mRNA_10433 (mRNA) Tribonema minus UTEX_B_3156
|
Overview
Homology
BLAST of jgi.p|Trimin1|349776 vs. uniprot
Match: A0A836CCE1_9STRA (Nrap protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCE1_9STRA) HSP 1 Score: 1730 bits (4481), Expect = 0.000e+0 Identity = 1074/1074 (100.00%), Postives = 1074/1074 (100.00%), Query Frame = 1
Query: 1 MAAAAVASACIPPRRLAASSALSGLLRFVLLLARHDWAAAPLVVDFHGELAPAHYAAAAEACDAARACGGVSAHAYTAVLVTTGLGFNILARVSAEALAELEADARDTLDLLQRGGSGARAAGSGGGASARTGSAAFSALFLTRASFWRRYDAFVRIPRQKTAPPPPPHARTPRRALAARAAPLLRRALGDRTAAARPLRGASAEDAADFAGAPGTAHAASRDLLATSSSAQLGAXXXXXXXXXXXEELVVGLLLNAESAARAVDCGPSAEDAATAAAFRAFWGTRAELRRFKDGAIVEAVVWGGXXXAGARPREDAVVEEVVRHALARHEPERCGGXXXXXGSSGVRFAGHADVHRLIAASGYSDSGGGSAENGDXXXXXXXXXAVTLASVGAALPAAAAADPDDALTRLAVAAYDALAVKLRALEGLPLRVDAVAAAAPALRFTAALPPLPHALAAGAGEEVPLWGGDARGRRGGGGGIKRVTSQRGSATRDDSGVGALHSPAPHCIAFRYRLLALASVISPVMWCCRARSPRCPLARVVPVLPLVVRFERSSKWPKEAGAVQHTIAAFLLRVSQCLEAQHEVPSRVVTPQGGTQGEXXXXXXXSCEGVALDVFTGGYCFRLRVWNDVEAIALKEAAAKGDTDAAAAVDALERDLMTAPLHHTLDXXXXXXXXXXXXXXXXXXXXXXLVAGFHARHRAFGPTARAAQRWVHAHMLSDHVPVEAVELITAALWTQXXXXXXXXXXTQGXXXXXXXXXXXXXXXXXXXXXXXXXXXSPLPPPLTALSGLLRFLLLVARHDWAAAPLVVDFHGELAPADHAAAAEACDAARARGGVSAPGAVAGAAAALPCAMFIVAPYDRAAGSGDNSSSALRLDAHLDAHRPEAPVLGRLRALAAASADAMLRWLRTGGSGGSSIDALFVLAPGEAAGFAARIPARSCWRARRRAARAYRNVALGXXXXXXXXALHAGLDPVAQLVRELRRRFGHLALFLRDALAGSSVAVVWRPAAFLPAPLAPLAARYAAXXXXXXXXXXXXXXXXXALPADALSVPNVAQILAEMRAVAGDMADAVVPYW 3222
MAAAAVASACIPPRRLAASSALSGLLRFVLLLARHDWAAAPLVVDFHGELAPAHYAAAAEACDAARACGGVSAHAYTAVLVTTGLGFNILARVSAEALAELEADARDTLDLLQRGGSGARAAGSGGGASARTGSAAFSALFLTRASFWRRYDAFVRIPRQKTAPPPPPHARTPRRALAARAAPLLRRALGDRTAAARPLRGASAEDAADFAGAPGTAHAASRDLLATSSSAQLGAXXXXXXXXXXXEELVVGLLLNAESAARAVDCGPSAEDAATAAAFRAFWGTRAELRRFKDGAIVEAVVWGGXXXAGARPREDAVVEEVVRHALARHEPERCGGXXXXXGSSGVRFAGHADVHRLIAASGYSDSGGGSAENGDXXXXXXXXXAVTLASVGAALPAAAAADPDDALTRLAVAAYDALAVKLRALEGLPLRVDAVAAAAPALRFTAALPPLPHALAAGAGEEVPLWGGDARGRRGGGGGIKRVTSQRGSATRDDSGVGALHSPAPHCIAFRYRLLALASVISPVMWCCRARSPRCPLARVVPVLPLVVRFERSSKWPKEAGAVQHTIAAFLLRVSQCLEAQHEVPSRVVTPQGGTQGEXXXXXXXSCEGVALDVFTGGYCFRLRVWNDVEAIALKEAAAKGDTDAAAAVDALERDLMTAPLHHTLDXXXXXXXXXXXXXXXXXXXXXXLVAGFHARHRAFGPTARAAQRWVHAHMLSDHVPVEAVELITAALWTQXXXXXXXXXXTQGXXXXXXXXXXXXXXXXXXXXXXXXXXXSPLPPPLTALSGLLRFLLLVARHDWAAAPLVVDFHGELAPADHAAAAEACDAARARGGVSAPGAVAGAAAALPCAMFIVAPYDRAAGSGDNSSSALRLDAHLDAHRPEAPVLGRLRALAAASADAMLRWLRTGGSGGSSIDALFVLAPGEAAGFAARIPARSCWRARRRAARAYRNVALGXXXXXXXXALHAGLDPVAQLVRELRRRFGHLALFLRDALAGSSVAVVWRPAAFLPAPLAPLAARYAAXXXXXXXXXXXXXXXXXALPADALSVPNVAQILAEMRAVAGDMADAVVPYW
