mRNA_10911 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|350743
Unique NamemRNA_10911
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|350743 vs. uniprot
Match: A0A836C9M6_9STRA (SART-1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9M6_9STRA)

HSP 1 Score: 1016 bits (2627), Expect = 0.000e+0
Identity = 818/818 (100.00%), Postives = 818/818 (100.00%), Query Frame = 1
Query:    1 MKDPVAGSDGGSELAAPKQPKTVRIDYGDEXXXXXXXXXXXXXXXXXXXSSPSRSDMQLRGDMAPXXXXXAGGDVVYEKIKPAVSESNGEISMSIEETNRVRAMLGLRPLAVGNSKEQQAVDNLRRKKEEEAKVRELADIEARLAKARNRRQLHERLKGSTLGEVQAGEDGSVLSAADWVGKSRQRAAEAEEQRLLAEKXXXXXXXXXXXXXXXXXXGKGPRYTEKDLAGLRVAHGADAFDLGDSAILTLKDAEVLETDDHGVVRGLADGEDELENVAMTEAQRRADAEARAKRAAQGAYRAYDDEEFEAAGPGGAPPQRKILSQYDEELERXXXXXXXXXXXGEAAAAVKPTAAEAEARVAESLHTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFDAALXXXXXXXXXXLQDETPFMXXXXXXXXXXXXXXXXELDGDLAASLARARRLAQLKERAQARHESAAEVAERIAKAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEGIVFTPATEFTSRMQAVLQERVREREAALRKEAERAARERGAGHVTVKHDAKREEAXXXXXXGGAWEEQAEAMDVEGEGEAGEGGSDAEGDDQAGFMLRQPLVRSSMAAALSLLQQSGDLKHKTELAGRAKDKREFAGEAPDDDGSGAGAVKLEYRDEFGRQLTRAEAFRQLNYQFHGYGPGKKKQEKRLKALQEQRMRERAADVSTISALRKVQEVTARPFLVVSGXXXXXXXXXXXVLPERLDLK 2454
            MKDPVAGSDGGSELAAPKQPKTVRIDYGDEXXXXXXXXXXXXXXXXXXXSSPSRSDMQLRGDMAPXXXXXAGGDVVYEKIKPAVSESNGEISMSIEETNRVRAMLGLRPLAVGNSKEQQAVDNLRRKKEEEAKVRELADIEARLAKARNRRQLHERLKGSTLGEVQAGEDGSVLSAADWVGKSRQRAAEAEEQRLLAEKXXXXXXXXXXXXXXXXXXGKGPRYTEKDLAGLRVAHGADAFDLGDSAILTLKDAEVLETDDHGVVRGLADGEDELENVAMTEAQRRADAEARAKRAAQGAYRAYDDEEFEAAGPGGAPPQRKILSQYDEELERXXXXXXXXXXXGEAAAAVKPTAAEAEARVAESLHTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFDAALXXXXXXXXXXLQDETPFMXXXXXXXXXXXXXXXXELDGDLAASLARARRLAQLKERAQARHESAAEVAERIAKAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEGIVFTPATEFTSRMQAVLQERVREREAALRKEAERAARERGAGHVTVKHDAKREEAXXXXXXGGAWEEQAEAMDVEGEGEAGEGGSDAEGDDQAGFMLRQPLVRSSMAAALSLLQQSGDLKHKTELAGRAKDKREFAGEAPDDDGSGAGAVKLEYRDEFGRQLTRAEAFRQLNYQFHGYGPGKKKQEKRLKALQEQRMRERAADVSTISALRKVQEVTARPFLVVSGXXXXXXXXXXXVLPERLDLK
Sbjct:    1 MKDPVAGSDGGSELAAPKQPKTVRIDYGDEXXXXXXXXXXXXXXXXXXXSSPSRSDMQLRGDMAPXXXXXAGGDVVYEKIKPAVSESNGEISMSIEETNRVRAMLGLRPLAVGNSKEQQAVDNLRRKKEEEAKVRELADIEARLAKARNRRQLHERLKGSTLGEVQAGEDGSVLSAADWVGKSRQRAAEAEEQRLLAEKXXXXXXXXXXXXXXXXXXGKGPRYTEKDLAGLRVAHGADAFDLGDSAILTLKDAEVLETDDHGVVRGLADGEDELENVAMTEAQRRADAEARAKRAAQGAYRAYDDEEFEAAGPGGAPPQRKILSQYDEELERXXXXXXXXXXXGEAAAAVKPTAAEAEARVAESLHTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFDAALXXXXXXXXXXLQDETPFMXXXXXXXXXXXXXXXXELDGDLAASLARARRLAQLKERAQARHESAAEVAERIAKAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEGIVFTPATEFTSRMQAVLQERVREREAALRKEAERAARERGAGHVTVKHDAKREEAXXXXXXGGAWEEQAEAMDVEGEGEAGEGGSDAEGDDQAGFMLRQPLVRSSMAAALSLLQQSGDLKHKTELAGRAKDKREFAGEAPDDDGSGAGAVKLEYRDEFGRQLTRAEAFRQLNYQFHGYGPGKKKQEKRLKALQEQRMRERAADVSTISALRKVQEVTARPFLVVSGXXXXXXXXXXXVLPERLDLK 818          
BLAST of jgi.p|Trimin1|350743 vs. uniprot
Match: D8LC27_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC27_ECTSI)

HSP 1 Score: 330 bits (847), Expect = 5.700e-95
Identity = 357/803 (44.46%), Postives = 448/803 (55.79%), Query Frame = 1
Query:  223 VVYEKIKPAVSESNGEISMSIEETNRVRAMLGLRPLAVGNS------KEQQAVDNLRRKKEEEAKVRELADIEARLAKARNRRQLHERLKGSTLGEVQAGEDGSVLSAADWVGKSRQRAAEAEEQRLLAEKXXXXXXXXXXXXXXXXXXGKGPR---YTEKDLAGLRVAHGADAFDLGDSAILTLKDAEVLETDDHGVVRGLADGEDELENVAMTEAQRRADAEARAKRAAQGAYRAYDDEEFEAA-GPGGAPPQRKILSQYDEELERXXXXXXXXXXXGEAAAAVKPTAAEAEARVAESLHT------------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFDAALXXXXXXXXXXLQDE------TPFMXXXXXXXXXXXXXXXXELDGDLAASLARARRLAQLKERAQARHESAAEVAERIAKAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAE-----------------GIVFTPATEFTSRMQAVLQERVREREAA-----LRKEAERAARERGAGH----------VTVKHDAKRE---EAXXXXXXGGAWEEQA----------EAMDVEGEGEAGEGGSDAEGDDQAGFMLRQPLVRSSMAAALSLLQQSGDLKHKTELAGRAKDKREFAGEAPDDDGSGAGAVKLEYRDEFGRQLTRAEAFRQLNYQFHGYGPGKKKQEKRLKALQEQRMRERAADVSTISALRKVQEVTARPFLVVSG 2394
            V  EKIKP   E+ GEISMS+EETNRVRAMLGL+PL VG S      +E+ AV+N+R K+EEE + REL ++E RL KAR +RQL+E+LKG TLGEV+ G++  V+SAADWV +SR++A   EE+RLLA +                  G G R   Y  ++LAGL+V HGA +F+ GDS ILTLKD  +L+ D+HG V GL D EDELENV M EA+RR + +  A RA +GAY+AYDDEEFE   GPG    +RK+LS YDE  +               AAA +      + +V ESL                      XXXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                          RFD AL          L D           XXXXXXXXX       ELD DL  SLARARRLAQ+K++A+AR       A R A A+                 XXXXXXXXXXXX A                  G+VFT  TEFTSR++A L+ER R+   A     +++E E    ++G  H          V  + D K+E   EA         W  +           +A ++E   E  E   D++ D+Q GF+ +QPL ++ MAA L+LL+ SG L  K   +GRAKD R+  GEA +         KLEYRDE+GR++TR EAFR L Y+FHGYG GKKKQEKRLK ++E++ +ERA D+  +  L++ QE+T + F+VV G
