSFDAKAKIKVIKEVRTVTGLGLKEAKDLVEGAPKILKREMAKADAEKLLKAFKDIGAECTMD 896
            P+++V+ LCDQL EL+VI+  Q + L++ + GLT      M+ +      XX    XXXXXX ++ +EE    K  FD+KLV FD KAKIKVIKEVR +TGLGLKEAK+LVEGAPKI+K+E++KAD + L++  K  GAE  ++
Sbjct:   94 PSEKVQALCDQLCELNVIEMNQLVTLFKDKVGLTGADIMPMMGAXXXXXXXXAMGGXXXXXXDDSAEEEAAPEKEFFDLKLVGFDDKAKIKVIKEVRAITGLGLKEAKELVEGAPKIVKKEVSKADVDGLVEKLKAAGAEVALE 237
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BLAST of jgi.p|Trimin1|1071 vs. uniprot
Match: A0A3M6VRL1_9STRA (Uncharacterized protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VRL1_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.130e-24
Identity = 62/132 (46.97%), Postives = 86/132 (65.15%), Query Frame = 3 
Query:  492 TDEVKDLCDQLLELSVIDFIQFMKLYQRRTGLTDE--MVNSYGQANGXXXXXXXXXXXXXEAPKEEKSIFDVKLVSFDAKAKIKVIKEVRTVTGLGLKEAKDLVEGAPKILKREMAKADAEKLLKAFKDIGA 881
            T +V+ + DQ+LEL++I+  +     Q + G+ +    V   G A G             E PKEEK+ FDVKL SFDAK+KIKVIKEVR +TGLGLKEAK+LVEGAP  LK+++ K +A++L++  K +GA
Sbjct:   50 TPKVQTVLDQILELNMIEIAELSHAIQTKFGIAESAFQVGMGGGAGGNAAPAA-------EEPKEEKTAFDVKLASFDAKSKIKVIKEVRAITGLGLKEAKELVEGAPSTLKKDVKKEEADELIEKLKAVGA 174
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BLAST of jgi.p|Trimin1|1071 vs. uniprot
Match: A0A8K1FI50_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FI50_PYTOL)

HSP 1 Score: 103 bits (256), Expect = 5.160e-23
Identity = 59/135 (43.70%), Postives = 86/135 (63.70%), Query Frame = 3 
Query:  492 TDEVKDLCDQLLELSVIDFIQFMKLYQRRTGLTDEMVNSYGQANGXXXXXXXXXXXXXEAPKEEKSIFDVKLVSFDAKAKIKVIKEVRTVTGLGLKEAKDLVEGAPKILKREMAKADAEKLLKAFKDIGAECTMD 896
            T +V+++ DQ+LEL++++  +     Q++  + D    + G   G             E  KEEK+ FDVKL SFDAK+KIKVIKEVR +TGLGLKEAK+LVEG P +LK+++ K +AE L+   K++GA   M+
Sbjct:   47 TPKVQNVLDQILELNMVEIFELSGAIQQKFNIPDAAF-AMGAGGGAAAPAA-------EEVKEEKTQFDVKLASFDAKSKIKVIKEVRAITGLGLKEAKELVEGVPSVLKKDVKKEEAEALIAQLKEVGAVLEME 173
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BLAST of jgi.p|Trimin1|1071 vs. uniprot
Match: A0A6T7BM22_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7BM22_9STRA)

HSP 1 Score: 101 bits (252), Expect = 2.060e-22
Identity = 65/141 (46.10%), Postives = 91/141 (64.54%), Query Frame = 3 
