mRNA_11002 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|94083 vs. uniprot
Match: A0A836C9F3_9STRA (Heat shock protein 40 like protein/ DnaJ domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9F3_9STRA) HSP 1 Score: 675 bits (1742), Expect = 2.270e-243 Identity = 349/349 (100.00%), Postives = 349/349 (100.00%), Query Frame = 3
Query: 177 MAEGEDVLSLMLYTVLVYPVCKWIMGSKRFGKRSVWYAMALLAAVAAVHIAWEWRERGPNHYQLLGVGREATPLEIKKAYKRASLELHPDKNPSPEAVDQFAEMKDAYEVLMDQEFRDIYNKLGPEAIRTKQRMDETELLLAIGAQYVVWGVIAYLLTMGAAGAAARAAVFTGEIAMIVLEITNISTGQGSSLLPPWFAPSVTDHEVIWLMRAAFPAYLTGARALCAHRHVDVGAQTRDLLAALQKGHAELLLKLQLLQTEIRDLSAAAAARGGSGNPRLAAAAAGADKAVTVSAKQSPAAMVRELEQRMKEHSQNIELLATPIQEPVKGRSNFWWILGAYVVFYYFTQ 1223
MAEGEDVLSLMLYTVLVYPVCKWIMGSKRFGKRSVWYAMALLAAVAAVHIAWEWRERGPNHYQLLGVGREATPLEIKKAYKRASLELHPDKNPSPEAVDQFAEMKDAYEVLMDQEFRDIYNKLGPEAIRTKQRMDETELLLAIGAQYVVWGVIAYLLTMGAAGAAARAAVFTGEIAMIVLEITNISTGQGSSLLPPWFAPSVTDHEVIWLMRAAFPAYLTGARALCAHRHVDVGAQTRDLLAALQKGHAELLLKLQLLQTEIRDLSAAAAARGGSGNPRLAAAAAGADKAVTVSAKQSPAAMVRELEQRMKEHSQNIELLATPIQEPVKGRSNFWWILGAYVVFYYFTQ
Sbjct: 1 MAEGEDVLSLMLYTVLVYPVCKWIMGSKRFGKRSVWYAMALLAAVAAVHIAWEWRERGPNHYQLLGVGREATPLEIKKAYKRASLELHPDKNPSPEAVDQFAEMKDAYEVLMDQEFRDIYNKLGPEAIRTKQRMDETELLLAIGAQYVVWGVIAYLLTMGAAGAAARAAVFTGEIAMIVLEITNISTGQGSSLLPPWFAPSVTDHEVIWLMRAAFPAYLTGARALCAHRHVDVGAQTRDLLAALQKGHAELLLKLQLLQTEIRDLSAAAAARGGSGNPRLAAAAAGADKAVTVSAKQSPAAMVRELEQRMKEHSQNIELLATPIQEPVKGRSNFWWILGAYVVFYYFTQ 349
BLAST of jgi.p|Trimin1|94083 vs. uniprot
Match: A0A835YNL9_9STRA (Heat shock protein 40 like protein/ DnaJ domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL9_9STRA) HSP 1 Score: 367 bits (941), Expect = 4.090e-122 Identity = 187/356 (52.53%), Postives = 244/356 (68.54%), Query Frame = 3
Query: 177 MAEGED---VLSLMLYTVLVYPVCKWIMGSKRFGKR-SVWYAMALLAAVAAVHIAWEWRERGPNHYQLLGVGREATPLEIKKAYKRASLELHPDKNPSPEAVDQFAEMKDAYEVLMDQEFRDIYNKLGPEAIRTKQRMDETELLLAIGAQYVVWGVIAYLLTMGAAGAAARAAVFTGEIAMIVLEITNISTGQGSSLLPPWFAPSVTDHEVIWLMRAAFPAYLTGARALCAHRHVDVGAQTRDLLAALQKGHAELLLKLQLLQTEIRDLSAAAAARGGSGNPRLAAAAAGADKAVTVSAKQSPAAMVRELEQRMKEHSQNIELLATPIQEPV---KGRSNFWWILGAYVVFYYFTQ 1223
