mRNA_11016 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|351342
Unique NamemRNA_11016
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|351342 vs. uniprot
Match: A0A836C895_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C895_9STRA)

HSP 1 Score: 685 bits (1767), Expect = 1.210e-245
Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 1
Query:    1 MASTLVHPKTLIVTNTVDPASVVMKDAVLARQGWTPMQGGTQHRELPMRAWEHRAGNIWMVCLEDSMIRADNIDEAFTSSHGVSSLTDVIFLSRHAAASGKPSLTCHPIGLPNPTCEPVSGGVPGKCPPPNPRMASCLRELAVATEAAGLSSEFEVTFETTHHGPWLQTPAMFCEIGSTEEHWGRRDAAEVWANVLENLLRLGSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRLSDADRRHWCELTAAERAAAPVFISLGGGHYAPKAGDLARKPGVFAGHMLANYAFDWGEGGGWRTAVAEAVAVTRSAMPGCRLAALVDKKAFKAAQKREVESLLEELAVRVEYKREGVIAAAKAAANAEGVGDAETRVVEAAAAAT 1212
            MASTLVHPKTLIVTNTVDPASVVMKDAVLARQGWTPMQGGTQHRELPMRAWEHRAGNIWMVCLEDSMIRADNIDEAFTSSHGVSSLTDVIFLSRHAAASGKPSLTCHPIGLPNPTCEPVSGGVPGKCPPPNPRMASCLRELAVATEAAGLSSEFEVTFETTHHGPWLQTPAMFCEIGSTEEHWGRRDAAEVWANVLENLLRLGSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRLSDADRRHWCELTAAERAAAPVFISLGGGHYAPKAGDLARKPGVFAGHMLANYAFDWGEGGGWRTAVAEAVAVTRSAMPGCRLAALVDKKAFKAAQKREVESLLEELAVRVEYKREGVIAAAKAAANAEGVGDAETRVVEAAAAAT
Sbjct:    1 MASTLVHPKTLIVTNTVDPASVVMKDAVLARQGWTPMQGGTQHRELPMRAWEHRAGNIWMVCLEDSMIRADNIDEAFTSSHGVSSLTDVIFLSRHAAASGKPSLTCHPIGLPNPTCEPVSGGVPGKCPPPNPRMASCLRELAVATEAAGLSSEFEVTFETTHHGPWLQTPAMFCEIGSTEEHWGRRDAAEVWANVLENLLRLGSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRLSDADRRHWCELTAAERAAAPVFISLGGGHYAPKAGDLARKPGVFAGHMLANYAFDWGEGGGWRTAVAEAVAVTRSAMPGCRLAALVDKKAFKAAQKREVESLLEELAVRVEYKREGVIAAAKAAANAEGVGDAETRVVEAAAAAT 404          
BLAST of jgi.p|Trimin1|351342 vs. uniprot
Match: A0A6H5KXL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXL5_9PHAE)

HSP 1 Score: 259 bits (663), Expect = 1.320e-78
Identity = 161/390 (41.28%), Postives = 206/390 (52.82%), Query Frame = 1
Query:    7 STLVHPKTLIVTNTVDPASVVMKDAVLARQGWTPMQGGTQHRELPM-RAWEHRAG--NIWMVCLEDSMIRADNIDEAFTSSHGVSSL---------------TDVIFLSRHAAASGKPSLTCHPIGLPNPTCEPVSGGVPGKCPPPNPRMASCLRELAVATEAAGLSSEFEVTFETTHHGPWLQTPAMFCEIGSTEEHWGRRDAAEVWANVLENLLRLGSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRLSDADRRHWCELTAAERAAAPVFISLGGGHYAPKAGDLARKPGVFAGHMLANYAFDWGEGGG---WRTAVAEAVAVTRSAMPGCR------LAALVDKKAFKAAQKREVESLLEEL 1095
            +T     TL+V +  D A   M +A+LAR  W   + G +H      RA+ H+    ++W+V  E  ++  D+ D  + S+  V S                +DV+FLS+H A SG P+L  HPIG+PNP+    +GG PG+CPPP+PR+A CLREL  A   AGL S F+ T E THHGPWL+TPAMF EIGS+EEHWGR DAAEVWA+VL  +L L  +P                                                       A   +W +L  A RA    F+ +GGGHYAPK GDLAR+ G + GHMLA+YA D+G GGG   WR AV EAV  TR+A PG        + ALVDKKAF+A   RE  +LLE L
Sbjct:   61 ATTATASTLLVGSKQDAAGRAMAEALLARGNWLETEPGVEHDGTRNGRAYRHKLSPTSLWLV--EGRLLDLDDADRRWASASSVGSADEQQSQQQREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGKPGRCPPPSPRLAGCLRELCRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWASVLTRMLGLDGSP-------------------------------------------------------AGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGRGGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRA---RERAALLEHL 390          