Query:  495 DEVKDLCDQLLELSVIDFIQFMKLYQRRTGLTDEMVNSYGQANGXXXXXXXXXXXXXEAPKEE-------KSIFDVKLVSFDAKAKIKVIKEVRTVTGLGLKEAKDLVEGAPKILKREMAKADAEKLLKAFKDIGAECTMD 896
            + V+ L D+L  L+VI+  Q +K ++ + GLT   V   G   G       XXXXXX             K  FD+KL+ FD K+KIKVIKEVR ++GLGLKEAK+LVEGAPK++K+++AKADAE+L++  K +GAE  ++
Sbjct:   35 ENVQKLVDELCSLNVIEMNQLVKSFKDKVGLTGADVMPMGMPMGMPAMGAAXXXXXXXXXXXXXXXXXXXKEFFDLKLLGFDDKSKIKVIKEVRAISGLGLKEAKELVEGAPKVVKKDLAKADAEELIEKLKAVGAEVALE 175
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BLAST of jgi.p|Trimin1|1071 vs. uniprot
Match: K3W6J6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6J6_GLOUD)

HSP 1 Score: 101 bits (252), Expect = 2.060e-22
Identity = 68/135 (50.37%), Postives = 93/135 (68.89%), Query Frame = 3 
Query:  477 LITGPTDEVKDLCDQLLELSVIDFIQFMKLYQRRTGLTDEMVNSYGQANGXXXXXXXXXXXXXEAPKEEKSIFDVKLVSFDAKAKIKVIKEVRTVTGLGLKEAKDLVEGAPKILKREMAKADAEKLLKAFKDIGA 881
            L T P  +V+ + DQ+L+L++++ ++     Q +  + D        A      XXXXXXXXX  PKEEK+ FDVKL SFDAK+KIKVIKEVR +TGLGLKEAK+LVEGAP +LK+++ K +AE L+   K++GA
Sbjct:   45 LATSP--KVQAVLDQILDLNMMEIVELSSAIQEKFNIPDS-------AFSGGFGXXXXXXXXXXXPKEEKTQFDVKLASFDAKSKIKVIKEVRAITGLGLKEAKELVEGAPSVLKKDVKKDEAEALIAQLKEVGA 170
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BLAST of jgi.p|Trimin1|1071 vs. uniprot
Match: A0A8J2X4X0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X4X0_9STRA)

HSP 1 Score: 100 bits (249), Expect = 4.560e-22
Identity = 67/138 (48.55%), Postives = 98/138 (71.01%), Query Frame = 3 
Query:  492 TDEVKDLCDQLLELSVIDFIQFMKLYQRRTGLTDEMVNSYGQANGXXXXXXXXXXXXXEAPKEE---KSIFDVKLVSFDAKAKIKVIKEVRTVTGLGLKEAKDLVEGAPKILKREMAKADAEKLLKAFKDIGAECTMD 896
            +++V+ +CD + +L+V++  +F+ L++ R GL+D  +        XXXXXXXXXXXXX         K  FD+KL SFDAKAKIKVIKEVR +TGLGLKEAK++VEGAP +LK+E+ K +AE+++K   ++GA   ++
Sbjct:   30 SEKVEKICDDVCQLNVLELKEFLDLFKERAGLSDADLQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFFDIKLTSFDAKAKIKVIKEVRALTGLGLKEAKEVVEGAPSVLKKEVKKDEAEEIVKKLTELGAAAELE 167
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BLAST of jgi.p|Trimin1|1071 vs. uniprot
Match: A0A0P1AIP0_PLAHL (Ribosomal protein l7 l12 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AIP0_PLAHL)

HSP 1 Score: 99.8 bits (247), Expect = 1.060e-21