Sbjct: 1 MAAAAVASACIPPRRLAASSALSGLLRFVLLLARHDWAAAPLVVDFHGELAPAHYAAAAEACDAARACGGVSAHAYTAVLVTTGLGFNILARVSAEALAELEADARDTLDLLQRGGSGARAAGSGGGASARTGSAAFSALFLTRASFWRRYDAFVRIPRQKTAPPPPPHARTPRRALAARAAPLLRRALGDRTAAARPLRGASAEDAADFAGAPGTAHAASRDLLATSSSAQLGAXXXXXXXXXXXEELVVGLLLNAESAARAVDCGPSAEDAATAAAFRAFWGTRAELRRFKDGAIVEAVVWGGXXXAGARPREDAVVEEVVRHALARHEPERCGGXXXXXGSSGVRFAGHADVHRLIAASGYSDSGGGSAENGDXXXXXXXXXAVTLASVGAALPAAAAADPDDALTRLAVAAYDALAVKLRALEGLPLRVDAVAAAAPALRFTAALPPLPHALAAGAGEEVPLWGGDARGRRGGGGGIKRVTSQRGSATRDDSGVGALHSPAPHCIAFRYRLLALASVISPVMWCCRARSPRCPLARVVPVLPLVVRFERSSKWPKEAGAVQHTIAAFLLRVSQCLEAQHEVPSRVVTPQGGTQGEXXXXXXXSCEGVALDVFTGGYCFRLRVWNDVEAIALKEAAAKGDTDAAAAVDALERDLMTAPLHHTLDXXXXXXXXXXXXXXXXXXXXXXLVAGFHARHRAFGPTARAAQRWVHAHMLSDHVPVEAVELITAALWTQXXXXXXXXXXTQGXXXXXXXXXXXXXXXXXXXXXXXXXXXSPLPPPLTALSGLLRFLLLVARHDWAAAPLVVDFHGELAPADHAAAAEACDAARARGGVSAPGAVAGAAAALPCAMFIVAPYDRAAGSGDNSSSALRLDAHLDAHRPEAPVLGRLRALAAASADAMLRWLRTGGSGGSSIDALFVLAPGEAAGFAARIPARSCWRARRRAARAYRNVALGXXXXXXXXALHAGLDPVAQLVRELRRRFGHLALFLRDALAGSSVAVVWRPAAFLPAPLAPLAARYAAXXXXXXXXXXXXXXXXXALPADALSVPNVAQILAEMRAVAGDMADAVVPYW 1074
BLAST of jgi.p|Trimin1|349776 vs. uniprot
Match: A0A836CBT1_9STRA (Nrap protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT1_9STRA) HSP 1 Score: 994 bits (2569), Expect = 0.000e+0 Identity = 761/1109 (68.62%), Postives = 770/1109 (69.43%), Query Frame = 1
Query: 220 HAYTAVLVTTGLGFNILARVSAEALAELEADARDTLDLLQRGGSGARAAGSGGGA-SARTGSAAFSALFLTRASFWRRYDAFVRIP---------------------RQKTAPPPPPHARTPRRALAARAAPLLRRALGDRTAAARPLRGASAEDAADFAGAPGTAHAASRDLLATSSSAQLGAXXXXXXXXXXXEELVVGLLLNAESAARAVDCGPSAEDAATAAAFRAFWGTRAELRRFKDGAIVEAVVWGGXXXAGARPREDAVVEE--VVRHALARHEPERCGGXXXXXGS--------SGVRFAGHADVHRLIAASGYSDSGGGSAENGDXXXXXXXXXAVTLASVGAALPAAAAADPDDALTRLAVAAYDALAVKLRALEGLPLRVDAVAAAAPALRFTAALPPLPHALAAGAGEEVPLWGGDARGRRGGGGG--IKRVTSQRGSATRDDSGVGALHSPAPHCIAFRYRLLALASVISPVMWCCRARSPRCPLARVVPVLPLVVRFERSSKWPKEAGAVQHTIAAFLLRVSQCLEAQHEVPSRVVTPQGGTQGEXXXXXXX--SCEGVALDVFTGGYCFRLRVWNDVEAIALKEAAAKGDTDAAAAVDALERDLMTAPLHHTL------------DXXXXXXXXXXXXXXXXXXXXXXLVAGFHARHRAFGPTARAAQRWVHAHMLSDHVPVEAVELITAALWTQXXXXXXXXXXTQGXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------SPLPPPLTALSGLLRFLLLVARHDWAAAPLVVDFHGELAPADHAAAAEACDAARARGGVSAPGAVAGAAAALPCAMFIVAPYDRAAGSGDNSSSALRLDAHLDAHRPEAPVLGRLRALAAASADAMLRWLRTGG--SGGSSIDALFVLAPGEAAGFAARIP---------------------------ARSCWRARR--RAARAYRNVALGXXXXXXXXA--LHAGLDPVAQLVRELRRRFGHLALFLRDALAGSSVAVVWRPAAFLPAPLAPLAARYAAXXXXXXXXXXXXXXXXX-ALPADALSVPNVAQILAEMRAVAGDMADAVVPYW 3222
HAYTAVLV TGLGFNILARVSAEALAELEADARDTLDLLQRG SARTGSAAFSALFLTRASFWRRYDAFVRIP + A PR ALAARAAPLLRRALGDR AAARPLRGASAEDAADFAGAPGTAHAASRDLLATS XXXXXXXXXXX LVVGLLLNAESAARAVD GPSAEDAA AAAFRAFWG RAELRRFKDGAIVEAVVWG XXX VVRHALARHEPERCG XXXXX GVRFAGHADVHRLIAASGYSD XXXXXXXXX SVGAALPAAAAADPDDALTRLAVAAYDALA KLRALEGLPLRVDAVAAAAPALRFTAALPPLPHALAAGAGEEVPLWGG ARGRR IKRVTSQ VPVLPLVVRFERSSKWPKEAGAVQHTIAAFLLRVSQCLEAQHEVPSRVVTPQGG +GEXXXXXXX CEGVALDVFTGGYCFRLRV NDVEAIALKEAAAKGD DA AAVDALERDLMTAPLHHT DXXXXXXXXXXXXXXXXXXXXX LVAGFHARHRAFGPTARAAQRWVHAHMLSDHV VEAVELI AALWTQ GXXXXXXXXXXXXXXXXXXXXXXXXX SPLPPP TALSGLLRFLLL+ARHDWAAAPLVVDFHGEL+PADHAAAAEACDA RA + + R D PEAPVLGRLRALAAASADAMLRWLRTGG SG IDALF LAPGEAAGFAARI AR+ R R RA RAYRNVALG A LHAGLDPVAQLVRELRRRFGHLALFLRDALAG SVAVVWRPAAFLPAPLAPLAARYAA XXXXXXXXXXXX ALP DAL+VPNVAQ+LAEMRAVAGDMADAVVPYW
