mRNA_10244 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|351981
Unique NamemRNA_10244
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|351981 vs. uniprot
Match: A0A835ZG17_9STRA (Uncharacterized protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG17_9STRA)

HSP 1 Score: 791 bits (2042), Expect = 1.620e-288
Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 1
Query:    1 MTSLALAELLRKDSLRDSKGPGVTDCLQQHHPDICHDDTLCVRRTWRKTCGDDMVKNSSTYRAGLNKVVERAEQMARSATGREERAWAGRVKERVIAFDELSICNQRNLKASGRLEQTAARSYTGSVVMDRMLADLVRVPESAELPGPTAGTAAVASGSASAGGDPATAQQLHTQGNGCAADRLSAAARALMDDMLATVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLFKASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPFTAKFLAACNVAYADALPRTPAPLPVQPDTADVTAAESEENEIEDVKARAGGSCAVHADTI 1236
            MTSLALAELLRKDSLRDSKGPGVTDCLQQHHPDICHDDTLCVRRTWRKTCGDDMVKNSSTYRAGLNKVVERAEQMARSATGREERAWAGRVKERVIAFDELSICNQRNLKASGRLEQTAARSYTGSVVMDRMLADLVRVPESAELPGPTAGTAAVASGSASAGGDPATAQQLHTQGNGCAADRLSAAARALMDDMLATVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLFKASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPFTAKFLAACNVAYADALPRTPAPLPVQPDTADVTAAESEENEIEDVKARAGGSCAVHADTI
Sbjct:    1 MTSLALAELLRKDSLRDSKGPGVTDCLQQHHPDICHDDTLCVRRTWRKTCGDDMVKNSSTYRAGLNKVVERAEQMARSATGREERAWAGRVKERVIAFDELSICNQRNLKASGRLEQTAARSYTGSVVMDRMLADLVRVPESAELPGPTAGTAAVASGSASAGGDPATAQQLHTQGNGCAADRLSAAARALMDDMLATVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLFKASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPFTAKFLAACNVAYADALPRTPAPLPVQPDTADVTAAESEENEIEDVKARAGGSCAVHADTI 412          
BLAST of jgi.p|Trimin1|351981 vs. uniprot
Match: A0A835YYM7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM7_9STRA)

HSP 1 Score: 683 bits (1762), Expect = 6.620e-246
Identity = 363/412 (88.11%), Postives = 379/412 (91.99%), Query Frame = 1
Query:    1 MTSLALAELLRKDSLRDSKGPGVTDCLQQHHPDICHDDTLCVRRTWRKTCGDDMVKNSSTYRAGLNKVVERAEQMARSATGREERAWAGRVKERVIAFDELSICNQRNLKASGRLEQTAARSYTGSVVMDRMLADLVRVPESAELPGPTAGTAAVASGSASAGGDPATAQQLHTQGNGCAADRLSAAARALMDDMLATVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLFKASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPFTAKFLAACNVAYADALPRTPAPLPVQPDTADVTAAESEENEIEDVKARAGGSCAVHADTI 1236
            MTSLALAELLRKDS+RD KG  VT CLQQH PDICHDDTLCVR TWRKTCGDDMVKNSSTY+AGLN+VVERA QMAR ATGREERAWAGRVKERVI FDELSIC+QR+LKASGRLEQTAARSYTGS V+DRMLADLV++PESAELPGP AGT A AS SA AG DPATAQQLHTQGNGCAADRLSAA RALM+DMLATVDYSRPKVFELVCALAFMCG SLAELMATGQFS AERERERAPYPWVLF+ASPSSKT+VILLLCGSH FL GLKRLRSMKQVASAASCKNINSRFCKSAN+AAKTVLGVA  AFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLP T KFLAACNVAYADAL +TPAPLPVQ   ADV AAESEE+EIEDV+A AGGSCA HA T+
Sbjct:    1 MTSLALAELLRKDSVRDPKG--VTGCLQQHRPDICHDDTLCVRHTWRKTCGDDMVKNSSTYKAGLNEVVERAGQMARGATGREERAWAGRVKERVIGFDELSICDQRHLKASGRLEQTAARSYTGSAVVDRMLADLVQMPESAELPGPPAGTTAAASASAPAGRDPATAQQLHTQGNGCAADRLSAATRALMEDMLATVDYSRPKVFELVCALAFMCGCSLAELMATGQFSTAERERERAPYPWVLFQASPSSKTDVILLLCGSHRFLIGLKRLRSMKQVASAASCKNINSRFCKSANSAAKTVLGVACGAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTVKFLAACNVAYADALAQTPAPLPVQLAVADVAAAESEESEIEDVEAPAGGSCA-HAGTV 409          