MA+G+ ++SL+ Y VLVYP C WI+ SKRF +R S+ YA+ L +A +A EW++RGPNHYQLLGVGR A+ +IK+AYKR SLELHPDKNPSP+A DQF +KDAY+VL D EFRDIYNKLGPEAIRT QR+D+++L+L I QY+VWGVIAY+LT+G +G +AR+ VFTGE+ M+V E+ NI QG+S+LPPWF PS+T+ E++W MRA FPAY+ G R++C + HVD QTR LL ALQKGH +++LK+QL+ TE +DL +RELEQR++E S + P +EP KGRS W +LGAYV++YYF Q
Sbjct: 1 MADGDGSDGIVSLLFYVVLVYPACNWILTSKRFSRRRSIVYAILFLGVIAIAKVALEWKDRGPNHYQLLGVGRTASVGDIKQAYKRLSLELHPDKNPSPDAADQFTAVKDAYDVLTDVEFRDIYNKLGPEAIRTHQRLDDSQLMLQIAVQYIVWGVIAYMLTLGKSGESARSLVFTGEMVMLVFEVANIRKPQGASVLPPWFLPSMTEFELVWFMRAMFPAYMNGCRSICGYLHVDYDEQTRTLLRALQKGHNDVMLKVQLMTTETKDL-------------------------------------LRELEQRLQE-SATVTAAEAPAKEPAAAGKGRSTLWLLLGAYVIYYYFFQ 318
BLAST of jgi.p|Trimin1|94083 vs. uniprot
Match: D7G2Q7_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Q7_ECTSI) HSP 1 Score: 276 bits (707), Expect = 2.480e-86 Identity = 152/356 (42.70%), Postives = 224/356 (62.92%), Query Frame = 3
Query: 180 AEGEDVL-SLMLYTVLVYPVCKWIMGSKRFGK-RSVWYAMALLAAVAAVHIAWEWRERGPNHYQLLGVGREATPLEIKKAYKRASLELHPDKNPSPEAVDQFAEMKDAYEVLMDQEFRDIYNKLGPEAIRTKQRMDETELLLAIGAQYVVWGVIAYLLTMGAAGAAARAAVFTGEIAMIVLEITNISTGQGSSLLPPWFAPSVTDHEVIWLMRAAFPAYLTGARALCAHRHVDVGAQTRDLLAALQKGHAELLLKLQLLQTEIRDL-SAAAAAR------GGSGNPRLAAAAAGADKAVTVSAKQSPAAMVRELEQRMKEHSQNIELLATPIQEPVKGRSNFWWIL-GAYVVFYYF 1217
AE L +L Y + V+PVC WI+ KRF K R++ YA+A LA +A +A E ERGPN YQLLGV R ++ +EIK+AY++ SLELHPDKNPS +A D F++++ A E+LMD E R+IY+KLGPEA +K +E +L+ + Y+ WGV+AY++T+G A AR VFTG+I M+ +E+ ++T G +LP W P + ++EV+W++ + FPAY+ G R+L +H VDV QTRD+L AL+ GH ++L+ L+ +Q I L S+ AR GGS PR + AK S +RELE+++ + ++ +A I++ K N W+L G +VVFY+F
Sbjct: 5 AESAGALGTLFFYVMFVHPVCAWILAPKRFPKDRAIVYAIAFLATIAIGKMALENAERGPNFYQLLGVRRGSSAIEIKRAYRQLSLELHPDKNPSQDAADMFSKIQAAQEILMDSEKREIYDKLGPEAATSKHPFNENTMLIEMAIWYITWGVLAYVMTLGKANRQARDWVFTGQIVMLAVEVAIVTTPGGDGVLPSWLFPHMAEYEVVWILHSIFPAYMNGCRSLGSHLFVDVDQQTRDMLLALRAGHQDVLVVLRDIQGSINSLGSSGGGARLTNSSSGGSAGPRA------------IPAKASAVGKLRELEEKLTRNGTGVDAVAAEIKDSGKSSGNMQWLLVGIWVVFYFF 348
BLAST of jgi.p|Trimin1|94083 vs. uniprot