Identity = 58/130 (44.62%), Postives = 84/130 (64.62%), Query Frame = 3 
Query:  492 TDEVKDLCDQLLELSVIDFIQFMKLYQRRTGLTDEMVNSYGQANGXXXXXXXXXXXXXEAPKEEKSIFDVKLVSFDAKAKIKVIKEVRTVTGLGLKEAKDLVEGAPKILKREMAKADAEKLLKAFKDIGA 881
            T +V+ + +Q+LEL++I+  +     Q + G++ E     G   G             +  KEEK+ FDVKL SFDAK+KIKVIKEVR +TGLGLKEAK+LVEGAP  LK+++ K +A++L++  K +GA
Sbjct:   46 TPKVQTVLNQILELNMIEIAELSHAIQAKFGIS-ESAFQVGMGGGGTGAVSAA-----QEVKEEKTAFDVKLASFDAKSKIKVIKEVRAITGLGLKEAKELVEGAPSTLKKDVKKEEADELIEKLKAVGA 169
[Close]
BLAST of jgi.p|Trimin1|1071 vs. uniprot
Match: A0A2D4BXQ9_PYTIN (50S ribosomal protein L7/L12, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXQ9_PYTIN)

HSP 1 Score: 99.4 bits (246), Expect = 1.340e-21
Identity = 67/133 (50.38%), Postives = 93/133 (69.92%), Query Frame = 3 
Query:  498 EVKDLCDQLLELSVIDFIQFMKLYQRRTGLTDEMVNSYGQANGXXXXXXXXXXXXXEAPKEEKSIFDVKLVSFDAKAKIKVIKEVRTVTGLGLKEAKDLVEGAPKILKREMAKADAEKLLKAFKDIGAECTMD 896
            +VK + DQ++EL++I+  +     Q++  + D    ++  A GXXXXXXXXXX      KEEK+ FDVKL SFDAK KIKVIKE+R +TGLGLKEAK+LVEG P +LK+++ K +AE L+   K++GA   M+
Sbjct:   46 KVKSVLDQIVELNMIEIFELSSAIQQKFNIPDA---AFSMAAGXXXXXXXXXXA-----KEEKTQFDVKLASFDAKNKIKVIKEIRAITGLGLKEAKELVEGVPSVLKKDLKKDEAEALIAQLKEVGAVGEME 170
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|1071 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZHA8_9STRA1.060e-133100.00Ribosomal protein L7/L12 C-terminal domain-contain... [more]
A0A835Z8S1_9STRA6.250e-4177.05Ribosomal protein L7/L12 C-terminal domain-contain... [more]
A0A7S2WIW3_9STRA4.430e-2550.69Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A3M6VRL1_9STRA2.130e-2446.97Uncharacterized protein n=2 Tax=Peronosporaceae Ta... [more]
A0A8K1FI50_PYTOL5.160e-2343.70Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6T7BM22_9STRA2.060e-2246.10Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
K3W6J6_GLOUD2.060e-2250.37Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8J2X4X0_9STRA4.560e-2248.55Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A0P1AIP0_PLAHL1.060e-2144.62Ribosomal protein l7 l12 n=1 Tax=Plasmopara halste... [more]
