mRNA_10820 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|351868
Unique NamemRNA_10820
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|351868 vs. uniprot
Match: A0A835ZF56_9STRA (Acyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF56_9STRA)

HSP 1 Score: 659 bits (1701), Expect = 7.050e-239
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 1
Query:    1 MLLITCWVVYLVSPKLKRKLNSQYAQLLFVRGISYVLPPVEMVVTGDEFCDGSQAIVIANHQVDADWWYPWCLLRAYGQDAYAKFILKADLGRMPLVGWGLKGLDFIMLRRDWQVDQKHLMQQLQVFVHDDTPLRLVIFPEGTTMNTTSLEKSTAFAQKQGRPELKRLLLPRTTGFAACLDCLKDVPSGTVYDLTIAYEGYSGEVPTWEMGYERARDVTLPSMAKLMAAQRCGRAHIHVAAHEMSAVAAAGGAEAWLDAAWARKDALLETFIKERRFPGEARVVRVSQDARVFFTAALALPAAFVWAAVKVGGACAHALAVAQFGKRDA 987
            MLLITCWVVYLVSPKLKRKLNSQYAQLLFVRGISYVLPPVEMVVTGDEFCDGSQAIVIANHQVDADWWYPWCLLRAYGQDAYAKFILKADLGRMPLVGWGLKGLDFIMLRRDWQVDQKHLMQQLQVFVHDDTPLRLVIFPEGTTMNTTSLEKSTAFAQKQGRPELKRLLLPRTTGFAACLDCLKDVPSGTVYDLTIAYEGYSGEVPTWEMGYERARDVTLPSMAKLMAAQRCGRAHIHVAAHEMSAVAAAGGAEAWLDAAWARKDALLETFIKERRFPGEARVVRVSQDARVFFTAALALPAAFVWAAVKVGGACAHALAVAQFGKRDA
Sbjct:    1 MLLITCWVVYLVSPKLKRKLNSQYAQLLFVRGISYVLPPVEMVVTGDEFCDGSQAIVIANHQVDADWWYPWCLLRAYGQDAYAKFILKADLGRMPLVGWGLKGLDFIMLRRDWQVDQKHLMQQLQVFVHDDTPLRLVIFPEGTTMNTTSLEKSTAFAQKQGRPELKRLLLPRTTGFAACLDCLKDVPSGTVYDLTIAYEGYSGEVPTWEMGYERARDVTLPSMAKLMAAQRCGRAHIHVAAHEMSAVAAAGGAEAWLDAAWARKDALLETFIKERRFPGEARVVRVSQDARVFFTAALALPAAFVWAAVKVGGACAHALAVAQFGKRDA 329          
BLAST of jgi.p|Trimin1|351868 vs. uniprot
Match: A0A6H5KRR0_9PHAE (PlsC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRR0_9PHAE)

HSP 1 Score: 261 bits (668), Expect = 1.580e-80
Identity = 140/323 (43.34%), Postives = 193/323 (59.75%), Query Frame = 1
Query:   37 SPKLKRKLNSQYAQLLFVRGISYVLPPVEMVVTGDEFCDGSQAIVIANHQVDADWWYPWCLLRAYGQDAYAKFILKADLGRMPLVGWGLKGLDFIMLRRDWQVDQKHLMQQLQVFVHDDTPLRLVIFPEGTTMNTTSLEKSTAFAQKQGRPELKRLLLPRTTGFAACLDCLK--DVPSG--------------------------------TVYDLTIAYEGYSGEVPTWEMGYERARDVTLPSMAKLMAAQRCGRAHIHVAAHEMSAVAAAGGAEAWLDAAWARKDALLETFIKERRFPGEARVVRVSQDARVFFTAALALP 903
            S    R+LNS +A+ ++   +S ++PP ++VVTG+   D +QAIVIANHQVD DWW+ + L+R   +    K ILK D   +P+ GWG++G  F+ L+RDW  D+ +L +QL VF  D  PLRL+IFPEGTT+N  S+EK TAFA+K+ RP  + LLLPRTTGF ACL+  +  + P G                                 VYD+T+ Y GYSGE+P+WEMGY R RDV +P++  L+  +  G  H+HV  H +  +A  G  +AWLDA WARKDALL  FI++ RFP +   V  S+ + + F    A P
Sbjct:   69 SASTVRRLNSNFAEAMWADAMSAIMPPSKVVVTGEMPDDDTQAIVIANHQVDCDWWFLFELMRPLRRHGALKIILKDDQKHIPVTGWGMRGFGFVFLKRDWVKDRANLERQLGVFTGDGFPLRLLIFPEGTTINARSMEKCTAFAKKEQRPRFEHLLLPRTTGFGACLNAFRRTESPGGRGGXXXXXXXXXXXXXXXXXXXXAGAAGHSGRVVYDITMGYTGYSGEIPSWEMGYTRDRDVDVPNLGALLKGRAPGPVHLHVEKHWVDDIA--GDGKAWLDATWARKDALLRRFIEDGRFPHQPVAVFESRKSPMAFLLLSATP 389          
BLAST of jgi.p|Trimin1|351868 vs. uniprot
Match: A0A1Q2U6T9_9STRA (Lysophosphatidate acyltransferase 4 n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1Q2U6T9_9STRA)