BLAST of jgi.p|Trimin1|351981 vs. uniprot
Match: A0A835ZC61_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC61_9STRA)

HSP 1 Score: 683 bits (1762), Expect = 7.400e-246
Identity = 366/414 (88.41%), Postives = 375/414 (90.58%), Query Frame = 1
Query:    1 MTSLALAELLRKDSLRDSKGPGVTDCLQQHHPDICHDDTLCVRRTWRKTCGDDMVKNSSTYRAGLNKVVERAEQMARSATGREERAWAGRVKERVIAFDELSICNQRNLKASGRLEQTAARSYTGSVVMDRMLADLVRVPESAELPGPTAGTAAVASGSASAGGDPATAQQLHTQGNGCAADRLSAAARALMDDMLATVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLFKASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPFTAKFLAACNVAYADALPRTPAPLPVQPDTA--DVTAAESEENEIEDVKARAGGSCAVHADTI 1236
            MTSLA AELL+KDSLRD K   V  CLQQH PDICH DTLC RRTWRKTCGDD+VKNSS Y+AGLN+ VERAEQMARSATGREERAWA RVKERVI FDELSICNQRNLKA GRLEQTAARSYTGSVV+DRMLADLVRVPESAELPGP AGTAA AS SA      AT QQLHTQGNGCAADRLSA ARALMDDMLATVDYSRPKVFELVCALAFM GRSLAELMATGQFSAAERERERAPYPWVLF+ASPSSKT+VILLLCGSHSFLNGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDV ALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLP TAKFLAACNVAY DALP+ P PLPVQP TA  DV A ESEENEIEDVKARAGGSCA HA T+
Sbjct:    1 MTSLAHAELLQKDSLRDPKL--VAGCLQQHRPDICHADTLCARRTWRKTCGDDVVKNSSMYKAGLNEAVERAEQMARSATGREERAWASRVKERVIGFDELSICNQRNLKARGRLEQTAARSYTGSVVVDRMLADLVRVPESAELPGPPAGTAAAASASAPTVDGRATTQQLHTQGNGCAADRLSATARALMDDMLATVDYSRPKVFELVCALAFMSGRSLAELMATGQFSAAERERERAPYPWVLFQASPSSKTDVILLLCGSHSFLNGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVSALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYTDALPQRPTPLPVQPATALSDVAAVESEENEIEDVKARAGGSCAAHAGTV 412          
BLAST of jgi.p|Trimin1|351981 vs. uniprot
Match: A0A836CES6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CES6_9STRA)

HSP 1 Score: 676 bits (1743), Expect = 2.890e-240
Identity = 364/414 (87.92%), Postives = 374/414 (90.34%), Query Frame = 1
Query:    1 MTSLALAELLRKDSLRDSKGPGVTDCLQQHHPDICHDDTLCVRRTWRKTCGDDMVKNSSTYRAGLNKVVERAEQMARSATGREERAWAGRVKERVIAFDELSICNQRNLKASGRLEQTAARSYTGSVVMDRMLADLVRVPESAELPGPTAGTAAVASGSASAGGDPATAQQLHTQGNGCAADRLSAAARALMDDMLATVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLFKASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPFTAKFLAACNVAYADALPRTPAPLPVQPDTA--DVTAAESEENEIEDVKARAGGSCAVHADTI 1236
            MTSLALAELL+KDSLRD K   V  CLQQH PDICH DTLC RRTWRKTCG+D+VKNSS Y+AGLN+ VERAEQMARSATGREERAWA RVKERVIAFD LSICNQRNLKASGRLEQTAARSYTGSVV+DRMLADLVRVPESAELPGP AGTAA AS SA      AT QQLHTQGNGC+ADRLS AARALMDDMLATV YSRPKVFELVCALAFM GRSLAELMAT QFSAAERERERAPYPWVLF+ASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCK INSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLP TAKFLAACNVAY DALP+ P PLPVQP TA  DV A ESEENEIEDVKARAG SCA HA T+