BLAST of jgi.p|Trimin1|351342 vs. uniprot
Match: D8LBU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBU1_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 5.610e-77
Identity = 154/369 (41.73%), Postives = 194/369 (52.57%), Query Frame = 1
Query:   70 MKDAVLARQGWTPMQGGTQH---RELPMRAWEHRAGNIWMVCLEDSMIRADNIDEAFTSSHGVSSL---------------TDVIFLSRHAAASGKPSLTCHPIGLPNPTCEPVSGGVPGKCPPPNPRMASCLRELAVATEAAGLSSEFEVTFETTHHGPWLQTPAMFCEIGSTEEHWGRRDAAEVWANVLENLLRLGSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRLSDADRRHWCELTAAERAAAPVFISLGGGHYAPKAGDLARKPGVFAGHMLANYAFDWGEGGG---WRTAVAEAVAVTRSAMPGCR------LAALVDKKAFKAAQKREVESLLEEL 1095
            M +A+LAR  W   + G +    R       +H   ++W+V  E  ++  D+ D  + S+  V S                +DV+FLS+H A SG P+L  HPIG+PNP+    +GG PG+CPPP+PR+A CLREL  A   AGL S F+ T E THHGPWL+TPAMF EIGS+EEHWGR DAAEVWANVL  +L L  +P                                                       A   +W +L  A RA    F+ +GGGHYAPK GDLAR+ G + GHMLA+YA D+G GGG   WR AV EAV  TR+A PG        + ALVDKKAF+A   RE  +LLE L
Sbjct:    1 MAEALLARGNWLETEPGVERDGTRNGKAYRHKHSPTSLWLV--EGRLLDLDDADRRWASASSVGSTDEKPSREQREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGKPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSP-------------------------------------------------------AGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGRGGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRA---RERAALLEHL 309          
BLAST of jgi.p|Trimin1|351342 vs. uniprot
Match: A0A4D9D3I1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3I1_9STRA)

HSP 1 Score: 197 bits (502), Expect = 2.650e-55
Identity = 138/388 (35.57%), Postives = 184/388 (47.42%), Query Frame = 1
Query:   31 LIVTNTVDPASVVMKDAVLARQGW---TPMQGGTQHRELPMRAWEHRAG--NIWMVCLEDSMIRADNIDEAFTSSHGVSSLTDVIFLSRHAAASGKPSLTCHPIGLPNPTCEPVS------GGVPGKCPPPNPRMASCLRELAVATEAAGLSSEFEVTFETTHHGPWLQTPAMFCEIGSTEEHWGRRDAAEVWANVLENLLRLGSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRLSDADRRHWCELTAAERAAAPVFISLGGGHYAPKAGDLAR-KPGVFAGHMLANYAFDWGEGGGWRTAVAEAVAVTRSA--MPG------------CRLAALVDKKAFKAAQKREVESLLEELAVRVEYK 1116
            L++  T D ASV M  A+LAR GW   TP+   +       R W    G  N++M  +    +RAD +D+A+ ++H    + ++IFLSRHAAASG+PSLT HPIG P     P        GG+PG+C PP+PRMA   R+L  A + AGL+  FEVT E THHGPW   P MF EIGS EE WGR DAA VWA+VL+  L L +T                                                            +   + AAE     V +  GGGHY PK  DL R +  V  GH+LA+Y F   E   W+  + EA+  TR A  +P              R+   +DKKAFK+A ++ +   LE   ++  +K
Sbjct:   37 LLLATTEDKASVNMLQALLARGGWEEITPVDASS-------RVWHRPDGPQNVFMWQITQGFLRADWLDKAWLTAHPSQRIQEMIFLSRHAAASGRPSLTIHPIGNPGQPFAPQEEARGEHGGIPGRCVPPSPRMAPLFRQLHGAVQDAGLAGTFEVTLEATHHGPWHMHPTMFVEIGSKEEDWGREDAAHVWADVLDKNLGLSAT----------------------------------------------------------EENGVSIPAAEEPKL-VIVGAGGGHYTPKMNDLLRHREDVLVGHILASYCFTGSEED-WKRGIDEAIQATRRAYSLPSENEEEEDGGKEETRVCVYIDKKAFKSAPRQALVQYLESRGIQCAFK 357          
BLAST of jgi.p|Trimin1|351342 vs. uniprot
Match: A0A2E7KML3_9EURY (D-tyrosyl-tRNA(Tyr) deacylase n=5 Tax=Archaea TaxID=2157 RepID=A0A2E7KML3_9EURY)

HSP 1 Score: 194 bits (494), Expect = 2.190e-54
Identity = 141/391 (36.06%), Postives = 191/391 (48.85%), Query Frame = 1
