mRNA_10361 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|350591 vs. uniprot
Match: A0A836CB04_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB04_9STRA) HSP 1 Score: 2455 bits (6363), Expect = 0.000e+0 Identity = 1302/1302 (100.00%), Postives = 1302/1302 (100.00%), Query Frame = 1
Query: 1 MTMTTCDRKPAGSKGVACSTSTSLSDAESENESLSSPINRRVLKTEQRRSSFDRRGGVEASDSSDGESIGPAVPIRVAAARQRVILSDSDISDDDGAVDRLENNFAQLQVEESGTAARAKGVKAAASDPLEAVSKRLATIELSDSASDGSSDQSDASGSEDEDESFHSLFSQLYPHQKEGVAWMWGLHTGGMGGVLGDDMGLGWENELGRWLVKACPRAEVVVLSADVPAKRRQGILRTAMRGGALRRGAVCVTSYGLATSRPDLFEDPDGRRKWDYVILDEGHKGWELLLQEVNSYVHKLAMLPLLTRQDSQVQQRGAVKNPTTQLSRAMHGLPTLHRLLVTGTPIQNNLKELWALMDWCCNGHLLKSYKSFAMTYSEPIERGQDRDATPLQVARSQARARELWLMLRPHLLQRSKEDLKRQGAAAXXXXXXXAAAQGTDATNAPEPASGPAMRQLPTKTEVVVWVALSAAQRCAYSDFLASGRVANVLSGDTNPLASITYLKKVCGHTLLLNTAGGTAGGGQWARAADEDEQGAQDASDTEETDGWLSPLALPPRKVVWSLDPSVTPEELKKGSAKLHVAMELLLRLKDEGHRTLVFSQSVRVLDMLQRCLESAAMRFVRIDGSSSDMDRARCISSFNADASLAVCLLSTKVGGYGITLTGANRVVVYDPSWNPAEDRQAVDRAFRIGQTRDVVVYRMITAGTVEEKMYEKQIFKDGLRHTVLDNKGGSARGWGAGLFSRAELKDLFTLGPHGETRLLAQLEERHGPLPKSAHKRQIDCSFSLLHLLAASEHAFQRNLAQRGGHTAYLTSLKPLGVLGVSLHGSWANGAAHDPPAPQSALSRAASSLSSGSGASVANPYVKRAEPEAPVPFIKIRKKSESRAAQQDGGAGGRAPQVIAVDNGDDSDIVTALNGLNLGNAPEGSAAGATGAKSAGHSSVRNGNDGSSGGSRDGFTADQWQRERNAAAKAPPYGQHSSGGSARGPMHQWLNQPRRGAAMVAAAGAMPPQLGRYGSAAACAVDLCDDNDDEEVDVDAHFKRSTAXXXXXGGAHRSAQAKVVGTLAISGKGKLSTKARASAAPQWSASADMALGKPARARPAHGTAAAAIADGGDERKHTNGDAKGKPARSQIAPAADGSAEATGLAGVAAALSYDQSPGERSPSAAVSSTHNVDAMAAINHSSCIGRTDDELSGIRMPIAATGGNSAPAATGSVCAVCREKAQRTAPGITCCRCCCGLSAAAAARYDSLLIEAEVAEHSVTREGGKTGPERALSLYLECLALCDTEPRLQYKVAQLGAELGLL 3906
MTMTTCDRKPAGSKGVACSTSTSLSDAESENESLSSPINRRVLKTEQRRSSFDRRGGVEASDSSDGESIGPAVPIRVAAARQRVILSDSDISDDDGAVDRLENNFAQLQVEESGTAARAKGVKAAASDPLEAVSKRLATIELSDSASDGSSDQSDASGSEDEDESFHSLFSQLYPHQKEGVAWMWGLHTGGMGGVLGDDMGLGWENELGRWLVKACPRAEVVVLSADVPAKRRQGILRTAMRGGALRRGAVCVTSYGLATSRPDLFEDPDGRRKWDYVILDEGHKGWELLLQEVNSYVHKLAMLPLLTRQDSQVQQRGAVKNPTTQLSRAMHGLPTLHRLLVTGTPIQNNLKELWALMDWCCNGHLLKSYKSFAMTYSEPIERGQDRDATPLQVARSQARARELWLMLRPHLLQRSKEDLKRQGAAAXXXXXXXAAAQGTDATNAPEPASGPAMRQLPTKTEVVVWVALSAAQRCAYSDFLASGRVANVLSGDTNPLASITYLKKVCGHTLLLNTAGGTAGGGQWARAADEDEQGAQDASDTEETDGWLSPLALPPRKVVWSLDPSVTPEELKKGSAKLHVAMELLLRLKDEGHRTLVFSQSVRVLDMLQRCLESAAMRFVRIDGSSSDMDRARCISSFNADASLAVCLLSTKVGGYGITLTGANRVVVYDPSWNPAEDRQAVDRAFRIGQTRDVVVYRMITAGTVEEKMYEKQIFKDGLRHTVLDNKGGSARGWGAGLFSRAELKDLFTLGPHGETRLLAQLEERHGPLPKSAHKRQIDCSFSLLHLLAASEHAFQRNLAQRGGHTAYLTSLKPLGVLGVSLHGSWANGAAHDPPAPQSALSRAASSLSSGSGASVANPYVKRAEPEAPVPFIKIRKKSESRAAQQDGGAGGRAPQVIAVDNGDDSDIVTALNGLNLGNAPEGSAAGATGAKSAGHSSVRNGNDGSSGGSRDGFTADQWQRERNAAAKAPPYGQHSSGGSARGPMHQWLNQPRRGAAMVAAAGAMPPQLGRYGSAAACAVDLCDDNDDEEVDVDAHFKRSTAXXXXXGGAHRSAQAKVVGTLAISGKGKLSTKARASAAPQWSASADMALGKPARARPAHGTAAAAIADGGDERKHTNGDAKGKPARSQIAPAADGSAEATGLAGVAAALSYDQSPGERSPSAAVSSTHNVDAMAAINHSSCIGRTDDELSGIRMPIAATGGNSAPAATGSVCAVCREKAQRTAPGITCCRCCCGLSAAAAARYDSLLIEAEVAEHSVTREGGKTGPERALSLYLECLALCDTEPRLQYKVAQLGAELGLL