Sbjct: 415 HAYTAVLVDTGLGFNILARVSAEALAELEADARDTLDLLQRGXXXXXXXXXXXXXXSARTGSAAFSALFLTRASFWRRYDAFVRIPVHPRGXXXXXXXXXXXXXXXXXRADAEEDALCDAPPRAALAARAAPLLRRALGDRAAAARPLRGASAEDAADFAGAPGTAHAASRDLLATSXX---XXXXXXXXXXXXXXXLVVGLLLNAESAARAVDRGPSAEDAAAAAAFRAFWGARAELRRFKDGAIVEAVVWGXXXXXXXXXXXXXXXXXXXVVRHALARHEPERCGXXXXXXXXXXXXXXXXGGVRFAGHADVHRLIAASGYSDGXXXXXXXXXXXXXXXXXXXXXXXSVGAALPAAAAADPDDALTRLAVAAYDALAAKLRALEGLPLRVDAVAAAAPALRFTAALPPLPHALAAGAGEEVPLWGGSARGRRXXXXXXXIKRVTSQ------------------------------------------------------VPVLPLVVRFERSSKWPKEAGAVQHTIAAFLLRVSQCLEAQHEVPSRVVTPQGGARGEXXXXXXXXXGCEGVALDVFTGGYCFRLRVRNDVEAIALKEAAAKGDADAGAAVDALERDLMTAPLHHTTYFFTHNTLTPTYDXXXXXXXXXXXXXXXXXXXXXALVAGFHARHRAFGPTARAAQRWVHAHMLSDHVLVEAVELIAAALWTQASGTHRGGVMDAGXXXXXXXXXXXXXXXXXXXXXXXXXQAVEXXXXXXXTAGRPVXXXXXXXXXXXSPLPPPSTALSGLLRFLLLLARHDWAAAPLVVDFHGELSPADHAAAAEACDA-------------------------------RARARRRWTPTWTRAD-------PEAPVLGRLRALAAASADAMLRWLRTGGGGSGDGGIDALFALAPGEAAGFAARIRTAAALRPCGXXXXXXXXXSVMSGEELLARTAARGARALRAPRAYRNVALGSGGGSSGAAAALHAGLDPVAQLVRELRRRFGHLALFLRDALAGGSVAVVWRPAAFLPAPLAPLAARYAAPAVAGXXXXXXXXXXXXXALPVDALAVPNVAQVLAEMRAVAGDMADAVVPYW 1428
BLAST of jgi.p|Trimin1|349776 vs. uniprot
Match: D7FGX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX0_ECTSI) HSP 1 Score: 319 bits (817), Expect = 1.030e-87 Identity = 335/1053 (31.81%), Postives = 442/1053 (41.98%), Query Frame = 1
Query: 223 AYTAVLVTTGLGFNILARVSAEALAELEADARDTLDLLQRGGSGARAAGSGGGASARTGSAAFSALFLTRASFWRRYDAFVRIP----------RQKTAPPPPPHARTPR-------------RALAARAAPLLRRALGDRTAAARPLRGASAEDAADFAGAPGTAHAASRDLLATSSSAQLGAXXXXXXXXXXXEELVVGLLLNAESAARAVDCGPSAEDAATAAAFRAFWGTRAELRRFKDGAIVEAVVWGGXXXAGARPREDAVVEEVVRHALARHEPERCGGXXXXXGSSGVRFAGHADVHRLIAASGYSDSGGGSAENGDXXXXXXXXXAVTLASVGAALPAAAAADPDDALTRLAVAAYDALAVKLRALEGLPLRVDAVAAAAPALRFTAALPPLPHALAAGAGEEVPLWGGDARGRRGGGGGIKRVTSQRGSATRDDSGVGALHSPAPHCIAFRYRLLALASVISPVMWCCRARSPRCPLARVVPVLPLVVRFERSSKWPKEAGAVQHTIAAFLLRVSQCLEAQHEVPSRVVTPQGGTQGEXXXXXXXSCEGVALDVFTGGYCFRLRVWNDVEAIALKEAAAKGDTDAAAAVDALERDLMTAPLHHTLDXXXXXXXXXXXXXXXXXXXXXXLVAGFHARHRAFGPTARAAQRWVHAHMLSDHVPVEAVELITAALWTQXXXXXXXXXXTQGXXXXXXXXXXXXXXXXXXXXXXXXXXXSPLPPPLTALSGLLRFLLLVARHDWAAAPLVVDFHGELAPADHAAAAEACDAARARGGVSAPGAVAGAAAALPCAMFIVAPYDRAAGSGDNSSSALRLDAHLDAHRPEAPVLGRLRALAAASADAMLRWLR---TGGSGGSSIDALFVLAPGEAAGFAARI-----------PARSCWRA---RRRA-------ARAYRNVALGXXXXXXXXA--------LHAGLDPVAQLVRELRRRFGHLALFLRDALAGSS--VAVVWRPAAFLPAPLAPLAARYAAXXXXXXXXXXXXXXXXXALPADALSVPNVAQILAEMRAVAGDMADAV 3210