Query:    1 MASTLVHPKTLIVTNTVDPASVVMKDAVLARQGWTP---MQGGTQHRELPMRAWEHRAGNIWMVCLEDSMIRADNIDEAFTSSHGVSSLTDVIFLSRHAAASGKPSLTCHPIGLPNPTCEPVS-----GGVPGKCPPPNPRMASCLRELAVATEAAGLSSEFEVTFETTHHGPWLQTPAMFCEIGSTEEHWGRRDAAEVWANVLENLLRLGSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRLSDADRRHWCELTAAERAAAPVFISLGGGHYAPKAGDLARKPGVFAGHMLANYA----------FDWGEG----GGWRTAVAEAVAVTRSAMPGCRLAALVDKKAFKAAQKREVESLLEELAVRV 1107
            +AST+V   TL++ +  D ASV+  DA+LAR GWTP   ++GG          W+H   ++ +    + ++  DN+D  F+       + +VIFLSRH AASG+PSLT H IG+P  T  P+      GGV G+   PNPR AS  R +  A E   L  EFE+T ETTHHGP L  P MF EIGS+E HW R DAA+ WA+V+E  L L                                                               +W  L+  ER  A V I +GGGHYAP+  D+ RK   +AGH LANYA          +D  EG    G W+ ++   V  TR+A P  ++ A +D+K+FK  Q+R ++  L EL+V V
Sbjct:   13 LASTMV---TLLIVSAPDIASVIQGDALLARGGWTPCNPIEGGD--------VWQHERADVCLWWFGERVLMEDNLDLRFSQGSN-QVVEEVIFLSRHYAASGRPSLTLHVIGVPGET--PLGEIAEFGGVKGEVVLPNPRFASWYRLMCEAAERHQLIPEFELTIETTHHGPCLGVPTMFIEIGSSESHWNRTDAADAWADVMEKGLGLDG--------------------------------------------------------GEGEGNWDALSLDERKNAKVMIGIGGGHYAPRHTDVLRKTNCWAGHQLANYALEMNKPEDESWDPDEGMYPTGAWQHSIRVCVESTRAAFPDGQVMAHLDRKSFKGWQRRVIKRWLNELSVPV 333          
BLAST of jgi.p|Trimin1|351342 vs. uniprot
Match: A0A075H6X3_9EURY (D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=uncultured marine group II/III euryarchaeote KM3_44_G05 TaxID=1456448 RepID=A0A075H6X3_9EURY)

HSP 1 Score: 193 bits (491), Expect = 5.130e-54
Identity = 137/382 (35.86%), Postives = 184/382 (48.17%), Query Frame = 1
Query:   28 TLIVTNTVDPASVVMKDAVLARQGWTPMQ---GGTQHRELPMRAWEHRAGNIWMVCLEDSMIRADNIDEAFTS--SHGVSSLT----DVIFLSRHAAASGKPSLTCHPIGLP--NPTCEPVS-GGVPGKCPPPNPRMASCLRELAVATEAAGLSSEFEVTFETTHHGPWLQTPAMFCEIGSTEEHWGRRDAAEVWANVLENLLRLGSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRLSDADRRHWCELTAAERAAAPVFISLGGGHYAPKAGDLARKPGVFAGHMLANYAFD--------W----GE--GGGWRTAVAEAVAVTRSAMPGCRLAALVDKKAFKAAQKREVESLLEEL 1095
            TL++ +  D AS +  DA+LAR GW   Q   GG        +AW H    + +    D ++  D +DE + +  + GV        +VIFLSRH AASG+PSLT H IG+P  +P  E    GG+ G+   PNPR AS  R ++ A E  GL  EFE+T ETTHHGP L  P MF EIGS+E HW RRDAAE WA+V+ + L L   P                                                           +W ELTA E++ A V I +GGGHYAP+  D+ RK   +AGH +A YA +        W    GE   G W  ++   V  TR A P  ++ A +D+K+FK  Q++ ++ L  EL
Sbjct:    6 TLLIVSEPDIASTIQGDALLARGGWEETQTIEGG--------KAWSHETAPVHLWWFPDKVLWQDRLDERYENGANAGVDGAAVKVGEVIFLSRHFAASGRPSLTLHVIGVPGESPVGEEAEFGGIKGEVVLPNPRFASWFRMMSEAGERHGLIPEFEMTIETTHHGPCLSVPTMFIEIGSSESHWDRRDAAEAWADVITDGLGLEGKPKPG--------------------------------------------------------NWSELTAHEKSVAKVMIGIGGGHYAPRHTDVLRKTDCWAGHQIAGYALEMEKPEDPEWDPITGELPAGQWNHSIRVCVESTRQAFPSGQVIAHLDRKSFKGWQRQAIKRLCAEL 323          
BLAST of jgi.p|Trimin1|351342 vs. uniprot
Match: A0A432HW31_9ARCH (D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Archaea TaxID=2157 RepID=A0A432HW31_9ARCH)

HSP 1 Score: 191 bits (486), Expect = 2.230e-53
Identity = 131/380 (34.47%), Postives = 184/380 (48.42%), Query Frame = 1