Sbjct:  120 VDVEKIKPNTEENKGEISMSVEETNRVRAMLGLKPLNVGGSASGKPTEEEIAVENMRLKREEEEQARELKELETRLQKARTKRQLNEKLKGDTLGEVKPGDE-EVVSAADWVNRSRKKAVAMEEERLLARQRERILEEQEMELANGGGDGDGRRKAAYGAENLAGLKVTHGAASFEAGDSVILTLKDQGLLDEDEHGRVTGLKDDEDELENVHMKEAERRKELDKEAIRAKRGAYQAYDDEEFEGEIGPGA---ERKVLSHYDEAKKEGPRLTLGQGGTARDAAAAEGGEEGEKKKVLESLKVDVKDASEYYTTEEMAKFKKPXXXXXXXXXXXXXXXXXXXLGLEAALHDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHGSRASRAARLAASEKADRGEDKRKRFDTALARAGERASEKLADSFAKPPXXXXXXXXXXXXXXEPEAFAEELDSDLGVSLARARRLAQMKDKAKARKSRDIGEAVRDAMARKKVKTEAAEEGPKAEDNXXXXXXXXXXXXMAVDXXXXXVSVKEEVGGDGGMVFTSTTEFTSRLEATLEERKRDSIKAAERTRVKEELEAKKAKQGKQHGKDDAMDVDTVKGEGDVKKEAEDEAAKTKAKRSRWTTKKXXXXXXXXXPDADEIEAMLERAE--EDSDDDEQMGFLHKQPLAKNGMAATLALLRPSGVLNEKFHRSGRAKDARKHHGEAEETREDRESGAKLEYRDEWGREITRKEAFRNLCYKFHGYGSGKKKQEKRLKLVEEEKKKERAMDLQRLKTLQQTQEITKQAFVVVQG 916          
BLAST of jgi.p|Trimin1|350743 vs. uniprot
Match: A0A7S3URM7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URM7_HETAK)

HSP 1 Score: 172 bits (436), Expect = 1.080e-44
Identity = 127/247 (51.42%), Postives = 168/247 (68.02%), Query Frame = 1
Query:  268 EISMSIEETNRVRAMLGLRPLAVGN----SKEQQAVDNLRRKKEEEAKVRELADIEARLAKARNRRQLHERLKGSTLGEVQAGEDGSVLSAADWVGKSRQRAAEAEEQRLLAEKXXXXXXXXXXXXXXXXXX---GKGPRYTEKDLAGLRVAHGADAFDLGDSAILTLKDAEVLETDDHGVVRGLADGEDELENVAMTEAQRRADAEARAKRAAQGAYRAYDDEEFEAAGPGGAPPQRKILSQYDEE 987
            E+S SIEETNR+RA LGL+PL +      S EQ AVDN+R+KKEEE + RELA+IEAR+A+AR +R L+E+L+G  LGE+  GE   + SAADWV +SRQ+  + EE       XXXXXXXXXXXXXXXXX    GKG +Y   DLAG+ VAH     + G + ++TL+DAEVLE D+HGV RGLAD  D L NV + + +R  +   + ++ A+G Y+ YDD EFE     G   +R +L++YDE+
Sbjct:    3 EVSCSIEETNRIRAALGLKPLKLEKGDEQSAEQIAVDNMRKKKEEEGRQRELAEIEARIARARKKRALNEKLEGKRLGELAEGEQ-EIGSAADWVRRSRQKQIDQEEXXXXXXXXXXXXXXXXXXXXXXXXDAKKGKG-KYGGTDLAGIEVAHDLKGLEAGGTVVMTLEDAEVLERDEHGVARGLADRTDRLMNVNLRDDERTKELLEKKRQTARGDYQGYDDAEFEEGAAIGPGARRAVLTKYDEQ 247          
BLAST of jgi.p|Trimin1|350743 vs. uniprot
Match: A0A024TXF0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TXF0_9STRA)

HSP 1 Score: 170 bits (430), Expect = 3.690e-40
Identity = 216/739 (29.23%), Postives = 318/739 (43.03%), Query Frame = 1
Query:  211 AGGDVVYEKIKPAVSESNGEISMSIEETNRVRAMLGLRPLAVGNSKEQQAVDNLRRKKEEEAKVRELADIEARLAKARNRRQLHERLKGSTLGEVQAGEDGSVLSAADWVGKSRQRAAEAEEQRLLAEKXXXXXXXXXXXXXXXXXXGKGPRYTEKDLAGLRVAHGADAFDLGDSAILTLKDAEVLETDDHGVVRGLADGEDELENVAMTEAQRRADAEARAKRAAQGAYRAYDDEEFEAAGPGGAPPQRK---ILSQYDEELERXXXXXXXXXXXGEAAA-AVKPTAAEAEARVAESLHTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFDAALXXXXXXXXXXL-QDETPFMXXXXXXXXXXXXXXXXELDGDLAASLARARRLAQLKERAQARHESAAEVAERIAKAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEGIVFTPATEFTSRMQAVLQERVREREAALRKEAERAAR--ERGAGHVTVKHDAKREEAXXXXXXGGAWEEQAEAMDVEGEGEAGEGGSDAEGDDQAGFMLRQPLVRSSMAAALSLLQQSGDLKHKTEL--AGRAKDKREFAGEAPDDDGSGAGAVKLEYRDEFGRQLTRAEAFRQLNYQFHGYGPGKKKQEKRLKALQEQRMRERAAD--VSTISALRKVQEVTARPFLVVSG 2394
            + G V     K + +E NGEISM+IEETN++R  +GL+PL + N+ +++ V NL + +E+ A+      ++  LAK++ +RQ  E+LKG +LGE    E     SA DWV +SR   A A                               +Y   DL GL VAH A AF+ GD  ILTLKD  VL TDD     G+ D  DELENV + EA  RA+ +AR K+A    Y  +DD+EF     G     RK   +L+QYDEE E            G+     V+P             H A                                              XXXXXXXXXXX                                   D A+          L +                      ++D +L  SLAR+RR+A +   A+A+ ++++        ++                               + IVF+ AT+F  R++  L+ER   R A        A+    R    VTV+ +   ++         A EE  +               ++E +D+  + + +PLV++ MAA L+LL+  GDLK   ++  AGRA D R+   +  +D+      VKL+YRDEFGR LT+ EAFR+++Y+FHG+ PGKKKQEKRLK ++E+ M+++     V+ +  L K Q+V  +  +V+SG
Sbjct:   91 SSGGVSSAAPKVSTTEKNGEISMTIEETNKLRLSMGLKPLRLTNASKEKEV-NLSKSREDVAEEVRQKALQDALAKSKQKRQFTEKLKGQSLGEALRSE--GPKSALDWVRQSRTSKAPAIAPATSTSAATTA------------------KYDAADLKGLTVAHDAHAFEEGDEVILTLKDQRVL-TDDRS---GVNDESDELENVDLREADSRAERDARMKKATGPVYSGFDDDEFTTILGGSKKGVRKPVRLLAQYDEEEELAALRESKKFALGDVGVHQVQPK------------HPAKSQQVDGDDDDGPVSISLASHKKQHIEEYFTASEMAVFSKKQSKKLXXXXXXXXXXXADDDTETTASLVEQLEVEASRNQPADHGKRSAEPSDVAIDEITRRNRFELARQRANDKVKTVMDRMKQQPVAVEDIDEELGESLARSRRMALVVAAAKAKQDTSS--------SETSNDLRVLQQISAFKEESAVPHGGDASHGPIQTIVFSEATDFDVRVKNALEEREAARAAXXXXXXXGASSVPARPTKTVTVEEELSEDDKSNDI----AMEETKD---------------ESESEDENSWGVEEPLVQTGMAATLALLRNRGDLKETVQVRQAGRANDHRD---KHIEDELQVKDGVKLDYRDEFGRLLTKKEAFRRISYRFHGHTPGKKKQEKRLKQIKEELMQQKNLGNVVARMQTLDKRQKVAKQAHVVLSG 762          
BLAST of jgi.p|Trimin1|350743 vs. uniprot
Match: A0A7S1XUI2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUI2_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.180e-36