Sbjct:    1 MTSLALAELLQKDSLRDPKL--VAGCLQQHRPDICHADTLCARRTWRKTCGNDVVKNSSMYKAGLNEAVERAEQMARSATGREERAWASRVKERVIAFDALSICNQRNLKASGRLEQTAARSYTGSVVVDRMLADLVRVPESAELPGPPAGTAAAASASAPTVDGRATTQQLHTQGNGCSADRLSPAARALMDDMLATVAYSRPKVFELVCALAFMSGRSLAELMATSQFSAAERERERAPYPWVLFQASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKYINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYTDALPQRPTPLPVQPATAESDVAAVESEENEIEDVKARAGSSCAAHAGTL 412          
BLAST of jgi.p|Trimin1|351981 vs. uniprot
Match: A0A835Z0Q8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q8_9STRA)

HSP 1 Score: 667 bits (1720), Expect = 1.710e-239
Identity = 357/408 (87.50%), Postives = 373/408 (91.42%), Query Frame = 1
Query:    1 MTSLALAELLRKDSLRDSKGPGVTDCLQQHHPDICHDDTLCVRRTWRKTCGDDMVKNSSTYRAGLNKVVERAEQMARSATGREERAWAGRVKERVIAFDELSICNQRNLKASGRLEQTAARSYTGSVVMDRMLADLVRVPESAELPGPTAGTAAVASGSASAGGDPATAQQLHTQGNGCAADRLSAAARALMDDMLATVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLFKASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPFTAKFLAACNVAYADALPRTPAPLPVQPDTADVTAAESEENEIEDVKARAGGSCAVH 1224
            MTSLALAELL+KDSLRD K   VT CLQQH P+ICHDDTLCVRRT RK  GDD+VKNSS Y+AGLN+VV+RAEQM R ATGREERAWA R+KERVIAFD LSIC+QRNLKASGRLEQTAA+SYTGSVV+DRMLADLV+ PESAELPG  AGT A AS SA  GG  AT+QQL TQGNGCAADRLSAA RALMDDMLATVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLF+ASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLP TAKFLAACNVAY DALP+ P PLPVQP  ADV AAESEE+EIEDV+A AGGSCA H
Sbjct:    1 MTSLALAELLQKDSLRDPKV--VTGCLQQHRPNICHDDTLCVRRTRRKNYGDDVVKNSSAYKAGLNEVVKRAEQMVRGATGREERAWARRIKERVIAFDVLSICDQRNLKASGRLEQTAAKSYTGSVVVDRMLADLVQGPESAELPGSPAGTVAAASASAPXGGHLATSQQLDTQGNGCAADRLSAAGRALMDDMLATVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLFQASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYTDALPQRPTPLPVQPAVADVAAAESEESEIEDVEAPAGGSCASH 406          
BLAST of jgi.p|Trimin1|351981 vs. uniprot
Match: A0A835Z5E7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5E7_9STRA)

HSP 1 Score: 676 bits (1743), Expect = 2.440e-236
Identity = 364/414 (87.92%), Postives = 374/414 (90.34%), Query Frame = 1
Query:    1 MTSLALAELLRKDSLRDSKGPGVTDCLQQHHPDICHDDTLCVRRTWRKTCGDDMVKNSSTYRAGLNKVVERAEQMARSATGREERAWAGRVKERVIAFDELSICNQRNLKASGRLEQTAARSYTGSVVMDRMLADLVRVPESAELPGPTAGTAAVASGSASAGGDPATAQQLHTQGNGCAADRLSAAARALMDDMLATVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLFKASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPFTAKFLAACNVAYADALPRTPAPLPVQPDTA--DVTAAESEENEIEDVKARAGGSCAVHADTI 1236
            MTSLALAELL+KDSLRD K   V  CLQQH  DICH DTLC RRTWRKTCG+D+VKNSS Y+AGLN+ VERAEQMARSATGREERAWA RVKERVI FDELSICNQRNLKASGRLEQTAARSYTGSVV+DRMLADLVRVPESAELPGP AGTAA AS SA      AT QQLHTQGNGC+ADRLS AARALMDDMLATVDYSRPKVFELVCALAFM GRSLAELMAT QFSAAERERERAPYPWVLF+ASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCK INSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLP TAKFLAACNVAY DALP+ P PLPVQP TA  DV A ESEENEIEDVKARAG SCA HA T+
