mRNA_10320 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|82442
Unique NamemRNA_10320
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|82442 vs. uniprot
Match: A0A835YMB1_9STRA (Thioredoxin-like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMB1_9STRA)

HSP 1 Score: 655 bits (1691), Expect = 1.410e-235
Identity = 358/358 (100.00%), Postives = 358/358 (100.00%), Query Frame = 3
Query:   30 MKPPVLLDAGADTLSVHWRAEKGAALYEAQLEDTSSSPGEWTLLSSTLQSTRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQESPQMVRSEAEALTVQWKAVDACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQLLPASLVNAKGETIAASSLAGKVAAIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDPARQAIASALSVNSVPRLMVFSPTGAVLSENAVGVGLPQLKLWCGGNSAQKPAXXXXXXXXXXXXXXXXCC 1103
            MKPPVLLDAGADTLSVHWRAEKGAALYEAQLEDTSSSPGEWTLLSSTLQSTRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQESPQMVRSEAEALTVQWKAVDACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQLLPASLVNAKGETIAASSLAGKVAAIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDPARQAIASALSVNSVPRLMVFSPTGAVLSENAVGVGLPQLKLWCGGNSAQKPAXXXXXXXXXXXXXXXXCC
Sbjct:    1 MKPPVLLDAGADTLSVHWRAEKGAALYEAQLEDTSSSPGEWTLLSSTLQSTRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQESPQMVRSEAEALTVQWKAVDACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQLLPASLVNAKGETIAASSLAGKVAAIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDPARQAIASALSVNSVPRLMVFSPTGAVLSENAVGVGLPQLKLWCGGNSAQKPAXXXXXXXXXXXXXXXXCC 358          
BLAST of jgi.p|Trimin1|82442 vs. uniprot
Match: A0A6S9IW74_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IW74_HETAK)

HSP 1 Score: 233 bits (593), Expect = 1.070e-69
Identity = 127/286 (44.41%), Postives = 177/286 (61.89%), Query Frame = 3
Query:  150 WTLLSSTLQSTRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQESPQMVRSEAEALTVQWKAVDACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQLLPASLVNAKGETIAASSLAGKVAAIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDPARQAIASALSVNSVPRLMVFSPTGAVLSENAVGVGLPQ 1007
            WT LSS+ +  +++KKNL PG+ Y FR R+ D LG +   S +S+   TL  G NR++  PQ+   E  A+ + W+ V+   +YELQ++   +     W TV+  ++ P  KKKGL A T+Y+FRVR +F+  D     WAFSPPS  +SP  L   L  +LP +L+N + + ++  +LAGKV AIY SAHWCGPCR++TPQLA  Y   + A  P EVVFVS D       SY + MPW AVP+ D  R+ I S   V+ +PRLMV  P GA+++ENAVG+ L +
Sbjct:   17 WTTLSSSFKGNKVKKKNLEPGKAYTFRYRSRDRLGWN-LFSPSSKPSWTLQSGQNRLENGPQIHAVETGAVMLGWQCVEGASSYELQIS---DAAYPVWQTVSTNIQHPAVKKKGLDANTKYIFRVRPLFAHEDSAS--WAFSPPSSEISPPILSQLLSSMLPVNLINNQNQAVSQGALAGKVVAIYFSAHWCGPCRKFTPQLATFYNQMKAARRPFEVVFVSCDGDAGSMMSYFSEMPWLAVPFDDDKREQIQSDYQVSGIPRLMVVGPGGAIVAENAVGMPLSE 296          
BLAST of jgi.p|Trimin1|82442 vs. uniprot
Match: L1IDF0_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IDF0_GUITC)

HSP 1 Score: 206 bits (525), Expect = 1.310e-59
Identity = 130/331 (39.27%), Postives = 180/331 (54.38%), Query Frame = 3