Identity = 106/264 (40.15%), Postives = 150/264 (56.82%), Query Frame = 1
Query:  211 AGGDVVYEKIKPAVSESNGEISMSIEETNRVRAMLGLRPLAVGN--SKEQQAVDNLRRKKEEEAKVRELADIEARLAKARNRRQLHERLKGSTLGEVQAGEDGSVLSAADWVGKSRQRAAEAEEQRLLAEKXXXXXXXXXXXXXXXXXXGKGPRYTEKDLAGLRVAHGADAFDLGDSAILTLKDAEVLETDDHGVVRGLADGEDELENVAMTEAQRRADAEARAKRAAQGAYRAYDDEEFEAAGPG-GAPPQRKILSQYDEELE 993
            A GD  +  ++  V+E  GEIS S+EETNRVRA+LGL+PL  G   SK++ AV+N +R KEEEA  +   +           R+ + +++G TLG+   G+DG  +S+  WV +SR +A E E ++  A +                    G  YT  DL G+ V+H  ++F+ G   ILTLKD +VL  D+HG + GL +  DELENV M EA R    + R KR A GAY  +DD+EFE      GAP ++K+L QYD++ E
Sbjct:    2 ASGDGDFH-VRAQVTEKGGEISASVEETNRVRALLGLKPLRTGKEKSKDEIAVENFKRVKEEEAAKKRAQEAXXXXXXXXXXRERNAKIEGPTLGD---GDDG--VSSVAWVQRSRAKAKEQEARKKEALERAAKGEV-------------GADYTSSDLVGMEVSHDVNSFEEGREVILTLKDTDVLARDEHGNLAGLNEDGDELENVHMAEASREDAKKRRKKRLAAGAYTGWDDDEFEEDAIALGAPKKKKLLRQYDQDDE 246          
BLAST of jgi.p|Trimin1|350743 vs. uniprot
Match: A0A5D6XYL6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYL6_9STRA)

HSP 1 Score: 149 bits (376), Expect = 2.560e-33
Identity = 270/771 (35.02%), Postives = 360/771 (46.69%), Query Frame = 1
Query:  238 IKPAVSESNGEISMSIEETNRVRAMLGLRPLAVGNSKEQQAVDNLRRKKEEEAKVRELADIEARLAKARNRRQLHERLKGSTLGEVQAGEDGSVLSAADWVGKSRQRAAEAEEQRLLAEKXXXXXXXXXXXXXXXXXXGKGPRYTEKDLAGLRVAHGADAFDLGDSAILTLKDAEVLETDDHGVVRGLADGEDELENVAMTEAQRRADAEARAKRAAQGAYRAYDDEEFEAAGPGGAPPQRKILSQYDEELERXXXXXXXXXXX---------GEAAA---------AVKPTAAEAEARVAESLHTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFDAALXXXXXXXXXXLQDETPFMXXXXXXXXXXXXXXXXELDGDLAASLARARRLAQLKERAQARHESAAE----------------VAERIAKAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEG-------IVFTPATEFTSRMQAVLQERVREREAALRKEAERAARERGAGHVTVKHDAKREEAXXXXXXGGAWEEQAEAMDVEGEGEAGEGGSDAEGD-----DQAGFMLRQPLVRSSMAAALSLLQQSGDLKHKT--ELAGRAKDKREFAGEAPDDDGSGAGAVKLEYRDEFGRQLTRAEAFRQLNYQFHGYGPGKKKQEKRLKALQE----QRMRERAADVSTISALRKVQEVTARPFLVVSG 2394
            ++ A  E NGEISMSIEETNRVRA LGL+PL++G  K   +V ++++   E    R  A     LA+++ RR L  +L G++LGE       +  SA DWV +SR   A  E +   A+ XXXXX              +   Y    LAG+ V H   AF+ GD  +LTLKD  VL  D +     L D +DEL NV M+E  RRA  + RA RA   AY  YDD+EF A G     P  ++L+QYD+E +R                    G++A          AV   A +   R+ E                    XXXXXXXXXXXXXXXXXXXXXXXXXXX                 XXXXXXXXXXXXXXXX               RF  A           L   +                    +D +L+ASLAR RRLAQLK  + ++  +  +                V++ I            XXXXXXXXXX            A+        +VF  AT+F SR++  +++R  + +AA    A RAA     G         +  A        +    A     +G+ E   GGSD++ D     D   +   QPLV + MAA L+LL+++GDL+        GRA D+RE      +D       VKL+YRDEFGR LT+ EAFR L+Y+FHG+ PGKKK+EKR+K L+E    Q++         +  L K Q+V+ +  +V+SG
Sbjct:   82 VRAATVEKNGEISMSIEETNRVRAALGLKPLSLG-PKAASSVVSVQKSAAELDAERARAQXXXXLAQSKTRRALTHKLDGASLGEQLKA--AAASSALDWVKQSR---AVMESETATAQXXXXXXTML-----------RQDAYDASALAGMVVGHDLKAFEGGDEVVLTLKDTRVLAGDGND----LNDEQDELVNVEMSERDRRAAEKQRAARAFMPAYTGYDDDEFIAVGGRLKKPAARLLAQYDDERDRDARQQAQKFTLDSSGNTRTAGDSAGDSHAADDDDAVVSLAMDKTKRIDEFFTQDEVDAQFAKRKGKKLRXXXXXXXXXXXXXXXXXXXXXXXXXXXVRRLEAEALKHASNDRGXXXXXXXXXXXXXXXXNGDSKLSGVEEASLLRFQEARERANATASSAL---SAMKKRRRVAALDDADVLDDAMDLELSASLARTRRLAQLKSVSSSQVTAPGDDEKPTPLTSEDRITALVSQTIGAEPAGTNDAASXXXXXXXXXXAPAVVGHVFGVSAQEQAASENTVVFNDATDFESRLRNAMEQRSAQFQAAAAANAGRAA-----GRQVAALSGTQSIASSSASGVASRAAVATXXAADGDEEMKSGGSDSDDDRETKGDGEVWGEEQPLVGAGMAATLALLRKTGDLRETRVERQTGRANDQRE---RDVNDALRVKDGVKLDYRDEFGRLLTKKEAFRVLSYKFHGHEPGKKKKEKRIKQLKEELAAQKLLSGEGSSKMMKVLEKKQKVSQQAHVVLSG 820          
BLAST of jgi.p|Trimin1|350743 vs. uniprot
Match: A0A8K1CWD9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CWD9_PYTOL)

HSP 1 Score: 147 bits (371), Expect = 8.600e-33
Identity = 221/735 (30.07%), Postives = 315/735 (42.86%), Query Frame = 1
Query:  244 PAVSESNGEISMSIEETNRVRAMLGLRPLAVGNSKEQQAVDNLRRKKEEEAKVRELADIEARLAKARNRRQLHERLKGSTLGEVQAGEDGSVLSAADWVGKSRQRAAEAEEQRLLAEKXXXXXXXXXXXXXXXXXXGKGPRYTEKDLAGLRVAHGADAFDLGDSAILTLKDAEVLETDDHGVVRGLADGEDELENVAMTEAQRRADAEARAKRAAQGAYRAYDDEEFEAAGPGGAPPQRKILSQYDEELERXXXXXXXXXXXGEAAAAVKPTAAEAEARVAESLH-----------TAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFDAALXXXXXXXXXXLQDETPFMXXXXXXXXXXXXXXXXELDGDLAASLARARRLAQLKERAQARHESAAEVAERIAK--AKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEGIVFTPATEFTSRMQAVLQERVREREAALRKEAERAARERGAGHVTVKHDAKREEAXXXXXXGGAWEEQAEAMDVEGEGEAGEGGSDAEGDDQAGFMLRQPLVRSSMAAALSLLQQSGDLKHKT--ELAGRAKDKREFAGEAPDDDGSGAGAVKLEYRDEFGRQLTRAEAFRQLNYQFHGYGPGKKKQEKRLKALQEQRMRERA----ADVSTISALRKVQEVTARPFLVVS 2391