HSP 1 Score: 247 bits (630), Expect = 8.130e-73
Identity = 127/270 (47.04%), Postives = 178/270 (65.93%), Query Frame = 1
Query:   52 RKLNSQYAQLLFVRGISYVLPPVEMVVTGD---EFCDGSQ-AIVIANHQVDADWWYPWCLLRAYGQDAYAKFILKADLGRMPLVGWGLKGLDFIMLRRDWQVDQKHLMQQLQVFVHDDTPLRLVIFPEGTTMNTTSLEKSTAFAQKQGRPELKRLLLPRTTGFAACLDCLKDVPSG---TVYDLTIAYEGYSGEVPTWEMGYERARDVTLPSMAKLMAAQRCGRAHIHVAAHEMSAVAAAGGAEAWLDAAWARKDALLETFIKERRFPGE 840
            R+L   + Q ++V  +SY+LP  EM++TGD      D S+ AI+IANHQVDAD+WY W + RAYG     K ILKADL  +P+VGWG+K  +F  L+R+WQ D++   + L  FV D     L++FPEGTT+NT ++ KS  F ++Q RP L   +LPR+TGFAA ++ +   P G    +YDLT+AY GYSGEVPT+EMGY+R +D+ +P++ K++  + C + H+HV  +E+   A     E WLDA W  KDALLE FI+ + F GE
Sbjct:  140 RRLIGHWWQRMWVSVMSYLLPKSEMILTGDIVLNTVDSSRPAIIIANHQVDADFWYVWEVARAYGMHGRLKIILKADLAVVPIVGWGMKQFEFCFLQRNWQRDRRAFTRLLSSFVEDGYKCALLLFPEGTTINTEAVTKSHRFGREQKRPHLDHCILPRSTGFAALVETMCQSPHGHSPVIYDLTVAYHGYSGEVPTYEMGYDREQDMDVPNVFKMIQGRACPKVHVHVKTYEVDE-ALVNNPEQWLDARWLEKDALLERFIQTQSFRGE 408          
BLAST of jgi.p|Trimin1|351868 vs. uniprot
Match: A0A7S3Y9A3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y9A3_HETAK)

HSP 1 Score: 232 bits (592), Expect = 1.230e-70
Identity = 122/269 (45.35%), Postives = 163/269 (60.59%), Query Frame = 1
Query:   25 VYLVSPKLKRKLNSQYAQLLFVRGISYVLPPVEMVVTGDEFCDGSQAIVIANHQVDADWWYPWCLLRAYGQDAYAKFILKADLGRMPLVGWGLKGLDFIMLRRDWQVDQKHLMQQLQVFVHDDTPLRLVIFPEGTTMNTTSLEKSTAFAQKQGRPELKRLLLPRTTGFAACLDCLKDVPSG-TVYDLTIAYEGYSGEVPTWEMGYERARDVTLPSMAKLMAAQRCGRAHIHVAAHEMSAVAAAGGAEAWLDAAWARKDALLETFIKERR 828
            V L S K  R++ S Y Q  +V  I+ + PP + VV+GD     +  I+IANHQ DAD+WY W   RA G+    K ILK D+G +P++GWG++  +FI+L R+W  DQ  + ++L  F     PL L+IFPEGTT NT + +K  AFA + GRP L+RLLLPRTTGF+ CL  L D   G  +YD+TIAY  YSGEVPTW MGY R  D+ +PS+A+LM        HIH+   + SA +     + W+D  W RK+  L  F    R
Sbjct:   39 VGLWSSKKSREIISNYGQRYWVEVIASIFPPTKFVVSGDVPDGKAPGIIIANHQTDADFWYVWECCRALGRAGDVKIILKEDVGDIPVIGWGIRLFEFILLARNWASDQDRMRRRLAAFGRARFPLLLLIFPEGTTANTETRDKCHAFAARTGRPRLERLLLPRTTGFSCCLQNLPDNAEGYNIYDMTIAYSSYSGEVPTWSMGYTRKHDLDIPSVARLMHYDPGKEVHIHIT--KTSAPSIVANVDKWMDETWVRKERRLGNFAARGR 305          
BLAST of jgi.p|Trimin1|351868 vs. uniprot
Match: W7THY1_9STRA (Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase 5 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THY1_9STRA)

