mRNA_10320 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|82442 vs. uniprot
Match: A0A835YMB1_9STRA (Thioredoxin-like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMB1_9STRA) HSP 1 Score: 655 bits (1691), Expect = 1.410e-235 Identity = 358/358 (100.00%), Postives = 358/358 (100.00%), Query Frame = 3
Query: 30 MKPPVLLDAGADTLSVHWRAEKGAALYEAQLEDTSSSPGEWTLLSSTLQSTRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQESPQMVRSEAEALTVQWKAVDACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQLLPASLVNAKGETIAASSLAGKVAAIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDPARQAIASALSVNSVPRLMVFSPTGAVLSENAVGVGLPQLKLWCGGNSAQKPAXXXXXXXXXXXXXXXXCC 1103
MKPPVLLDAGADTLSVHWRAEKGAALYEAQLEDTSSSPGEWTLLSSTLQSTRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQESPQMVRSEAEALTVQWKAVDACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQLLPASLVNAKGETIAASSLAGKVAAIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDPARQAIASALSVNSVPRLMVFSPTGAVLSENAVGVGLPQLKLWCGGNSAQKPAXXXXXXXXXXXXXXXXCC
Sbjct: 1 MKPPVLLDAGADTLSVHWRAEKGAALYEAQLEDTSSSPGEWTLLSSTLQSTRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQESPQMVRSEAEALTVQWKAVDACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQLLPASLVNAKGETIAASSLAGKVAAIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDPARQAIASALSVNSVPRLMVFSPTGAVLSENAVGVGLPQLKLWCGGNSAQKPAXXXXXXXXXXXXXXXXCC 358
BLAST of jgi.p|Trimin1|82442 vs. uniprot
Match: A0A6S9IW74_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IW74_HETAK) HSP 1 Score: 233 bits (593), Expect = 1.070e-69 Identity = 127/286 (44.41%), Postives = 177/286 (61.89%), Query Frame = 3
Query: 150 WTLLSSTLQSTRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQESPQMVRSEAEALTVQWKAVDACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQLLPASLVNAKGETIAASSLAGKVAAIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDPARQAIASALSVNSVPRLMVFSPTGAVLSENAVGVGLPQ 1007
WT LSS+ + +++KKNL PG+ Y FR R+ D LG + S +S+ TL G NR++ PQ+ E A+ + W+ V+ +YELQ++ + W TV+ ++ P KKKGL A T+Y+FRVR +F+ D WAFSPPS +SP L L +LP +L+N + + ++ +LAGKV AIY SAHWCGPCR++TPQLA Y + A P EVVFVS D SY + MPW AVP+ D R+ I S V+ +PRLMV P GA+++ENAVG+ L +
Sbjct: 17 WTTLSSSFKGNKVKKKNLEPGKAYTFRYRSRDRLGWN-LFSPSSKPSWTLQSGQNRLENGPQIHAVETGAVMLGWQCVEGASSYELQIS---DAAYPVWQTVSTNIQHPAVKKKGLDANTKYIFRVRPLFAHEDSAS--WAFSPPSSEISPPILSQLLSSMLPVNLINNQNQAVSQGALAGKVVAIYFSAHWCGPCRKFTPQLATFYNQMKAARRPFEVVFVSCDGDAGSMMSYFSEMPWLAVPFDDDKREQIQSDYQVSGIPRLMVVGPGGAIVAENAVGMPLSE 296
BLAST of jgi.p|Trimin1|82442 vs. uniprot
Match: L1IDF0_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IDF0_GUITC) HSP 1 Score: 206 bits (525), Expect = 1.310e-59 Identity = 130/331 (39.27%), Postives = 180/331 (54.38%), Query Frame = 3