Sbjct:    1 MTSLALAELLQKDSLRDPKL--VAGCLQQHRLDICHADTLCARRTWRKTCGNDVVKNSSMYKAGLNEAVERAEQMARSATGREERAWASRVKERVIGFDELSICNQRNLKASGRLEQTAARSYTGSVVVDRMLADLVRVPESAELPGPPAGTAAAASASAPTVDGRATTQQLHTQGNGCSADRLSPAARALMDDMLATVDYSRPKVFELVCALAFMSGRSLAELMATSQFSAAERERERAPYPWVLFQASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKYINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYTDALPQRPTPLPVQPATAESDVAAVESEENEIEDVKARAGSSCAAHAGTL 412          
BLAST of jgi.p|Trimin1|351981 vs. uniprot
Match: A0A836CF72_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF72_9STRA)

HSP 1 Score: 555 bits (1430), Expect = 1.190e-194
Identity = 310/397 (78.09%), Postives = 325/397 (81.86%), Query Frame = 1
Query:   34 KDSLRDSKGPGVTDCLQQHHPDICHDDTLCVRRTWRKTCGDDMVKNSSTYRAGLNKVVERAEQMARSATGREERAWAGRVKERVIAFDELSICNQRNLKASGRLEQTAARSYTGSVVMDRMLADLVRVPESAELPGPTAGTAAVASGSASAGGDPATAQQLHTQGNGCAADRLSAAARALMDDMLATVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLFKASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPFTAKFLAACNVAYADALPRTPAPLPVQPDTADVTAAESEENEIEDVKARAGGSCAVH 1224
            KDSLRD K   VT CLQQH P+ICHDDTLCVRRT RK  GDD+VKNSS Y+AGLN+VVERAEQM R ATGREERAWA R+KERVIAFD LSIC+QRNLKASGRLEQTAA+SYTGSVV+DRMLADLV+ PESAELPG  AGT A AS SA  GG  AT+QQL TQGNGCAADRLSAA RA+MDDMLATVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLF+ASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQM+                                           ADV AAESEE+EIEDV+A AGGSCA H
Sbjct:  100 KDSLRDPKV--VTGCLQQHRPNICHDDTLCVRRTRRKNYGDDVVKNSSAYKAGLNEVVERAEQMVRGATGREERAWARRIKERVIAFDVLSICDQRNLKASGRLEQTAAKSYTGSVVVDRMLADLVQGPESAELPGSPAGTVAAASASAPXGGHLATSQQLDTQGNGCAADRLSAAGRAVMDDMLATVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLFQASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMT------------------------------------------VADVAAAESEESEIEDVEAPAGGSCASH 452          
BLAST of jgi.p|Trimin1|351981 vs. uniprot
Match: A0A836C7S3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7S3_9STRA)

HSP 1 Score: 537 bits (1384), Expect = 2.420e-187
Identity = 304/411 (73.97%), Postives = 311/411 (75.67%), Query Frame = 1
Query:    1 MTSLALAELLRKDSLRDSKGPGVTDCLQQHHPDICHDDTLCVRRTWRKTCGDDMVKNSSTYRAGLNKVVERAEQMARSATGREERAWAGRVKERVIAFDELSICNQRNLKASGRLEQTAARSYTGSVVMDRMLADLVRVPESAELPGPTAGTAAVASGSASAGGDPATAQQLHTQGNGCAADRLSAAARALMDDMLATVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLFKASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPFTAKFLAACNVAYADALPRTPAPLPVQPDTADVTAAESEENEIEDVKARAGGSCAVHADT 1233
            MTSLALAELLRKDSLRD K   V  CLQQH PDICHDDTLCVRRTWRKTCGDD+VKNSSTY+AGLN+V+ERAEQMAR ATGREERAWAGRVKERVIAFDELSICNQRN KASGRLEQTAARSYTGSVV+DRMLADLVRVPESAELPGP A TAA AS SA      AT QQLHTQGNGCAADRLSAAARALMDDMLA VDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVL +ASPSSKT                                NINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRC                                            SEENEI+DVKARAGGSCA HA T