HSP 1 Score: 236 bits (602), Expect = 2.900e-69
Identity = 128/282 (45.39%), Postives = 180/282 (63.83%), Query Frame = 1
Query:   19 WVVYLV----SPKLKRKLNSQYAQLLFVRGISYVLPPVEMVVTGDEF---CDGSQ-AIVIANHQVDADWWYPWCLLRAYGQDAYAKFILKADLGRMPLVGWGLKGLDFIMLRRDWQVDQKHLMQQLQVFVHDDTPLRLVIFPEGTTMNTTSLEKSTAFAQKQGRPELKRLLLPRTTGFAACLDCL---KDVPSGTVYDLTIAYEGYSGEVPTWEMGYERARDVTLPSMAKLMAAQRCGRAHIHVAAHEMSAVAAAGGAEAWLDAAWARKDALLETFIKERRF 831
            ++VYL     S +  R+L   + Q ++V  +SY++PP E+V++GD F    D ++ AI+IANHQVDAD+WY W + RA+      K ILKA+L ++P+VGWG++  +F  LRR+W+ D++ L + L  F+ D     L++FPEGTT+NT SL KS  FAQ+Q RP LK LLLPR+TGFAACL+ +      P   +YDLT+AY GYSGEVP+W MGY R RDV +PS+A+++      R  +HV  ++          + WLDA W  KD  L  FIK + F
Sbjct:  124 FLVYLTVRPWSRRTARRLIGNWFQSMWVSVMSYLMPPSELVLSGDVFPKTMDSTRPAIIIANHQVDADFWYCWEVARAHQLQGQLKIILKAELSQVPVVGWGMRQFEFCFLRRNWEQDRRGLTRLLSSFMEDGLNCALLLFPEGTTINTESLAKSHRFAQQQSRPRLKHLLLPRSTGFAACLETMCQSSTAPPPLIYDLTVAYGGYSGEVPSWAMGYGRDRDVGVPSVAEMVQGLIQPRVFVHVKTYQADH-RLREDPQKWLDARWGEKDVRLGEFIKHQAF 404          
BLAST of jgi.p|Trimin1|351868 vs. uniprot
Match: A0A4D9D5I2_9STRA (PlsC domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5I2_9STRA)

HSP 1 Score: 228 bits (581), Expect = 1.050e-67
Identity = 121/257 (47.08%), Postives = 167/257 (64.98%), Query Frame = 1
Query:   82 LFVRGISYVLPPVEMVVTGDEF---CDGSQ-AIVIANHQVDADWWYPWCLLRAYGQDAYAKFILKADLGRMPLVGWGLKGLDFIMLRRDWQVDQKHLMQQLQVFVHDDTPLRLVIFPEGTTMNTTSLEKSTAFAQKQGRPELKRLLLPRTTGFAACLDCL---KDVPSGTVYDLTIAYEGYSGEVPTWEMGYERARDVTLPSMAKLMAAQRCGRAHIHVAAHEMSAVAAAGGAEAWLDAAWARKDALLETFIKERRF 831
            ++V  +SY++PP E+V++GD F    D ++ AI+IANHQVDAD+WY W + RA+      K ILKA+L ++P+VGWG++  +F  LRR+W  D++ L + L  F+ D     L++FPEGTT+NT SL KS  FAQ+Q RP LK LLLPR+TGFAACL+ +      P   +YDLT+AY GYSGEVP+W MGY R RDV +PS+A+++      R  +HV  ++          + WLDA W  KD  L  FIK + F
Sbjct:    1 MWVSVMSYLMPPSELVLSGDVFPKTMDSTRPAIIIANHQVDADFWYCWEVARAHQLQGQLKIILKAELSQVPVVGWGMRQFEFCFLRRNWDQDRRGLTRLLCSFMEDGLNCALLLFPEGTTINTESLAKSHRFAQQQSRPHLKHLLLPRSTGFAACLETMCQSSTAPPPLIYDLTVAYGGYSGEVPSWAMGYGRDRDVGVPSVAEMVQGLIQPRVFVHVKTYQADH-RLREDPQKWLDARWGEKDVRLGEFIKHQAF 256          
BLAST of jgi.p|Trimin1|351868 vs. uniprot
Match: K3X6I6_GLOUD (PlsC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6I6_GLOUD)

HSP 1 Score: 213 bits (541), Expect = 3.260e-62
Identity = 125/286 (43.71%), Postives = 167/286 (58.39%), Query Frame = 1
Query:   13 TCWVVYLVSP---KLKRKLNSQYAQLLFVRGISYVLPPVEMVVTGDEFCDGSQ-AIVIANHQVDADWWYPWCLLRAYGQDAYAKFILKADLGRMPLVGWGLKGLDFIMLRRDWQVDQKHLMQQLQVFVHDDTPLRLVIFPEGTTMNTTSLEKSTAFAQKQGRPELKRLLLPRTTGFAACLDCLKDVPSGTVYDLTIAYEGYSGEVPTWEMGYERARDVTLPSMAKLMAAQRCGRAHIHVAAHEMSAVAAAGGAEAWLDAAWARKDALLETFIKERRFP--GEARVV 852
            T W+  LV P    L R+L   Y Q L+V   S   P  ++VVTG+   D ++ AI+IANHQVDADWWY W   RAY      K +LK  L  +P++GWG++  +F+ LRR    D KH+   +   + DD P  LVIFPEGTT++   + KS AFA+K  RP+  R+LLPRT+G    LD + DV    +YD+TIA+  YSGEVPT++MGY R RD+ +PSM  L+A Q    A IH   +    V      E +LD  W  K+  L  FIK ++FP   EA+ V
Sbjct:   27 TIWL--LVRPFDNALYRRLMGSYVQSLWVDVASSCFPEAKLVVTGEIPTDKTRPAIIIANHQVDADWWYIWQAARAYKGAGNIKIVLKDQLKYVPIIGWGMRLFEFLFLRRSIDHDSKHIKAYMDSLIGDDYPFWLVIFPEGTTIHKEYVVKSQAFAEKLNRPKFNRVLLPRTSGLQIILDAVDDVKPD-IYDMTIAFPTYSGEVPTFDMGYGRERDIDVPSMKSLLAGQGPKHAAIHSKKYSYEEVTQ--NLEQFLDTRWKEKEERLNYFIKHQQFPVNNEAQTV 307          
BLAST of jgi.p|Trimin1|351868 vs. uniprot
Match: A0A8K1CJG2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJG2_PYTOL)