            P  +E NGEISMSIEETN++R  LGL+PL+VG  KE+  V NL++  E+ A+ +E  +I+  L ++R +R+L ++L G ++G+    ++ +  SA DWV +SRQ AA+                             +G  Y    LAG+ V+H  DAFD G   +LTLKD+ VL T+D G V    D  DEL NV ++E  R    + +A+RA    Y  YDD+EF   G      ++K+L+ YD + E+             A  +     A+A+A   E+L            +                    XXXXXXXXXXXXXXXXXXX                                                    RF  A           L+  T                    LD +L+A++AR+R+LAQLK   Q + E  A +  R AK  A                               +  +VF  AT+F +R+++ +++R  + +A                             XXXXXX               E + GE   D            QPLV   M A L+LL+++G+L+       AGRA D R+      DD+      VKL+YRDEFGR LT+ EAFR L+Y+FHG+ PGKKKQEKRLK L+E+   ++A         +  L K Q+   + F+V+S
Sbjct:   82 PRTTEENGEISMSIEETNKLRISLGLKPLSVGPKKEKNLV-NLQKTSEQLAEEKERDEIKKALEQSRRKRELTQKLAGKSIGQEL--KESAASSALDWVKQSRQSAAQXXXXXXXXXXKQKEA--------------EGTSYDASALAGMTVSHDVDAFDEGVDVVLTLKDSRVL-TEDGGDVN---DEADELMNVELSERDRLETRQKQAQRANMPVYTGYDDDEFIQMGV--TKKKKKLLAHYDADEEQKADEEAKKFTLDAAGRSQISAKAKAKAAQDEALDGVEVVSLSMNKSKAMDDYYTQEEMEATFAKKSXXXXXXXXXXXXXXXXXXXEGDPSALLAQLEAEAQQNSKGSNDRGKRRRPVHNDDDGRDHVLASAEEEGLRRFQEAREKASAVASSALEASTGIKKKKRRAAAWEDGEDA--LDLELSANVARSRQLAQLK---QQQEEGGATLQSREAKLAALVSQAIGDEPDKVDGDVSMVAAGNVFVETESSNTVVFNDATDFETRLRSAMEQRTAQFQATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXESKTGESWGD-----------EQPLVAGGMGATLALLRRTGELRETRVERQAGRANDSRD---RNVDDEFRVKDGVKLDYRDEFGRLLTKKEAFRMLSYKFHGHKPGKKKQEKRLKQLKEELEAQKALSGEGSTKMMKVLEKKQQHAQQAFVVLS 769          
BLAST of jgi.p|Trimin1|350743 vs. uniprot
Match: A0A067C1I0_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C1I0_SAPPC)

HSP 1 Score: 144 bits (364), Expect = 3.380e-32
Identity = 225/724 (31.08%), Postives = 312/724 (43.09%), Query Frame = 1
Query:  232 EKIKPAVSESNGEISMSIEETNRVRAMLGLRPLAVGNSKEQQAVDNLRRKKEEEAKVRELADIEARLAKARNRRQLHERLKGSTLGEVQAGEDGSVLSAADWVGKSRQRAAEAEEQRLLAEKXXXXXXXXXXXXXXXXXXGKGPRYTEKDLAGLRVAHGADAFDLGDSAILTLKDAEVLETDDHGVVRGLADGEDELENVAMTEAQRRADAEARAKRAAQGAYRAYDDEEFEAAGPGGAPPQRKILSQYDEELERXXXXXXXXXXXGEAAAAVKPTAAEAEARVAESLHTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFDAALXXXXXXXXXXLQDETPFMXXXXXXXXXXXXXXXXELDGDLAASLARARRLAQLKERAQARHESAAEVAERIAKAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEGIVFTPATEFTSRMQAVLQERVREREAALRKEAERAARERGAGHVTVKHDAKREEAXXXXXXGGAWEEQAEAMDVEGEGEAGEGGSDAEGDDQAGFMLRQPLVRSSMAAALSLLQQSGDLKHKTEL--AGRAKDKRE--FAGEAPDDDGSGAGAVKLEYRDEFGRQLTRAEAFRQLNYQFHGYGPGKKKQEKRLKALQEQRMRERAADVSTISALRKVQEVTARPFLVVS 2391
            E  KP V+ESNGEISMS+EETN++R  +GL+PL +   + ++   NL + +E+ A       ++  L K++ +R+   +++G +LGE  A +  S L   DWV +SR  A                                   Y+  DL GL VAH A +F+ G+  ILTLKD  +L TDD G V    D +DELENV +TEA +R + E  AKRAA   Y  +DDEEF      G  P++++L+QYDEE +              A +A+     E  +  A ++                                                                         XXXXXXXXXXXXXXXXXXXX      XXXXXXXXXX        XXXXX           ++  D AAS                                                              A  IVF+ AT+F  R++  +  RV    A++ K A        A  V V  +  + +A       GA E+                       D+A + + +PLV++ MAA L+LL+  GDL+   +L  AGRA D R+  F  E    DG     VKL+YRDEFGR LT+ EAFRQL+Y+FHG+ PGKKKQEKRLK L+E+  +++    + + +L + Q+ T +  LV+S
Sbjct:   62 EDSKPKVTESNGEISMSVEETNKLRISMGLKPLRLTKPESKEV--NLAKSREDLAAEAHQKQLKETLEKSKRKREYTAKMQGKSLGETLAEDATSTL---DWVRRSRTTAP-------------------APLPGTKAPAAASSTYSAMDLEGLTVAHDAQSFEEGEDVILTLKDNRIL-TDDMGNVN---DADDELENVTLTEADKRKEREEMAKRAAGPVYSGFDDEEFSTVL--GDRPKKRLLTQYDEEDDMKEARARKKF----ALSALGGHVVETPSLPASAVSAGTVTLGSIKQFQAMDDYYTPDEMTVFNKKKTKKLRKEGATKDLVEQLEAEARASAVDHGKRRADAASAVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIESNEARVLSQVAADSAAS-----------------------------------------------------HNIHRDAPTANTIVFSEATDFDVRVKNAMDARV----ASVDKLA--------APTVDVDEEETKADAPADDAMQGADEDXXX--------------------DEATWGVEEPLVQTGMAATLALLRNRGDLRDDIQLRQAGRANDHRDRSFNEELQIKDG-----VKLDYRDEFGRLLTKKEAFRQLSYRFHGHAPGKKKQEKRLKQLKEELAQQKTNVSTKMQSLDRRQKQTKQAHLVLS 661          
BLAST of jgi.p|Trimin1|350743 vs. uniprot
Match: A0A3R7DL48_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7DL48_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.710e-30
Identity = 108/256 (42.19%), Postives = 142/256 (55.47%), Query Frame = 1
Query:  244 PAV---SESNGEISMSIEETNRVRAMLGLRPLAVGNSKEQQAVDNLRRKKE---EEAKVRELADIEARLAKARNRRQLHERLKGSTLGEVQAGEDGSVLSAADWVGKSRQRAAEAEEQRLLAEKXXXXXXXXXXXXXXXXXXGKGPRYTEKDLAGLRVAHGADAFDLGDSAILTLKDAEVLETDDHGVVRGLADGEDELENVAMTEAQRRADAEARAKRAAQGAYRAYDDEEFEAA-GPGGAPPQR-KILSQYDEE 987
            PAV   S+ NGEISM+I+ETN++R  +GL+PL + N+ +++ V NL + +E   EEA+ + L D    LAK++ +RQ  E+LKG +LGE     DG   SA DWV +SR + A A      +                         Y   DL GL VAH A AFD GD  ILTLKD  VL TDD   V    DG DELENV M +  RR + EAR KRA+   Y  +DD+EF    GP  A  +  ++L+QYDE+