A0A2D4BXQ9_PYTIN1.340e-2150.3850S ribosomal protein L7/L12, putative n=1 Tax=Pyt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_1contigContig_1:1219032..1223132 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|1071|CE1070_210
Description50S ribosomal protein L7 L12. Source PGD
COG categoryJ
Max annot lvl121069|Pythiales
EggNOG OGsCOG0222@1|root,KOG1715@2759|Eukaryota,1MHMZ@121069|Pythiales
Evalue9.2e-26
Seed ortholog36331.EPrPI00000016322
Hectar predicted targeting categorymitochondrion
TranscriptId1393
TrackFilteredModels1
ProteinId1071
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|1071gene_1102Tribonema minus UTEX_B_3156 geneContig_1 1219032..1223132 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|1071Trimin1|1071|CE1070_210Tribonema minus UTEX_B_3156 polypeptideContig_1 1219105..1222917 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_1102_5exon_1102_5Tribonema minus UTEX_B_3156 exonContig_1 1219032..1219221 -
exon_1102_4exon_1102_4Tribonema minus UTEX_B_3156 exonContig_1 1219975..1219977 -
exon_1102_3exon_1102_3Tribonema minus UTEX_B_3156 exonContig_1 1220183..1220224 -
exon_1102_2exon_1102_2Tribonema minus UTEX_B_3156 exonContig_1 1221845..1222081 -
exon_1102_1exon_1102_1Tribonema minus UTEX_B_3156 exonContig_1 1222633..1223132 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_1102UTR3_1102Tribonema minus UTEX_B_3156 three_prime_UTRContig_1 1219032..1219104 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_1102CDS_1102Tribonema minus UTEX_B_3156 CDSContig_1 1222633..1222917 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_1102UTR5_1102Tribonema minus UTEX_B_3156 five_prime_UTRContig_1 1222918..1223132 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_1102 ID=mRNA_1102|Name=jgi.p|Trimin1|1071|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=972bp|location=Sequence derived from alignment at Contig_1:1219032..1223132- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCGTAGAGTGCTTCGGAGCTAGATTGAGTCGAGAGCATTGCACCCGCGAG
TCGTCGCGGCTACCGAATCGACAAGTTTACCGCGCCGATCTTTGCTGGGC
TGACAGCAAGTCACGCTCACCCACACCAAGGCTCGCAAGCCACAAAGGTG
TGCATCATCGGTGAAGCGGCAGCTATCGCACTGTAGGGGCGGGGCTGTAG
CATAGCTTCTTTAGAATGGCATCGAACGTAGCGGCCGCCGCGCGCAGAGC
GGCTCTGAGTGCAGTGGCCCGGCCGCTACTGCGGCCGCGAGCCGCTTCTT
CCACGCAGAGGCATTTCGCTCAGGCTCAACATCGGTTGCGCGAACCCATT
GGGAGCGGCGCGCTGCACTGCGTTAGGCGCCATCTATGCAGTGAGCCTGC