Query:   42 VLLDAGADTLSVHWRAEKGAALYEAQLEDTSSSPGEWTLLSSTLQSTRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQESPQMVRSEAEALTVQWKAVDACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQLLPASLVNAKGETIAASSLAGKVAAIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDPARQAIASALSVNSVPRLMVFSPTGAVLSENAVGVGLPQLKL--WCGG 1028
            V+ D  A+ +++ W     A  YE Q++      G++T +S +L ST +RKKNL P   Y  RVR  D+L  SG     S  F TL+    +  E PQ+V  + E++T+QW     CE+Y +++      +   W T++  +K  I +KK L     Y FRV+   + G      W FSPPS+    ADLP  L  LL  +LV+A+G +   SSLAG V A+Y SA WCGPCRQ+TPQL+Q Y   +Q   P EVVF+S DR    F++Y   MPW AVP+    R+    AL V  +P+L++    G VL +NAVG  L   KL  W  G
Sbjct:    5 VVHDVEAEAVTLSWSKVPNAVKYEVQIKQEEG--GDFTTISDSLTSTLVRKKNLKPNTEYFARVRHRDALDWSGFCEPVS--FHTLAGQDVKRLEHPQVVSRDGESITLQWPTAPDCESYTVEIR---SDKDPTWRTISDHLKNNIVRKKNLEKHVMYYFRVKPNLAEGSGS---WFFSPPSEGAMLADLPPFLSNLLSPTLVDAQGTSKPVSSLAGCVVALYCSASWCGPCRQFTPQLSQFYTQMKQLGKPFEVVFLSCDRDSKSFTNYFGHMPWLAVPFDSDKRENALGALQVEGIPKLVIVGANGMVLQDNAVGTPLNAQKLDSWIAG 325          
BLAST of jgi.p|Trimin1|82442 vs. uniprot
Match: A0A7S0E8P9_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E8P9_9CRYP)

HSP 1 Score: 199 bits (507), Expect = 3.160e-57
Identity = 132/315 (41.90%), Postives = 175/315 (55.56%), Query Frame = 3
Query:   99 AALYEAQLEDTSSSPGEWTLLSSTLQSTRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQESPQMVRSEAEALTVQWKAVDACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRH---VFSGGDDQQQEWAFSPPSDPLSPADLPARLQQLLPASLVNAKGETIAASSLAGKVAAIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDPARQAIASALSVNSVPRLMVFSPTGAVLSENAVGVGLPQLKL--WCGG 1028
            A  YE Q++      G++T +S +L ST +RKKNL P   Y  RVR  D+L  S    E     T      NR+ E+P++V  +AE+LTVQW  V  CE+Y ++M    + E L W  ++  +K  I +KK L     Y FRV+    V SG       W FSPPS+  + ADLP  L  LL  +L++A+G +   SSLAG V A+Y SA WCGPCRQ+TPQL+Q Y   +Q   P EVVF+S DR    FS+Y   MPW AVP+    R+    AL V  +P+L++    G VL +NAVG  L   KL  W  G
Sbjct:    1 AVKYEVQIKQEDG--GDFTTISDSLTSTLVRKKNLKPNTQYFARVRHRDALDWSN-FCEPVPFQTLTGAEVNRL-ENPKIVSKDAESLTVQWPTVPDCESYTVEMRS--DKEPL-WRPISDHLKNNIVRKKNLDKHVMYYFRVKPNLGVESGS------WFFSPPSEGATLADLPPFLSNLLTPTLIDAQGTSKPVSSLAGSVVALYCSASWCGPCRQFTPQLSQFYTQMKQLGKPFEVVFLSCDRDSKSFSNYFGHMPWLAVPFDSDKRENALGALQVEGIPKLVIVGANGMVLQDNAVGTPLNAQKLDSWIAG 302          
BLAST of jgi.p|Trimin1|82442 vs. uniprot
Match: A0A7S1IM31_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IM31_9EUGL)

HSP 1 Score: 194 bits (494), Expect = 6.310e-55
Identity = 127/323 (39.32%), Postives = 177/323 (54.80%), Query Frame = 3
Query:   30 MKPPVLLDAGADTLSVHWRAEKGAALYEAQLEDTSSSPGEWTLLSSTLQSTRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQESPQMVRSEAEALTVQWKAVDACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQLLPA--SLVNAKGETIAASSLAGKVAAIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDP-ARQAIASALSVNSVPRLMVFSPTGAVLSENAV 989
            M+ P   +A    L++ W     A  YE Q++    +  +W  ++S   S  LRKKNL+P  TY+FR+RA DS G  G  S  +    TL EGT ++ E+PQ+  ++  +LT++W+AV     YE+Q     + E   WTT  A++ +   +KK L  R  Y++RV+   S  +    +WAFS    P     + +   QL     SLV   G ++  ++LAGKV AIY SA WC PC+Q+TPQLA  Y A +      EVVFVS+DR    +  YL TMPW AV Y D   RQAI    +V  +PRL+VF  TG +L ENAV