Sbjct: 1 MTMTTCDRKPAGSKGVACSTSTSLSDAESENESLSSPINRRVLKTEQRRSSFDRRGGVEASDSSDGESIGPAVPIRVAAARQRVILSDSDISDDDGAVDRLENNFAQLQVEESGTAARAKGVKAAASDPLEAVSKRLATIELSDSASDGSSDQSDASGSEDEDESFHSLFSQLYPHQKEGVAWMWGLHTGGMGGVLGDDMGLGWENELGRWLVKACPRAEVVVLSADVPAKRRQGILRTAMRGGALRRGAVCVTSYGLATSRPDLFEDPDGRRKWDYVILDEGHKGWELLLQEVNSYVHKLAMLPLLTRQDSQVQQRGAVKNPTTQLSRAMHGLPTLHRLLVTGTPIQNNLKELWALMDWCCNGHLLKSYKSFAMTYSEPIERGQDRDATPLQVARSQARARELWLMLRPHLLQRSKEDLKRQGAAAXXXXXXXAAAQGTDATNAPEPASGPAMRQLPTKTEVVVWVALSAAQRCAYSDFLASGRVANVLSGDTNPLASITYLKKVCGHTLLLNTAGGTAGGGQWARAADEDEQGAQDASDTEETDGWLSPLALPPRKVVWSLDPSVTPEELKKGSAKLHVAMELLLRLKDEGHRTLVFSQSVRVLDMLQRCLESAAMRFVRIDGSSSDMDRARCISSFNADASLAVCLLSTKVGGYGITLTGANRVVVYDPSWNPAEDRQAVDRAFRIGQTRDVVVYRMITAGTVEEKMYEKQIFKDGLRHTVLDNKGGSARGWGAGLFSRAELKDLFTLGPHGETRLLAQLEERHGPLPKSAHKRQIDCSFSLLHLLAASEHAFQRNLAQRGGHTAYLTSLKPLGVLGVSLHGSWANGAAHDPPAPQSALSRAASSLSSGSGASVANPYVKRAEPEAPVPFIKIRKKSESRAAQQDGGAGGRAPQVIAVDNGDDSDIVTALNGLNLGNAPEGSAAGATGAKSAGHSSVRNGNDGSSGGSRDGFTADQWQRERNAAAKAPPYGQHSSGGSARGPMHQWLNQPRRGAAMVAAAGAMPPQLGRYGSAAACAVDLCDDNDDEEVDVDAHFKRSTAXXXXXGGAHRSAQAKVVGTLAISGKGKLSTKARASAAPQWSASADMALGKPARARPAHGTAAAAIADGGDERKHTNGDAKGKPARSQIAPAADGSAEATGLAGVAAALSYDQSPGERSPSAAVSSTHNVDAMAAINHSSCIGRTDDELSGIRMPIAATGGNSAPAATGSVCAVCREKAQRTAPGITCCRCCCGLSAAAAARYDSLLIEAEVAEHSVTREGGKTGPERALSLYLECLALCDTEPRLQYKVAQLGAELGLL 1302
BLAST of jgi.p|Trimin1|350591 vs. uniprot
Match: A0A7S2E6H2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E6H2_9STRA) HSP 1 Score: 355 bits (911), Expect = 5.260e-99 Identity = 252/699 (36.05%), Postives = 350/699 (50.07%), Query Frame = 1
Query: 505 LFSQLYPHQKEGVAWMWGLHTGGM-GGVLGDDMGLG--------------------------------WENELGRWLVKAC-PRAEVVVLSADVPAKRRQGILRTAMRGGALRRGAVCVTSYGLATSRP-DLFE-DPDGRRKWDYVILDEGHKGWELLLQEVNSYVHKLAMLPLLTRQDSQVQQRGAVKNPTTQLSRAMHGL---PTLHRLLVTGTPIQNNLKELWALMDWCCNGHLLKSYKSFAMTYSEPIERGQDRDATPLQVARSQARARELWLMLRPHLLQRSKEDLKRQGAAAXXXXXXXAAAQGTDATNAPEPASGPAMRQLPTKTEVVVWVALSAAQRCAYSDFLAS--GRVANVLSGDT-NPLASITYLKKVCGHTLLLNTAGGTAGGGQWARAADEDEQGAQDASDTEETDGWLSPLALPPRKVVWSLDPSVTPEELKKGSAKLHVAMELLLRLKDEGHRTLVFSQSVRVLDMLQRCLESAAMRFVRIDGSSSDMDRARCISSFNADAS-LAVCLLSTKVGGYGITLTGANRVVVYDPSWNPAEDRQAVDRAFRIGQTRDVVVYRMITAGTVEEKMYEKQIFKDGLRHTVLDNKGGSARGWGAGLFSRAELKDLFTLGPHGETRLLAQLEERHGPLPKSAHKRQIDCSFSLLHLLAASEHAFQRNLAQRGGHTAYLTSLKPLGVLGVSLH 2472
L+ +LYPHQ+ GV W+ LH + GG+LGDDMG+G WE E L + C PR + VL++DV RR IL A+ + + +T+YGL +S P DL + + R WDYV+LDEGHK +KNPTT++++ H + RLL+TGTPIQNNLKELW+L+DW NG L +F Y+EPIE G+ + AT + ++ +++L LRPH LQR K+ + +LPTK E+VVW LS QR Y ++ S GRVA+VLSG+T +PL +IT+LKK+CGH L+ R A +E R+++ + V P +L + SAKL V + L+ RL+ GHRTL+FSQS +LD++Q LE + F RIDG + + R FNA S + V LLSTK G G+TLTGA+R ++YDPSWNPA+D QAVDR +RIGQTR V VYR I AGTVEE+MYEKQ+ KDG+R VL + G + + F + EL+ LF L G ++ + R L S + D S + A ++ ++ + G ++L S K V+G+S H