Match: A0A7S2V6D8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6D8_9STRA) HSP 1 Score: 265 bits (676), Expect = 7.140e-82 Identity = 146/350 (41.71%), Postives = 216/350 (61.71%), Query Frame = 3
Query: 177 MAEGEDVLSLMLYTVLVYPVCKWIMGSKRFGKRS-VWYAMALLAAVAAVHIAWEWRERGPNHYQLLGVGREATPLEIKKAYKRASLELHPDKNPSPEAVDQFAEMKDAYEVLMDQEFRDIYNKLGPEAIRTKQRMDETELLLAIGAQYVVWGVIAYLLTMGAAGAAARAAVFTGEIAMIVLEITNISTGQGSSLLPPWFAPSVTDHEVIWLMRAAFPAYLTGARALCAHRHVDVGAQTRDLLAALQKGHAELLLKLQLLQTEIRDLSAAAAARGGSGNPRLAAAAAGADKAVTVSAKQSPAAMVRELEQRMKEHSQNIELLATPIQEPVKGR---SNFWWILGAYVVFYY 1214
M E + Y + VYPV WI+ RF K+ + YA+A L +A++ I + +RGPN+YQ+LGV R + PLEIK+AYK+ ++ELHPDKNPSP A ++F +K AY+VLMD E R++YNK G + I++ +R DE ++LL I YV WG++AY+LT+G + AR +FTGEI M+V E+T + QG +P WF P VT+HE+I L+ A FP ++ G R + + +VD+ QTR+LL L + +LL L+ +Q ++ A A GG G GA A+ K +P ++ELE+RMK ++ ++ A + G+ S+FWW+LG Y+VFYY
Sbjct: 1 MGEEGGLGDFFFYVMFVYPVTNWILKPGRFQKKKGIMYAIAFLVVIASIKIGVDVMDRGPNYYQVLGVNRASNPLEIKRAYKKMAVELHPDKNPSPNAEEEFNRLKSAYDVLMDMELREVYNKFGEDGIKSNKRFDEYQMLLEIAIFYVTWGMLAYVLTLGKSSVTARTWIFTGEIVMLVAEVTFM-LNQGE--MPTWFLPFVTEHELILLLHALFPPFMNGCRCIGSALYVDIDQQTRNLLQELHNQNNTILLVLRDIQVNLQQ-GVAVAGSGGGGKV-----VGGASSAI----KATPTGKLKELEERMKANALGLKTSAVAKELENSGKTGVSSFWWMLGLYIVFYY 337
BLAST of jgi.p|Trimin1|94083 vs. uniprot
Match: A0A4D9D5F1_9STRA (J domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5F1_9STRA) HSP 1 Score: 252 bits (643), Expect = 1.070e-76 Identity = 145/360 (40.28%), Postives = 220/360 (61.11%), Query Frame = 3
Query: 177 MAEGED-VLSLMLYTVLVYPVCKWIMGSKRFG-KRSVWYAMALLAAVAAVHIAWEWRERGPNHYQLLGVGREATPLEIKKAYKRASLELHPDKNPSPEAVDQFAEMKDAYEVLMDQEFRDIYNKLGPEAIRTKQRMDETELLLAIGAQYVVWGVIAYLLTMGAAGAAARAAVFTGEIAMIVLEITNISTGQGSSLLPPWFAPSVTDHEVIWLMRAAFPAYLTGARALCAHRHVDVGAQTRDLLAALQKGHAELLLKLQLLQTEIRDLSAAAAARGGSGNPRLAAAAAGADKAVTVSA----KQSPAAMVRELEQRMKEHSQNIELLATPIQEPVK--------GRSNFWWILGAYVVFYY 1214
M++GED ++S Y + VYP+ W + RF KR + YA++ LA +A E+++RGPNHY L + R +TPLEIKKAYK+ SLELHPDKN SP A ++FA +K+AY+ LMD E R++YNK G E I+ +R DET+LLL I YV WG++A++LT+G A + AR ++TG+IAM++ EI+ + + LP W P T+HE ++LMR+ FPA++ G R LC +VDV Q R + L+ + ++L+ L+ +Q ++ + A+ G GN R G+ A T+S K +P ++E+E+R++ Q E ++ + EPVK G WW + YVVF++