GCAAACTAAAGCCGAGGAGAAGCCGGAGGAGCAGCATAATGCGTTCCCAG
ACGAGCCTCCTCCACCCCCTCCCAACTTGATCACGGGACCGACTGACGAG
GTCAAGGACCTCTGCGACCAGCTCCTGGAGCTCAGCGTCATCGACTTCAT
CCAGTTCATGAAGCTGTACCAGCGGCGCACCGGTCTCACGGATGAAATGG
TGAACTCGTACGGGCAGGCGAACGGGGGGGGCGGCGGCGGCGGCGGCGGC
GCGGCGGCGGCCGCGGAGGCGCCGAAGGAGGAGAAGTCGATCTTCGACGT
GAAACTCGTGAGCTTTGACGCCAAGGCTAAGATCAAGGTCATCAAGGAGG
TGCGGACGGTGACGGGGCTGGGGCTGAAGGAGGCGAAGGATCTGGTGGAG
GGGGCCCCCAAGATCCTCAAGAGGGAGATGGCCAAGGCCGACGCGGAGAA
GCTCCTCAAGGCGTTCAAGGACATTGGCGCGGAGTGCACGATGGACTAGC
GGCAGCGGCGCAACGCTCAGCATCATCACACAGACATTGCCACAATAGGG
TATGTATGTACCTGTCCACATA
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protein sequence of jgi.p|Trimin1|1071

>Trimin1|1071|CE1070_210 ID=Trimin1|1071|CE1070_210|Name=jgi.p|Trimin1|1071|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=228bp
MASNVAAAARRAALSAVARPLLRPRAASSTQRHFAQAQHRLREPIGSGAL
HCVRRHLCSEPAQTKAEEKPEEQHNAFPDEPPPPPPNLITGPTDEVKDLC
DQLLELSVIDFIQFMKLYQRRTGLTDEMVNSYGQANGGGGGGGGGAAAAA
EAPKEEKSIFDVKLVSFDAKAKIKVIKEVRTVTGLGLKEAKDLVEGAPKI
LKREMAKADAEKLLKAFKDIGAECTMD*
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mRNA from alignment at Contig_1:1219032..1223132-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_1102 ID=mRNA_1102|Name=jgi.p|Trimin1|1071|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4101bp|location=Sequence derived from alignment at Contig_1:1219032..1223132- (Tribonema minus UTEX_B_3156 )
GCGTAGAGTGCTTCGGAGCTAGATTGAGTCGAGAGCATTGCACCCGCGAG
TCGTCGCGGCTACCGAATCGACAAGTTTACCGCGCCGATCTTTGCTGGGC
TGACAGCAAGTCACGCTCACCCACACCAAGGCTCGCAAGCCACAAAGGTG
TGCATCATCGGTGAAGCGGCAGCTATCGCACTGTAGGGGCGGGGCTGTAG
CATAGCTTCTTTAGAATGGCATCGAACGTAGCGGCCGCCGCGCGCAGAGC
GGCTCTGAGTGCAGTGGCCCGGCCGCTACTGCGGCCGCGAGCCGCTTCTT
CCACGCAGAGGCATTTCGCTCAGGCTCAACATCGGTTGCGCGAACCCATT
GGGAGCGGCGCGCTGCACTGCGTTAGGCGCCATCTATGCAGTGAGCCTGC
GCAAACTAAAGCCGAGGAGAAGCCGGAGGAGCAGCATAATGCGTTCCCAG
ACGAGCCTCCTCCACCCCCTCCCAACTTGATCACGGGACCGACTGACGAG
GTATGGACAGCTTCATCGGACCCTAAATTGACTGTAGTTAGCACCTGCGC
AATGGCAACACACACTCTGCACGCTTTCGTTTGAATCGGTCAGCGGTTGC
AAGACAAACCGTGTTCAGCATCAGTTCCAGCATTGATCCTACATACTGCT
GCAGCTGTGTTCAGAAGTGGCAGACTAGCACCGCCAGACAGAGCAGGTCT
CTGTTGAGCAGCAGCGCGCAAGTGGTGCTGCAGTTCTCAAATCCAGTCTT
TGCTGAGCATGCACCAGTCAAAGTCACAGTAATCAGCGGTGAGCACATGG