Sbjct:    1 MTSLALAELLRKDSLRDPKA--VAGCLQQHRPDICHDDTLCVRRTWRKTCGDDVVKNSSTYKAGLNEVIERAEQMARGATGREERAWAGRVKERVIAFDELSICNQRNFKASGRLEQTAARSYTGSVVVDRMLADLVRVPESAELPGPPAHTAAAASASAPTVDGRATTQQLHTQGNGCAADRLSAAARALMDDMLAMVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLSQASPSSKT--------------------------------NINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRC--------------------------------------------SEENEIKDVKARAGGSCAAHAGT 333          
BLAST of jgi.p|Trimin1|351981 vs. uniprot
Match: A0A835ZAN0_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAN0_9STRA)

HSP 1 Score: 506 bits (1303), Expect = 1.280e-167
Identity = 290/406 (71.43%), Postives = 309/406 (76.11%), Query Frame = 1
Query:    1 MTSLALAELLRKDSLRDSKGPGVTDCLQQHHPDICHDDTLCVRRTWRKTCGDDMVKNSSTYRAGLNKVVERAEQMARSATGREERAWAGRVKERVIAFDELSICNQRNLKASGRLEQTAARSYTGSVVMDRMLADLVRVPESAELPGPTAGTAAVASGSASAGGDPATAQQLHTQGNGCAADRLSAAARALMDDMLATVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLFKASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPFTAKFLAACNVAYADALPRTPAPLPVQPDTA--DVTAAESEENEIEDVKARAGGS 1212
            MTSLALAELL+KDSLRD K   V  CLQQH PDICHDDTLC RRT RKTCG+D+VKNSS Y+AGLN+ VERAEQM RSATGREERAWAG VKERVI FDELSICNQR LKA GRLEQTAARSYTGSVV+DRMLADLVR PESAELPGP AGTAA AS SA      AT QQLHTQGNGCAADRLSAAARALMDD LATVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLF+ASPSSKTE ILLLCGSHSFLNGLKRLR++ +       + +       A+  A+T+       +  V +L  GL                               +KFLAACNVAY DALP+ P PLPVQP TA  DV AAESEENEIEDVKARAGGS
Sbjct:  510 MTSLALAELLQKDSLRDPKL--VAGCLQQHRPDICHDDTLCARRTGRKTCGNDVVKNSSMYKAGLNEAVERAEQMVRSATGREERAWAGPVKERVIGFDELSICNQRKLKARGRLEQTAARSYTGSVVVDRMLADLVRAPESAELPGPPAGTAAAASASAPTVDGRATTQQLHTQGNGCAADRLSAAARALMDDTLATVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLFQASPSSKTEAILLLCGSHSFLNGLKRLRTINRWRQRRCARTLTR-----ASARAQTLRPRLCWGWPPVHSLTSGL-------------------------------SKFLAACNVAYTDALPQRPTPLPVQPATAESDVAAAESEENEIEDVKARAGGS 877          
BLAST of jgi.p|Trimin1|351981 vs. uniprot
Match: A0A835ZBV3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBV3_9STRA)

HSP 1 Score: 209 bits (533), Expect = 7.320e-63
Identity = 111/120 (92.50%), Postives = 113/120 (94.17%), Query Frame = 1
Query:  829 MKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPFTAKFLAACNVAYADALPRTPAPLPVQPDTADVTAAESEENEIED 1188
            MKQVASAASCKNINSRFCKSANTAAKTVLGVASS+FSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLP TAKFLAACNVAY DALP+ P PLPVQP  ADV AAESEENEIED
Sbjct:    1 MKQVASAASCKNINSRFCKSANTAAKTVLGVASSSFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYTDALPQRPTPLPVQPAVADVAAAESEENEIED 120          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351981 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A835ZG17_9STRA1.620e-288100.00Uncharacterized protein n=3 Tax=Tribonema minus Ta... [more]