Sbjct: 368 LYHRLYPHQRVGVRWIASLHNAPITGGILGDDMGMGKTYQTLTYLGGLMKSKTIRNALIICPVSLMRTWEREARDILERCCVPRITISVLASDVRKPRRHDILVDALTTS-YKYPQLVITTYGLVSSNPLDLIPVENEQERLWDYVVLDEGHK----------------------------------IKNPTTKVTKGCHRICRNEHTRRLLLTGTPIQNNLKELWSLVDWVTNGRLFGKLTTFRNKYAEPIEMGRQKSATEWVLRIAERASKDLQEKLRPHFLQRLKKTTFQD--------------------------------ELPTKRELVVWTHLSPTQREMYKKYVESEGGRVASVLSGETASPLEAITWLKKLCGHPQLV------------CRNAHGEEN----------------------RELLTNHLQEVDPNDLVRESAKLRVLVSLIRRLQKSGHRTLIFSQSTMMLDIIQTVLEP--LEFRRIDGQTKERSRQSAADEFNAQGSDVDVMLLSTKAAGLGLTLTGADRAIIYDPSWNPADDSQAVDRCYRIGQTRSVTVYRFIAAGTVEERMYEKQVLKDGIRRAVLTSGGSATERY----FDKNELRRLFHLEDEGVCPMMEKF--RDATLSSSTNSIAGDGSNN-----DADGNSNKKKIVGGSGKPSFLASHKC--VVGISSH 950
BLAST of jgi.p|Trimin1|350591 vs. uniprot
Match: A0A7S4JE07_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JE07_9STRA) HSP 1 Score: 349 bits (895), Expect = 5.460e-99 Identity = 231/630 (36.67%), Postives = 324/630 (51.43%), Query Frame = 1
Query: 505 LFSQLYPHQKEGVAWMWGLHTGGMGGVLGDDMGLGWENE----LGRWLVKACPRAEVV-----------------------------VLSADVPAKRRQGILRTAMRGGALRRGAVCVTSYGLATSRPDLF--EDPDGRRK-WDYVILDEGHKGWELLLQEVNSYVHKLAMLPLLTRQDSQVQQRGAVKNPTTQLSRAMHGL---PTLHRLLVTGTPIQNNLKELWALMDWCCNGHLLKSYKSFAMTYSEPIERGQDRDATPLQVARSQARARELWLMLRPHLLQRSKEDLKRQGAAAXXXXXXXAAAQGTDATNAPEPASGPAMRQLPTKTEVVVWVALSAAQRCAYSDFLASG-RVANVLSGDTN-PLASITYLKKVCGHTLLLNTAGGTAGGGQWARAADEDEQGAQDASDTEETDGW-LSPLALPPRKVVWSLDPSVTPEELKKGSAKLHVAMELLLRLKDEGHRTLVFSQSVRVLDMLQRCLESAAMRFVRIDGSSSDMDRARCISSFNADAS-LAVCLLSTKVGGYGITLTGANRVVVYDPSWNPAEDRQAVDRAFRIGQTRDVVVYRMITAGTVEEKMYEKQIFKDGLRHTVLDNKGGSARGWGAGLFSRAELKDLFTLGPHG 2265
L+ +LY HQK GV W+ LHT G+GG+LGDDMGLG + LG +V R+ +V V+S+DV K+R +L++AM + + +T+YGL TS P F D +G + W+YVILDEGHK +KNP+T+ ++ H + RLL+TGTP+QNNLKELW L DW + LL+ + F +++PIE G+ ++A+ ++ + EL +LRPH LQR K S +LP+K E+VVW LS QR Y D++ +G V ++L+G+ N PL +IT+LKK+CGH LL++ W D W L K + + SAKL V ++LL+RL+ HRTLVFSQS ++LD++++ L F RIDGS+ + +R R + +FN S +V LLSTK G G+TLTGA+R +VYDPSWNPAED QAVDR FRIGQT+ V VYR I AGTVEE+MYEKQ+FK+G++ ++ N G S + F++ EL+ +F L P G
Sbjct: 210 LYDRLYDHQKVGVQWLASLHTDGIGGILGDDMGLGKTFQTLTFLGGLMVSGTIRSALVCCPVSLLRTWEKEARDILEESFGLDVSISVISSDVSKKKRTQLLQSAMNCST-KYPHLAITTYGLVTSNPYDFIRTDQNGEKMAWNYVILDEGHK----------------------------------IKNPSTKTTKGCHRICKHERTRRLLLTGTPVQNNLKELWTLFDWATSSKLLRKLQYFNNRFAQPIEAGRHKNASDSTISIASKANTELQELLRPHFLQRLK--------------------------------SVEFKDELPSKREIVVWTHLSKKQRQLYEDYVENGGNVQSILAGEINSPLVAITWLKKLCGHPLLVS----------WTE------------------DDWNLLQFDDEGHKTI------------VRDSAKLKVLVDLLIRLRKSRHRTLVFSQSTKMLDIIEKAL--CQFSFARIDGSTKERERQRIVDNFNKQGSRYSVLLLSTKAAGLGLTLTGADRCIVYDPSWNPAEDSQAVDRCFRIGQTKKVTVYRFIAAGTVEERMYEKQVFKEGIKRAIMTNNGSSTERY----FNKDELRRIFQLAPEG 726
BLAST of jgi.p|Trimin1|350591 vs. uniprot
Match: A0A448YWS6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YWS6_9STRA) HSP 1 Score: 338 bits (866), Expect = 6.050e-97 Identity = 229/638 (35.89%), Postives = 326/638 (51.10%), Query Frame = 1
Query: 505 LFSQLYPHQKEGVAWMWGLHTGGMGGVLGDDMGLG--------------------------------WENELGRWLVKACPRAEVVVLSADVPAKRRQGILRTAMRGGALRRGAVCVTSYGLATSRPDLF-EDPDGRRKWDYVILDEGHKGWELLLQEVNSYVHKLAMLPLLTRQDSQVQQRGAVKNPTTQLSRAMHGLPT---LHRLLVTGTPIQNNLKELWALMDWCCNGHLLKSYKSFAMTYSEPIERGQDRDATPLQVARSQARARELWLMLRPHLLQRSKEDLKRQGAAAXXXXXXXAAAQGTDATNAPEPASGPAMRQLPTKTEVVVWVALSAAQRCAYSDFLASGRVANVLSGDT-NPLASITYLKKVCGHTLLLNTAGGTAGGGQWARAADEDEQGAQDASDT-EETDGWLSPLALPPRKVVWSLDPSVTPEELKKGSAKLHVAMELLLRLKDEGHRTLVFSQSVRVLDMLQRCLESAAMRFVRIDGSSSDMDRARCISSFNADAS-LAVCLLSTKVGGYGITLTGANRVVVYDPSWNPAEDRQAVDRAFRIGQTRDVVVYRMITAGTVEEKMYEKQIFKDGLRHTVLDNKGGSARGWGAGLFSRAEL-KDLFTLGPHGETRLLAQLEER 2298