CCATGGATAGCCATTGCGTGGGTCACTGCTAGAGGCAAAGCCGCTGGGCA
AGCGGGAAGCTGCCAGCACAGGGCGGCAGGCTTTGCAGGCTCCATGGCGC
CCACATCCACCGACCACCCAATGACCTGTGCACGCCGCTCAGCGCGCGTG
CCAGAAGACTCTTGTTTCTGTAAACGACAGGCACCAGTCAACTGCGAGAC
TGCCCTTTAAGCCGTTTCACAAGTGCATACATGCGCCCGGCTCTCCCGCA
GGTCAAGGACCTCTGCGACCAGCTCCTGGAGCTCAGCGTCATCGACTTCA
TCCAGTTCATGAAGCTGTACCAGCGGCGCACCGGTCTCACGGATGAAATG
GTGAACTCGTACGGGCAGGCGAACGGGGGGGGCGGCGGCGGCGGCGGCGG
CGCGGCGGCGGCCGCGGAGGCGCCGAAGGAGGAGAAGTCGATCTTCGACG
TGAAACTCGTGAGCTTTGACGCCAAGGCTAAGATCAAGGTGAGCGTGGAC
TCGGGGAGAGGGTGGCTCTCGAGGAGTTGACGAGCTTATAGGGTTCCGCT
TGCGATATAGAGTTCCACTTTAAAAAAGCAGCTGTTTGAGCGAGCAGGCG
CTGGCGGCAGAGAAGACGGCGCCATCTTGTCTCGAATGCTGTGCGTGGCT
TCTGCGACTGCGCACACACGGGGGCTTTCTGACAGACGTATACGTGACCG
CTTGTAAGTTTTGGTTAGGTGACCGGGTTTGCCAGCAGTCAGCGTTAGGG
TGAGGGGCTGACTGTGCTGACAGGCCGATGGGAGCTGCTCACGGCCAGCC
ACTTCAACATAGCTTGGCGCCTTCTGCTGCTAATGAGCATTGAACCAGAC
ATTCGGAAACGGGCTGGGGCAACGCTCCCTTGCTGGCTGCGAAAGCGGAG
CGCGGCGGCCGCGCTGCGCACCATGTGCTGCTGCGAGCATTGCAGGCATG
TAACTGACACGTTATCGCTGTGCGTAGAGCGCACGTGAGCGCGCCGACAG
CAGACACGCTGCCCACGAGAAAGGCAGCCGATGCTGAAGTGCTGCGTGCA
CTTGCGTTGTAGAGCAGGTAGGGGGGGGGGGGGGGGGGGGGGGGCGCAGT
CATGGCGCACCGTGCGGCAGTGCTCTGCAGAGCAGCGCCCTGGGATGACC
ATCAGGACTCTAGAGGTCACACAAATAGCTGTTTCCGACATGGGGCCCGA
TGCAGTGCGCCACTCCATGGTGCCCATGGGCAGTGGCAGCACCGTGTGCG
AATGATTGGATGTGTACAGGACAAGTTGAAGTTTGACCCTCCCAACATGC
GGCCCGATCCTGGCCGCTTGCTGGTACCAGGTCAAGGACGCAGTGCCACG
GCAAATGCGCTTCTCGAGGGCACTGTGGTGCATCAGTTGCTGCCGACGGC
AAGGGCACAGCGTTGACGACCGTCGCGCCTTGGAGGTTCAATGTTGAGGG
TCAGGTTGCCACGGCGGAACACAGCAGGGCCGGGGCGAGCCTCAGGATGG
GTGATCAGCAGCAATCACGGGCTCTGTGACAGGCTTTCGTTGAGCACTGT
TGCTCACTGCCGAGAGGCAACGGCTGTGAGGCTCGACGTCACCTAGTACA
AGCTGATGTGTACTTCAAGTCTGTGCAACTTCGAGTTAGCCACACTCAAA
GTGGCACGACAGGGGCTGCAATGAGTACTGCACACACGCAGCATTTGTCA
GCGTCGCGACGGCGCTGATTGCAGCGCAAGATTTGGACCTCTCTGTAAAC
ACACCTGTCTGGCGAAAAGACGTCCAGCAAGTATGAACCGGCCCGCGGCT
CCTTCCCCCTCGCAGTTTGCGCACGATCACTTACGCGATGACATCTATAC
TTTCTCTAATGATCAGATATAGAGAGGTGCATATATTTGAGTGGTTGTCA
TTGAGACAGTTTCAGACTATCACACGACATGTAGATTCCGTACAGCAAGC
TTAGATACCATTCATCTGGGCTTTTTCACGCCCTGAGCGAGAATCAATAG
AAAGTACATGTATACATACATACGCCTGCTTGACGAGCATCACCTTCAGT
GCATCAACGCTCAACCTCCCATCGTTATCGCCTGCTCTGCCGCCCCATGC
GCCTGCAGGTCATCAAGGAGGTGCGGACGGTGACGGGGCTGGGGCTGAAG
GTACGTGCGGCACGCCGTTTCAACGGGCGAAACTGTCGTCCCGCCGCACT