Sbjct:   94 PAVISSSDKNGEISMTIDETNKLRISMGLKPLRLTNASKEKEV-NLSKSREDVAEEARQKALTDA---LAKSKQKRQFTEKLKGQSLGETLKQADGGRASALDWVRQSRTKKAAAPASSTPSAST----------------------YGAADLKGLTVAHDARAFDEGDEVILTLKDQRVL-TDDRNDVN---DGGDELENVDMRDEDRRLEREARLKRASGPVYSGFDDDEFTTILGPKKATKKPVRLLAQYDED 319          
BLAST of jgi.p|Trimin1|350743 vs. uniprot
Match: A0A485L1Q9_9STRA (Aste57867_14843 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L1Q9_9STRA)

HSP 1 Score: 137 bits (346), Expect = 6.760e-30
Identity = 218/726 (30.03%), Postives = 304/726 (41.87%), Query Frame = 1
Query:  250 VSESNGEISMSIEETNRVRAMLGLRPLAVGNSKEQQAVDNLRRKKEEEAKVRELADIEARLAKARNRRQLHERLKGSTLGEVQAGEDGSVLSAADWVGKSRQRAAEAEEQRLLAEKXXXXXXXXXXXXXXXXXXGKGPRYTEKDLAGLRVAHGADAFDLGDSAILTLKDAEVLETDDHGVVRGLADGEDELENVAMTEAQRRADAEARAKRAAQGAYRAYDDEEFEAAGPGGAPPQRKILSQYDEELERXXXXXXXXXXXGEAAAA-VKPTAAEAEARVAESLHTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFDAALXXXXXXXXXXLQDETPFMXXXXXXXXXXXXXXXXELDGDLAASLARARRLAQLKERAQARHESAAEVAERIAKAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEG----IVFTPATEFTSRMQAVLQERVREREAALRKEAERAARERGAGHVTVKHDAKREEAXXXXXXGGAWEEQAEAMDVEGEGEAGEGGSDAEGDDQAGFMLRQPLVRSSMAAALSLLQQSGDLKHKTEL--AGRAKDKRE--FAGEAPDDDGSGAGAVKLEYRDEFGRQLTRAEAFRQLNYQFHGYGPGKKKQEKRLKALQEQRMRERAAD--VSTISALRKVQEVTARPFLVVSG 2394
            V+E NGEISMSIEETN++R  +GL+PL +   K+++   +L + +EE                        E+LKG +LG++ A +  S L   DWV +SR +  +   +     K                      +Y   +L GL VAH A AFD G+  ILTLKD  +L  D + V     DG DELENV ++E  RRA+ EAR K+A+   Y  +DD+EF +   G AP ++++L+QYDEE E             +A    V   AA AE  V+ SL  A                         XXXXXXXXXXXXXXXXXX                                                 +A              D    M                ++D +L+ SLAR+RR+A L      R  + A V  ++A  K                             E EG    +VF  AT+F  R++  + ER     AA   +A+                      XXXXXX  +W                               + +PLV+S MAA L+LL+  GDL  K ++  +GRA D RE     E    DG     VKL+YRDEFGR LT+ EAFR+++Y+FHG+ PGKK+QEKRLK ++E+  +++        +  L K Q+   +  +V+SG
Sbjct:   70 VTEKNGEISMSIEETNKLRLSMGLKPLRLDKPKDKEV--DLTKSREEREDDAXXXXXXXXXXXXXXXXXFTEKLKGQSLGQILAQDASSTL---DWVRQSRTKKIDVLGKETEGPK----------------------KYGADELKGLTVAHDARAFDEGEDVILTLKDQRILTGDLNDVNE---DG-DELENVHISEMDRRAEREARMKKASGPVYSGFDDDEFTSVIGGKAPLKKRLLAQYDEEDEFVAAREKKKFSLSDAGTHHVDKAAAPAETVVSGSLSLATIKQRSIEEYYTVEEMAVFTKKQSKXXXXXXXXXXXXXXXXXXETKDGEPTDFLQQLEQDAAHDKSDHGKRRATTAATEVPPE---------EAERRAKFEHARKRANDRVQAMVEKMKNAAD-------DVDEELSESLARSRRMALLAATQDTREANDARVVLQLAGPKAANIHK-----------------------EEEGRGDTMVFNEATDFEVRVKNAMDERAARAVAA---QAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWG------------------------------VEEPLVQSGMAATLALLRNRGDLNDKIQVRQSGRANDHRERDIEDELQVKDG-----VKLDYRDEFGRLLTKKEAFRRISYRFHGHTPGKKRQEKRLKQIKEEIAQQKNLGNVAQRMQTLEKRQKAAKQAHVVLSG 687          
BLAST of jgi.p|Trimin1|350743 vs. uniprot
Match: A0A835YMH4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMH4_9STRA)

HSP 1 Score: 241 bits (614), Expect = 1.090e-78
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 3
Query:   75 MMRLASAIAVALAGAVIFALNELYWGRMPVLEFSTYMAVLLFSLLGLGAVLSEKGQLAVFPSEPEGPEPEVVQSDTADRVVLDLDADALGRLSPEDTSAPLTDEQLGEEISRERSHTLTERIIQGIHG 458
            MMRLASAIAVALAGAVIFALNELYWGRMPVLEFSTYMAVLLFSLLGLGAVLSEKGQLAVFPSEPEGPEPEVVQSDTADRVVLDLDADALGRLSPEDTSAPLTDEQLGEEISRERSHTLTERIIQGIHG
Sbjct:    1 MMRLASAIAVALAGAVIFALNELYWGRMPVLEFSTYMAVLLFSLLGLGAVLSEKGQLAVFPSEPEGPEPEVVQSDTADRVVLDLDADALGRLSPEDTSAPLTDEQLGEEISRERSHTLTERIIQGIHG 128          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350743 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C9M6_9STRA0.000e+0100.00SART-1 family-domain-containing protein n=1 Tax=Tr... [more]
D8LC27_ECTSI5.700e-9544.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3URM7_HETAK1.080e-4451.42Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A024TXF0_9STRA3.690e-4029.23Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A7S1XUI2_9STRA1.180e-3640.15Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A5D6XYL6_9STRA2.560e-3335.02Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8K1CWD9_PYTOL8.600e-3330.07Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A067C1I0_SAPPC3.380e-3231.08Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A3R7DL48_9STRA1.710e-3042.19Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A485L1Q9_9STRA6.760e-3030.03Aste57867_14843 protein n=1 Tax=Aphanomyces stella... [more]