Query:   28 TLIVTNTVDPASVVMKDAVLARQGWT---PMQGGTQHRELPMRAWEHRAGNIWMVCLEDSMIRADNIDEAFTSSHGVSSLTDVIFLSRHAAASGKPSLTCHPIGLP--NPTCEPVS-GGVPGKCPPPNPRMASCLRELAVATEAAGLSSEFEVTFETTHHGPWLQTPAMFCEIGSTEEHWGRRDAAEVWANVLENLLRLGSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRLSDADRRHWCELTAAERAAAPVFISLGGGHYAPKAGDLARKPGVFAGHMLANYAFD--------WGEGGG------WRTAVAEAVAVTRSAMPGCRLAALVDKKAFKAAQKREVESLLEELAVRV 1107
            TL++ +  D AS V  DA+L R GW    P++ G        R W H +  + +    + ++ AD +DE + ++ G   + +VIFLSRH+AASG+PSLT H IG+P  +P  E    GG+ G   PPNPR A+  R +  A     ++ EF++T ETTHHGP L +P MF EIGS+E HWGR DAAE WA+V+   L L                                                      P L D     W  L+ +ERA + V + +GGGHYAP+  D+ R+   +AGH +A+YA +        W    G      W  A+      TR + PG  + A +D+K+FK  Q+R V  L EEL + V
Sbjct:    5 TLLIVSAEDIASTVQGDALLGRGGWNEADPVEEG--------RTWRHTSQPVHIWWFPERVLWADQLDERYAAASGAQ-VREVIFLSRHSAASGRPSLTLHVIGVPGESPVGESAEYGGIKGAVVPPNPRFAAWYRRMVQAAHDHAVTDEFDLTIETTHHGPSLSSPTMFIEIGSSESHWGRTDAAEAWADVISEGLGLDG---------------------------------------------------GPGLGD-----WHALSDSERAQSKVMLGIGGGHYAPRHIDVLRRTNCWAGHQIASYALEMQRPEDESWDPQTGDLPEGQWEHAIRVCAESTRQSFPGGEVMAHLDRKSFKGWQRRAVIRLCEELDIPV 319          
BLAST of jgi.p|Trimin1|351342 vs. uniprot
Match: A0A2A5VPH6_9ARCH (D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Marine Group II euryarchaeote MED-G33 TaxID=2007294 RepID=A0A2A5VPH6_9ARCH)

HSP 1 Score: 189 bits (480), Expect = 2.160e-52
Identity = 135/385 (35.06%), Postives = 183/385 (47.53%), Query Frame = 1
Query:   28 TLIVTNTVDPASVVMKDAVLARQGWTPM---QGGTQHRELPMRAWEHRAGNIWMVCLEDSMIRADNIDEAFTSSHGVSSLTDVIFLSRHAAASGKPSLTCHPIGLPNPTCE---PVSGGVPGKCPPPNPRMASCLRELAVATEAAGLSSEFEVTFETTHHGPWLQTPAMFCEIGSTEEHWGRRDAAEVWANVLENLLRLGSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRLSDADRRHWCELTAAERAAAPVFISLGGGHYAPKAGDLARKPGVFAGHMLANYA----------FDWGEG----GGWRTAVAEAVAVTRSAMPGCRLAALVDKKAFKAAQKREVESLLEELAVRVEYKRE 1122
            TL++ + +D AS +  DA+LAR GW+ M   +GG        R W+H+   +W+       +  D +D  F++  GVS + +VIFLSRH AASG+PSLT H +G+P  T        GG+ G+   P  R AS  R +  A     L  EFE+T ETTHHGP L  P MF EIGS+E HWGR DAAE WA+V+  ++ LG                                                               W  L+  E++   V I +GGGHYAP+  D+ RK   +AGH LANYA          +D  EG    G W  A+  +V  TR A PG  +   +D+K+FK  Q+R ++ LL EL V V   R+
Sbjct:   14 TLLIVSNLDIASTIQGDALLARGGWSEMDSVEGG--------RVWKHQVNEVWLWWFGGRFLMEDELDTRFSTGVGVS-VDEVIFLSRHYAASGRPSLTLHVLGVPGETPHGERAEHGGIKGEVMLPCTRFASWYRLMCDAAHHHQLVPEFELTIETTHHGPRLDVPTMFIEIGSSETHWGRVDAAEAWADVM--VIGLGLEGGMGIG------------------------------------------------------EWNSLSDEEKSEQKVMIGVGGGHYAPRHTDVLRKTNCWAGHQLANYALGMEKPQDEAWDPDEGVLPDGAWNHAIRVSVESTRRAFPGGNVMVHLDRKSFKGWQRRVIKRLLNELGVPVGRTRD 333          
BLAST of jgi.p|Trimin1|351342 vs. uniprot
Match: A0A2E6DU65_9EURY (D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E6DU65_9EURY)

HSP 1 Score: 187 bits (476), Expect = 6.020e-52
Identity = 130/376 (34.57%), Postives = 180/376 (47.87%), Query Frame = 1
Query:   28 TLIVTNTVDPASVVMKDAVLARQGWTPMQGGTQHRELPMRAWEHRAGNIWMVCLEDSMIRADNIDEAFTSSHGVSSLTDVIFLSRHAAASGKPSLTCHPIGLPNPTCE---PVSGGVPGKCPPPNPRMASCLRELAVATEAAGLSSEFEVTFETTHHGPWLQTPAMFCEIGSTEEHWGRRDAAEVWANVLENLLRLGSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRLSDADRRHWCELTAAERAAAPVFISLGGGHYAPKAGDLARKPGVFAGHMLANYAF-------DWG--EG----GGWRTAVAEAVAVTRSAMPGCRLAALVDKKAFKAAQKREVESLLEELAVRV 1107