HSP 1 Score: 209 bits (533), Expect = 5.040e-61
Identity = 113/261 (43.30%), Postives = 160/261 (61.30%), Query Frame = 1
Query:   76 QLLFVRGISYVLPPVEMVVTGDEFCDGSQ-AIVIANHQVDADWWYPWCLLRAYGQDAYAKFILKADLGRMPLVGWGLKGLDFIMLRRDWQVDQKHLMQQLQVFVHDDTPLRLVIFPEGTTMNTTSLEKSTAFAQKQGRPELKRLLLPRTTGFAACLDCLKDVPSGTVYDLTIAYEGYSGEVPTWEMGYERARDVTLPSMAKLMAAQRCGRAHIHVAAHEMSAVAAAGGAEAWLDAAWARKDALLETFIKERRFP---GEAR 846
            Q L+V   S   P   + +TGD   D S+ AI+IANHQVDADWWY W   R +      K +LK  L R+P++GWG++  +F+ LRR    D KH+ + +   +HD+ P  LVIFPEGTT++T  + K+ AFA+K  RP+ + ++LPRT+G    LD + DV    +YDLTIA+  YSGEVPT++MGY+R  D  +PSM  L+A ++ GR  +H    + +   A G  E +LDA W  KDA +  +I+ + FP   GE R
Sbjct:   48 QALWVDVASSCFPTTLLDITGDLPTDNSRPAIIIANHQVDADWWYIWQAARHHKGAGNIKIVLKDQLKRVPIIGWGMRLFEFLFLRRSIDHDAKHIKEYMDSLIHDEFPFWLVIFPEGTTIHTEYVVKANAFAEKTNRPKFEHVVLPRTSGLQIILDAVADVKPD-IYDLTIAFPSYSGEVPTFDMGYDRKIDTDVPSMKSLLAGKKPGRVAMH--GKKFAYDDAVGNLEKFLDARWTEKDARMAHYIEHKEFPAADGETR 305          
BLAST of jgi.p|Trimin1|351868 vs. uniprot
Match: A0A0L0G5H1_9EUKA (PlsC domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G5H1_9EUKA)

HSP 1 Score: 205 bits (522), Expect = 3.460e-59
Identity = 118/267 (44.19%), Postives = 159/267 (59.55%), Query Frame = 1
Query:   64 SQYAQLLFVRGISYVLPPVEMVVTGDE-------FCDGSQAIVIANHQVDADWWYPWCLLRAYGQDAYAKFILKADLGRMPLVGWGLKGLDFIMLRRDWQVDQKHLMQQLQVFVHDDTPLRLVIFPEGTTMNTTSLEKSTAFAQKQGRPEL-KRLLLPRTTGFAACLDCLKDVPSGTVYDLTIAYEGYSGEVPTWEMGYERARDVTLPSMAKLMAAQRCGRAHIHVAAHEMSAVAAAGGAEAWLDAAWARKDALLETFIKERRFPGE 840
            S   Q +++ G+SY LP   +V++GD          D   AI+I+NH VD DW+  W L RA G     K ILK  L  +P+ GWG++  +FI L RDW  D+ +L + L+ FVHDD PL L++FPEGTT+   SLEKS+ FA+K GR    K LL PRT GF ACLD +K V + TVYD+T+AY+ YSGE+ T +MGY R  DV +P+M KL++ +RC   H H+       +      E +LD  WA K   +E F K  +F  E
Sbjct:   59 SNILQAMWIDGVSYGLPAPVLVISGDMPPMKQNLDDDVHSAIIISNHTVDYDWYCLWLLGRARGYHGVMKIILKDSLKHLPVFGWGMQYFEFIFLARDWSKDKHNLYKLLRSFVHDDMPLWLLLFPEGTTICKESLEKSSNFAKKSGRRVFDKHLLSPRTRGFDACLDAMK-VGTPTVYDITMAYDSYSGEIVTNDMGYNRNIDVNIPTMLKLLSGERCPFVHFHIQQILYEDIDL-HNTEKFLDDLWAAKYDRMERFTKLNKFAEE 323          
BLAST of jgi.p|Trimin1|351868 vs. uniprot
Match: W4GZW6_9STRA (PlsC domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GZW6_9STRA)