Query: 42 VLLDAGADTLSVHWRAEKGAALYEAQLEDTSSSPGEWTLLSSTLQSTRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQESPQMVRSEAEALTVQWKAVDACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQLLPASLVNAKGETIAASSLAGKVAAIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDPARQAIASALSVNSVPRLMVFSPTGAVLSENAVGVGLPQLKL--WCGG 1028
V+ D A+ +++ W A YE Q++ G++T +S +L ST +RKKNL P Y RVR D+L SG S F TL+ + E PQ+V + E++T+QW CE+Y +++ + W T++ +K I +KK L Y FRV+ + G W FSPPS+ ADLP L LL +LV+A+G + SSLAG V A+Y SA WCGPCRQ+TPQL+Q Y +Q P EVVF+S DR F++Y MPW AVP+ R+ AL V +P+L++ G VL +NAVG L KL W G
Sbjct: 5 VVHDVEAEAVTLSWSKVPNAVKYEVQIKQEEG--GDFTTISDSLTSTLVRKKNLKPNTEYFARVRHRDALDWSGFCEPVS--FHTLAGQDVKRLEHPQVVSRDGESITLQWPTAPDCESYTVEIR---SDKDPTWRTISDHLKNNIVRKKNLEKHVMYYFRVKPNLAEGSGS---WFFSPPSEGAMLADLPPFLSNLLSPTLVDAQGTSKPVSSLAGCVVALYCSASWCGPCRQFTPQLSQFYTQMKQLGKPFEVVFLSCDRDSKSFTNYFGHMPWLAVPFDSDKRENALGALQVEGIPKLVIVGANGMVLQDNAVGTPLNAQKLDSWIAG 325
BLAST of jgi.p|Trimin1|82442 vs. uniprot
Match: A0A7S0E8P9_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E8P9_9CRYP) HSP 1 Score: 199 bits (507), Expect = 3.160e-57 Identity = 132/315 (41.90%), Postives = 175/315 (55.56%), Query Frame = 3
Query: 99 AALYEAQLEDTSSSPGEWTLLSSTLQSTRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQESPQMVRSEAEALTVQWKAVDACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRH---VFSGGDDQQQEWAFSPPSDPLSPADLPARLQQLLPASLVNAKGETIAASSLAGKVAAIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDPARQAIASALSVNSVPRLMVFSPTGAVLSENAVGVGLPQLKL--WCGG 1028
A YE Q++ G++T +S +L ST +RKKNL P Y RVR D+L S E T NR+ E+P++V +AE+LTVQW V CE+Y ++M + E L W ++ +K I +KK L Y FRV+ V SG W FSPPS+ + ADLP L LL +L++A+G + SSLAG V A+Y SA WCGPCRQ+TPQL+Q Y +Q P EVVF+S DR FS+Y MPW AVP+ R+ AL V +P+L++ G VL +NAVG L KL W G
Sbjct: 1 AVKYEVQIKQEDG--GDFTTISDSLTSTLVRKKNLKPNTQYFARVRHRDALDWSN-FCEPVPFQTLTGAEVNRL-ENPKIVSKDAESLTVQWPTVPDCESYTVEMRS--DKEPL-WRPISDHLKNNIVRKKNLDKHVMYYFRVKPNLGVESGS------WFFSPPSEGATLADLPPFLSNLLTPTLIDAQGTSKPVSSLAGSVVALYCSASWCGPCRQFTPQLSQFYTQMKQLGKPFEVVFLSCDRDSKSFSNYFGHMPWLAVPFDSDKRENALGALQVEGIPKLVIVGANGMVLQDNAVGTPLNAQKLDSWIAG 302
BLAST of jgi.p|Trimin1|82442 vs. uniprot
Match: A0A7S1IM31_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IM31_9EUGL) HSP 1 Score: 194 bits (494), Expect = 6.310e-55 Identity = 127/323 (39.32%), Postives = 177/323 (54.80%), Query Frame = 3
Query: 30 MKPPVLLDAGADTLSVHWRAEKGAALYEAQLEDTSSSPGEWTLLSSTLQSTRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQESPQMVRSEAEALTVQWKAVDACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQLLPA--SLVNAKGETIAASSLAGKVAAIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDP-ARQAIASALSVNSVPRLMVFSPTGAVLSENAV 989