            TL++ +  D AS +  DA+L+R GW       + R      W+H +  + +   +  ++  D++D+ F + +   S+++VIFLSRH AASG+PSLT H IG+P  T        GG+ G    PN R AS  R +  A     L  EFE+T ETTHHGP L  P MF EIGS+E HW RRDAAE WA+V+EN L L                                                           A    W  L+   +  A + + +GGGHYAP+  D+ RK   +AGH LANYA        DW   EG    G W+ A+  +V  T+ A PG  + A +D+K+FK  Q+R ++  L+EL V V
Sbjct:    3 TLLIVSEPDIASTIQGDALLSRGGWLSCDSIEEGR-----VWKHESAEVCLWWFQHRVLMEDDLDQRFENGYK-QSVSEVIFLSRHYAASGRPSLTLHVIGVPGETPRGEVAEFGGIKGNVVLPNTRFASWYRLMCEAAHKHELVPEFELTIETTHHGPCLSVPTMFIEIGSSESHWNRRDAAEAWADVIENGLGLNG--------------------------------------------------------GAGIGDWNALSTDVKKQAKIMVGIGGGHYAPRHTDVLRKTECWAGHQLANYALEMLKPDDDWDPDEGAYPQGPWQHAIRVSVESTQEAFPGGMVMAHLDRKSFKGWQRRVIKRFLDELNVPV 316          
BLAST of jgi.p|Trimin1|351342 vs. uniprot
Match: A0A2E7G0L3_9EURY (D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E7G0L3_9EURY)

HSP 1 Score: 187 bits (476), Expect = 9.510e-52
Identity = 128/376 (34.04%), Postives = 179/376 (47.61%), Query Frame = 1
Query:   31 LIVTNTVDPASVVMKDAVLARQGWTPMQGGTQHRELPMRAWEHRAGNIWMVCLEDSMIRADNIDEAFTSSHGVSSLTDVIFLSRHAAASGKPSLTCHPIGLPNPTC---EPVSGGVPGKCPPPNPRMASCLRELAVATEAAGLSSEFEVTFETTHHGPWLQTPAMFCEIGSTEEHWGRRDAAEVWANVLENLLRLGSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRLSDADRRHWCELTAAERAAAPVFISLGGGHYAPKAGDLARKPGVFAGHMLANYAF--------DWGEG------GGWRTAVAEAVAVTRSAMPGCRLAALVDKKAFKAAQKREVESLLEELAVRV 1107
            L++ +  D ASV+  +AVL R  W  + G  ++     RAW+H   +IW+  ++   +  +N+D  F+++ G  ++++VIFLSRH AASG PSLT H IG+P       E   GG+ G+   PNPR A   R +  A     L  EF++T ETTHHGP L  P MF EIGS+E HW RRDAAE WA+V+   L L                                                           + +  W  LT  +RA   V + +GGGHYAP+  D+ RK   +AGH LA Y+         DW         G W+ ++  A+  TR A  G  + A +D+K+FK  Q+R +  LL EL V V
Sbjct:   20 LLMVSEQDIASVIQGEAVLGRSKWIQI-GAIEN----CRAWKHFQKDIWIWWIKSGFLFENNLDSRFSNATG-ENISEVIFLSRHFAASGMPSLTLHVIGVPGEIPHGEEAEHGGIKGRVVQPNPRFADWYRLMCKAAVEHDLVPEFDLTIETTHHGPILDVPTMFVEIGSSESHWNRRDAAEAWADVIVEGLGLDG--------------------------------------------------------GSGKGDWSSLTTEQRANEKVMVGIGGGHYAPRHSDVIRKTRCWAGHQLAGYSLPMEKPTDVDWDPDTGNYPVGAWKHSIETAIISTRLAFEGSTVMAHLDRKSFKGWQRRIIHRLLNELEVPV 333          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351342 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C895_9STRA1.210e-245100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KXL5_9PHAE1.320e-7841.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBU1_ECTSI5.610e-7741.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4D9D3I1_9STRA2.650e-5535.57Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A2E7KML3_9EURY2.190e-5436.06D-tyrosyl-tRNA(Tyr) deacylase n=5 Tax=Archaea TaxI... [more]
A0A075H6X3_9EURY5.130e-5435.86D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=uncultured m... [more]
A0A432HW31_9ARCH2.230e-5334.47D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Archaea TaxI... [more]