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BLAST of jgi.p|Trimin1|350743 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YMH4_9STRA1.090e-78100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_70contigContig_70:603222..607011 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|350743|estExt_Genemark1.C_Ctg_700069
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03041,ko04121
KEGG ModuleM00354
KEGG Pathwayko03040,ko05131,map03040,map05131
KEGG koko:K01301,ko:K11984,ko:K12811,ko:K12836,ko:K12858
EC3.4.17.21,3.6.4.13
GOsGO:0000375,GO:0000377,GO:0000387,GO:0000398,GO:0000481,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005737,GO:0005794,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0012505,GO:0015030,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016604,GO:0016607,GO:0019222,GO:0022407,GO:0022409,GO:0022607,GO:0022613,GO:0022618,GO:0030155,GO:0030532,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045292,GO:0045580,GO:0045582,GO:0045583,GO:0045585,GO:0045595,GO:0045597,GO:0045619,GO:0045621,GO:0045785,GO:0046483,GO:0046540,GO:0048518,GO:0048522,GO:0050789,GO:0050793,GO:0050794,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0051094,GO:0051239,GO:0051240,GO:0051249,GO:0051251,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0071005,GO:0071011,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097525,GO:0097526,GO:0120114,GO:1901360,GO:1901363,GO:1902105,GO:1902107,GO:1902494,GO:1903037,GO:1903039,GO:1903706,GO:1903708,GO:1990904,GO:2000026
Preferred nameSART1
Descriptionmaturation of 5S rRNA
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG2217@1|root,KOG2217@2759|Eukaryota
Evalue6.91e-96
Seed ortholog2880.D8LC27
Hectar predicted targeting categoryother localisation
TranscriptId351065
TrackFilteredModels1
ProteinId350743
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350743gene_10911Tribonema minus UTEX_B_3156 geneContig_70 603222..607011 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_10911_1exon_10911_1Tribonema minus UTEX_B_3156 exonContig_70 603222..603269 +
exon_10911_2exon_10911_2Tribonema minus UTEX_B_3156 exonContig_70 603419..605362 +
exon_10911_3exon_10911_3Tribonema minus UTEX_B_3156 exonContig_70 606378..607011 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_10911CDS_10911Tribonema minus UTEX_B_3156 CDSContig_70 603222..603269 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_10911UTR3_10911Tribonema minus UTEX_B_3156 three_prime_UTRContig_70 606969..607011 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350743Trimin1|350743|estExt_Genemark1.C_Ctg_700069Tribonema minus UTEX_B_3156 polypeptideContig_70 603222..606968 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_10911 ID=mRNA_10911|Name=jgi.p|Trimin1|350743|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2626bp|location=Sequence derived from alignment at Contig_70:603222..607011+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAAAGATCCCGTAGCAGGGAGCGACGGAGGAAGCGAGCTCGCGGCACC
GAAGCAGCCGAAAACTGTCAGAATAGACTACGGAGACGAGGACGAAGACG
AGGAGGGCGAAATTCCACTGCAGCCCCCTCCGCCACCGCCTCTGCCGTCG
TCCCCGTCTCGCTCCGACATGCAGCTGCGTGGTGACATGGCACCACCGCC
ACCACCACCAGCTGGCGGCGATGTGGTATACGAGAAGATCAAGCCAGCCG
TCAGCGAGTCCAATGGCGAGATCAGCATGTCCATCGAGGAGACCAACAGG
GTGAGGGCCATGCTGGGCCTGAGGCCCCTGGCGGTAGGCAACTCCAAGGA
GCAGCAGGCAGTGGACAACCTGCGCAGGAAGAAGGAGGAGGAGGCCAAGG
TGCGCGAGCTCGCGGACATCGAGGCGCGCCTCGCCAAGGCGCGCAACCGC
CGCCAGCTGCACGAGCGCCTCAAGGGCAGCACGCTGGGCGAGGTGCAGGC
GGGCGAGGACGGCTCCGTGCTGAGCGCTGCGGACTGGGTCGGCAAGAGCC
GCCAGCGCGCAGCCGAGGCGGAGGAGCAGCGGCTGCTCGCAGAGAAGCGT
GCACGCCTCCTGGAGGAGCAGGAGCGCAGCGACGACGACAGCGACGGCGG
TGGAAAAGGCCCCAGGTACACGGAGAAGGACCTCGCGGGGCTGCGCGTCG
CGCACGGCGCCGACGCCTTTGACCTCGGCGACAGCGCGATACTCACGCTC
AAGGACGCGGAGGTGCTCGAGACGGACGACCACGGCGTCGTGCGCGGCCT
CGCCGACGGCGAGGACGAGCTCGAGAACGTCGCCATGACGGAGGCGCAGC
GCCGCGCGGACGCCGAGGCGCGCGCCAAGCGCGCCGCGCAGGGCGCGTAC
CGCGCGTACGACGACGAGGAGTTCGAGGCCGCCGGCCCCGGCGGCGCGCC
GCCGCAGCGCAAGATCCTCTCGCAGTACGACGAGGAGCTGGAGAGGAACC
GCAAGAAGAAGGCGGGGGGGATGGTGCTGGGCGAGGCAGCAGCGGCGGTG
AAGCCGACGGCGGCGGAGGCGGAGGCGCGCGTTGCAGAGTCGCTGCACAC
GGCGGCGGCGCGCGCGGCCGCTGCCGACTACTACACCGCGGAGGAGATGG
CCACCTTCAAGAAGCCCAAGAAGCTGCGGCGGAAGAAGGCGGCGCCGCGG
CGGCGCGCCGCGGACGAGGAGGAGGGCGACGAGCGCAGCGGCACCACGGC
GGTCGAGGCGGCGATGCTCGTCGACGGCAACGGCGCGAAAGCGAGCGCGG
ACCACGGCTCGCGTGCCGCACGCGCCGCCGCTGCCGCCGCCGCTGCCAAC
GGCGCCGCCGCGGAGAAGAAGGCGCGATTCGACGCCGCGCTCGCCAAGGC
ATCCGCGAAGGCGGCCGCCAAGCTGCAGGACGAGACGCCGTTCATGCCGC
CGCCGCCGCCGCCAGCAGCAGCAGCAGCGGAGCCCGAGGAGGAGGAGCTG
GACGGCGACCTGGCGGCGTCGCTGGCGCGCGCGCGGCGACTCGCGCAGCT
CAAGGAGCGCGCGCAGGCGCGGCACGAGTCCGCGGCGGAGGTCGCGGAGC
GCATCGCGAAAGCGAAGGCCGCCGCCGCCGCCGCCGTGGCGGTCAAGTCG
GAGGCGGGCGAGCAGAACGGCGGCGAGGCGGCGGCGGCAGCGGCGGCGGC
GGCGGAGGCGGAGGGCATCGTGTTCACGCCGGCGACGGAGTTCACGAGCC
GCATGCAGGCGGTGCTGCAGGAGCGCGTGCGCGAACGTGAGGCGGCGCTG