Sbjct:    1 MEAPTFYEAEVSCLTIGWLPVVNATKYEVQIKGGPDT--DWRTITSEFTSCLLRKKNLLPATTYQFRLRAQDSAG-FGEWSAPTTDLQTLPEGTQQL-EAPQLQSADGVSLTIKWEAVPDATGYEVQFREQSKPE---WTTAIASISSTAMRKKNLEERKAYLWRVKP--SAPEAVSTKWAFSRIGGPFQVPTVSSTCVQLFGTGESLVTNMGHSVPLNTLAGKVVAIYCSASWCPPCKQFTPQLAHFYNAVKNEGHGFEVVFVSMDRDRASWLGYLNTMPWIAVDYDDAQTRQAIPQRYNVQGIPRLIVFGATGQMLEENAV 314          
BLAST of jgi.p|Trimin1|82442 vs. uniprot
Match: A0A7S0QF75_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QF75_9CRYP)

HSP 1 Score: 183 bits (464), Expect = 4.150e-50
Identity = 125/353 (35.41%), Postives = 180/353 (50.99%), Query Frame = 3
Query:   42 VLLDAGADTLSVHWRAEKGAALYEAQLEDTSSSPGE------------------WTLLSSTLQSTRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQESPQMVRSEAEALTVQWKAVDACEAYELQM--ALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQLLPASLVNAKGETIAASSLAGKVAAIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDPARQAIASALSVNSVPRLMVFSPTGAVLSENAVG--VGLPQLKLWCGGNS 1034
            V+ D  A + ++ W    GA  YE QL + ++ P E                  W  +S TL+S+ ++KKNL+PG  +  RVR  DS+  +         F T+ E  +R+ E+P +  S+++++TVQW  V+   +Y LQ   ++  +G    W  + A +   I +KK L +   Y FRV   F+   D+   WAFSPPSD  S    P   + LL   LV+A G  I A SLAG    IYASA WCGPCRQ+TP L   Y  AR      +++FVS DR +  F SY + MPW A+P+   AR+     + V  +PRLM+ +  G     NAV   + L QL  W  G++
Sbjct:    6 VIQDVDASSATLAWTCCHGALRYELQLVEVTAEPKENCSKSDEVPPDCELPNEMWKTVSETLKSSLIKKKNLMPGTWFAARVRYRDSIDWNSFS--LPVFFRTIQETDHRM-EAPSLHSSDSQSITVQWIPVEHANSYALQYRNSISSDGHPSDWVPLPA-ITGNIIRKKNLNSDGVYCFRVIPNFNEVSDR---WAFSPPSDGFSVCRFPLYTKNLLGMKLVDAAGNEILAESLAGHTLGIYASASWCGPCRQFTPSLISFYNEARANGRKFQIIFVSCDRDKQSFDSYFSKMPWLAIPFESEARENALKEMQVQGIPRLMILNAEGRTAEVNAVQSRLTLGQLDAWSSGST 351          
BLAST of jgi.p|Trimin1|82442 vs. uniprot
Match: A0A7S4UKE2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UKE2_9STRA)

HSP 1 Score: 172 bits (435), Expect = 5.050e-46
Identity = 125/336 (37.20%), Postives = 177/336 (52.68%), Query Frame = 3
Query:   42 VLLDAGADTLSVHWRAEKGAALYEAQLED-TSSSPGEWTLLSSTLQSTRLRKKNLVPGR-TYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQESPQMVRSEAEALTVQWKAVDACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQLLP----ASLVNAKGETIAAS-----SLAGKVAAIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDP-----ARQAIASALSVNSVPRLMVFSPTGAVLSENAVGVGL 1001
            VL+D+   +L++ W     A  Y  +  D T++    +T+LS  L ST+ RK+NL P    + FRVRA D +   G +  + E      +  N   E+P           VQWK       +ELQM   V+G A AW T+A ++K   A+K+ L +   Y FRVR   +  D       FSPPS+ +    +   L +L P     +++  K  T   S     +LAGKV  +Y SAHWCGPCRQ+TPQLA  Y A ++++  VEVVFVSLD  E  F+SY  +MPW AVP+ +       R+ +    SVN +PRL+V +  G+V+ ENAVG  L