M+ P +A L++ W A YE Q++ + +W ++S S LRKKNL+P TY+FR+RA DS G G S + TL EGT ++ E+PQ+ ++ +LT++W+AV YE+Q + E WTT A++ + +KK L R Y++RV+ S + +WAFS P + + QL SLV G ++ ++LAGKV AIY SA WC PC+Q+TPQLA Y A + EVVFVS+DR + YL TMPW AV Y D RQAI +V +PRL+VF TG +L ENAV
Sbjct: 1 MEAPTFYEAEVSCLTIGWLPVVNATKYEVQIKGGPDT--DWRTITSEFTSCLLRKKNLLPATTYQFRLRAQDSAG-FGEWSAPTTDLQTLPEGTQQL-EAPQLQSADGVSLTIKWEAVPDATGYEVQFREQSKPE---WTTAIASISSTAMRKKNLEERKAYLWRVKP--SAPEAVSTKWAFSRIGGPFQVPTVSSTCVQLFGTGESLVTNMGHSVPLNTLAGKVVAIYCSASWCPPCKQFTPQLAHFYNAVKNEGHGFEVVFVSMDRDRASWLGYLNTMPWIAVDYDDAQTRQAIPQRYNVQGIPRLIVFGATGQMLEENAV 314
BLAST of jgi.p|Trimin1|82442 vs. uniprot
Match: A0A7S0QF75_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QF75_9CRYP) HSP 1 Score: 183 bits (464), Expect = 4.150e-50 Identity = 125/353 (35.41%), Postives = 180/353 (50.99%), Query Frame = 3
Query: 42 VLLDAGADTLSVHWRAEKGAALYEAQLEDTSSSPGE------------------WTLLSSTLQSTRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQESPQMVRSEAEALTVQWKAVDACEAYELQM--ALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQLLPASLVNAKGETIAASSLAGKVAAIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDPARQAIASALSVNSVPRLMVFSPTGAVLSENAVG--VGLPQLKLWCGGNS 1034
V+ D A + ++ W GA YE QL + ++ P E W +S TL+S+ ++KKNL+PG + RVR DS+ + F T+ E +R+ E+P + S+++++TVQW V+ +Y LQ ++ +G W + A + I +KK L + Y FRV F+ D+ WAFSPPSD S P + LL LV+A G I A SLAG IYASA WCGPCRQ+TP L Y AR +++FVS DR + F SY + MPW A+P+ AR+ + V +PRLM+ + G NAV + L QL W G++
Sbjct: 6 VIQDVDASSATLAWTCCHGALRYELQLVEVTAEPKENCSKSDEVPPDCELPNEMWKTVSETLKSSLIKKKNLMPGTWFAARVRYRDSIDWNSFS--LPVFFRTIQETDHRM-EAPSLHSSDSQSITVQWIPVEHANSYALQYRNSISSDGHPSDWVPLPA-ITGNIIRKKNLNSDGVYCFRVIPNFNEVSDR---WAFSPPSDGFSVCRFPLYTKNLLGMKLVDAAGNEILAESLAGHTLGIYASASWCGPCRQFTPSLISFYNEARANGRKFQIIFVSCDRDKQSFDSYFSKMPWLAIPFESEARENALKEMQVQGIPRLMILNAEGRTAEVNAVQSRLTLGQLDAWSSGST 351
BLAST of jgi.p|Trimin1|82442 vs. uniprot
Match: A0A7S4UKE2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UKE2_9STRA) HSP 1 Score: 172 bits (435), Expect = 5.050e-46 Identity = 125/336 (37.20%), Postives = 177/336 (52.68%), Query Frame = 3
Query: 42 VLLDAGADTLSVHWRAEKGAALYEAQLED-TSSSPGEWTLLSSTLQSTRLRKKNLVPGR-TYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQESPQMVRSEAEALTVQWKAVDACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQLLP----ASLVNAKGETIAAS-----SLAGKVAAIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDP-----ARQAIASALSVNSVPRLMVFSPTGAVLSENAVGVGL 1001
VL+D+ +L++ W A Y + D T++ +T+LS L ST+ RK+NL P + FRVRA D + G + + E + N E+P VQWK +ELQM V+G A AW T+A ++K A+K+ L + Y FRVR + D FSPPS+ + + L +L P +++ K T S +LAGKV +Y SAHWCGPCRQ+TPQLA Y A ++++ VEVVFVSLD E F+SY +MPW AVP+ + R+ + SVN +PRL+V + G+V+ ENAVG L