A+ AV+V T LGFN+LAR+S+ A+AELE A+ ++ +LQ R G AAF L +TR + WR+ DAFV++P R K A R R ++ R +LR LGDR ARPL G + E A DF G PG + S G L VGL++N A R VD GP AED A FR FWG ++ELRRFKDG+IVEAVVW G GA+ V+E+VVRH L RH+P RC R GHA R G GG A + + DD LTR A+ A L + +A EG+PL+V+A+ AA+P LR+T+ LPP PH LA GE SPAP L + AS IS ++V P + ++VR E SSKWP + AV+ T AFL+R++QCLE ++ + R V + ++DV T GYCFRLR+ + E + L +D + AFG T RAA RW+ HM+ +H+ VEAVEL+ A+L++ +PL PP T ++G LRFLLL+A HDWA APL+VD GEL+ D AAA EA +R R AA AM++VAPY R G + +S RPE PVLGRL ALA ASA++++ WL T G+G F +A E F R+ P C RRR +AY+N+ G L G DP+ LV ELRRRFGHLA+F AG+S + +VWRP AF+P P +++ +SV NV ++L+EM+ V GDM +AV
Sbjct: 475 AFAAVMVDTSLGFNVLARLSSSAVAELEMTAKASIAVLQ----------------GRPG-AAFRRLLMTRTTLWRKCDAFVQVPLVSADADNGKRWKEAAATGTDMEKLRGEEEEGLLDRPLWRHVSDRVTGILREGLGDRCVLARPLCGVAGEAAHDFQGIPGPRGWHPHNPPPASVGGGSGEGKRKNPPL-----LTVGLIVNPTFAGRLVDKGPPAEDGPAARKFRDFWGGKSELRRFKDGSIVEAVVWKGK---GAQRHR--VIEQVVRHVLGRHDPLRCA--DSSSAKQKQRRDGHAVRFRGNELLGLVTVGGSEAVSAE----------------------------DDDLTRSAIKALQLLQERAKAAEGMPLKVEALQAASPLLRYTSLLPPAPHPLANSHGE----------------------------------------SPAP--------LPSKASKIS---------------SQVEP-MEVLVRLETSSKWPDDLDAVRSTGTAFLIRLAQCLEKKYNL--RCVVGRR-----------------SMDVLTAGYCFRLRIGGERE------------------LSLLGKD----------------------------------------KKPAFGLTVRAASRWLEQHMMEEHLRVEAVELLVASLFSDE---------------------------------------APLAPPSTGMAGFLRFLLLLAGHDWATAPLLVDPQGELSSTDRAAATEAFSRSRDRD------------AAGGSAMYVVAPYARDLGWESSWTSP----------RPERPVLGRLVALAKASAESLVGWLSGEGTLGNGPGGWKDAFRMATAEQQTFDVRLVLNAAVMSDTAPTSLCGGETFQRRRVKGCPALQTKAYKNLIGGGVNAGKGGKGGDGTHGPLVVGFDPIGDLVSELRRRFGHLAVFFSPGSAGASGIIGLVWRPTAFVPRPNNVNRSQHMMVVGGEGARGGGEVA--------TMSVLNVVEVLSEMKVVGGDMIEAV 1260
BLAST of jgi.p|Trimin1|349776 vs. uniprot
Match: A0A6H5JEV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEV9_9PHAE) HSP 1 Score: 285 bits (728), Expect = 3.560e-76 Identity = 293/888 (33.00%), Postives = 384/888 (43.24%), Query Frame = 1
Query: 223 AYTAVLVTTGLGFNILARVSAEALAELEADARDTLDLLQRGGSGARAAGSGGGASARTGSAAFSALFLTRASFWRRYDAFVRIP----------RQKTAPPPPPHARTPR-------------RALAARAAPLLRRALGDRTAAARPLRGASAEDAADFAGAPGTAHAASRDLLATSSSAQLGAXXXXXXXXXXXEELVVGLLLNAESAARAVDCGPSAEDAATAAAFRAFWGTRAELRRFKDGAIVEAVVWGGXXXAGARPREDAVVEEVVRHALARHEPERCG--GXXXXXGSSGVRFAGHADVHRLIAASGYSDSGGGSAENGDXXXXXXXXXAVTLASVGAALPAAAAADPDDALTRLAVAAYDALAVKLRALEGLPLRVDAVAAAAPALRFTAALPPLPHALAAGAGEEVPLWGGDARGRRGGGGGIKRVTSQRGSATRDDSGVGALHSPAPHCIAFRYRLLALASVISPVMWCCRARSPRCPLARVVPVLPLVVRFERSSKWPKEAGAVQHTIAAFLLRVSQCLEAQHEVPSRVVTPQGGTQGEXXXXXXXSCEGVALDVFTGGYCFRLRVWNDVEAIALKEAAAKGDTDAAAAVDAL---ERDLMTAPLHHTLDXXXXXXXXXXXXXXXXXXXXXXLVAGFHARHRAFGPTARAAQRWVHAHMLSDHVPVEAVELITAALWTQXXXXXXXXXXTQGXXXXXXXXXXXXXXXXXXXXXXXXXXXSPLPPPLTALSGLLRFLLLVARHDWAAAPLVVDFHGELAPADHAAAAEACDAARARGGVSAPGAVAGAAAA--------------------LP--------CAMFIVAPYDRAAGSGDNSSSALRLDAHLDAHRPEAPVLGRLRALAAASADAMLRWL 2718