Sbjct:   16 VLIDSDTTSLTISWPEVPRARRYALEYTDATTNETNAYTVLSDKLTSTQARKRNLDPKHGPFTFRVRARDEVDFIGEMMTSDELNLLSEDEANSRMEAPLATAVGNCCAHVQWKKAHD-NTFELQMRE-VQGGA-AWQTIATSLKNTEARKRNLTSSALYQFRVRPNTT--DSSDGNIPFSPPSNQVQALSISPGLARLFPRGGDGAMLLTKNNTAMTSMKLADALAGKVTMLYFSAHWCGPCRQFTPQLANYYNALKKSSNNVEVVFVSLDHDESSFNSYYKSMPWLAVPFDEDDHGNNVREDLQGRFSVNGIPRLVVLNAQGSVVEENAVGKDL 346          
BLAST of jgi.p|Trimin1|82442 vs. uniprot
Match: K8YS41_NANGC (Tsa family domain-containing protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YS41_NANGC)

HSP 1 Score: 170 bits (430), Expect = 9.130e-45
Identity = 118/316 (37.34%), Postives = 163/316 (51.58%), Query Frame = 3
Query:   63 DTLSVHWRAEKGAALYEAQLEDTSSSPGEWTLLSSTLQSTRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQESPQMVRSEAEALTVQWKAVDACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQLLPASLVNAKGET----IAASSLAGKVAAIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYS--DPARQAIASALSVNSVPRLMVFSPTGAVLSENAVG 992
            D+ +  W A +  A+ E  L D   + GEW  LS++L+S  +RK+NL     YRFRVR  D +       + S    TLS    R+      V   A  +T+ W+ V+   AY + M    E  A+ W  V   V     KKK L A   Y FRVR V   G+  +  W +SP S+ +SP  LP  L+++  + L    G+     I   SLAG V  +YASAHWC PCRQ+TPQLA  Y   + A    E+VFVSLD+ +  F  Y  +MPW A+P+   +  R+A+     + SVPRL++F   G +L  NAVG
Sbjct:   74 DSQAEDWNAAR--AMEEPGLTDHGDAVGEWCTLSASLKSNMVRKRNLSHSTPYRFRVRVRDKV--DWLPFQTSSLLHTLSTFVQRMAAPRGEVGGAAGCVTLSWEPVEEAAAYAVHMR---EQGAVRWKEVGR-VGGTSVKKKNLEAGKAYHFRVRPV---GERVEDVWVWSPWSEAMSPPSLPPVLRRMFGSRLAVEVGKEGKKEIGVESLAGSVVGVYASAHWCAPCRQFTPQLANFYRGLQGAGKAFEIVFVSLDQEKEAFELYFESMPWLAIPWEGGEGEREALMRMYQITSVPRLLIFGRDGELLENNAVG 378          
BLAST of jgi.p|Trimin1|82442 vs. uniprot
Match: A0A7S4K6K6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K6K6_9STRA)

HSP 1 Score: 165 bits (418), Expect = 1.240e-43
Identity = 131/340 (38.53%), Postives = 176/340 (51.76%), Query Frame = 3
Query:   42 VLLDAGADTLSVHWRAEKGAALYEAQL--EDTSSSPGEWTLLSSTLQSTRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQ-ESPQMVRSEAEALTVQWKAVD-------ACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQL---LPASLVNAKGETIAA---SSLAGKVAAI-YASAHWCGPCRQYTPQLAQLYAAARQ--ATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDPARQAIASALSVNSVPRLMVFSP-TGAVLSENAVGVGL 1001
            VLLDA  D+L+V W +  GA  Y  Q   E  S   G++  LS  L+ST+ RK+NL P   + FR R+  S G  G      E+F  L+     ++ E+P       +A  V+WKA         + + YELQM     G    W TVA  +     +KK L +R  Y FRVR V +  D +    AFSPPSDPL    L   +++L   L    +   G T       +LAGK   + YASAHWCGPCRQ+TPQL   Y + ++  A   V+VVF+S D  E  F SY +TMPW AVPY   AR+ + + + V  +PRL V    TG ++ +NAVG  L
Sbjct:    6 VLLDATDDSLTVSWPSVAGADRYVLQYRRESDSEEGGDYETLSENLKSTQARKRNLPPESAFSFRARS--SSGADGEWIGHEESFRLLTAAEQALRMEAPTATADGNQAAVVRWKAPTGGAEAGTSVDGYELQMRENDGGRG--WCTVAPRLGGIEVRKKNLISRLGYQFRVRPV-NPSDGRN---AFSPPSDPLVGRTLSEGMRRLFSDLEDGALLRGGTTTNIPLDDALAGKEFVLFYASAHWCGPCRQFTPQLTNWYKSVKRQPAGTGVDVVFLSADHDEGSFKSYYSTMPWLAVPYDSDAREGLMAHIRVQGIPRLCVLDGRTGRIIEDNAVGKSL 337          
BLAST of jgi.p|Trimin1|82442 vs. uniprot
Match: A0A7S1D7H8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D7H8_CYCTE)

HSP 1 Score: 161 bits (408), Expect = 4.220e-42