A0A2A5VPH6_9ARCH2.160e-5235.06D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Marine Group... [more]
A0A2E6DU65_9EURY6.020e-5234.57D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Euryarchaeot... [more]
A0A2E7G0L3_9EURY9.510e-5234.04D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Euryarchaeot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_88contigContig_88:66491..69600 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|351342|estExt_Genemark1.C_Ctg_880009
BRITEko00000,ko01000,ko03016
KEGG koko:K09716
EC3.1.1.96
GOsGO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051499,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360
DescriptionD-aminoacyl-tRNA deacylase
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsCOG1650@1|root,2QRIE@2759|Eukaryota
Evalue1.05e-78
Seed ortholog2880.D8LBU1
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionD-aminoacyl-tRNA deacylase
Ec32 orthologEc-27_002710.1
TranscriptId351664
TrackFilteredModels1
ProteinId351342
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351342gene_11016Tribonema minus UTEX_B_3156 geneContig_88 66491..69600 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11016_1exon_11016_1Tribonema minus UTEX_B_3156 exonContig_88 66491..66728 +
exon_11016_2exon_11016_2Tribonema minus UTEX_B_3156 exonContig_88 67771..68072 +
exon_11016_3exon_11016_3Tribonema minus UTEX_B_3156 exonContig_88 68707..69600 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11016CDS_11016Tribonema minus UTEX_B_3156 CDSContig_88 66491..66728 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_11016UTR3_11016Tribonema minus UTEX_B_3156 three_prime_UTRContig_88 69382..69600 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351342Trimin1|351342|estExt_Genemark1.C_Ctg_880009Tribonema minus UTEX_B_3156 polypeptideContig_88 66491..69381 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11016 ID=mRNA_11016|Name=jgi.p|Trimin1|351342|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1434bp|location=Sequence derived from alignment at Contig_88:66491..69600+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGAGCACTCTGGTGCACCCGAAGACGCTCATAGTCACAAACACGGT
GGACCCAGCGTCGGTGGTCATGAAGGATGCGGTGTTGGCGCGGCAGGGCT
GGACTCCGATGCAGGGGGGGACGCAACACCGGGAGCTGCCGATGAGGGCG
TGGGAGCACAGGGCAGGAAACATCTGGATGGTGTGCTTGGAGGACTCAAT
GATACGTGCGGACAACATTGACGAGGCCTTCACGTCATCACACGGCGTGA
GCTCCCTCACCGACGTGATATTCCTCTCACGGCACGCCGCCGCTAGCGGC
AAGCCCTCCCTGACGTGCCACCCCATTGGGCTACCAAATCCCACCTGCGA
ACCGGTGTCAGGGGGGGTCCCTGGCAAGTGCCCCCCCCCAAATCCACGCA
TGGCCAGCTGCCTGCGGGAACTGGCGGTTGCAACGGAGGCAGCAGGGCTC
AGCAGCGAGTTTGAAGTTACGTTTGAGACGACGCACCACGGGCCGTGGCT
GCAGACGCCGGCGATGTTCTGCGAGATCGGCAGTACGGAGGAACACTGGG
GGCGGCGCGACGCGGCGGAGGTGTGGGCGAACGTTCTGGAGAACCTGCTG
CGCCTTGGCAGCACGCCGCCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGC
AGCGCCATCACCGGCAGCAGCATCAGCAGCAGCAGCGGCACCAGCAGCAG
CAGCAGCGGCAGCATCATCACCACCACCAGCAGCAGCAGCAGCGGCAGCA
GCAGCGGCAGCGGCAGCTCCGCGGCTGAGCGATGCGGACCGCCGCCACTG
GTGCGAGCTCACGGCGGCGGAGCGCGCGGCGGCGCCCGTCTTCATCAGCC
TCGGCGGCGGGCACTACGCGCCCAAGGCGGGCGACCTCGCGCGCAAGCCC
GGGGTGTTCGCAGGGCACATGCTCGCGAACTACGCGTTTGACTGGGGGGA
GGGGGGGGGGTGGCGCACGGCGGTCGCGGAGGCGGTGGCAGTTACGCGCA