Sbjct: 16 VLIDSDTTSLTISWPEVPRARRYALEYTDATTNETNAYTVLSDKLTSTQARKRNLDPKHGPFTFRVRARDEVDFIGEMMTSDELNLLSEDEANSRMEAPLATAVGNCCAHVQWKKAHD-NTFELQMRE-VQGGA-AWQTIATSLKNTEARKRNLTSSALYQFRVRPNTT--DSSDGNIPFSPPSNQVQALSISPGLARLFPRGGDGAMLLTKNNTAMTSMKLADALAGKVTMLYFSAHWCGPCRQFTPQLANYYNALKKSSNNVEVVFVSLDHDESSFNSYYKSMPWLAVPFDEDDHGNNVREDLQGRFSVNGIPRLVVLNAQGSVVEENAVGKDL 346
BLAST of jgi.p|Trimin1|82442 vs. uniprot
Match: K8YS41_NANGC (Tsa family domain-containing protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YS41_NANGC) HSP 1 Score: 170 bits (430), Expect = 9.130e-45 Identity = 118/316 (37.34%), Postives = 163/316 (51.58%), Query Frame = 3
Query: 63 DTLSVHWRAEKGAALYEAQLEDTSSSPGEWTLLSSTLQSTRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQESPQMVRSEAEALTVQWKAVDACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQLLPASLVNAKGET----IAASSLAGKVAAIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYS--DPARQAIASALSVNSVPRLMVFSPTGAVLSENAVG 992
D+ + W A + A+ E L D + GEW LS++L+S +RK+NL YRFRVR D + + S TLS R+ V A +T+ W+ V+ AY + M E A+ W V V KKK L A Y FRVR V G+ + W +SP S+ +SP LP L+++ + L G+ I SLAG V +YASAHWC PCRQ+TPQLA Y + A E+VFVSLD+ + F Y +MPW A+P+ + R+A+ + SVPRL++F G +L NAVG
Sbjct: 74 DSQAEDWNAAR--AMEEPGLTDHGDAVGEWCTLSASLKSNMVRKRNLSHSTPYRFRVRVRDKV--DWLPFQTSSLLHTLSTFVQRMAAPRGEVGGAAGCVTLSWEPVEEAAAYAVHMR---EQGAVRWKEVGR-VGGTSVKKKNLEAGKAYHFRVRPV---GERVEDVWVWSPWSEAMSPPSLPPVLRRMFGSRLAVEVGKEGKKEIGVESLAGSVVGVYASAHWCAPCRQFTPQLANFYRGLQGAGKAFEIVFVSLDQEKEAFELYFESMPWLAIPWEGGEGEREALMRMYQITSVPRLLIFGRDGELLENNAVG 378
BLAST of jgi.p|Trimin1|82442 vs. uniprot
Match: A0A7S4K6K6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K6K6_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.240e-43 Identity = 131/340 (38.53%), Postives = 176/340 (51.76%), Query Frame = 3
Query: 42 VLLDAGADTLSVHWRAEKGAALYEAQL--EDTSSSPGEWTLLSSTLQSTRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQ-ESPQMVRSEAEALTVQWKAVD-------ACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQL---LPASLVNAKGETIAA---SSLAGKVAAI-YASAHWCGPCRQYTPQLAQLYAAARQ--ATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDPARQAIASALSVNSVPRLMVFSP-TGAVLSENAVGVGL 1001
VLLDA D+L+V W + GA Y Q E S G++ LS L+ST+ RK+NL P + FR R+ S G G E+F L+ ++ E+P +A V+WKA + + YELQM G W TVA + +KK L +R Y FRVR V + D + AFSPPSDPL L +++L L + G T +LAGK + YASAHWCGPCRQ+TPQL Y + ++ A V+VVF+S D E F SY +TMPW AVPY AR+ + + + V +PRL V TG ++ +NAVG L