Identity = 124/329 (37.69%), Postives = 174/329 (52.89%), Query Frame = 3
Query:   45 LLDAGADTLSVHWRAEKGAALYEAQLEDTSSSPGE----WTLLSSTLQSTRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEG--TNRIQESPQMVRSEAEALTVQWKAVDACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQLLPA----SLVNAKGETIA-ASSLAGK-VAAIYASAHWCGPCRQYTPQLAQLYAAARQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDPARQAIASALSVNSVPRLMVFSP-TGAVLSENAVG 992
            L+DA + +L+V W A   A+ Y  +         +    +  LSS L ST+ RK+NL     Y FRVRAI    +        EAF  LSE   +NR+     ++    +AL V+WK  +  + YELQM     G    W+T+AA++     +KK L ++  Y FRVR    GG D     AFSPPS P     L   ++QL  +     L+    +++  A +L GK    +YASAHWCGPCRQ+TPQL++ Y +  Q    VEVVF+S D  E  F SY  +MPW AVP+ D AR+ +   + V  +PRL+V    TG ++ +NAVG
Sbjct:    9 LIDATSSSLTVSWPAVADASHYVLEYRKALCGGDDEDELFETLSSKLTSTQARKRNLDFFGGYFFRVRAIKGDNDVKNWVTHEEAFHLLSEADESNRMDPPEAVLAGTNQALLVKWKKHEGADGYELQMRENDGGGK--WSTIAASLSGTEVRKKNLTSKLGYQFRVRPA--GGVDA----AFSPPSSPAVALGLSNGMKQLFSSLGEGKLLQDPSKSLPLADALGGKEFVLLYASAHWCGPCRQFTPQLSKWYQSLPQKN--VEVVFLSCDHDENGFESYFKSMPWLAVPFDDDARENLLGYIRVKGIPRLVVLDGRTGRIIVDNAVG 327          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|82442 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YMB1_9STRA1.410e-235100.00Thioredoxin-like-domain-containing protein n=1 Tax... [more]
A0A6S9IW74_HETAK1.070e-6944.41Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
L1IDF0_GUITC1.310e-5939.27Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A7S0E8P9_9CRYP3.160e-5741.90Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S1IM31_9EUGL6.310e-5539.32Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S0QF75_9CRYP4.150e-5035.41Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7S4UKE2_9STRA5.050e-4637.20Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
K8YS41_NANGC9.130e-4537.34Tsa family domain-containing protein n=2 Tax=Nanno... [more]
A0A7S4K6K6_9STRA1.240e-4338.53Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1D7H8_CYCTE4.220e-4237.69Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_63contigContig_63:618787..622913 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|82442|CE82441_148
BRITEko00000,ko01000,ko01009
KEGG koko:K17609
EC1.8.1.8
Descriptioncellular oxidant detoxification
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsKOG2501@1|root,KOG2501@2759|Eukaryota
Evalue6.04e-62
Seed ortholog2880.D7FT29
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-04_002600.1
TranscriptId82764
TrackFilteredModels1
ProteinId82442
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|82442gene_10320Tribonema minus UTEX_B_3156 geneContig_63 618787..622913 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|82442Trimin1|82442|CE82441_148Tribonema minus UTEX_B_3156 polypeptideContig_63 618983..622884 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_10320_3exon_10320_3Tribonema minus UTEX_B_3156 exonContig_63 618787..619364 -