Sbjct: 1 MSQGEDGLVSFFFYILFVYPLTSWFLKPGRFPRKRGLTYAISFLAILALGKTYLEFQDRGPNHYNELHITRASTPLEIKKAYKKMSLELHPDKNKSPTAAEEFARVKEAYDTLMDPELREVYNKFGAEGIKQNRRFDETQLLLEIAVFYVTWGMLAFVLTLGKASSTARNWIYTGQIAMLIAEISLMLQ---ETKLPSWLLPMWTEHEFVFLMRSLFPAFMNGCRCLCGFLYVDVDEQARQKMEHLEAQNKDILMVLRDIQVNMQSIQASG---GSGGNYRSLGG--GSSAAGTLSGGPVIKATPTGKIKEMEERLR---QQRERGSSRVSEPVKAGAAEKAGGGFQVWWAILLYVVFHF 349
BLAST of jgi.p|Trimin1|94083 vs. uniprot
Match: A0A7S0PVN1_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PVN1_9STRA) HSP 1 Score: 250 bits (639), Expect = 5.550e-76 Identity = 144/364 (39.56%), Postives = 214/364 (58.79%), Query Frame = 3
Query: 183 EGEDVLS----LMLYTVLVYPVCKWIMGSKRFG-KRSVWYAMALLAAVAAVHIAWEWRERGPNHYQLLGVGREATPLEIKKAYKRASLELHPDKNPSPEAVDQFAEMKDAYEVLMDQEFRDIYNKLGPEAIRTKQRMDETELLLAIGAQYVVWGVIAYLLTMGAAGAAARAAVFTGEIAMIVLEITNISTGQGSSLLPPWFAPSVTDHEVIWLMRAAFPAYLTGARALCAHRHVDVGAQTRDLLAALQKGHAELLLKLQLLQTEIRDLSAAAAARGGSGNPRLAAAAAGA-----------DKAVTVSAKQSPAAMVRELEQRMKEHSQNIELLATPIQEPVKGRSNFWW---ILGAYVVFYYF 1217
G D LS Y +V+P WI+ RF K+S+ YA+A LAA+AAV EW++RGPNHY LGV R + PLEIK+AY++ SL+LHPDKN SP A D F +K AY+VLMD EFR++YNK G E I+ +R DET+ LL +G Y+ WG++A++LT+G AR FTG + M+V+E+ ++ Q +P W AP+ T++EV+WL+ + FPA++ G R+L + +VD+ QTR LL ALQ+ ++LL L+ +Q ++ L+A+ A GG A AGA V ++ +P ++EL+ R++ + N+ + + SN + ILG + Y F
Sbjct: 5 SGSDDLSGLTGFFFYVFIVHPCTAWILRPGRFERKKSIMYAIAFLAALAAVKTGMEWQQRGPNHYATLGVTRSSNPLEIKRAYRKLSLDLHPDKNQSPTASDDFDAVKQAYDVLMDMEFREVYNKFGKEGIKNNKRFDETQFLLEVGVFYLTWGMMAFMLTLGKKSGEARNWTFTGLLVMLVVEVALMTAQQNP--IPAWLAPTWTEYEVVWLLHSLFPAFMNGCRSLGSFLYVDLDLQTRQLLLALQEQSKDILLVLRDVQIGVQSLAASGGAIGGGPAXXXXARLAGAVXXXGANSTAGGAVVNPMSRATPTGKIKELQDRLQTSNANVAKAVQQLNPESQKSSNLGFYAMILGYIAISYIF 366
BLAST of jgi.p|Trimin1|94083 vs. uniprot
Match: A0A7S3P2D2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P2D2_9STRA) HSP 1 Score: 244 bits (623), Expect = 1.010e-73 Identity = 148/362 (40.88%), Postives = 218/362 (60.22%), Query Frame = 3