A+ AV+V T LGFN+ AR+S+ A+AELE A+ ++ +LQ R G AAF L +TR + WR+ DAFV++P R K A R R ++ R +LR LGDR ARPL G + E A DF G PG R+ G L VGL++N A R VD GP AED A FR FWG+++ELRRFKDG+IVEAVVW G GA+ VVE+VVRH L RH+P RC VRF G+ ++ L+ G GSAE DD LTR A+ A L + +A EG+PL+V+A+ AA+P LR+T+ LPP PH LA GE SPAP L + AS IS ++V P + ++VR E SSKWP + AV+ T AFL+R++QCLE ++ + R V +G +DV T GYCFRLR+ + E L + D A+A + L E ++ AP H T + G H + AFG T RAA RW+ HM+ +H+ VEAVEL+ A+L++ +PL PP T L+G LRFLLL+A HDWA APL+VD EL+ D AAA EA +R RG AG+ A LP AM++VAPY R G + +S RPE PVLGRL ALA ASA++++ WL
Sbjct: 480 AFAAVMVDTSLGFNVFARLSSSAVAELEMTAKASIAVLQ----------------GRPG-AAFRRLLMTRTTLWRKCDAFVQVPLVSANADNGKRWKEAEATGTDMEKLREQEEEGLLDKPLWRHVSDRVTGILREGLGDRCVLARPLCGVAGEAAHDFQGIPGPRGWHPRNPPPAGVGGGSGEGKRKTLPL-----LTVGLIVNPTFAGRLVDKGPPAEDGPAARKFRDFWGSKSELRRFKDGSIVEAVVWKGK---GAQRHR--VVEQVVRHVLGRHDPLRCADSSSAKQRDDHAVRFRGN-ELLGLVTVGGTE---AGSAE-------------------------------DDDLTRSAIKALQVLQERAKAAEGMPLKVEALQAASPLLRYTSLLPPAPHPLANSHGE----------------------------------------SPAP--------LPSKASKIS---------------SQVEP-MEVLVRLETSSKWPDDLDAVRSTGTAFLIRLAQCLEKKYNL--RCVVGRG-----------------LMDVLTAGYCFRLRIGGERELSLLGK-------DKASAPERLALKEAVVLAAPHHST-------------------------IHGLHLQKPAFGLTVRAASRWLEQHMMEEHLRVEAVELLVASLFSDE---------------------------------------APLAPPSTGLAGFLRFLLLLAGHDWATAPLLVDPQVELSSTDRAAATEAFSRSRDRG------MDAGSDNANTRPNRQNHETTTCFDRKKRLPFFADPGGGSAMYVVAPYARDLGWESSWTSP----------RPERPVLGRLVALAKASAESLVGWL 1135
BLAST of jgi.p|Trimin1|349776 vs. uniprot
Match: A0A5D6XL47_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL47_9STRA) HSP 1 Score: 208 bits (530), Expect = 2.560e-51 Identity = 277/1021 (27.13%), Postives = 393/1021 (38.49%), Query Frame = 1
Query: 223 AYTAVLVTTGLGFNILARVSAEALAELEADARDTLDLLQRGGSGARAAGSGGGASARTGSAAFSALFLTRASFWRRYDAFVRIPRQKTAPPPPPHARTP------RRAL---------AARAAPLLRRALGDRTAAARPLRGASAEDAADFAGAPGTAHAASRDLLATSSSAQLGAXXXXXXXXXXXEELVVGLLLNAESAARAVDCGPSAEDAATAAAFRAFWGTRAELRRFKDGAIVEAVVWGGXXXAGARPREDAVVEEVVRHALARHEPERCGGXXXXXGSSGVRFAGHADVHRLIAASGYSDSGGGSAENGDXXXXXXXXXAVTLASVGAALPAAAAADPDDALTRLAVAAYDALAVKLRALEGLPLRVDAVAAAAPALRFTAALPPLPHALAAGAGEEVPLWGGDARGRRGGGGGIKRVTSQRGSATRDDSGVGALHSPAPHCIAFRYRLLALASVISPVMWCCRARSPRCPLARVVPVLPLVVRFERSSKWPKEAGAVQHTIAAFLLRVSQCLEAQHEVPSRVVTPQGGTQGEXXXXXXXSCEGVALDVFTGGYCFRLRVWNDVEAIALKEAAAKGDTDAAAAVDALERDLMTAPLHHTLDXXXXXXXXXXXXXXXXXXXXXXLVAGFHARHRAFGPTARAAQRWVHAHMLSDHVPVEAVELITAALWTQXXXXXXXXXXTQGXXXXXXXXXXXXXXXXXXXXXXXXXXXSPLPPPLTALSGLLRFLLLVARHDWAAAPLVVDFHGELAPADHAAAAEACDAARARGGVSAPGAVAGAAAALPCAMFIVAPYDRAAGSGDNSSSALRLDAHLDAHRPEAPVLGRLRALAAASADAMLRWLRTGG----------SGGSSIDALFVLAPGEAAGFAARIPARSCWRARRRAARAYRNVALGXXXXXXXXALHAGLDPVAQLVRELRRRFGHLALFLRDALAGSSVAVVWRPAAFLPAPLAPLAARYAAXXXXXXXXXXXXXXXXXALPADALSVPNVAQILAEMRAVAGDMADAV 3210