exon_10320_2exon_10320_2Tribonema minus UTEX_B_3156 exonContig_63 620490..620721 -
exon_10320_1exon_10320_1Tribonema minus UTEX_B_3156 exonContig_63 622422..622913 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_10320UTR3_10320Tribonema minus UTEX_B_3156 three_prime_UTRContig_63 618787..618982 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_10320CDS_10320Tribonema minus UTEX_B_3156 CDSContig_63 622422..622884 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_10320UTR5_10320Tribonema minus UTEX_B_3156 five_prime_UTRContig_63 622885..622913 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_10320 ID=mRNA_10320|Name=jgi.p|Trimin1|82442|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1302bp|location=Sequence derived from alignment at Contig_63:618787..622913- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CGGCAACTTCTCCGCAAGGCTCGCTAGCAATGAAGCCACCTGTGCTGCTG
GACGCAGGCGCAGACACGCTGTCCGTGCACTGGAGAGCTGAGAAAGGTGC
AGCTCTTTACGAGGCCCAGCTCGAGGATACGTCTTCGAGCCCAGGCGAAT
GGACGCTTCTCTCCTCCACGCTACAGTCCACACGGCTGCGCAAGAAGAAC
TTGGTGCCAGGAAGAACCTACAGATTCCGAGTCAGAGCCATAGACAGTCT
GGGAGAATCTGGCCGGCTATCGGAGGCTTCTGAAGCCTTCACGACATTGA
GCGAGGGCACCAACAGAATCCAAGAAAGCCCACAGATGGTCAGGAGCGAG
GCGGAGGCGCTGACTGTGCAGTGGAAAGCCGTCGATGCATGTGAGGCCTA
TGAGCTGCAGATGGCGCTGTGGGTGGAAGGCGAGGCGCTGGCCTGGACCA
CGGTGGCGGCAGCGGTCAAGGCACCAATCGCCAAGAAGAAAGGGTTGGCA
GCGCGCACGCGCTACGTGTTCAGGGTCCGGCACGTGTTCTCTGGTGGTGA
TGATCAGCAGCAAGAGTGGGCCTTTTCACCCCCCTCAGACCCCCTGTCTC
CGGCTGATCTGCCCGCACGACTACAGCAGCTGCTGCCTGCGAGCCTGGTG
AACGCAAAGGGGGAGACGATTGCTGCTAGCAGCTTGGCAGGGAAGGTCGC
TGCCATCTATGCCAGTGCACACTGGTGCGGCCCCTGCCGACAGTACACGC
CGCAGCTGGCGCAGCTCTACGCCGCCGCGCGACAGGCGACTCTCCCAGTT
GAAGTTGTATTCGTCTCCCTGGACCGCTCCGAGCCCGACTTCAGCTCGTA
CCTCGCCACCATGCCGTGGCCGGCAGTGCCGTATTCAGACCCTGCTCGGC
AAGCCATTGCCTCTGCTCTCAGCGTCAACTCGGTGCCGCGGCTCATGGTG
TTTTCACCGACAGGCGCGGTGCTGTCTGAGAACGCCGTCGGGGTAGGCCT
GCCGCAGTTGAAGTTGTGGTGCGGGGGCAACAGTGCTCAGAAGCCTGCAG
CAGCAGCGGCAGTGGCGGGCGGCAGCTGCTGCAGACGCGGCGGGGGGTGC
TGCTAGCCCTAGCCCTACTTCCAGCCACCAGGCCTGGCATGCTGGCAGTG
AGTGGTGTTAACAATTGGCAATGTACATATAGGTATCAATGGCATGGTGC
TGCTGCAGCCGTGTACAATCCCGCTGCAGGGCAAGCTTCTGCTATGAGCT
GGCAGTTGTTTGGCTGAAACCCTCTGCAACAAATGTACAAACTGGTGATG
GC
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protein sequence of jgi.p|Trimin1|82442

>Trimin1|82442|CE82441_148 ID=Trimin1|82442|CE82441_148|Name=jgi.p|Trimin1|82442|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=359bp
MKPPVLLDAGADTLSVHWRAEKGAALYEAQLEDTSSSPGEWTLLSSTLQS
TRLRKKNLVPGRTYRFRVRAIDSLGESGRLSEASEAFTTLSEGTNRIQES
PQMVRSEAEALTVQWKAVDACEAYELQMALWVEGEALAWTTVAAAVKAPI
AKKKGLAARTRYVFRVRHVFSGGDDQQQEWAFSPPSDPLSPADLPARLQQ
LLPASLVNAKGETIAASSLAGKVAAIYASAHWCGPCRQYTPQLAQLYAAA
RQATLPVEVVFVSLDRSEPDFSSYLATMPWPAVPYSDPARQAIASALSVN
SVPRLMVFSPTGAVLSENAVGVGLPQLKLWCGGNSAQKPAAAAAVAGGSC
CRRGGGCC*