Query: 177 MAEGEDVLS--------LMLYTVLVYPVCKWIMGSKRFG-KRSVWYAMALLAAVAAVHIAWEWRERGPNHYQLLGVGREATPLEIKKAYKRASLELHPDKNPSPEAVDQFAEMKDAYEVLMDQEFRDIYNKLGPEAIRTKQRMDETELLLAIGAQYVVWGVIAYLLTMGAAGAAARAAVFTGEIAMIVLEITNISTGQGSSLLPPWFAPSVTDHEVIWLMRAAFPAYLTGARALCAHRHVDVGAQTRDLLAALQKGHAELLLKLQLLQTEIRDLSAAAAARGGS--GNPRLAAAAAGADKAVTVSAKQSPAAMVRELEQRMKEHSQNIELLATPIQ-EPVKGRSN---FWWILGAYVVFYYF 1217
M+EG D S Y +V+P WI+ RF KRS+ YA+A LA +AA+ E + RGPN+Y LLGV R + PLEIK+AYK+ SL+LHPDKNPSP A D+F +K AY+VLMD EFR++YNK G E I+ +R DET+ LL YV +G++A++LT+G AR +FTG + M+V+E+ I T Q ++ P W P +T+H+ +WLM+ FPA++ G R+L + +VD+ AQTR LL ALQ+ + ++LL L+ +Q ++ + + G G PR+A A G + +P ++EL+ R++ + NI + +Q + G+SN + ILG VV Y F
Sbjct: 1 MSEGADTGSEDFSGLSGFFFYVFIVHPATAWILRPGRFERKRSIMYAIAFLAGLAAIKTGLELQARGPNYYSLLGVNRSSNPLEIKRAYKKLSLQLHPDKNPSPTASDEFDAVKQAYDVLMDMEFREVYNKFGKEGIKNNKRYDETQFLLETAIFYVSYGMMAFMLTLGKKSGEARNWIFTGLLVMLVVEVV-IMTSQ-TNPFPAWLFPHMTEHDFVWLMKNLFPAFMNGCRSLGSFLYVDLDAQTRHLLLALQEQNKDILLVLRDVQIGVQTIQTHGVSGGXXXXGVPRVAGAPTGGPMP-----RATPTGKLKELQDRLQSSNTNIAQAVSQLQNDGSAGKSNMGFYLMILGYIVVSYMF 355
BLAST of jgi.p|Trimin1|94083 vs. uniprot
Match: A0A6U5H7Q2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5H7Q2_9STRA) HSP 1 Score: 243 bits (620), Expect = 2.750e-73 Identity = 141/355 (39.72%), Postives = 209/355 (58.87%), Query Frame = 3
Query: 180 AEGEDVLSLMLYTVLVYPVCKWIMGSKRFGKR-SVWYAMALLAAVAAVHIAWEWRERGPNHYQLLGVGREATPLEIKKAYKRASLELHPDKNPSPEAVDQFAEMKDAYEVLMDQEFRDIYNKLGPEAIRTKQRMDETELLLAIGAQYVVWGVIAYLLTMGAAGAA-ARAAVFTGEIAMIVLEITNISTGQGSSLLPPWFAPSVTDHEVIWLMRAAFPAYLTGARALCAHRHVDVGAQTRDLLAALQKGHAELLLKLQLLQTEIRDLSAAAAARGGSGNPRLAAAAAGADKAVTVSAKQ------SPAAMVRELEQRMKEHSQNIELLATPIQEPVKGRSN--FWWILGAYVVFYY 1214
+E + + S Y +V+P W + RF K+ ++ YA+ LA +A+V EWR+RGPNHY LL V R ++PLEIK+AYK+ SLELHPDKNP P A DQF +K AY+VLMD E R +YNK G E IRT +R E ++LL +G Y W ++ ++LT+G G AR ++T +I MI+ E+ S+ + LP WF PS+T+ E+IWL+ FPAY+ G RA+ AH VD+ AQTR LL ALQ+ + ++LL L+ +Q I+ L + + +G +T SA + +P V+EL++R++ + + + IQ + SN F+ ++ Y V Y