A+ V++ + N+ ARVS A AEL+ ARD++ LQ + F ALF+ R +FW RYD F P AP P A +RA+ + + +L +AL DR RP+ + E ++ VGL L+ ++A R VD GP+A+DAA + AFRAFW T+AELRRFKDGAIVEAVVW + R+ VV+ +VR A H P+ S+ +A DV + + V LA+ L ++ +A +L V ++ A LR L+ LPL+V V R T+ P PH LA E+ A +PA H +++V+ P++ L ++FERSS WP E A++H F + ++ LE + ++ V +DVFTGGY FRL V ++ E + L ++ G T + A A +++ A H + H +H AF PT R AQRW+ LS+ + VEAVEL+ A + S P + LSGLLRFL L+ARHDW APL V +G L A A+ DA+R+ AA AMFI A Y+ D SS R+ A V+ RL ALA + DA++ WL G S + DA+ LA + R+ A R + AA Y+N+ L + G DP QL+ EL FGHLALF + + ++A+ W+P AFLPA + + A A L+VPNV ++LAE+R + G M AV
Sbjct: 390 AFELVVLDSSGRLNLFARVSRSAWAELQHCARDSVQRLQT-----------------SSMDDFRALFIERRAFWTRYDQFFWFP----APAPVDDADDETYSVDEKRAINDMGLERFWSRKLGAVLAQALTDRVTLVRPVLSRAVE------------------------------WPLHGDALPPRRKVAVGLRLDPDTAGRIVDKGPAADDAAASRAFRAFWKTKAELRRFKDGAIVEAVVWDEV----SADRKHQVVDAIVRFIAAAHAPQLARAPSQIKNSNASLYAA-LDVEEVPS--------------------------VALATKSTVLSGSSFESTMNAAAKLWVV-FNGFAKTLRGLDSLPLQVLDVLPIHAGFRGTSLFPVQPHPLAFSKREQ------------------------------------AAAAPAAH----------VSTVLEPLV--------------------LHLQFERSSSWPSEPAALRHAKTGFYVLLAHELETRKQLRCEVARD-------------------GVDVFTGGYVFRLLVQSERE-LGLASGSSSGSTKHSLAYIAAKQETTYAAAHANT------------------------LHALHGKHAAFAPTVRLAQRWLADKFLSNALRVEAVELLVAHTFVTA---------------------------------------SASATPHSVLSGLLRFLQLLARHDWQRAPLAVAVNGGLDDAQRREVAKRFDASRSN-------------AASHPAMFIAADYE----DMDCLSSWTRVAP------AGAVVVARLAALAQTAYDALVHWLEAGAATTGWKPAFASSTAEFDAVLTLAAEQLPAKKMRLEAS---RKQAFAAPVYKNMNLAAVP------VMVGFDPAQQLLDELTAAFGHLALFFFNGVERRAIALSWKPQAFLPAKFRAVTSHLLAPLPAARGDGDDG--------ARTLAVPNVFEVLAEIRRMGGGMIRAV 1138
BLAST of jgi.p|Trimin1|349776 vs. uniprot
Match: W7TWG8_9STRA (Nrap protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWG8_9STRA) HSP 1 Score: 102 bits (255), Expect = 2.160e-18 Identity = 83/216 (38.43%), Postives = 112/216 (51.85%), Query Frame = 1
Query: 751 VGLLLNAESAARAVDCGPSAEDAATAAAFRAFWGTRAELRRFKDGAIVEAVVWGGXXXAGARPREDA--VVEEVVRHALARHEPERCGGXXXXXGSSGVRFAGHADVHRLIAASGYSDSGGGSAENGDXXXXXXXXXAVTLASVGAALPAAAAADPDDALTRLAVAAYDALAVKLRALEG----LPLRVDAVAAAAPALRFTAALPPLPHALAAGA 1380
VG+ ++ A R VD GP AE+ A FRAFWG +AELRRFKDGAIVEAVVWGG A D +VEE++R+ L H R ++ +R G+ V L + S +G AS ++LP+ + +A+T+ A+ A D+L KL+ EG LPL ++AVA +PALR T+ PP PH L GA
Sbjct: 410 VGISIDPMQALRLVDRGPPAEEETKAREFRAFWGQKAELRRFKDGAIVEAVVWGGEGAVTAYTGGDRHKIVEEIMRYTLGYHLRHR----FPPSVATSLRILGNELVMLLELSKERSANG---------------------ASASSSLPSPSLTP--EAMTKAALTALDSLTTKLK--EGVSSCLPLAIEAVAPLSPALRHTSLFPPFPHPLVHGA 596
BLAST of jgi.p|Trimin1|349776 vs. uniprot
Match: A0A7S4JAR4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAR4_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 9.830e-17 Identity = 137/550 (24.91%), Postives = 200/550 (36.36%), Query Frame = 1