L+ +LY QKEGVAWM GLH +GG+LGDDMG+G WENE R ++ C ++ VLS+DV RQ L A+ + + +TS+GL + P F ++ G++ WDY+ILDE HK +KNP T+ S AM + RL++TGTPI NNL+EL AL + +G +L ++K F + +PIE + DA +V R + +EL +++P+ LQR+K + + LP K E V+W LS+ QR Y+ ++ S V+++L G+ +PL +I++L+K+CGH LL+ E+ A D +D +E D +EL SAKL VA LL L +GHRTL+FSQS +VLD+++R L+ + +RIDGS+ + DR + + FN S + + L+STK GG G+TLTGA+ +VYDPSWNPAED QAVDR +R+GQ ++V V+R+ITAGTVEEK YEKQI KDG+R T+L N G + A F++ EL K +F LG GE L +LE R
Sbjct: 34 LYDKLYDFQKEGVAWMAGLHIPRIGGILGDDMGMGKTFTTLTFLGGLMKAKTINKAVVVAPVSVLRNWENEA-RKILPLCCHVKIQVLSSDVTVYNRQKRLHKALEA---QSPQLVITSFGLVANNPGHFTQNVAGKQVWDYIILDEAHK----------------------------------IKNPNTKTSEAMEVIAKNKKTRRLILTGTPIMNNLRELHALFTFATSGKILGTHKEFQNDFGKPIEAARSADADHFEVKRGEEAMQELQKLIQPYFLQRTKAEYLAES--------------------------------LPAKHEYVLWTNLSSLQREMYTKYIQSEIVSSLLEGEAKSPLFAISWLQKLCGHPLLV-------------------EEKAVDLADGYDEYDA----------------------KELMATSAKLEVAYNLLDALIRKGHRTLIFSQSTKVLDIIERVLKYK-FKLLRIDGSTKEKDRQKYVDEFNESGSDIDIMLISTKAGGQGLTLTGADSCIVYDPSWNPAEDAQAVDRCYRLGQKKEVQVFRLITAGTVEEKRYEKQIHKDGIRRTILTNTGNNT----AKYFTKEELRKKVFVLGNEGECEFLEKLEMR 555
BLAST of jgi.p|Trimin1|350591 vs. uniprot
Match: UPI00074FECEE (DNA excision repair protein ERCC-6-like n=1 Tax=Gekko japonicus TaxID=146911 RepID=UPI00074FECEE) HSP 1 Score: 345 bits (885), Expect = 7.260e-96 Identity = 216/643 (33.59%), Postives = 332/643 (51.63%), Query Frame = 1
Query: 496 FHSLFSQLYPHQKEGVAWMWGLHTGGM-GGVLGDDMGLG--------------------------------WENELGRWLVKACPRAEVVVLSADVPAKRRQGILRTAMRGGALRRGAVCVTSYGLATSRPDLFEDPDGRR-KWDYVILDEGHKGWELLLQEVNSYVHKLAMLPLLTRQDSQVQQRGAVKNPTTQLSRAMHGLPTLHRLLVTGTPIQNNLKELWALMDWCCNGHLLKSYKSFAMTYSEPIERGQDRDATPLQVARSQARARELWLMLRPHLLQRSKEDLKRQGAAAXXXXXXXAAAQGTDATNAPEPASGPAMRQLPTKTEVVVWVALSAAQRCAYSDFLASGRVANVLSGDTNPLASITYLKKVCGHTLLLNTAGGTAGGGQWARAADEDEQGAQDASDTEETDGWLSPLALPPRKVVWSLDPSVTPEELKKGSAKLHVAMELLLRLKDEGHRTLVFSQSVRVLDMLQRCLESAAMRFVRIDGSSSDM-DRARCISSFNADASLAVCLLSTKVGGYGITLTGANRVVVYDPSWNPAEDRQAVDRAFRIGQTRDVVVYRMITAGTVEEKMYEKQIFKDGLRHTVLDNKGGSARGWGAGLFSRAELKDLFTLGPHGETRLLAQLEERHGPLPKS 2319
+ ++ +L+ HQ+EGVA+++GL+ G GG+L DDMGLG W E W P V V A+R++ + R R G V +T+Y + + DGR WDYVILDE HK +K P+ + ++++H +P+ +R+L+TGTP+QNNL+ELWAL D+ C G LL + K+F M Y PI + +++DATP + A + L +++P+ L+RSK+D++++ + + P A P M LP K + +VWV +S Q Y +FL+ + +L +PLA + LKK+C H LL+ + G + ++ +E G +A + W + + ++ E L K S K+ + LL +L++EGHRTLVFSQS ++LD+++R L + + +RIDG+ + + +R + I +F D +V LL+T+VGG G+TLT A RVV++DPSWNPA D QAVDRA+RIGQ +VV+YR+IT GTVEEK+Y +Q+FKD L +K R F++ EL++LFTLG + QL+ HG K+