Sbjct: 13 SELDSLTSFFFYVFIVHPATAWFLKPGRFQKKQALAYAIGFLALLASVKTGMEWRDRGPNHYTLLRVDRNSSPLEIKRAYKKLSLELHPDKNPDPNAADQFHRVKSAYDVLMDMELRVVYNKYGDEGIRTNKRYSEYQMLLEVGIFYATWAMLVFVLTLGKKGNGNARQWIYTVQIMMIIAEVALYSSEKP---LPEWFLPSITEAEIIWLLHTLFPAYMNGCRAIGAHLFVDLDAQTRQLLFALQEQNKDILLVLRDVQIGIQSLESKGVSSNSTGGG-----------VITTSATRGPVPRITPTGKVKELQERLRSSNTKVAGVMKEIQGDGEKSSNLGFYAMIVGYCVLNY 353
BLAST of jgi.p|Trimin1|94083 vs. uniprot
Match: A0A7S0GF48_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GF48_9STRA) HSP 1 Score: 241 bits (616), Expect = 9.640e-73 Identity = 134/342 (39.18%), Postives = 211/342 (61.70%), Query Frame = 3
Query: 201 SLMLYTVLVYPVCKWIMGSKRFGK-RSVWYAMALLAAVAAVHIAWEWRERGPNHYQLLGVGREATPLEIKKAYKRASLELHPDKNPSPEAVDQFAEMKDAYEVLMDQEFRDIYNKLGPEAIRTKQRMDETELLLAIGAQYVVWGVIAYLLTMGAAGAAARAAVFTGEIAMIVLEITNISTGQGSSLLPPWFAPSVTDHEVIWLMRAAFPAYLTGARALCAHRHVDVGAQTRDLLAALQKGHAELLLKLQLLQTEIRDLSAAAAARGGS-GNPRLAAAAAGADKAVTVSAKQSPAAMVRELEQRMKEHSQNIELLATPIQEPVKGRSN--FWWILGAYVVFYY 1214
S Y +V+P WI+ RF + +S+ YA+A LAA+AAV E E+GPNHY LL V R ++PL+IK+AYK+ SL LHPDKN +P+A +QF +K +Y+VL+D E+R++YNK G I + +R DE+ + +G YV WG++ Y+LT+G AR FTG I M+V+EI +++ + LP W P+ T++E+IWL+ FPA++ G R++ ++ +VD+ + R LL ALQ+ + ++LL L+ +Q I++L + + G GN L + AG A V+A+ +P ++EL+ R++ + NI A Q G S+ F+ ++ AYV Y
Sbjct: 10 SFFFYVFIVHPATAWILRPGRFERSKSIMYAIAFLAALAAVKTGIEMNEKGPNHYSLLNVDRASSPLDIKRAYKKLSLVLHPDKNDAPDAEEQFDNLKKSYDVLIDMEYREVYNKFGAAGIESNKRFDESTFFMELGVFYVTWGIMVYMLTLGKKSGEARQWTFTGLILMLVIEIAIMTSTENP--LPEWLFPTTTEYEMIWLLHTLFPAFMNGCRSMGSYLYVDLDEKQRALLKALQEQNQDILLVLRDVQIGIQNLQTSGVSSGPRLGNSTLTPSTAGLSAASDVTARATPTGKIKELQNRLQPNKPNIAPTANQAQAKNTGSSSLGFYGMIVAYVAISY 349
BLAST of jgi.p|Trimin1|94083 vs. uniprot
Match: A0A448Z810_9STRA (J domain-containing protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448Z810_9STRA) HSP 1 Score: 238 bits (607), Expect = 2.450e-71 Identity = 144/358 (40.22%), Postives = 221/358 (61.73%), Query Frame = 3
Query: 180 AEGEDVLSL---MLYTVLVYPVCKWIMGSKRFG-KRSVWYAMALLAAVAAVHIAWEWRERGPNHYQLLGVGREATPLEIKKAYKRASLELHPDKNPSPEAVDQFAEMKDAYEVLMDQEFRDIYNKLGPEAIRTKQRMDETELLLAIGAQYVVWGVIAYLLTMGAAGAAARAAVFTGEIAMIVLEITNISTGQGSSLLPPWFAPSVTDHEVIWLMRAAFPAYLTGARALCAHRHVDVGAQTRDLLAALQKGHAELLLKLQLLQTEIRDLSAAAAARGGSGNPRLAAAAAG-----ADKAVTVSAKQSPAAMVRELEQRMKEHSQNIELLATPIQEPVKGRSNFWW---ILGAYVVFYYF 1217