GCGCCATGCCGGGCTGCCGCCTCGCAGCGCTCGTAGATAAGAAGGCCTTC
AAGGCGGCGCAGAAGCGGGAGGTAGAGAGCTTATTGGAGGAGCTTGCGGT
GAGGGTGGAGTACAAGCGCGAGGGGGTGATAGCAGCGGCCAAGGCGGCAG
CGAATGCAGAGGGTGTCGGTGACGCGGAGACTCGCGTGGTGGAGGCAGCG
GCGGCAGCAACGTGAAGGGCCGGCGCGATTAGGGCTAGGGTTAGGGTTGA
CGTGTGGTCAAGACGCCGACTTGACGCCTGCCACTGAGTCGTCGTGTTTA
CGTCCGTCTGCTGTTTTGGTTTACCAACGATGTCGTTACGTGGTGCAAGC
AGCTGCGGCAGCTGCCTGCAGCAATGCACAAGGTTCCCGTCATTGTTAGC
ATTGAAAAATGAATCTATGGCTGCTGTTGCCTGC
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protein sequence of jgi.p|Trimin1|351342

>Trimin1|351342|estExt_Genemark1.C_Ctg_880009 ID=Trimin1|351342|estExt_Genemark1.C_Ctg_880009|Name=jgi.p|Trimin1|351342|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=405bp
MASTLVHPKTLIVTNTVDPASVVMKDAVLARQGWTPMQGGTQHRELPMRA
WEHRAGNIWMVCLEDSMIRADNIDEAFTSSHGVSSLTDVIFLSRHAAASG
KPSLTCHPIGLPNPTCEPVSGGVPGKCPPPNPRMASCLRELAVATEAAGL
SSEFEVTFETTHHGPWLQTPAMFCEIGSTEEHWGRRDAAEVWANVLENLL
RLGSTPPAAAAAAAAAAAPSPAAASAAAAAPAAAAAAASSPPPAAAAAAA
AAAAAAPRLSDADRRHWCELTAAERAAAPVFISLGGGHYAPKAGDLARKP
GVFAGHMLANYAFDWGEGGGWRTAVAEAVAVTRSAMPGCRLAALVDKKAF
KAAQKREVESLLEELAVRVEYKREGVIAAAKAAANAEGVGDAETRVVEAA
AAAT*
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mRNA from alignment at Contig_88:66491..69600+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11016 ID=mRNA_11016|Name=jgi.p|Trimin1|351342|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3110bp|location=Sequence derived from alignment at Contig_88:66491..69600+ (Tribonema minus UTEX_B_3156 )
ATGGCGAGCACTCTGGTGCACCCGAAGACGCTCATAGTCACAAACACGGT GGACCCAGCGTCGGTGGTCATGAAGGATGCGGTGTTGGCGCGGCAGGGCT GGACTCCGATGCAGGGGGGGACGCAACACCGGGAGCTGCCGATGAGGGCG TGGGAGCACAGGGCAGGAAACATCTGGATGGTGTGCTTGGAGGACTCAAT GATACGTGCGGACAACATTGACGAGGCCTTCACGTCATGTGAGTCTGGCT TGCTTTGTCACACCACGACGCAGTACGAGGTTTTGAAGTTACATCTTCCG ACATGTTACCTCAACGAGAACCAACGATAACCCCAGCTTAGCTCAACTCA AAACATCTCCACCAGTACTTTTTCCCTGACCGACCAACACCGGCTTGCGG CAGTAAGAAGTCTAGCCATTGAACGACGCGTCCAGCTAAAATCCCGCTGT CCGAGTACCTTCACATCGGCAGCCCAAGCCTGGTTTCATTGCGGGCCCGA TTGTATTGCTGTGCGTGCTATGCAGCTGCTTGTGCGTGCAGCGAGCGGCC TTTGAACTCTGTGAGCTACACGGCGCTTTGCGTGACAAACAGGTGCAAGC ACCATCGTCGTGCCAGCGGCTGCCAATGCGTGCGAGCGAAGTGTGCCGGA TAACGCTGTCTCGTTGCGCTGCTGTAGAATACGGTTGGCTGTGCGCGCTT GCTCCAGGATAGTGTTCATTCGTTGTGCGTGCGTGGCGGCGATACAGACC CAGGCTGCCGCATCCCATGTGCGTCCTACAGCCGCCTCATATCTCGTTTG CTGTCTGGCTCGGCAACTTTGGCGATCAGGCACGACATCACGGTGGCGCA GTGTGTCATGAGTCTGTCATTTGAGTTGCAATGTCCCGAAACGTGGTGTG TCCGCAGTTGTCAAAGTAAGAGTTGACGTACAAAATCTGTACGGAGTGCT TGCATGTACATCCAATTGGAAAAGTAAAAGTTGAACTACAGAATCCTCAG GGAGTGCCATAACTGGTGCACCGCAACGCGCACCAGTGTCGCCTCTCTAT GTTGGGCAACATTCGCTTTTCGCTTGTCACAGCCCTGAATGTAGCCTCGA CTTCCTCGTGCAAGTCTGTCACCAAGAAGCCGCCCTCCAGTGCAGCACTC TGACCAAGTTTGAGGGCGCTAACCGGTGGAAGTGATTCTTGCGAATCGCG ATTGTACTCGTAAAGGCATTTCAGGAGCAGCTGATTTAAGCCCCCCCCCC CCCCCCCAAACCCCTTCACCCCTTTCGTAGCACACGGCGTGAGCTCCCTC ACCGACGTGATATTCCTCTCACGGCACGCCGCCGCTAGCGGCAAGCCCTC CCTGACGTGCCACCCCATTGGGCTACCAAATCCCACCTGCGAACCGGTGT CAGGGGGGGTCCCTGGCAAGTGCCCCCCCCCAAATCCACGCATGGCCAGC TGCCTGCGGGAACTGGCGGTTGCAACGGAGGCAGCAGGGCTCAGCAGCGA GTTTGAAGTTACGTTTGAGACGACGCACCACGGGCCGTGGCTGCAGACGC CGGCGATGTTCTGCGAGATCGGCAGTACGGAGGTGAGAGGAGCAAGCAGT CGCTTTGCAGCATTAACAGCGAGAGCACTAGCAGCAGAAGATGGAGTCAG