Sbjct: 106 YEEMYDKLFDHQREGVAFLYGLYRDGRKGGILADDMGLGKTIQIIAFLSGMFDSELIRSVLLVMPTTLVSNWAREFASWT----PGLRVKVFHGTSKAERQRNLERIQKRNG------VLITTYQMILNNWQQLASSDGREFVWDYVILDEAHK----------------------------------IKTPSAKTTKSVHAIPSRNRILLTGTPVQNNLQELWALFDFACQGSLLGTMKTFRMEYENPITKAREKDATPGEKALGLKMSENLMSIIKPYFLRRSKDDIQKKLKSGPQ----------NNLPEDPRKAPAPEMPSLPRKNDFIVWVYVSPIQEEIYRNFLSLDHIKELLMTTRSPLAELNVLKKLCDHPRLLSARACSQLGLATSEYSEREEGGENEADEL-----WGEKMDIE----------RISDEILIKESGKVRFLIALLEQLQEEGHRTLVFSQSRKMLDIIERILTHRSFKLMRIDGTVTHLSEREKRIDAFQNDKDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPYR-----YFTKQELRELFTLGDTRSSTTQLQLQSLHGTQRKT 674
BLAST of jgi.p|Trimin1|350591 vs. uniprot
Match: A0A315V6Y5_GAMAF (Uncharacterized protein (Fragment) n=1 Tax=Gambusia affinis TaxID=33528 RepID=A0A315V6Y5_GAMAF) HSP 1 Score: 331 bits (849), Expect = 4.430e-95 Identity = 224/635 (35.28%), Postives = 335/635 (52.76%), Query Frame = 1
Query: 496 FHSLFSQLYPHQKEGVAWMWGLHTGGM-GGVLGDDMGLG------------WENELGRWLVKACPRAEVV----VLSADVPAKRRQGIL------RTAMRGGALRRGAVCVTSYGLATSRPDLFEDPDGRRK-WDYVILDEGHKGWELLLQEVNSYVHKLAMLPLLTRQDSQVQQRGAVKNPTTQLSRAMHGLPTLHRLLVTGTPIQNNLKELWALMDWCCNGHLLKSYKSFAMTYSEPIERGQDRDATPLQVARSQARARELWLMLRPHLLQRSKEDLKRQGAAAXXXXXXXAAAQGTDATNAPE--------PASGPAMRQLPTKTEVVVWVALSAAQRCAYSDFLASGRVANVLSGDTNPLASITYLKKVCGHTLLLNTAGGTAGGGQWARAADEDEQGAQDASDTEETDGWLSPLALPPRKVVWSLDPSVTPEELKKGSAKLHVAMELLLRLKDEGHRTLVFSQSVRVLDMLQRCLESAAMRFVRIDGSSSDM-DRARCISSFNADASLAVCLLSTKVGGYGITLTGANRVVVYDPSWNPAEDRQAVDRAFRIGQTRDVVVYRMITAGTVEEKMYEKQIFKDGLRHTVLDNKGGSARGWGAGLFSRAELKDLFTLGPHGETRLLAQLEERH 2301
F L +LY +Q++GV++++GL+ G GGVL DDMGLG ++N+L + + P + + S P R + RT RRG V +T+Y + + G+ WDY+ILDE HK +KN +T+ +++ + +P+ +R+L+TGTP+QNNL+E+W L D+ C G LL + K+F Y PI R +++DATP + A + L +++P+ L+R+K +++++ G +A + P+ P SG M +L K +++VW LSA Q Y F++ + +L +PLA + LKK+C H LL+ A A G D++ QG D +ETD + +A +V+ E L S KL + LL RL++EGHRTLVF+ VLD+LQR L + + +R+DG+ + + +R + IS F D +V LL+T+VGG GITLT ANRVV+YDPSWNPA D QAVDRA+RIGQT +VV+YR+IT GTVEEK+Y +Q+FKD L + N G + + FSR ELK+LFTL + QL++ H
Sbjct: 63 FKELHDKLYDYQRDGVSFLYGLYRDGRKGGVLADDMGLGKTIQIISFLSGMYDNDLIKHTLLVMPTSLITNWVKEFSKWTPGMRVKDFHGASKAERTRSLEKVQRRGGVIITTYTMLMNNWQQLASFQGKEFCWDYMILDEAHK----------------------------------IKNSSTKTAKSAYAIPSKNRILLTGTPVQNNLREMWTLFDFACQGTLLGTAKTFKTQYENPITRAREKDATPGEKALGSRMSENLMTLIKPYFLRRTKSEVQKKKTG------------GKEANSEPDNHQYPQDQPTSGAVMPKLTRKNDLIVWTYLSAVQEDIYRQFISLDHIKELLMTTKSPLAELNILKKLCDHPRLLS-ANAIAQFG-----LDQNPQG-----DNDETD--VKSIA------------NVSDETLISESGKLVFLLALLERLREEGHRTLVFAHYRTVLDILQRILGNRGFKLLRLDGTITQITEREKLISRFQTDKRYSVFLLTTQVGGVGITLTAANRVVIYDPSWNPATDAQAVDRAYRIGQTENVVIYRLITCGTVEEKIYRRQVFKDSL---IRQNTGDTKNPFR--YFSRQELKELFTLEDPRSSSTQLQLQDLH 621
BLAST of jgi.p|Trimin1|350591 vs. uniprot
Match: UPI001F037B60 (LOW QUALITY PROTEIN: DNA excision repair protein ERCC-6-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F037B60) HSP 1 Score: 334 bits (856), Expect = 5.770e-95 Identity = 226/659 (34.29%), Postives = 326/659 (49.47%), Query Frame = 1