A G+D L Y +V+P+ WI+ RF K+S+ YA+A LAA+AA+ E +++GPN+YQ+L V RE+ PLEIK++YK+ SL+LHPDKN SP A D+F +K AY+V+MD E RD+YNK G E + +R ET+ L+ + YV W V+ +LLTMG AR VFTG I M+V+E+ + T Q ++ LP W P++T+++++ M + FPA++ G R+L ++ VDV AQ R L ALQ+ + ++LL L+ +Q ++++ A GG G RLA + G AD A V++K +P ++EL++R++ + N+ ++ K SNF + ILG V+ Y F
Sbjct: 7 AGGDDFSGLGGFFFYMFIVHPITAWILKPGRFERKKSIMYAIAFLAALAAIKTGLEMQQQGPNYYQILDVTRESNPLEIKRSYKKLSLKLHPDKNKSPNAADEFDRVKQAYDVIMDLELRDVYNKFGKEGVANNKRYSETQFLIEVAIFYVSWAVMTFLLTMGKKSGQARDWVFTGMIVMLVVEVV-VMTSQ-TNPLPTWLFPTLTEYDLVKTMHSLFPAFMNGCRSLGSYLFVDVDAQLRQFLLALQEQNKDILLVLRDVQIGVQNIQA----HGGGGGHRLAGPSTGNIPVTADGA-DVASKATPTGKIKELQERLQYSNANVAQAVQSLKTENKS-SNFGFYGMILGYIVISYLF 356 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|94083 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11002 ID=mRNA_11002|Name=jgi.p|Trimin1|94083|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1323bp|location=Sequence derived from alignment at Contig_82:608603..613615+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TGCCTGAGGACGCTAACATCCCCGGTTCTGGTGGTGACTGAGGATCTACGback to top protein sequence of jgi.p|Trimin1|94083 >Trimin1|94083|CE94082_127 ID=Trimin1|94083|CE94082_127|Name=jgi.p|Trimin1|94083|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=350bp MAEGEDVLSLMLYTVLVYPVCKWIMGSKRFGKRSVWYAMALLAAVAAVHIback to top mRNA from alignment at Contig_82:608603..613615+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11002 ID=mRNA_11002|Name=jgi.p|Trimin1|94083|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5013bp|location=Sequence derived from alignment at Contig_82:608603..613615+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_82:608603..613615+ >mRNA_11002 ID=mRNA_11002|Name=jgi.p|Trimin1|94083|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1050bp|location=Sequence derived from alignment at Contig_82:608603..613615+ (Tribonema minus UTEX_B_3156 )back to top |