CGCAAGGAGGCGGAGCGCGCGGCGCGCGAGCGCGGCGCCGGCCACGTAAC
TGTCAAGCACGACGCGAAGCGCGAGGAGGCGGCGGCGGCGGCGGCTAGCG
GCGGCGCGTGGGAGGAGCAGGCGGAGGCGATGGACGTGGAGGGGGAGGGG
GAGGCGGGGGAGGGGGGGAGCGACGCGGAGGGGGATGATCAGGCGGGCTT
CATGCTGCGGCAGCCGCTCGTGCGCTCGAGCATGGCGGCGGCGCTCTCGC
TGCTGCAGCAGAGCGGCGACCTCAAGCACAAGACGGAGCTCGCGGGGCGC
GCCAAGGACAAGCGCGAGTTCGCCGGCGAGGCGCCCGACGACGACGGCAG
CGGCGCCGGCGCCGTCAAGCTCGAGTACCGCGACGAGTTTGGGCGCCAGC
TCACGCGCGCGGAGGCGTTCCGCCAGCTCAACTACCAGTTCCACGGCTAC
GGCCCCGGCAAGAAGAAGCAGGAGAAGCGCCTCAAGGCGCTGCAGGAGCA
GCGCATGCGCGAGCGCGCCGCGGACGTGTCCACGATCAGCGCGCTGCGCA
AGGTGCAGGAGGTGACGGCGCGCCCGTTCCTGGTCGTCAGCGGCGGCAGC
GGCGGCGGCGGCAGCGGCGCGGCGTCCGTGCTGCCGGAGCGGCTGGACCT
GAAGAAGGGCAGCAGCGGCGGCGGCGGCCGCGGCGGCGCCGCGAGTAGTA
AGCCGAAAGCGGGCGGGGGAGGCGCCTCGATGGTGCCGGGGCAGCAGTCC
GCGCAGCGGTCACGGCCGCCGCCGCCGACGTGATGTTCGTGGCAGCGACA
GCGTTCAATATAGTATACACGGCGTA
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protein sequence of jgi.p|Trimin1|350743

>Trimin1|350743|estExt_Genemark1.C_Ctg_700069 ID=Trimin1|350743|estExt_Genemark1.C_Ctg_700069|Name=jgi.p|Trimin1|350743|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=861bp
MKDPVAGSDGGSELAAPKQPKTVRIDYGDEDEDEEGEIPLQPPPPPPLPS
SPSRSDMQLRGDMAPPPPPPAGGDVVYEKIKPAVSESNGEISMSIEETNR
VRAMLGLRPLAVGNSKEQQAVDNLRRKKEEEAKVRELADIEARLAKARNR
RQLHERLKGSTLGEVQAGEDGSVLSAADWVGKSRQRAAEAEEQRLLAEKR
ARLLEEQERSDDDSDGGGKGPRYTEKDLAGLRVAHGADAFDLGDSAILTL
KDAEVLETDDHGVVRGLADGEDELENVAMTEAQRRADAEARAKRAAQGAY
RAYDDEEFEAAGPGGAPPQRKILSQYDEELERNRKKKAGGMVLGEAAAAV
KPTAAEAEARVAESLHTAAARAAAADYYTAEEMATFKKPKKLRRKKAAPR
RRAADEEEGDERSGTTAVEAAMLVDGNGAKASADHGSRAARAAAAAAAAN
GAAAEKKARFDAALAKASAKAAAKLQDETPFMPPPPPPAAAAAEPEEEEL
DGDLAASLARARRLAQLKERAQARHESAAEVAERIAKAKAAAAAAVAVKS
EAGEQNGGEAAAAAAAAAEAEGIVFTPATEFTSRMQAVLQERVREREAAL
RKEAERAARERGAGHVTVKHDAKREEAAAAAASGGAWEEQAEAMDVEGEG
EAGEGGSDAEGDDQAGFMLRQPLVRSSMAAALSLLQQSGDLKHKTELAGR
AKDKREFAGEAPDDDGSGAGAVKLEYRDEFGRQLTRAEAFRQLNYQFHGY
GPGKKKQEKRLKALQEQRMRERAADVSTISALRKVQEVTARPFLVVSGGS
GGGGSGAASVLPERLDLKKGSSGGGGRGGAASSKPKAGGGGASMVPGQQS
AQRSRPPPPT*
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mRNA from alignment at Contig_70:603222..607011+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_10911 ID=mRNA_10911|Name=jgi.p|Trimin1|350743|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3790bp|location=Sequence derived from alignment at Contig_70:603222..607011+ (Tribonema minus UTEX_B_3156 )
ATGAAAGATCCCGTAGCAGGGAGCGACGGAGGAAGCGAGCTCGCGGCAGT AGCCGCAGTCGCAGTCGAAGTCACAGTGCCGAACGGTCTAAGAGGGACAG GAGCGGCAGTAGGGAGCGGAGGCGCAAAACTTCAAGCCGCAGGCAAGAGG ACGACAGCGACAAGCAAATACCTCCTCCACCACCGCCGTTGCCTGAGCCG AAGCAGCCGAAAACTGTCAGAATAGACTACGGAGACGAGGACGAAGACGA GGAGGGCGAAATTCCACTGCAGCCCCCTCCGCCACCGCCTCTGCCGTCGT CCCCGTCTCGCTCCGACATGCAGCTGCGTGGTGACATGGCACCACCGCCA CCACCACCAGCTGGCGGCGATGTGGTATACGAGAAGATCAAGCCAGCCGT CAGCGAGTCCAATGGCGAGATCAGCATGTCCATCGAGGAGACCAACAGGG TGAGGGCCATGCTGGGCCTGAGGCCCCTGGCGGTAGGCAACTCCAAGGAG CAGCAGGCAGTGGACAACCTGCGCAGGAAGAAGGAGGAGGAGGCCAAGGT GCGCGAGCTCGCGGACATCGAGGCGCGCCTCGCCAAGGCGCGCAACCGCC GCCAGCTGCACGAGCGCCTCAAGGGCAGCACGCTGGGCGAGGTGCAGGCG GGCGAGGACGGCTCCGTGCTGAGCGCTGCGGACTGGGTCGGCAAGAGCCG CCAGCGCGCAGCCGAGGCGGAGGAGCAGCGGCTGCTCGCAGAGAAGCGTG CACGCCTCCTGGAGGAGCAGGAGCGCAGCGACGACGACAGCGACGGCGGT GGAAAAGGCCCCAGGTACACGGAGAAGGACCTCGCGGGGCTGCGCGTCGC GCACGGCGCCGACGCCTTTGACCTCGGCGACAGCGCGATACTCACGCTCA AGGACGCGGAGGTGCTCGAGACGGACGACCACGGCGTCGTGCGCGGCCTC GCCGACGGCGAGGACGAGCTCGAGAACGTCGCCATGACGGAGGCGCAGCG CCGCGCGGACGCCGAGGCGCGCGCCAAGCGCGCCGCGCAGGGCGCGTACC GCGCGTACGACGACGAGGAGTTCGAGGCCGCCGGCCCCGGCGGCGCGCCG CCGCAGCGCAAGATCCTCTCGCAGTACGACGAGGAGCTGGAGAGGAACCG CAAGAAGAAGGCGGGGGGGATGGTGCTGGGCGAGGCAGCAGCGGCGGTGA AGCCGACGGCGGCGGAGGCGGAGGCGCGCGTTGCAGAGTCGCTGCACACG GCGGCGGCGCGCGCGGCCGCTGCCGACTACTACACCGCGGAGGAGATGGC CACCTTCAAGAAGCCCAAGAAGCTGCGGCGGAAGAAGGCGGCGCCGCGGC GGCGCGCCGCGGACGAGGAGGAGGGCGACGAGCGCAGCGGCACCACGGCG GTCGAGGCGGCGATGCTCGTCGACGGCAACGGCGCGAAAGCGAGCGCGGA CCACGGCTCGCGTGCCGCACGCGCCGCCGCTGCCGCCGCCGCTGCCAACG GCGCCGCCGCGGAGAAGAAGGCGCGATTCGACGCCGCGCTCGCCAAGGCA TCCGCGAAGGCGGCCGCCAAGCTGCAGGACGAGACGCCGTTCATGCCGCC GCCGCCGCCGCCAGCAGCAGCAGCAGCGGAGCCCGAGGAGGAGGAGCTGG ACGGCGACCTGGCGGCGTCGCTGGCGCGCGCGCGGCGACTCGCGCAGCTC AAGGAGCGCGCGCAGGCGCGGCACGAGTCCGCGGCGGAGGTCGCGGAGCG CATCGCGAAAGCGAAGGCCGCCGCCGCCGCCGCCGTGGCGGTCAAGTCGG AGGCGGGCGAGCAGAACGGCGGCGAGGCGGCGGCGGCAGCGGCGGCGGCG GCGGAGGCGGAGGGCATCGTGTTCACGCCGGCGACGGAGTTCACGAGCCG CATGCAGGCGGTGCTGCAGGAGCGCGTGCGCGAACGTGAGGCGGCGCTGC GCAAGGAGGCGGAGCGCGCGGCGCGCGAGCGCGGCGCCGGCCACGTAACT GTCAAGCACGACGCGAAGCGCGAGGAGGCGGCGGCGGCGGCGGCTAGCGG CGGCGCGTGGGAGGAGCAGGCGGAGGCGATGGACGTGGAGGGGGAGGGGG AGGCGGGGGAGGGGGGGAGCGACGCGGAGGGGGATGATCAGGTACGTATG CTTGCAGTGTTGGGGAAGGGTAGGTATAGAAGCGCGACGCGAGGGGCGGC