CCACTGCCACAGTCTAGGTGTTTGCTTGGATTGACCTGCGCACATATTGG AAATGCCTGACTGAGCTGAAGCAGTCGCCGTGGTAGGGTTGAATGCTGGC AGCACTCACCTCAAGCAGGCCAGTAGTGGAGCAGCGACGGACTGTTCACC CCCATGGACACCAACTTGAAGAGAGACCTGACTCGATGGCAACAAAGCTT TTGCACAGCGGACGCCATGGCCGTTACGCTTCTCATAGTTCATGATTTCC CAGAGCGCTGCAGACAGGGGCTTGCATGCTTCGCGCCGTCTCCACACTGC TTTGACAGTGCCTTCGCTAGTAGGCGTCTCTGCAGCTCTGGAGCGCCTGG GATGGCACGCTGCGACGGACGCCTACACAGTACAGTGGAACAGCAGCAGA AATATGGCTCCGAATTTCATCAGTGTGAACCCATGTACAACGATCCACTG CATTGAGACATACCCTACCCGTTTGGTCCCTTTTATACCGCCCCACCATA TTCAAAGGCCGGTTCCTGGCGTCACAACTCGCCGCCGCCGCCGCCGCTGC CATATCATATGCGCAGGAACACTGGGGGCGGCGCGACGCGGCGGAGGTGT GGGCGAACGTTCTGGAGAACCTGCTGCGCCTTGGCAGCACGCCGCCAGCA GCAGCAGCAGCAGCAGCGGCAGCAGCAGCGCCATCACCGGCAGCAGCATC AGCAGCAGCAGCGGCACCAGCAGCAGCAGCAGCGGCAGCATCATCACCAC CACCAGCAGCAGCAGCAGCGGCAGCAGCAGCGGCAGCGGCAGCTCCGCGG CTGAGCGATGCGGACCGCCGCCACTGGTGCGAGCTCACGGCGGCGGAGCG CGCGGCGGCGCCCGTCTTCATCAGCCTCGGCGGCGGGCACTACGCGCCCA AGGCGGGCGACCTCGCGCGCAAGCCCGGGGTGTTCGCAGGGCACATGCTC GCGAACTACGCGTTTGACTGGGGGGAGGGGGGGGGGTGGCGCACGGCGGT CGCGGAGGCGGTGGCAGTTACGCGCAGCGCCATGCCGGGCTGCCGCCTCG CAGCGCTCGTAGATAAGAAGGCCTTCAAGGCGGCGCAGAAGCGGGAGGTA GAGAGCTTATTGGAGGAGCTTGCGGTGAGGGTGGAGTACAAGCGCGAGGG GGTGATAGCAGCGGCCAAGGCGGCAGCGAATGCAGAGGGTGTCGGTGACG CGGAGACTCGCGTGGTGGAGGCAGCGGCGGCAGCAACGTGAAGGGCCGGC GCGATTAGGGCTAGGGTTAGGGTTGACGTGTGGTCAAGACGCCGACTTGA CGCCTGCCACTGAGTCGTCGTGTTTACGTCCGTCTGCTGTTTTGGTTTAC CAACGATGTCGTTACGTGGTGCAAGCAGCTGCGGCAGCTGCCTGCAGCAA TGCACAAGGTTCCCGTCATTGTTAGCATTGAAAAATGAATCTATGGCTGC TGTTGCCTGC
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Coding sequence (CDS) from alignment at Contig_88:66491..69600+

>mRNA_11016 ID=mRNA_11016|Name=jgi.p|Trimin1|351342|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1215bp|location=Sequence derived from alignment at Contig_88:66491..69600+ (Tribonema minus UTEX_B_3156 )
ATGGCGAGCACTCTGGTGCACCCGAAGACGCTCATAGTCACAAACACGGT
GGACCCAGCGTCGGTGGTCATGAAGGATGCGGTGTTGGCGCGGCAGGGCT
GGACTCCGATGCAGGGGGGGACGCAACACCGGGAGCTGCCGATGAGGGCG
TGGGAGCACAGGGCAGGAAACATCTGGATGGTGTGCTTGGAGGACTCAAT
GATACGTGCGGACAACATTGACGAGGCCTTCACGTCATCACACGGCGTGA
GCTCCCTCACCGACGTGATATTCCTCTCACGGCACGCCGCCGCTAGCGGC
AAGCCCTCCCTGACGTGCCACCCCATTGGGCTACCAAATCCCACCTGCGA
ACCGGTGTCAGGGGGGGTCCCTGGCAAGTGCCCCCCCCCAAATCCACGCA
TGGCCAGCTGCCTGCGGGAACTGGCGGTTGCAACGGAGGCAGCAGGGCTC
AGCAGCGAGTTTGAAGTTACGTTTGAGACGACGCACCACGGGCCGTGGCT
GCAGACGCCGGCGATGTTCTGCGAGATCGGCAGTACGGAGGAACACTGGG
GGCGGCGCGACGCGGCGGAGGTGTGGGCGAACGTTCTGGAGAACCTGCTG
CGCCTTGGCAGCACGCCGCCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGC
AGCGCCATCACCGGCAGCAGCATCAGCAGCAGCAGCGGCACCAGCAGCAG
CAGCAGCGGCAGCATCATCACCACCACCAGCAGCAGCAGCAGCGGCAGCA
GCAGCGGCAGCGGCAGCTCCGCGGCTGAGCGATGCGGACCGCCGCCACTG
GTGCGAGCTCACGGCGGCGGAGCGCGCGGCGGCGCCCGTCTTCATCAGCC
TCGGCGGCGGGCACTACGCGCCCAAGGCGGGCGACCTCGCGCGCAAGCCC
GGGGTGTTCGCAGGGCACATGCTCGCGAACTACGCGTTTGACTGGGGGGA
GGGGGGGGGGTGGCGCACGGCGGTCGCGGAGGCGGTGGCAGTTACGCGCA
GCGCCATGCCGGGCTGCCGCCTCGCAGCGCTCGTAGATAAGAAGGCCTTC
AAGGCGGCGCAGAAGCGGGAGGTAGAGAGCTTATTGGAGGAGCTTGCGGT
GAGGGTGGAGTACAAGCGCGAGGGGGTGATAGCAGCGGCCAAGGCGGCAG
CGAATGCAGAGGGTGTCGGTGACGCGGAGACTCGCGTGGTGGAGGCAGCG
GCGGCAGCAACGTGA
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