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mRNA from alignment at Contig_63:618787..622913-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_10320 ID=mRNA_10320|Name=jgi.p|Trimin1|82442|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4127bp|location=Sequence derived from alignment at Contig_63:618787..622913- (Tribonema minus UTEX_B_3156 )
CGGCAACTTCTCCGCAAGGCTCGCTAGCAATGAAGCCACCTGTGCTGCTG GACGCAGGCGCAGACACGCTGTCCGTGCACTGGAGAGCTGAGAAAGGTGC AGCTCTTTACGAGGCCCAGCTCGAGGATACGTCTTCGAGCCCAGGCGAAT GGACGCTTCTCTCCTCCACGCTACAGTCCACACGGCTGCGCAAGAAGAAC TTGGTGCCAGGAAGAACCTACAGATTCCGAGTCAGAGCCATAGACAGTCT GGGAGAATCTGGCCGGCTATCGGAGGCTTCTGAAGCCTTCACGACATTGA GCGAGGGCACCAACAGAATCCAAGAAAGCCCACAGATGGTCAGGAGCGAG GCGGAGGCGCTGACTGTGCAGTGGAAAGCCGTCGATGCATGTGAGGCCTA TGAGCTGCAGATGGCGCTGTGGGTGGAAGGCGAGGCGCTGGCCTGGACCA CGGTGGCGGCAGCGGTCAAGGCACCAATCGCCAAGAAGAAAGGTGGGCCA GTCGATAAAATGCAGAGGCAATGTGCACCGTCAGACACGTCTCATATGAC CAATGTTTGCTGAAATATTTGAACACCGGGTGTGCGGTATGATCATGTTG CAGTTGAAGTTGCCGGTTTCCACCAACATGGCATCGTGCTTAGCTTTGAT GGCAAGCTCTATTTCTGTGTGGGCTTCCTGCATCTTTAATTGCAGAGCCA CTGGTAGAATCATATTGAGCAATTGATGAGAGGTACGTGCACACAACTTG TGCAAACGTCGCTTTTCAGTAGAGTGTGATAACGAATTATAAAACAACGC GTTGTTTTCGTTAGTTAGGGTTCTTCGTTATATAAAGAACAACTAGCGCG AGCGCTCGACGCAAATTCGTTGTTTCGCATTTTTGTGCAAATGCTCTGCA GCTCGTTTGCACGAGCTCTGCTGCACCGTGTGACGACGATGGCGGCACGT ATGAGATGCGCTGGTGTGCCAAACAGCGTACCGCCACCGCTGCCTGACCC TGTCGCGAGTGCTGCTATGCTTGCGCAAGGCATGACCAAACAGCACAAAG ACAAGACTTGCACGGGGGGGCACGAGAGCCGAGTGTTTGCACGGGGGCAC ACGTCGAGAGCTGGCTTACACATTCAAGTGCTTGCTTTCATACTAGTCGG CCGCCCACTGAGCTCCTCATCTTGACACACACACACTGCACACCAATGTT TCCAAGTTCAAGTTCTGGTTGAAGTTCAACATGAAGTTGTTTTGTTTGCG ACCTCTTTGGGGTATGATTTATGCAAAGCTTAGCATTGTAGCAACTGCTT TAGAGCTAGAGTAACTCGCAACAGGGCGACTGAGATGCTTTGCAAGTCCG AGAGGGGAAAGTAGCTGCTCTCCAACGCTACCTCATCCCAGGATGGTAGG CATTACTGGTAGTATACAGCAGCAACGATAAAATAACGAATAATATATTG AATAACGAATAACTAACGAATAACTAACGAATGGTTGAGTAACAATACCG AATAACCAACTATAGCAATAGTTGTCACACTCTACTTTTCAGCACAACTG GGGGGTGACATGTCCAAATCTGGCACAACTGTCGGACACCATCAATAATT GGACGTCATTAAGGGACCAGCCTTCTTGAATTCAGCCGCTCCAACTATGA CGATTCCTTAGCCGGCACTGCAGTATGATGTTGTGGTGGGGTCTGCGTAT GTTCTTTGAAACATACAATGCTGCATACATGTTGGCTTTACAGCTGTAGA ATCAAGCCTGGAACATGTAGTTACATTTTCATCAAACAGCTGCTGAACCA AGTTTCGCCATCAACTGCCGTTATCACAGCATTACCACTGCTACCGGTAT CAGGTGTTGAACAAGCTATGCTACTGTGCTGCCATACGCGGCCCTCCTTT CTGTGTACACCAACAACGCACTTTGTACACCGGTTTGCAAGTCGATGTCA CCTACGCGCCACCCGATCTGCCTGCCTTGCAAAAGTAGCAATGCAACTCA GACTCAGCCACCATAGTCCAGTATCAGACGCTTACATAGTCCAGTAATGA ACCGTATGCGTGCTGCAGCAATGACATCATGGGTCAGCACCAGCAGCATC GCCTGCTTCTTTCTCTGCATGTCGACTGTGCTTTTAGTCACGCACTGTTT CACCAATCTTGTCCCTTCCTGACATTGCTTATTATGATGCAGGGTTGGCA GCGCGCACGCGCTACGTGTTCAGGGTCCGGCACGTGTTCTCTGGTGGTGA TGATCAGCAGCAAGAGTGGGCCTTTTCACCCCCCTCAGACCCCCTGTCTC CGGCTGATCTGCCCGCACGACTACAGCAGCTGCTGCCTGCGAGCCTGGTG AACGCAAAGGGGGAGACGATTGCTGCTAGCAGCTTGGCAGGGAAGGTCGC TGCCATCTATGCCAGTGCACACTGGTGAGTGCCGTGAGCCTGCCTTGTGA CAGTGCTCAAATTGATAGTACTTCATGTAGGTCGCCTCAGTGCGGTTGGA CGGTTCAGCTTTGCGAATTTGAACTGCAGTTCAAATCACTTGTGCATCGT GTGTGGGTAGCGTTGACTGGTGAGTGATGGCAGGCCTGTGATGGCAGTGC TCAATTCAACAGTGAATGACTTTGAAGCAGACAAGGCCCGCTTCATCTGC ACGAACATGGGCTCCATTTACTAGTTTGTTTGCGTGTAGTGCGTCCGCAT