Query: 457 QSDASGSEDEDESF---------HSLFSQLYPHQKEGVAWMWGLHTGGMGGVLGDDMGLG--------------------------------WENELGRWLVKACPRAEVVVLSADVPAKRRQGILRTAMRGGALRRGAVCVTSYGLA-TSRPDLFEDPDGRR-KWDYVILDEGHKGWELLLQEVNSYVHKLAMLPLLTRQDSQVQQRGAVKNPTTQLSRAMHGLPTLHRLLVTGTPIQNNLKELWALMDWCCNGHLLKSYKSFAMTYSEPIERGQDRDATPLQVARSQARARELWLMLRPHLLQRSKEDLKRQGAAAXXXXXXXAAAQGTDATNAPEPASGPAMRQLPTKTEVVVWVALSAAQRCAYSDFLASGRVANVLSGDTNPLASITYLKKVCGHTLLLNTAGGTAGGGQWARAADEDEQGAQDASDTEETDGWLSPLALPPRKVVWSLDPSVTPEELKKGSAKLHVAMELLLRLKDEGHRTLVFSQSVRVLDMLQRCLESAAMRFVRIDGSSSDM-DRARCISSFNADASLAVCLLSTKVGGYGITLTGANRVVVYDPSWNPAEDRQAVDRAFRIGQTRDVVVYRMITAGTVEEKMYEKQIFKDGLRHTVLDNKGGSARGWGAGLFSRAELKDLFTLGPHGETRLLAQLEERH 2301
QSD S E+ E F ++S+LY HQKE + W W L GG+L DDMG+G WE E +W P VV P +R + +++ GG V +T+YGLA TS L E+ G R WDY+ILDEGHK VKN + + A+HG+P HR ++TGTP+QNNL+E+WAL D+ C G + KSF Y PI R Q+RDAT + + Q + L ++ PH L+R+KE L+ + + +D N P+ P L K + +VWV LS +Q Y DFL+ RV VL +PLA + +KK+C H LL+T G E+ S +E G+ W P ++L + S KL ++LL +LK EGH+TL+F+QS ++LD++++ L+ ++ +R+DG+ + +R I F D S++V LL+T+VGG G+TLT A+RVV++DPSWNPA D QAVDR++RIGQ + VV+YR+IT G++EEK+Y KQ+FK + + R F+ EL+DLF L ++ QLE+ H
Sbjct: 101 QSDKSDEEETSEYFVVSKGFKVPQKIYSKLYNHQKEAIVWFWKLFEDRKGGILADDMGMGKTIQVVSFLAGMFCCGHVNNALIVMPLALLANWEKEFKKW----APEIRVVQYHGKTPKQRGEILIKIQAFGG------VILTTYGLARTSASLLGENRHGNRFTWDYIILDEGHK----------------------------------VKNTANKTTIAIHGIPAQHRFILTGTPVQNNLREMWALFDFVCQGEFWGTSKSFKQQYENPIVRAQERDATAYEKRKGQELSEILRELIAPHFLRRTKEILEMKKTESNNDMPDYVDGA-SDKENEPDNTE-PKTPYLTRKNDFIVWVYLSPSQLRIYEDFLSKDRVKEVLMTKRSPLAKLNVMKKICDHPRLLSTMSNETLG-----LPVEELXNVIVVSYRDEDSGYK-----------WCAPPV---QQLIEESGKLVFLVQLLKQLKSEGHKTLLFTQSRKMLDIIEKVLKEKQIKIIRVDGTIHKIFEREARIHLFQTDPSISVFLLTTEVGGVGLTLTAASRVVIFDPSWNPATDAQAVDRSYRIGQKQSVVIYRLITCGSLEEKIYRKQVFKQAITKQTTGSSKNPYR-----YFTSQELRDLFVLDDPRCSKTQLQLEQMH 689
BLAST of jgi.p|Trimin1|350591 vs. uniprot
Match: UPI00106CDDB0 (DNA excision repair protein ERCC-6-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106CDDB0) HSP 1 Score: 341 bits (875), Expect = 1.720e-93 Identity = 223/663 (33.63%), Postives = 326/663 (49.17%), Query Frame = 1
Query: 463 DASGSEDEDESFH------SLFSQLYPHQKEGVAWMWGLHTGGMGGVLGDDMGLG--------------------------------WENELGRWLVKACPRAEVVVLSADVPAKRRQGILRTAMRGGALRRGAVCVTSYGLATSRPDLFEDPD--GRRKWDYVILDEGHKGWELLLQEVNSYVHKLAMLPLLTRQDSQVQQRGAVKNPTTQLSRAMHGLPTLHRLLVTGTPIQNNLKELWALMDWCCNGHLLKSYKSFAMTYSEPIERGQDRDATPLQVARSQARARELWLMLRPHLLQRSKEDLKRQGAAAXXXXXXXAAAQGTDATNAPEPA-------SGPAMRQLPTKTEVVVWVALSAAQRCAYSDFLASGRVANVLSGDTNPLASITYLKKVCGHTLLLNTAGGTAGGGQWARAADEDEQGAQDASDTEETD---GWLSPLALPPRKVVWSLDPSVTPEELKKGSAKLHVAMELLLRLKDEGHRTLVFSQSVRVLDMLQRCLESAAMRFVRIDGSSSDMDRARCISSFNADASLAVCLLSTKVGGYGITLTGANRVVVYDPSWNPAEDRQAVDRAFRIGQTRDVVVYRMITAGTVEEKMYEKQIFKDGLRHTVLDNKGGSARGWGAGLFSRAELKDLFTLGPHGETRLLAQLEERH 2301
DA+ +D++E ++ ++LYP+Q EGV W W L+ GG+LGDDMGLG WE E +W P VV+ +R + + + R G VC+T+YGLA S F + GR WDY+ILDEGHK +KN + + A+ +P + ++TGTP+QNNLKE+WAL D+ C G LL + +SF Y +PI R ++RDA+ + Q + L ++ PH L+R+K+ L++ A+ D +G +L K + ++W+ LS Q Y DF+ RV +L +PLA + LKK+C H LL+T + G D D E+T+ W SP ++L + S KL ++LL+ LK EGHRTLVFSQS ++LD++Q+ L+ ++ +RIDG+ + +R I +F D S +V LL+T+VGG G+TLT A+RVV++DPSWNPA D QAVDRA+RIGQ R VV+YR+IT G++EEK+Y KQ+FK + + R FSR EL++LF L H ++ QLE+ H