AGCGATGCGGAGGCGGACGCATCAGGTGTGCATGATTGGCAGTGTTGAGA AAGGGTATACTTGGTGGTTGATGGTATCACAGAAGGGGTCGGCGACAGAC ATGCGGAAGCGGATGCTCGGGCATGACGTTGCTGAGAAGGGTATGCATAG CGTAGCATCACTGTGGAGCGTGCACCGGCCGCGTGGGCGTGCGTGCAACT TCAACTTCATGTCACGTCTTGAGGGGAGATCCCTGCGTGCTGCCCCCGCG CGCAGTGATTCGCATGAGGGTGGTGCATGCAACCTGCTGCATAGGCAGGC TTTGATAGTGTTCATGCACACTTGCACGTGCGTGCAAGTTGACGTCTATC CAATGTGGCATTGGGGGTCGGTCGCGCTGGTGTTTGATGCGGCTTTGTAA ACTACACATGTTGCAGTCTGCAGTTCATCGCCTTAGCAACATCACATAAC TGAAACGGTGATTGTGTGTGCTGAAGAAGAATGAACTGGTTGCGCTCATT GTACATGTGATAGGCACCGTACTGATGGACCGTCAGGTGCCGATTCACTG TGCATGGCCAGCTAGTTATGGCAAAGTTAAAAAGTAGCGCCGCTGTGCGT TTCTATAGCGTCGTGCAGACATGTGTGTACCTCTTCTTACGACCCACAGT GTGCACACGAGCAGCAGATTGTGCAACTGGGTGTGATACATCGCTCATGG CACGGCGAGGCATGCAGCTTCAGGAAAGCAGCCGGCAGCGCACGCTGGTG GCTTGAGAAAGTGAACATGGTTGCCCCAATTCTGTCCGCGAGCGTATTGG CAGGGGCACACCCTCACATGCCCTTGCAACCACTGTTGACTTTCAGAGTA CCTCAGTTTGTCGCAGCCACATGATGTCATGCACATCCGCTGCCTGCTGG TCCAAACCCCCTCCCCCCCCCCCCCCACCCCCTCGCGCGCTCGCGCCGCT CCGCAGGCGGGCTTCATGCTGCGGCAGCCGCTCGTGCGCTCGAGCATGGC GGCGGCGCTCTCGCTGCTGCAGCAGAGCGGCGACCTCAAGCACAAGACGG AGCTCGCGGGGCGCGCCAAGGACAAGCGCGAGTTCGCCGGCGAGGCGCCC GACGACGACGGCAGCGGCGCCGGCGCCGTCAAGCTCGAGTACCGCGACGA GTTTGGGCGCCAGCTCACGCGCGCGGAGGCGTTCCGCCAGCTCAACTACC AGTTCCACGGCTACGGCCCCGGCAAGAAGAAGCAGGAGAAGCGCCTCAAG GCGCTGCAGGAGCAGCGCATGCGCGAGCGCGCCGCGGACGTGTCCACGAT CAGCGCGCTGCGCAAGGTGCAGGAGGTGACGGCGCGCCCGTTCCTGGTCG TCAGCGGCGGCAGCGGCGGCGGCGGCAGCGGCGCGGCGTCCGTGCTGCCG GAGCGGCTGGACCTGAAGAAGGGCAGCAGCGGCGGCGGCGGCCGCGGCGG CGCCGCGAGTAGTAAGCCGAAAGCGGGCGGGGGAGGCGCCTCGATGGTGC CGGGGCAGCAGTCCGCGCAGCGGTCACGGCCGCCGCCGCCGACGTGATGT TCGTGGCAGCGACAGCGTTCAATATAGTATACACGGCGTA
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Coding sequence (CDS) from alignment at Contig_70:603222..607011+

>mRNA_10911 ID=mRNA_10911|Name=jgi.p|Trimin1|350743|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2583bp|location=Sequence derived from alignment at Contig_70:603222..607011+ (Tribonema minus UTEX_B_3156 )
ATGAAAGATCCCGTAGCAGGGAGCGACGGAGGAAGCGAGCTCGCGGCACC
GAAGCAGCCGAAAACTGTCAGAATAGACTACGGAGACGAGGACGAAGACG
AGGAGGGCGAAATTCCACTGCAGCCCCCTCCGCCACCGCCTCTGCCGTCG
TCCCCGTCTCGCTCCGACATGCAGCTGCGTGGTGACATGGCACCACCGCC
ACCACCACCAGCTGGCGGCGATGTGGTATACGAGAAGATCAAGCCAGCCG
TCAGCGAGTCCAATGGCGAGATCAGCATGTCCATCGAGGAGACCAACAGG
GTGAGGGCCATGCTGGGCCTGAGGCCCCTGGCGGTAGGCAACTCCAAGGA
GCAGCAGGCAGTGGACAACCTGCGCAGGAAGAAGGAGGAGGAGGCCAAGG
TGCGCGAGCTCGCGGACATCGAGGCGCGCCTCGCCAAGGCGCGCAACCGC
CGCCAGCTGCACGAGCGCCTCAAGGGCAGCACGCTGGGCGAGGTGCAGGC
GGGCGAGGACGGCTCCGTGCTGAGCGCTGCGGACTGGGTCGGCAAGAGCC
GCCAGCGCGCAGCCGAGGCGGAGGAGCAGCGGCTGCTCGCAGAGAAGCGT
GCACGCCTCCTGGAGGAGCAGGAGCGCAGCGACGACGACAGCGACGGCGG
TGGAAAAGGCCCCAGGTACACGGAGAAGGACCTCGCGGGGCTGCGCGTCG
CGCACGGCGCCGACGCCTTTGACCTCGGCGACAGCGCGATACTCACGCTC
AAGGACGCGGAGGTGCTCGAGACGGACGACCACGGCGTCGTGCGCGGCCT
CGCCGACGGCGAGGACGAGCTCGAGAACGTCGCCATGACGGAGGCGCAGC
GCCGCGCGGACGCCGAGGCGCGCGCCAAGCGCGCCGCGCAGGGCGCGTAC
CGCGCGTACGACGACGAGGAGTTCGAGGCCGCCGGCCCCGGCGGCGCGCC
GCCGCAGCGCAAGATCCTCTCGCAGTACGACGAGGAGCTGGAGAGGAACC
GCAAGAAGAAGGCGGGGGGGATGGTGCTGGGCGAGGCAGCAGCGGCGGTG
AAGCCGACGGCGGCGGAGGCGGAGGCGCGCGTTGCAGAGTCGCTGCACAC
GGCGGCGGCGCGCGCGGCCGCTGCCGACTACTACACCGCGGAGGAGATGG
CCACCTTCAAGAAGCCCAAGAAGCTGCGGCGGAAGAAGGCGGCGCCGCGG
CGGCGCGCCGCGGACGAGGAGGAGGGCGACGAGCGCAGCGGCACCACGGC
GGTCGAGGCGGCGATGCTCGTCGACGGCAACGGCGCGAAAGCGAGCGCGG
ACCACGGCTCGCGTGCCGCACGCGCCGCCGCTGCCGCCGCCGCTGCCAAC
GGCGCCGCCGCGGAGAAGAAGGCGCGATTCGACGCCGCGCTCGCCAAGGC
ATCCGCGAAGGCGGCCGCCAAGCTGCAGGACGAGACGCCGTTCATGCCGC
CGCCGCCGCCGCCAGCAGCAGCAGCAGCGGAGCCCGAGGAGGAGGAGCTG
GACGGCGACCTGGCGGCGTCGCTGGCGCGCGCGCGGCGACTCGCGCAGCT
CAAGGAGCGCGCGCAGGCGCGGCACGAGTCCGCGGCGGAGGTCGCGGAGC
GCATCGCGAAAGCGAAGGCCGCCGCCGCCGCCGCCGTGGCGGTCAAGTCG
GAGGCGGGCGAGCAGAACGGCGGCGAGGCGGCGGCGGCAGCGGCGGCGGC
GGCGGAGGCGGAGGGCATCGTGTTCACGCCGGCGACGGAGTTCACGAGCC
GCATGCAGGCGGTGCTGCAGGAGCGCGTGCGCGAACGTGAGGCGGCGCTG
CGCAAGGAGGCGGAGCGCGCGGCGCGCGAGCGCGGCGCCGGCCACGTAAC
TGTCAAGCACGACGCGAAGCGCGAGGAGGCGGCGGCGGCGGCGGCTAGCG
GCGGCGCGTGGGAGGAGCAGGCGGAGGCGATGGACGTGGAGGGGGAGGGG
GAGGCGGGGGAGGGGGGGAGCGACGCGGAGGGGGATGATCAGGCGGGCTT
CATGCTGCGGCAGCCGCTCGTGCGCTCGAGCATGGCGGCGGCGCTCTCGC
TGCTGCAGCAGAGCGGCGACCTCAAGCACAAGACGGAGCTCGCGGGGCGC
GCCAAGGACAAGCGCGAGTTCGCCGGCGAGGCGCCCGACGACGACGGCAG
CGGCGCCGGCGCCGTCAAGCTCGAGTACCGCGACGAGTTTGGGCGCCAGC
TCACGCGCGCGGAGGCGTTCCGCCAGCTCAACTACCAGTTCCACGGCTAC
GGCCCCGGCAAGAAGAAGCAGGAGAAGCGCCTCAAGGCGCTGCAGGAGCA
GCGCATGCGCGAGCGCGCCGCGGACGTGTCCACGATCAGCGCGCTGCGCA
AGGTGCAGGAGGTGACGGCGCGCCCGTTCCTGGTCGTCAGCGGCGGCAGC
GGCGGCGGCGGCAGCGGCGCGGCGTCCGTGCTGCCGGAGCGGCTGGACCT
GAAGAAGGGCAGCAGCGGCGGCGGCGGCCGCGGCGGCGCCGCGAGTAGTA
AGCCGAAAGCGGGCGGGGGAGGCGCCTCGATGGTGCCGGGGCAGCAGTCC
GCGCAGCGGTCACGGCCGCCGCCGCCGACGTGA
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