HSP 1 Score: 202 bits (514), Expect = 1.820e-58
Identity = 119/284 (41.90%), Postives = 167/284 (58.80%), Query Frame = 1
Query:   13 TCWVVYLVSPKLKRKLNSQYAQLLFVRGISYVLPPVEMVVTGDEFCDGSQA-IVIANHQVDADWWYPWCLLRAYGQDAYAKFILKADLGRMPLVGWGLKGLDFIMLRRDWQVDQKHLMQQLQVFVHDDTPLRLVIFPEGTTMNTTSLEKSTAFAQKQGRPELKRLLLPRTTGFAACLDCLKDVP-SGTVYDLTIAYEGYSGEVPTWEMGYERARDVTLPSMAKLMAAQRCGRAHIHVAAHEMSAVAAAGGAEAWLDAAWARKDALLETFIKERRFPGEARVVRV 858
            TC +        +R +   +A  +++  I+    P ++VV+G+   D S+  I++ANHQVDADWWY   LLRA+G     K  +K  L  +P++G G+  LDF+ LRRD +VD+  +   +Q FV D+ P  LV+FPEGTT+ T S+ KS  FA  Q RP L R++LPR+TG    LD  KD P   T+ D+T+A+  YSGEVPT+EMGY+R  DV LPSM KL+      + H H     M+ V      +A+LDA W  K+ALL  FI+ + F  +    RV
Sbjct:   31 TCTLRPFSRAHFRRAIGRCFA--MYMEIIACCFHPCDLVVSGNVPTDTSKPMIILANHQVDADWWYICELLRAHGGAGNVKIAMKHTLRSLPVLGTGMSMLDFLFLRRDIKVDRVTIQAYMQSFVQDNFPFWLVLFPEGTTIFTESVLKSHEFATAQHRPVLHRVMLPRSTGLKLMLDAFKDSPVQPTILDVTMAFPSYSGEVPTYEMGYDRHVDVDLPSMKKLLMGHGPSKVHFHCRHFSMADVG--DDVQAFLDALWVDKEALLNEFIQHQGFESKQHSTRV 310          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351868 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZF56_9STRA7.050e-239100.00Acyltransferase-domain-containing protein n=1 Tax=... [more]
A0A6H5KRR0_9PHAE1.580e-8043.34PlsC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A1Q2U6T9_9STRA8.130e-7347.04Lysophosphatidate acyltransferase 4 n=1 Tax=Nannoc... [more]
A0A7S3Y9A3_HETAK1.230e-7045.35Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W7THY1_9STRA2.900e-6945.39Putative 1-acyl-sn-glycerol-3-phosphate acyltransf... [more]
A0A4D9D5I2_9STRA1.050e-6747.08PlsC domain-containing protein n=1 Tax=Nannochloro... [more]
K3X6I6_GLOUD3.260e-6243.71PlsC domain-containing protein n=1 Tax=Globisporan... [more]
A0A8K1CJG2_PYTOL5.040e-6143.30Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0L0G5H1_9EUKA3.460e-5944.19PlsC domain-containing protein n=1 Tax=Sphaeroform... [more]
W4GZW6_9STRA1.820e-5841.90PlsC domain-containing protein (Fragment) n=1 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_101contigContig_101:396190..400240 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|351868|estExt_Genemark1.C_Ctg_1010050
BRITEko00000,ko00001,ko01000,ko01004,ko03021
KEGG rclassRC00004,RC00037
KEGG ReactionR09036
KEGG Pathwayko00564,map00564
KEGG koko:K13514,ko:K15176
GOsGO:0003674,GO:0003824,GO:0003841,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005789,GO:0005811,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0009058,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010565,GO:0012505,GO:0016020,GO:0016021,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0019216,GO:0019217,GO:0019222,GO:0019637,GO:0031224,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031984,GO:0036148,GO:0036149,GO:0042171,GO:0042175,GO:0042304,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045723,GO:0045834,GO:0045923,GO:0046471,GO:0046486,GO:0046488,GO:0046889,GO:0046890,GO:0047144,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0062012,GO:0062013,GO:0065007,GO:0071617,GO:0071704,GO:0080090,GO:0090407,GO:0098827,GO:1901576
Preferred nameLPGAT1
Description1-acylglycerol-3-phosphate O-acyltransferase activity
COG categoryI
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0204@1|root,KOG1505@2759|Eukaryota
Evalue1.63e-80
Seed ortholog2880.D7G4B3
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionacyltransferase
Ec32 orthologEc-02_002040.1
TranscriptId352190
TrackFilteredModels1
ProteinId351868
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351868gene_10820Tribonema minus UTEX_B_3156 geneContig_101 396190..400240 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351868Trimin1|351868|estExt_Genemark1.C_Ctg_1010050Tribonema minus UTEX_B_3156 polypeptideContig_101 396272..400240 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_10820_4exon_10820_4Tribonema minus UTEX_B_3156 exonContig_101 396190..396784 -
exon_10820_3exon_10820_3Tribonema minus UTEX_B_3156 exonContig_101 397482..397652 -
exon_10820_2exon_10820_2Tribonema minus UTEX_B_3156 exonContig_101 399532..399777 -
exon_10820_1exon_10820_1Tribonema minus UTEX_B_3156 exonContig_101 400181..400240 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_10820UTR3_10820Tribonema minus UTEX_B_3156 three_prime_UTRContig_101 396190..396271 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_10820CDS_10820Tribonema minus UTEX_B_3156 CDSContig_101 400181..400240 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_10820 ID=mRNA_10820|Name=jgi.p|Trimin1|351868|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1072bp|location=Sequence derived from alignment at Contig_101:396190..400240- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGCTCATCACCTGCTGGGTGGTATACCTCGTTTCTCCCAAGCTCAA
GCGGAAACTGAACTCCCAATACGCGCAGCTGCTGTTCGTACGCGGCATAT
CGTACGTGCTACCCCCCGTAGAAATGGTCGTCACCGGCGACGAATTTTGC
GATGGCTCCCAGGCAATCGTCATTGCCAACCACCAGGTAGACGCGGACTG
GTGGTACCCCTGGTGTCTGCTGCGCGCCTACGGTCAGGACGCGTACGCCA
AGTTTATTCTGAAGGCGGACTTGGGAAGGATGCCGCTTGTGGGGTGGGGA
CTCAAGGGTTTGGACTTCATCATGCTGCGGCGCGACTGGCAGGTGGACCA
GAAGCACCTGATGCAGCAGCTGCAGGTGTTTGTGCATGATGATACCCCGC
TGCGCCTGGTCATCTTTCCAGAGGGCACCACCATGAATACCACCAGCCTA
GAGAAGTCCACTGCGTTTGCACAGAAGCAAGGGCGGCCCGAGCTCAAGCG
CCTCCTGCTGCCGCGCACCACGGGTTTCGCGGCGTGCCTCGACTGCCTCA
AGGACGTCCCCAGCGGCACCGTTTACGACCTGACCATCGCGTACGAGGGG
TACAGCGGCGAGGTCCCCACGTGGGAGATGGGCTACGAGAGAGCGCGAGA
CGTGACACTCCCCAGCATGGCCAAGCTGATGGCGGCGCAGCGCTGCGGCC
GCGCGCACATTCATGTCGCCGCGCACGAGATGAGTGCTGTTGCGGCGGCG
GGCGGCGCGGAGGCGTGGCTCGACGCCGCCTGGGCGCGCAAGGACGCGCT
CCTCGAGACCTTCATTAAAGAGCGGCGTTTCCCTGGGGAGGCGCGCGTCG
TGCGCGTGTCGCAGGATGCGCGAGTGTTCTTCACGGCGGCGCTGGCGCTG
CCGGCGGCGTTCGTGTGGGCAGCGGTGAAGGTCGGGGGGGCGTGCGCGCA
CGCGCTGGCGGTCGCGCAGTTCGGCAAGCGCGATGCGTAGAGCGTGTACC
GTTCTCCGCCGTTGCGCAGTTGGACAAGCGCGATGCGTAGAGCGTATTCC
GTTCACCGCCGTTGCACAGCTG
back to top