Query: 1645 VRFERSSKWPKEAGAVQHTIAAFLLRVSQCLEAQHEVPSRVVTPQGGTQGEXXXXXXXSCEGVALDVFTG--GYCFRLRVWNDVEAIALKEAAAKGDTDAAAAVDALERDLMTAPL----HHTLDXXXXXXXXXXXXXXXXXXXXXXLVAGFHARHRAFGPTARAAQRWVHAHMLSDHVPVEAVELITAALWTQXXXXXXXXXXTQGXXXXXXXXXXXXXXXXXXXXXXXXXXXSPLPPPLTALSGLLRFLLLVARHDWAAAPLVVDFHGELAPADHAAAAEACDAARA---RGGVSAPGAVAGAAAALPCAMFIVAPYDRAAGSGDNSSSALRLDAHLDA-----------------------HRPEAPVLGRLRALAAASADAMLRWLRTGGS---------------------GGSS---------IDALFVLAPG--EAAGFAARIPARSCWRARRRA----ARAYRNVALGXXXXXXXX---------ALHAGLDPVAQLVRELRRRFGHLALFLRDALAGSSVAVVWRPAAFLPAPLAPLAARY 3063
+RFE SSKWP + A+ A L+++++ ++A +G+ E V G GY +R+ + D E L G + + L R+L + + HHT + H RH + R A+RW AHMLSD VP EA+EL+ A+++T +PL PP TA +G +RFL L++ HDWA PL+VD G ++ D + +AAR +GG M+I++P DR A S S+ + + A PE +L R ALAA S + L GG G +S +D + V+ PG AG A + R RA AR LG ++ G PV LV ELRRRFG A+F + LA +AV+WRP ++P P + + + Y
Sbjct: 540 IRFEGSSKWPSDVNAMAAAKCAMLVQLAEGIDAMKR----------NGRGDGCSDFRGPAEVTPRYVNLGYKGYAWRISIRADQELKTLG-----GLRNPTPEAEELRRELTSRHVLGATHHTT------------------------IHAVHTRHPSAAAAVRLARRWTAAHMLSDAVPTEAMELMIASVYTDP---------------------------------------APLEPPATAAAGFVRFLRLLSTHDWARQPLIVDPQGHISAEDSSRIRSQFEAARGLEYKGGPP---------------MYIISPNDREASSSGGQSTLVAPEGDATAPTQQGAAGAGAADESRWYPGFTRELPERVILTRASALAARSEKFLAERLADGGEDCESEGAKAKSSKCWSSVFLEGATSLRSYSVLLRVDPILVVDPGCSSTAGDFTVKAAAADGGGRSRADTPFARGMERRYLGPKPLRKHLYKNVGGPRDSVLIGFQPVESLVEELRRRFGRFAVFFYNDLAPDVIAVLWRPDVYVPQPFSAMHSEY 996
BLAST of jgi.p|Trimin1|349776 vs. uniprot
Match: A0A4D9D5Y6_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5Y6_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 1.450e-16 Identity = 80/214 (37.38%), Postives = 113/214 (52.80%), Query Frame = 1
Query: 751 VGLLLNAESAARAVDCGPSAEDAATAAAFRAFWGTRAELRRFKDGAIVEAVVWGGXXXAGARPREDAVVEEVVRHALARHEPERCGGXXXXXGSSGVRFAGHADVHRLIAASGYSDSGGGSAENGDXXXXXXXXXAVTLASVGAALPAAAAADPDDALTRLAVAAYDALAVKLRALEG----LPLRVDAVAAAAPALRFTAALPPLPHALAAGA 1380
VG+ ++ A R VD GP AE+ A FRAFWG +AELRRFKDGAIVEAVVW G G R + +VEE++R+ L H R ++ +R G+ ++ L+ S + G S+ + +LP+ + +A+T+ A+ A D+L KL+ EG LPL ++AVA +PALR T+ PP PH L GA
Sbjct: 678 VGISIDPMQALRLVDRGPPAEEETKAREFRAFWGQKAELRRFKDGAIVEAVVWRG---GGDRHK---IVEEIMRYTLGYHLRHR----FPPSVATSLRILGN-ELDMLLELSKERSANGASSSS--------------------SLPSPSLTP--EAMTKAALTALDSLTTKLK--EGVSSCLPLAIEAVAPLSPALRHTSLFPPFPHPLVHGA 856
BLAST of jgi.p|Trimin1|349776 vs. uniprot
Match: A0A7S0RXK6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RXK6_9CHLO) HSP 1 Score: 96.3 bits (238), Expect = 2.090e-16 Identity = 84/213 (39.44%), Postives = 108/213 (50.70%), Query Frame = 1
Query: 742 ELVVGLLLNAESAARAVDCGPSAEDAATAAAFRAFWGTRAELRRFKDGAIVEAVVWGGXXXAGARPREDAVVEEVVRHALARHEPERCGGXXXXXGSSGVR-FAGHADVHRLIAASGYSDSGGGSAENGDXXXXXXXXXAVTLASVGAALPAAAAADPDDALTRLAVAAYDALAVKLRALEGLPLRVDAVAAAAPALRFTAALPPLPHALAAG 1377
E++VG +++ A R VD GP+A+D A AA FRAFWG +ELRRF+DG I EAVVWG GAR + + +V +A+ RH+P GS VR AG DV A G + G AE S G P D A +RL +A D L+ +LR LEGL L+V + +PA R T+ PP PH LA G