TGCCGCTGTGCTTGCCCTCGCGACTGCGTCTGCGTCTGCAAGATCTGATG
TTGCGCAGCACGGCTCATCCAAATGCCACCGCTCCCGTGCAGCGGCGGCG
CGTGTGCCGCGTTCTGTGTACTGTCGGTGACTTCAGTCACAACCAATGTT
GAGAGGAGGTATGATGGTGTAAGGAAGGCACGGATGCGTTCACTGGAGAT
GCCCGCCAAAGGCGCATTCGCGAGCATGCATCTGGCACAGCGTGCGACAG
TCTTCGCCGTGCGTGCGTGCGTTGCCTGGTCTTGAGGTTGAAGTCAACGA
CACGCCCGCTGGGCCAGGGTCCCTCACACAAGCACGTTGCCTTACAGTGC
GGCGACCCCATCCATTGCTCTGGTTTGTCATGACGTGGCCACGGGGCATT
GTGCGGTGGTGTCAACACAAAGCAGCCAACACACAAGGCGCAGCCCCTGG
CACCTCCTCTACTGCGCTAGAAAGCCTGTGCTGCTGGGTACTTGAACATG
CGGCATCAGTTGCGCGCAGCCCAGTCGCTGTGCGTTCGGCAGTCACTTAA
GGCCTGGAGGCCATCGTCCTCGTGCGCATGATGAGGCGGTGACCACAGAC
CTGCGGGACGTGCGTGCATACCTGCGTACCTGCCAAGCTTAGGGTCAGGG
TTAGGGTTAGGTAATTTTCATGGCGTCACAAGGTCATGTGGCGCAAAGGC
CGGCGAGCGTCGTCTCGCCATTCCAGAGCCGGGCACAGCACACAAACATA
CAGAGCACACTAGATCAACCGCTTGCTCCAGATTTAGATGTACATAGTCC
ACTCGCTGGCATTTGACTGGGGGGTTGGACCCCCCTTAGACCAAGGTAAC
CCACTGCTATTGGGCCCACCGACCCCCCACCCGCCCCCCCCTCTCTTGGC
CTGCGCAGGAGGCGAAGGATCTGGTGGAGGGGGCCCCCAAGATCCTCAAG
AGGGAGATGGCCAAGGCCGACGCGGAGAAGCTCCTCAAGGCGTTCAAGGA
CATTGGCGCGGAGTGCACGATGGACTAGCGGCAGCGGCGCAACGCTCAGC
ATCATCACACAGACATTGCCACAATAGGGTATGTATGTACCTGTCCACAT
A
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Coding sequence (CDS) from alignment at Contig_1:1219032..1223132-

>mRNA_1102 ID=mRNA_1102|Name=jgi.p|Trimin1|1071|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=684bp|location=Sequence derived from alignment at Contig_1:1219032..1223132- (Tribonema minus UTEX_B_3156 )
ATGGCATCGAACGTAGCGGCCGCCGCGCGCAGAGCGGCTCTGAGTGCAGT
GGCCCGGCCGCTACTGCGGCCGCGAGCCGCTTCTTCCACGCAGAGGCATT
TCGCTCAGGCTCAACATCGGTTGCGCGAACCCATTGGGAGCGGCGCGCTG
CACTGCGTTAGGCGCCATCTATGCAGTGAGCCTGCGCAAACTAAAGCCGA
GGAGAAGCCGGAGGAGCAGCATAATGCGTTCCCAGACGAGCCTCCTCCAC
CCCCTCCCAACTTGATCACGGGACCGACTGACGAGGTCAAGGACCTCTGC
GACCAGCTCCTGGAGCTCAGCGTCATCGACTTCATCCAGTTCATGAAGCT
GTACCAGCGGCGCACCGGTCTCACGGATGAAATGGTGAACTCGTACGGGC
AGGCGAACGGGGGGGGCGGCGGCGGCGGCGGCGGCGCGGCGGCGGCCGCG
GAGGCGCCGAAGGAGGAGAAGTCGATCTTCGACGTGAAACTCGTGAGCTT
TGACGCCAAGGCTAAGATCAAGGTCATCAAGGAGGTGCGGACGGTGACGG
GGCTGGGGCTGAAGGAGGCGAAGGATCTGGTGGAGGGGGCCCCCAAGATC
CTCAAGAGGGAGATGGCCAAGGCCGACGCGGAGAAGCTCCTCAAGGCGTT
CAAGGACATTGGCGCGGAGTGCACGATGGACTAG
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