TTGTGCAGCCTCGTGCATATATACACTGAAGGATGCACAGAATGCGTGGT TGAAAAAAAGTGTGCCGTGTCGGTCTTTCAGGTGTTCATATGCACAGTAT ACTTGAAAGTCCATGTACACCAACGCCCCTATTACAACAAGCAGCAATAT GGTACTGTGCTTCACGGTGCCCGATCGGTTGTGTGTGGTGGACGCTGCCT AACCCTAACCCTAGAAAGGTGGTTGAAAGCATGAAAGCTGTTGCCCACTC TATCGCGCATAATGTCGTGAAGAACACAACAACAAAGCATTGACGTCTTA AAGACAACAAGAACAGATGCTGCAAAATGGGTTCATCAAGTGATTGGATA GACGTGAGTCAACGGAGACAAAGTTGCTTGCTTCCCATCATGTCTTGTAT CTCATCATTGAATGCCTCAATTCTTGCCGAAGTGCATGCTCCCTAGTCTA GTGTAGTCTCTTCAGATATCACATTTGAGTAGCATATACATATACATACA TTGAAATTAATTTAAAATGAGCACACACGCGCAGCAGCAATTCAACAATT TAGATAAATGTTTGTTACGCTCTTCTGCATCCATGCTGGTGACACACAAC AGTGCGCACACAGAAGCGACTACTGGCCATCACAATGCTAGACCAAACCA TTCAATGTGCTGTGGTCGGGGTTGAAATCCACCCCCTCTTTTTCAACACG CATGTTGATGGCATTGGTCAATCCACATTAAGATGAGGAGTATGTATCAC TGTATCACCGCGCCACCGACCTGCAATCCACCTTTCTTGAGCCGTTGTGA CATCCTGGCATCACCTCATGCTGTCCTCCTCCTGTGCTCACGTGAGCAGG TGCGGCCCCTGCCGACAGTACACGCCGCAGCTGGCGCAGCTCTACGCCGC CGCGCGACAGGCGACTCTCCCAGTTGAAGTTGTATTCGTCTCCCTGGACC GCTCCGAGCCCGACTTCAGCTCGTACCTCGCCACCATGCCGTGGCCGGCA GTGCCGTATTCAGACCCTGCTCGGCAAGCCATTGCCTCTGCTCTCAGCGT CAACTCGGTGCCGCGGCTCATGGTGTTTTCACCGACAGGCGCGGTGCTGT CTGAGAACGCCGTCGGGGTAGGCCTGCCGCAGTTGAAGTTGTGGTGCGGG GGCAACAGTGCTCAGAAGCCTGCAGCAGCAGCGGCAGTGGCGGGCGGCAG CTGCTGCAGACGCGGCGGGGGGTGCTGCTAGCCCTAGCCCTACTTCCAGC CACCAGGCCTGGCATGCTGGCAGTGAGTGGTGTTAACAATTGGCAATGTA CATATAGGTATCAATGGCATGGTGCTGCTGCAGCCGTGTACAATCCCGCT GCAGGGCAAGCTTCTGCTATGAGCTGGCAGTTGTTTGGCTGAAACCCTCT GCAACAAATGTACAAACTGGTGATGGC
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Coding sequence (CDS) from alignment at Contig_63:618787..622913-

>mRNA_10320 ID=mRNA_10320|Name=jgi.p|Trimin1|82442|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1077bp|location=Sequence derived from alignment at Contig_63:618787..622913- (Tribonema minus UTEX_B_3156 )
ATGAAGCCACCTGTGCTGCTGGACGCAGGCGCAGACACGCTGTCCGTGCA
CTGGAGAGCTGAGAAAGGTGCAGCTCTTTACGAGGCCCAGCTCGAGGATA
CGTCTTCGAGCCCAGGCGAATGGACGCTTCTCTCCTCCACGCTACAGTCC
ACACGGCTGCGCAAGAAGAACTTGGTGCCAGGAAGAACCTACAGATTCCG
AGTCAGAGCCATAGACAGTCTGGGAGAATCTGGCCGGCTATCGGAGGCTT
CTGAAGCCTTCACGACATTGAGCGAGGGCACCAACAGAATCCAAGAAAGC
CCACAGATGGTCAGGAGCGAGGCGGAGGCGCTGACTGTGCAGTGGAAAGC
CGTCGATGCATGTGAGGCCTATGAGCTGCAGATGGCGCTGTGGGTGGAAG
GCGAGGCGCTGGCCTGGACCACGGTGGCGGCAGCGGTCAAGGCACCAATC
GCCAAGAAGAAAGGGTTGGCAGCGCGCACGCGCTACGTGTTCAGGGTCCG
GCACGTGTTCTCTGGTGGTGATGATCAGCAGCAAGAGTGGGCCTTTTCAC
CCCCCTCAGACCCCCTGTCTCCGGCTGATCTGCCCGCACGACTACAGCAG
CTGCTGCCTGCGAGCCTGGTGAACGCAAAGGGGGAGACGATTGCTGCTAG
CAGCTTGGCAGGGAAGGTCGCTGCCATCTATGCCAGTGCACACTGGTGCG
GCCCCTGCCGACAGTACACGCCGCAGCTGGCGCAGCTCTACGCCGCCGCG
CGACAGGCGACTCTCCCAGTTGAAGTTGTATTCGTCTCCCTGGACCGCTC
CGAGCCCGACTTCAGCTCGTACCTCGCCACCATGCCGTGGCCGGCAGTGC
CGTATTCAGACCCTGCTCGGCAAGCCATTGCCTCTGCTCTCAGCGTCAAC
TCGGTGCCGCGGCTCATGGTGTTTTCACCGACAGGCGCGGTGCTGTCTGA
GAACGCCGTCGGGGTAGGCCTGCCGCAGTTGAAGTTGTGGTGCGGGGGCA
ACAGTGCTCAGAAGCCTGCAGCAGCAGCGGCAGTGGCGGGCGGCAGCTGC
TGCAGACGCGGCGGGGGGTGCTGCTAG
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