A0A835YYM7_9STRA6.620e-24688.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZC61_9STRA7.400e-24688.41Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A836CES6_9STRA2.890e-24087.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0Q8_9STRA1.710e-23987.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z5E7_9STRA2.440e-23687.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CF72_9STRA1.190e-19478.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C7S3_9STRA2.420e-18773.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZAN0_9STRA1.280e-16771.43Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835ZBV3_9STRA7.320e-6392.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_104contigContig_104:486157..487395 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|351981|estExt_Genemark1.C_Ctg_1040076
Hectar predicted targeting categoryother localisation
TranscriptId352303
TrackFilteredModels1
ProteinId351981
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351981gene_10244Tribonema minus UTEX_B_3156 geneContig_104 486157..487395 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_10244_1exon_10244_1Tribonema minus UTEX_B_3156 exonContig_104 486157..487395 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_10244CDS_10244Tribonema minus UTEX_B_3156 CDSContig_104 486157..487395 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351981Trimin1|351981|estExt_Genemark1.C_Ctg_1040076Tribonema minus UTEX_B_3156 polypeptideContig_104 486157..487395 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_10244 ID=mRNA_10244|Name=jgi.p|Trimin1|351981|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1239bp|location=Sequence derived from alignment at Contig_104:486157..487395+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACTTCACTAGCGCTCGCCGAGTTGCTGCGGAAGGATAGTCTAAGGGA
CTCCAAGGGTCCCGGAGTAACCGATTGCCTGCAGCAGCACCACCCCGACA
TCTGTCACGATGACACGCTGTGCGTGAGGCGCACATGGCGCAAGACCTGT
GGCGATGACATGGTCAAGAACAGCAGCACGTACAGGGCGGGACTGAACAA
GGTCGTCGAGCGCGCAGAGCAGATGGCGCGCAGCGCCACAGGCCGTGAGG
AGAGAGCATGGGCAGGGCGGGTCAAGGAGCGCGTCATCGCCTTCGACGAG
CTAAGCATCTGCAATCAACGCAACCTCAAGGCGAGCGGGCGCCTTGAGCA
GACCGCGGCAAGGTCTTACACCGGCAGCGTCGTCATGGACCGCATGTTGG
CGGACCTCGTGCGGGTGCCTGAGTCGGCAGAGCTGCCTGGTCCGACAGCA
GGCACCGCGGCGGTAGCATCAGGTTCAGCGTCAGCAGGTGGTGACCCGGC
CACGGCACAGCAGCTTCACACGCAGGGTAATGGTTGTGCCGCCGACAGAT
TGAGTGCCGCGGCGCGAGCTCTGATGGACGACATGCTGGCAACGGTAGAC
TACTCTCGCCCCAAGGTGTTTGAGCTGGTGTGCGCGTTGGCGTTTATGTG
CGGCCGCAGCCTGGCCGAATTGATGGCAACGGGCCAGTTCAGCGCTGCGG
AGAGGGAGCGGGAGCGCGCGCCATACCCGTGGGTGCTGTTCAAGGCGAGC
CCAAGCAGCAAGACGGAAGTGATTCTACTGCTGTGCGGATCCCACAGCTT
CCTCAACGGGCTGAAACGGCTACGGAGCATGAAACAGGTGGCGTCAGCGG
CGTCGTGCAAGAACATCAACTCACGCTTCTGCAAGAGCGCAAACACTGCG
GCCAAGACTGTGTTGGGGGTGGCCTCCAGTGCCTTCTCTGACGTCAGGGC
TCTCTATGTGGGGCTCACCCTCGCTCTGTACGGCAGCGCCAAGACCACCA
GCAAGCAGATGAGTGAGTGGACGCGGCGCTGCGTACCCAACTCAAACCTT
CCCTTTACAGCAAAGTTCCTGGCCGCGTGCAACGTCGCTTACGCAGATGC
GCTCCCCCGGACGCCGGCGCCGTTGCCAGTTCAACCAGACACAGCAGATG
TCACTGCGGCGGAGAGCGAGGAGAATGAGATCGAGGACGTCAAAGCGCGT
GCAGGCGGCAGCTGCGCTGTGCACGCAGACACCATATGA
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protein sequence of jgi.p|Trimin1|351981

>Trimin1|351981|estExt_Genemark1.C_Ctg_1040076 ID=Trimin1|351981|estExt_Genemark1.C_Ctg_1040076|Name=jgi.p|Trimin1|351981|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=413bp