Sbjct: 230 EVMVGAVVDPTLALRLVDIGPAADDTAAAAKFRAFWGEASELRRFQDGKISEAVVWG--VGPGAR---HTIPDRIVAYAVGRHKPA--------GGSGAVRGAAGALDVVLRERARGPA----GEAE----------------LSAGIE-PGPEEDDAYVAASRLLDSALDKLSRELRGLEGLALKVVSTLPLSPAARHTSPFPPRPHPLAGG 408
BLAST of jgi.p|Trimin1|349776 vs. uniprot
Match: A0A0D2M6P4_9CHLO (Nucleolar protein 6 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2M6P4_9CHLO) HSP 1 Score: 92.4 bits (228), Expect = 1.770e-15 Identity = 119/423 (28.13%), Postives = 158/423 (37.35%), Query Frame = 1
Query: 2068 LVAGFHARHRAFGPTARAAQRWVHAHMLSDHVPVEAVELITAALWTQXXXXXXXXXXTQGXXXXXXXXXXXXXXXXXXXXXXXXXXXSPLPPPLTALSGLLRFLLLVARHDWAAAPLVVDFHGELAPADHAAAAEACDAARARGGVSAPGAVAGAAAALPCAMFIVAPYDRAAGSGDNSSSALRLDAHLDAHRPEAPVLGRLRALAAASADAMLRWLRTGGSGGSSIDALFV----------------------LAPGEAAGFAARIPARSCWRARR-RAARAYRNVALGXXXXXXXXA-----------------LHAGLDPVAQLVRELRRRFGHLALFLRDALAG-SSVAVVWRPAAFLPAPLAPLAARYAAXXXXXXXXXXXXXXXXXALPADALSVPNVAQILAEMRAVAGDMADAVV 3213
LVA ++ AFGPT R A+RW+ +L + EAVEL+ A + + PPP + ++GLLRFL L+A H W APL+VD E+ A A + +A RA G SAP AMFI P D A S +D RP A VL L AAA+A+ + G + ALF + PGE+A + + + +R R A A V A L G DPV + + L RFGHLA+F D G +V V W+PAAF+P+PL P A A L VPN+AQ+L EM + + VV
Sbjct: 247 LVAALEGQYAAFGPTCRLAKRWLGTQLLGSQLGCEAVELLVGAAFC---------------------------------------GPALAPPPASRVTGLLRFLQLLASHPWLRAPLLVDPLREVDAAQRRALLQQYEARRAAG--SAP------------AMFISTPRDMA-------YSRWTVD------RPSAGVLQHLVGAAAAAAEQLSALQERLEGAGDAWGALFAAPLEDFDAWVLLRRDALPHADRVIPGESARLSKHLERHAAGHGKRNRGASADAGVPAAKSANAVLRAFPQRVLASQPTDALLPELLVGFDPVGRYLALLEERFGHLAVFCADTAGGFPAVGVKWQPAAFVPSPLRPALAHCVVEV------------------APGLGVPNLAQVLHEMHLLGEGLVQEVV 585 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349776 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_10433 ID=mRNA_10433|Name=jgi.p|Trimin1|349776|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3312bp|location=Sequence derived from alignment at Contig_49:95348..109840- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCCGCCGCCGCCGTTGCCAGCGCATGCATCCCGCCGCGCCGCCTCGCback to top protein sequence of jgi.p|Trimin1|349776 >Trimin1|349776|estExt_Genemark1.C_Ctg_490013 ID=Trimin1|349776|estExt_Genemark1.C_Ctg_490013|Name=jgi.p|Trimin1|349776|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1075bp MAAAAVASACIPPRRLAASSALSGLLRFVLLLARHDWAAAPLVVDFHGELback to top mRNA from alignment at Contig_49:95348..109840- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_10433 ID=mRNA_10433|Name=jgi.p|Trimin1|349776|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=14493bp|location=Sequence derived from alignment at Contig_49:95348..109840- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_49:95348..109840- >mRNA_10433 ID=mRNA_10433|Name=jgi.p|Trimin1|349776|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=3225bp|location=Sequence derived from alignment at Contig_49:95348..109840- (Tribonema minus UTEX_B_3156 )back to top |