Sbjct: 6 VLLDATDDSLTVSWPSVAGADRYVLQYRRESDSEEGGDYETLSENLKSTQARKRNLPPESAFSFRARS--SSGADGEWIGHEESFRLLTAAEQALRMEAPTATADGNQAAVVRWKAPTGGAEAGTSVDGYELQMRENDGGRG--WCTVAPRLGGIEVRKKNLISRLGYQFRVRPV-NPSDGRN---AFSPPSDPLVGRTLSEGMRRLFSDLEDGALLRGGTTTNIPLDDALAGKEFVLFYASAHWCGPCRQFTPQLTNWYKSVKRQPAGTGVDVVFLSADHDEGSFKSYYSTMPWLAVPYDSDAREGLMAHIRVQGIPRLCVLDGRTGRIIEDNAVGKSL 337
BLAST of jgi.p|Trimin1|82442 vs. uniprot
Match: A0A7S1D7H8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D7H8_CYCTE) HSP 1 Score: 161 bits (408), Expect = 4.220e-42 Identity = 124/329 (37.69%), Postives = 174/329 (52.89%), Query Frame = 3
Query: 45 LLDAGADTLSVHWRAEKGAALYEAQLEDTSSSPGE----WTLLSSTLQSTRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEG--TNRIQESPQMVRSEAEALTVQWKAVDACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQLLPA----SLVNAKGETIA-ASSLAGK-VAAIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDPARQAIASALSVNSVPRLMVFSP-TGAVLSENAVG 992
L+DA + +L+V W A A+ Y + + + LSS L ST+ RK+NL Y FRVRAI + EAF LSE +NR+ ++ +AL V+WK + + YELQM G W+T+AA++ +KK L ++ Y FRVR GG D AFSPPS P L ++QL + L+ +++ A +L GK +YASAHWCGPCRQ+TPQL++ Y + Q VEVVF+S D E F SY +MPW AVP+ D AR+ + + V +PRL+V TG ++ +NAVG
Sbjct: 9 LIDATSSSLTVSWPAVADASHYVLEYRKALCGGDDEDELFETLSSKLTSTQARKRNLDFFGGYFFRVRAIKGDNDVKNWVTHEEAFHLLSEADESNRMDPPEAVLAGTNQALLVKWKKHEGADGYELQMRENDGGGK--WSTIAASLSGTEVRKKNLTSKLGYQFRVRPA--GGVDA----AFSPPSSPAVALGLSNGMKQLFSSLGEGKLLQDPSKSLPLADALGGKEFVLLYASAHWCGPCRQFTPQLSKWYQSLPQKN--VEVVFLSCDHDENGFESYFKSMPWLAVPFDDDARENLLGYIRVKGIPRLVVLDGRTGRIIVDNAVG 327 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|82442 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_10320 ID=mRNA_10320|Name=jgi.p|Trimin1|82442|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1302bp|location=Sequence derived from alignment at Contig_63:618787..622913- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CGGCAACTTCTCCGCAAGGCTCGCTAGCAATGAAGCCACCTGTGCTGCTGback to top protein sequence of jgi.p|Trimin1|82442 >Trimin1|82442|CE82441_148 ID=Trimin1|82442|CE82441_148|Name=jgi.p|Trimin1|82442|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=359bp MKPPVLLDAGADTLSVHWRAEKGAALYEAQLEDTSSSPGEWTLLSSTLQSback to top mRNA from alignment at Contig_63:618787..622913- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_10320 ID=mRNA_10320|Name=jgi.p|Trimin1|82442|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4127bp|location=Sequence derived from alignment at Contig_63:618787..622913- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_63:618787..622913- >mRNA_10320 ID=mRNA_10320|Name=jgi.p|Trimin1|82442|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1077bp|location=Sequence derived from alignment at Contig_63:618787..622913- (Tribonema minus UTEX_B_3156 )back to top |