protein sequence of jgi.p|Trimin1|351868

>Trimin1|351868|estExt_Genemark1.C_Ctg_1010050 ID=Trimin1|351868|estExt_Genemark1.C_Ctg_1010050|Name=jgi.p|Trimin1|351868|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=330bp
MLLITCWVVYLVSPKLKRKLNSQYAQLLFVRGISYVLPPVEMVVTGDEFC
DGSQAIVIANHQVDADWWYPWCLLRAYGQDAYAKFILKADLGRMPLVGWG
LKGLDFIMLRRDWQVDQKHLMQQLQVFVHDDTPLRLVIFPEGTTMNTTSL
EKSTAFAQKQGRPELKRLLLPRTTGFAACLDCLKDVPSGTVYDLTIAYEG
YSGEVPTWEMGYERARDVTLPSMAKLMAAQRCGRAHIHVAAHEMSAVAAA
GGAEAWLDAAWARKDALLETFIKERRFPGEARVVRVSQDARVFFTAALAL
PAAFVWAAVKVGGACAHALAVAQFGKRDA*
back to top

mRNA from alignment at Contig_101:396190..400240-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_10820 ID=mRNA_10820|Name=jgi.p|Trimin1|351868|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4051bp|location=Sequence derived from alignment at Contig_101:396190..400240- (Tribonema minus UTEX_B_3156 )
ATGCTGCTCATCACCTGCTGGGTGGTATACCTCGTTTCTCCCAAGCTCAA GCGGAAACTGGTAAGGCAGCTGATCAGACTTGTGCCGTGGTCTCTGCGCC TCTGCCATTCTTTTATCAGCTCGCGTTTGCCAGCTTGATACGTACTTCTC AAATGGGATTCTCGATACGTACTTCTCAAATGGGATTCTTGCTACGCAGT TGTTGGCTTAGCTGGGTGCCAAATACTGTTTAGTCACACTATTGTGCTTG GTTGCAAGTCACCTGCGCGGTCTACGGCCGAAGACAGCAACACCTCTACA ATGTGTGAATGTCTGGACCTGTGACATTATGTTAAACACTACAGTCCTGC ACAAAGCCGGTTTTCCTGTTTATTATAGCAGCACTGCTGTCTAATAGTGT CTCTACCAACACGCAATGCGCAGTTTCTGACAACTTCAACTGCTCGTCCC CCCCCCCCCACAGAACTCCCAATACGCGCAGCTGCTGTTCGTACGCGGCA TATCGTACGTGCTACCCCCCGTAGAAATGGTCGTCACCGGCGACGAATTT TGCGATGGCTCCCAGGCAATCGTCATTGCCAACCACCAGGTAGACGCGGA CTGGTGGTACCCCTGGTGTCTGCTGCGCGCCTACGGTCAGGACGCGTACG CCAAGTTTATTCTGAAGGCGGACTTGGGAAGGATGCCGCTTGTGGGGTGG GGACTCAAGGTACGCACTCGATGGAAGTAAATGAGTTACTTCAACTTGTA CTTCCTGTCGATTCGGCATTTGTTTTTCAGCTGGGGGCGCGTTATGCCTG CTGCATCCGCGCTGCATGACCAAAATGTATGGGCCAAATGCGTTGTCTCG TGAGGTTACCGCTCACTAGCGACGGAGATCAAATTGCGAGGAAGTTATAT GCACAGTGACTGAGGCAATCGGACTCCCATCTAGTATCAGCATACAGTAT GATTCATACTATCATGGCTTTATGAAAACGAATCAAAAGATCGTAGAGCT CTAGGCGACAAGGGATGGTTAGCCGCAAGTGCCTTCCACCAATAACCGTG GTCGCCGCTGCTGCAGCAGTTGGCCACGAGTCAAGCAGTACCACCGTATC CACCAGTCAAAAGGCTTCTGTGTGCAAGCTTTTAGCGTTCGAGGCATGGG TGTTCAGTATTGGAACAGTCTCACGTGTTCTGTAGGCCAGCTCCAGCCGG CAGCCCAACACAGAGGTTCAGCAGCTAGTGACAGCGCTCTTGAATGCGCG TCGTGTAGAAGGTGATGACGCGGGTTTTGAACCAATCCATGCGGCGACAT GGAGGTTCCAGGTTGTTTAGCACGAGCTATCCGTAGCGTTCTCCTTTCCT CACCTACGAGCAGTAGCGTAGCAGGCGGAGCGCGGGTCAGGAGTCTTGTC TGACCCCCTAGCTTCGCCGCGCTAGAGGGTAAGCCTCCTTTCTCTAACTC CAGCTGCCCAGTTTCCTCTCCGTCCCGGGTCGTCCGTCGTCATGTTGAAA AAGAGAACCTATGTCGTACGTAATAGCTGCACTTTCTTCGACCTATTGAC ATTATGCAGGGCACTGATATGTGCTCCCCTGCATAAGCGAATCATATACA