Sbjct: 97 DANADDDDEEDVEGFKLPKAIHNKLYPYQIEGVMWFWKLYEEKKGGILGDDMGLGKTIQVISFLAGMFRSGHVKTVLIVMPVSLLSNWEKEFKKW----APEIRVVLFHGSSVKQRTENLGKIQSRKG------VCLTTYGLACSCSAQFSEDKYGGRFTWDYIILDEGHK----------------------------------IKNTANKTTIAIRAIPAANHFILTGTPVQNNLKEMWALFDFVCQGQLLGTSRSFKKEYEQPIVRARERDASAYEKRMGQEISAHLRELIAPHFLRRTKDILEQSKKASTSEDVKHHDDGDDDGXXXXXXXXKENVDHNGRKKPKLTRKNDFIIWLYLSQTQLQIYEDFVKLDRVKEILMTTKSPLAELNVLKKICDHPRLLSTMACK-------------QLGLSDELDDEDTECKYEWCSPPV----------------DQLVEESGKLVFLLQLLVNLKREGHRTLVFSQSRKMLDIIQKVLKDKGIKMIRIDGTVDNYERESRICTFQTDPSYSVFLLTTQVGGVGLTLTAADRVVIFDPSWNPATDAQAVDRAYRIGQKRTVVIYRLITCGSLEEKIYRKQVFKQAITKQTTGSSINPFR-----YFSRHELRELFVLDDHRSSKTQIQLEKMH 681
BLAST of jgi.p|Trimin1|350591 vs. uniprot
Match: UPI001EE5155C (LOW QUALITY PROTEIN: DNA excision repair protein ERCC-6-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5155C) HSP 1 Score: 341 bits (875), Expect = 3.250e-93 Identity = 232/661 (35.10%), Postives = 328/661 (49.62%), Query Frame = 1
Query: 496 FHSLFSQLYPHQKEGVAWMWGLHTGGMGGVLGDDMGLG--------------------------------WENELGRWLVKACPRAEVVVLSADVPAKRRQGILRTAMRGGALRRGAVCVTSYGLA-TSRPDLFEDPDGRRKWDYVILDEGHKGWELLLQEVNSYVHKLAMLPLLTRQDSQVQQRGAVKNPTTQLSRAMHGLPTLHRLLVTGTPIQNNLKELWALMDWCCNGHLLKSYKSFAMTYSEPIERGQDRDATPLQVARSQARARELWLMLRPHLLQRSKE---DLKRQGAAAXXXXXXXAAAQGTDATNAPEPASGPAMRQLPTKTEVVVWVALSAAQRCAYSDFLASGRVANVLSGDTNPLASITYLKKVCGHTLLLNTAGGTAGGGQWARAADEDEQGAQDASDTEETDGWLSPLALPPRKVVWSLDPSVTPEELKKGSAKLHVAMELLLRLKDEGHRTLVFSQSVRVLDMLQRCLESAAMRFVRIDGSSSDM-DRARCISSFNADASLAVCLLSTKVGGYGITLTGANRVVVYDPSWNPAEDRQAVDRAFRIGQTRDVVVYRMITAGTVEEKMYEKQIFKDGLRHTVLDNKGGSARGWGAGLFSRAELKDLFTLGPHGETRLLAQLEERHGPLPKSAHKRQIDCSFSLLHLL 2367
+ + +LY HQKEG+ W W L+ GG+LGDDMGLG WE E +W P V + ++ + + + R G VC+TSYGL TS L + WDYVILDEGHK +KNPT + ++ +H +P +R+++TGTP+QNNL+ELWAL D+ G LL + ++F M Y PI R ++RDAT + Q A L ++ P+ L+R+K D K QG + T P L K ++VVWV L+ Q Y DFLA V +L +PL ++T LKK+C H LL+T A+ + E G D TD S + K+ + E L S KL V ++LL LK EGHR LVFSQS ++LD++Q+ + + + +R+DG+ + + DR + I F D+S +V LL+T+VGG G+TLT A+RVV+YDPSWNPA D QAVDR FRIGQ ++VV+YRMIT G+VEEK+Y +QIFKD + N R F++ EL++LFTL ++ QL++ HG +S + +D + LH L
Sbjct: 133 YREFYEKLYMHQKEGLLWFWDLYRKKKGGILGDDMGLGKTIQVIGFLSGMFDMDKIKSVLIVMPVSVVGNWEKEFSKW----APGIRVTLYHGTSKREKERALAKVQRRSG------VCLTSYGLVVTSSEQLSQRDKSEFVWDYVILDEGHK----------------------------------IKNPT-KTTKGVHAIPARNRIILTGTPVQNNLRELWALFDFVHQGQLLGTSRTFKMEYENPIIRSRERDATAGERRLGQEMAESLKKIIEPYFLRRTKAEVTDKKNQGEQKAEDGKK-------ELTKMPS---------LGRKNDLVVWVFLTQTQLKIYEDFLALDSVKELLMTSKSPLVALTVLKKICDHPRLLSTKA-------CAQLGLDGEDGLND------TDYSPSGMECAANKIN-----HIDDEVLIGESGKLLVLVDLLDNLKSEGHRCLVFSQSRKLLDIIQKVVTNRGHKVMRLDGTITQLCDRDQRIQKFQTDSSFSVFLLTTQVGGMGLTLTSADRVVIYDPSWNPATDAQAVDRVFRIGQNKNVVIYRMITCGSVEEKIYRRQIFKDSITRQTTGNSKNPYR-----YFTKGELRELFTLDDARFSKTQRQLQDMHGVDRRSDPR--LDTHIAYLHSL 707
BLAST of jgi.p|Trimin1|350591 vs. uniprot
Match: A0A6J8B126_MYTCO (ERCC6L n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8B126_MYTCO) HSP 1 Score: 342 bits (878), Expect = 6.980e-93 Identity = 228/642 (35.51%), Postives = 325/642 (50.62%), Query Frame = 1