ATGATCCACTACGATGGCAACTTACCGTTACATCTTGATAAAAGAATTCT GGATTTACTGCAAGTTGACGGTATACGCAAGCGCCATTCCATATCGCCAC GGTTGTCTACGACTTTTGTCTTTAACTGCTGACTTGTTCGTTCCTTCCCA CCCGATGCAATGCCTGTGCCGAAGCATGACATTTTTAGGCGTTATGTGTA CTGCCTACTTTTTCATGCAGGCTCGCCCGCAAGGCTGTCGGTTGTGCCTC GCCACATGTCTTCTGCAGGAAAGCTACCTTGAAAATACACACAGAAAAGG AAAAGAAAACATCACAAGAAAAAACTATTCGTAATTGGGAGCTGACCATA CTGCGGATTATTTGTTCACATCGCTGGGAACTTGAACGATTGCCGTAGAT CAAGCTGCAGATACTTGGTTGAAGGAATTGCCACTGCAAACGCCATTGCA TGCATGCTCAGTCAGTCGCGGAGTCCTCCACTGCAGGACGAGTACCCACA AGAGCAAAACCTTGCTGAACGTTACTCACTTCAAGACTACGGTGCATCTC ACCGTCGTCAGCTGCGCAGCCTTCAACAGCCATTGCTACAGCGCGCATAT GCCCTTGCAGTACATGTCTGTGTGCAGTACACCCTGGCAGTACATCTGGT GTACTGCGATGCACTCAAAAGCACGCTATGCCGTTGCCGGAGGGCATTCC ACAATGCTGATTCCTCTGCTAATGTTATTTATTTACTGCACCCTCCGACT CGCATTTGCCTACCCCATGCGCACAGGGCCTGAGCTTTGTGTAGCTGCCG TGGAACAGAAGCACATATCTACGCATCACGTGCCCTACAAGTTCTAACCC AAACCCCAGAGGTGTGCAACTTCAGCCACATCACCACTGCTTCAGTGCAT ATGCTGGTGCAGTCTTATTTGCGCAATGCCTCACCTGCTGTCCCCTCCCC CTCCACTTCCCCCCTGCTTGCGCAAACCCTAATGGCAGGGTTTGGACTTC ATCATGCTGCGGCGCGACTGGCAGGTGGACCAGAAGCACCTGATGCAGCA GCTGCAGGTGTTTGTGCATGATGATACCCCGCTGCGCCTGGTCATCTTTC CAGAGGGCACCACCATGAATACCACCAGCCTAGAGAAGTCCACTGCGTTT GCACAGAAGGTGAGAGGGGCACGAATCCTGAATTTCGTGCCTGATTTTGG GCAGTTTGGTCTGGTGCCCATTTTTATTGCTTTGAACTTAAGGCATCATA TCAGTACCTTTGGGCATTGTGATGCTTTCAGTTGCGCTTCTGCATACAAC ATTAATGCAGGGATGTTGTGTATTCTGTTGACCGGACTGAGCAGAAATAC AGAGTGGCTGTACTTCAACCCTTGACGGAGACGTATATCAATACAGACAA AATGCATCACACTGCAAGGAGCAGCCAATCTGTACCTGCAGTCTTTGCTG TGATGATGATGCGCGACTGGGTACAGAAGCAGGTGTGCTTGTTCTATTGT ACCTTGCACCTGCAGCAGCGCTCACACTGTTGGACATTTCGGCAGGCGCC CTGCACAGCAAGCTTTGCGTTACACGTACAGTGAGAGATTACTCCTGACC CTAATTTCAACTGTATAAACTTCAAGGCACAAGGTAATACTTGCAGTATC TAGAGTCATCGATGGGCACGTCACCTCATGCACCTCAGTAGTCCCCTCAT GCCTGGGGTATGCACGCACCCAACAGCCGCAAGCACCACTTCAGCAGAGC AGTCCGTTCACAATTAGGGCAAGGTTCAGATTAGGGGTAGGGTTAAGGGT TAGGCCCTCAACTGACCTGCCGCACCACTCACCGCTCACACGCGGGCGCT ACGCAGCAAGGGCGGCCCGAGCTCAAGCGCCTCCTGCTGCCGCGCACCAC GGGTTTCGCGGCGTGCCTCGACTGCCTCAAGGACGTCCCCAGCGGCACCG TTTACGACCTGACCATCGCGTACGAGGGGTACAGCGGCGAGGTCCCCACG TGGGAGATGGGCTACGAGAGAGCGCGAGACGTGACACTCCCCAGCATGGC CAAGCTGATGGCGGCGCAGCGCTGCGGCCGCGCGCACATTCATGTCGCCG CGCACGAGATGAGTGCTGTTGCGGCGGCGGGCGGCGCGGAGGCGTGGCTC GACGCCGCCTGGGCGCGCAAGGACGCGCTCCTCGAGACCTTCATTAAAGA GCGGCGTTTCCCTGGGGAGGCGCGCGTCGTGCGCGTGTCGCAGGATGCGC GAGTGTTCTTCACGGCGGCGCTGGCGCTGCCGGCGGCGTTCGTGTGGGCA GCGGTGAAGGTCGGGGGGGCGTGCGCGCACGCGCTGGCGGTCGCGCAGTT CGGCAAGCGCGATGCGTAGAGCGTGTACCGTTCTCCGCCGTTGCGCAGTT GGACAAGCGCGATGCGTAGAGCGTATTCCGTTCACCGCCGTTGCACAGCT G
back to top