Query: 496 FHSLFSQLYPHQKEGVAWMWGLHTGGMGGVLGDDMGLG--------------------------------WENELGRWLVKACPRAEVVVLSADVPAKRRQGILRTAMRGGALRRGAVCVTSYGLATSRPDLFEDPDGRR-KWDYVILDEGHKGWELLLQEVNSYVHKLAMLPLLTRQDSQVQQRGAVKNPTTQLSRAMHGLPTLHRLLVTGTPIQNNLKELWALMDWCCNGHLLKSYKSFAMTYSEPIERGQDRDATPLQVARSQARARELWLMLRPHLLQRSKEDLKRQGAAAXXXXXXXAAAQGTDATNAPEPASGPAMRQLPTKTEVVVWVALSAAQRCAYSDFLASGRVANVLSGDTNPLASITYLKKVCGHTLLLNTAGGTAGGGQWARAADEDEQGAQDASDTEETDGWLSPLALPPRKVVWSLDPSVTPEELKKGSAKLHVAMELLLRLKDEGHRTLVFSQSVRVLDMLQRCLESAAMRFVRIDGSSSDM-DRARCISSFNADASLAVCLLSTKVGGYGITLTGANRVVVYDPSWNPAEDRQAVDRAFRIGQTRDVVVYRMITAGTVEEKMYEKQIFKDGLRHTVLDNKGGSARGWGAGLFSRAELKDLFTLGPHGETRLLAQLEERHGPLPKS 2319
+ LF +LY HQKE V WMWGLH GG+LGDDMGLG WE E +W P V ++ + + + RGG V +TSYGL + ++ DGR WDYV LDEGHK +KNPT + ++ +H +P +R+++TGTPIQNNLKELWAL D+ G LL + ++F M Y PI R ++RDAT + Q A L ++ P+ L+R+K ++ G N+ E M L K ++++WV L+ Q+ Y DFL+ V +L +PL ++T LKK+ H LL+T A G DED+ +++A +LS + + ++D + E S KL V +ELL +LK+EGHRTLVFSQS ++LD++ + + + +R+DG+ + + +R + + F D +V LL+T+VGG G+TLT A+RVV+YDPSWNPA D QAVDRAFRIGQ ++VV+YR+IT GTVEEK+Y +QIFKD + N R F++ ELK+LF L + QLEE H K+
Sbjct: 520 YKELFEKLYDHQKEAVLWMWGLHKKRKGGILGDDMGLGKTIQVISFLSGLFDMDKVKSVLIVMPVSLIVNWEKEFQKW----APGIRVEAYHGSSKKEKERALCKVQRRGG------VLLTSYGLVVTSSEVIGKQDGREFVWDYVALDEGHK----------------------------------IKNPT-KTTKGVHAIPARNRIILTGTPIQNNLKELWALFDFVHQGSLLGTARTFKMEYENPITRARERDATVGERKLGQEMATSLKKIIAPYFLRRTKAEVTETK-------------DGVKVENSEEGVGK--MPSLTRKNDLILWVFLTQTQQKIYHDFLSLDTVKELLMTKKSPLVALTVLKKITDHPRLLSTRA-VAQLGLEDHGLDEDQLESEEA--------YLSAV-----NQIKNVDNQILINE----SGKLIVLVELLDKLKEEGHRTLVFSQSRKLLDIIYKVISNRGHMVLRLDGTVTHLSERDQRMQKFQTDERYSVFLLTTQVGGVGLTLTAADRVVIYDPSWNPATDNQAVDRAFRIGQEKNVVIYRLITCGTVEEKIYRRQIFKDSITRQTTGNSTNPYR-----YFTKQELKELFELNDSRVSSTQQQLEEMHSGFRKT 1078 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350591 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_10361 ID=mRNA_10361|Name=jgi.p|Trimin1|350591|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4090bp|location=Sequence derived from alignment at Contig_67:225302..241239- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGACCATGACGACGTGCGACAGGAAGCCAGCAGGTTCAAAGGGCGTTGCback to top protein sequence of jgi.p|Trimin1|350591 >Trimin1|350591|estExt_Genemark1.C_Ctg_670026 ID=Trimin1|350591|estExt_Genemark1.C_Ctg_670026|Name=jgi.p|Trimin1|350591|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1303bp MTMTTCDRKPAGSKGVACSTSTSLSDAESENESLSSPINRRVLKTEQRRSback to top mRNA from alignment at Contig_67:225302..241239- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_10361 ID=mRNA_10361|Name=jgi.p|Trimin1|350591|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=15938bp|location=Sequence derived from alignment at Contig_67:225302..241239- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_67:225302..241239- >mRNA_10361 ID=mRNA_10361|Name=jgi.p|Trimin1|350591|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=3909bp|location=Sequence derived from alignment at Contig_67:225302..241239- (Tribonema minus UTEX_B_3156 )back to top |