Coding sequence (CDS) from alignment at Contig_101:396190..400240-

>mRNA_10820 ID=mRNA_10820|Name=jgi.p|Trimin1|351868|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=990bp|location=Sequence derived from alignment at Contig_101:396190..400240- (Tribonema minus UTEX_B_3156 )
ATGCTGCTCATCACCTGCTGGGTGGTATACCTCGTTTCTCCCAAGCTCAA
GCGGAAACTGAACTCCCAATACGCGCAGCTGCTGTTCGTACGCGGCATAT
CGTACGTGCTACCCCCCGTAGAAATGGTCGTCACCGGCGACGAATTTTGC
GATGGCTCCCAGGCAATCGTCATTGCCAACCACCAGGTAGACGCGGACTG
GTGGTACCCCTGGTGTCTGCTGCGCGCCTACGGTCAGGACGCGTACGCCA
AGTTTATTCTGAAGGCGGACTTGGGAAGGATGCCGCTTGTGGGGTGGGGA
CTCAAGGGTTTGGACTTCATCATGCTGCGGCGCGACTGGCAGGTGGACCA
GAAGCACCTGATGCAGCAGCTGCAGGTGTTTGTGCATGATGATACCCCGC
TGCGCCTGGTCATCTTTCCAGAGGGCACCACCATGAATACCACCAGCCTA
GAGAAGTCCACTGCGTTTGCACAGAAGCAAGGGCGGCCCGAGCTCAAGCG
CCTCCTGCTGCCGCGCACCACGGGTTTCGCGGCGTGCCTCGACTGCCTCA
AGGACGTCCCCAGCGGCACCGTTTACGACCTGACCATCGCGTACGAGGGG
TACAGCGGCGAGGTCCCCACGTGGGAGATGGGCTACGAGAGAGCGCGAGA
CGTGACACTCCCCAGCATGGCCAAGCTGATGGCGGCGCAGCGCTGCGGCC
GCGCGCACATTCATGTCGCCGCGCACGAGATGAGTGCTGTTGCGGCGGCG
GGCGGCGCGGAGGCGTGGCTCGACGCCGCCTGGGCGCGCAAGGACGCGCT
CCTCGAGACCTTCATTAAAGAGCGGCGTTTCCCTGGGGAGGCGCGCGTCG
TGCGCGTGTCGCAGGATGCGCGAGTGTTCTTCACGGCGGCGCTGGCGCTG
CCGGCGGCGTTCGTGTGGGCAGCGGTGAAGGTCGGGGGGGCGTGCGCGCA
CGCGCTGGCGGTCGCGCAGTTCGGCAAGCGCGATGCGTAG
back to top