MTSLALAELLRKDSLRDSKGPGVTDCLQQHHPDICHDDTLCVRRTWRKTC
GDDMVKNSSTYRAGLNKVVERAEQMARSATGREERAWAGRVKERVIAFDE
LSICNQRNLKASGRLEQTAARSYTGSVVMDRMLADLVRVPESAELPGPTA
GTAAVASGSASAGGDPATAQQLHTQGNGCAADRLSAAARALMDDMLATVD
YSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLFKAS
PSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKNINSRFCKSANTA
AKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNL
PFTAKFLAACNVAYADALPRTPAPLPVQPDTADVTAAESEENEIEDVKAR
AGGSCAVHADTI*
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mRNA from alignment at Contig_104:486157..487395+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_10244 ID=mRNA_10244|Name=jgi.p|Trimin1|351981|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1239bp|location=Sequence derived from alignment at Contig_104:486157..487395+ (Tribonema minus UTEX_B_3156 )
ATGACTTCACTAGCGCTCGCCGAGTTGCTGCGGAAGGATAGTCTAAGGGA CTCCAAGGGTCCCGGAGTAACCGATTGCCTGCAGCAGCACCACCCCGACA TCTGTCACGATGACACGCTGTGCGTGAGGCGCACATGGCGCAAGACCTGT GGCGATGACATGGTCAAGAACAGCAGCACGTACAGGGCGGGACTGAACAA GGTCGTCGAGCGCGCAGAGCAGATGGCGCGCAGCGCCACAGGCCGTGAGG AGAGAGCATGGGCAGGGCGGGTCAAGGAGCGCGTCATCGCCTTCGACGAG CTAAGCATCTGCAATCAACGCAACCTCAAGGCGAGCGGGCGCCTTGAGCA GACCGCGGCAAGGTCTTACACCGGCAGCGTCGTCATGGACCGCATGTTGG CGGACCTCGTGCGGGTGCCTGAGTCGGCAGAGCTGCCTGGTCCGACAGCA GGCACCGCGGCGGTAGCATCAGGTTCAGCGTCAGCAGGTGGTGACCCGGC CACGGCACAGCAGCTTCACACGCAGGGTAATGGTTGTGCCGCCGACAGAT TGAGTGCCGCGGCGCGAGCTCTGATGGACGACATGCTGGCAACGGTAGAC TACTCTCGCCCCAAGGTGTTTGAGCTGGTGTGCGCGTTGGCGTTTATGTG CGGCCGCAGCCTGGCCGAATTGATGGCAACGGGCCAGTTCAGCGCTGCGG AGAGGGAGCGGGAGCGCGCGCCATACCCGTGGGTGCTGTTCAAGGCGAGC CCAAGCAGCAAGACGGAAGTGATTCTACTGCTGTGCGGATCCCACAGCTT CCTCAACGGGCTGAAACGGCTACGGAGCATGAAACAGGTGGCGTCAGCGG CGTCGTGCAAGAACATCAACTCACGCTTCTGCAAGAGCGCAAACACTGCG GCCAAGACTGTGTTGGGGGTGGCCTCCAGTGCCTTCTCTGACGTCAGGGC TCTCTATGTGGGGCTCACCCTCGCTCTGTACGGCAGCGCCAAGACCACCA GCAAGCAGATGAGTGAGTGGACGCGGCGCTGCGTACCCAACTCAAACCTT CCCTTTACAGCAAAGTTCCTGGCCGCGTGCAACGTCGCTTACGCAGATGC GCTCCCCCGGACGCCGGCGCCGTTGCCAGTTCAACCAGACACAGCAGATG TCACTGCGGCGGAGAGCGAGGAGAATGAGATCGAGGACGTCAAAGCGCGT GCAGGCGGCAGCTGCGCTGTGCACGCAGACACCATATGA
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Coding sequence (CDS) from alignment at Contig_104:486157..487395+

>mRNA_10244 ID=mRNA_10244|Name=jgi.p|Trimin1|351981|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1239bp|location=Sequence derived from alignment at Contig_104:486157..487395+ (Tribonema minus UTEX_B_3156 )
ATGACTTCACTAGCGCTCGCCGAGTTGCTGCGGAAGGATAGTCTAAGGGA
CTCCAAGGGTCCCGGAGTAACCGATTGCCTGCAGCAGCACCACCCCGACA
TCTGTCACGATGACACGCTGTGCGTGAGGCGCACATGGCGCAAGACCTGT
GGCGATGACATGGTCAAGAACAGCAGCACGTACAGGGCGGGACTGAACAA
GGTCGTCGAGCGCGCAGAGCAGATGGCGCGCAGCGCCACAGGCCGTGAGG
AGAGAGCATGGGCAGGGCGGGTCAAGGAGCGCGTCATCGCCTTCGACGAG
CTAAGCATCTGCAATCAACGCAACCTCAAGGCGAGCGGGCGCCTTGAGCA
GACCGCGGCAAGGTCTTACACCGGCAGCGTCGTCATGGACCGCATGTTGG
CGGACCTCGTGCGGGTGCCTGAGTCGGCAGAGCTGCCTGGTCCGACAGCA
GGCACCGCGGCGGTAGCATCAGGTTCAGCGTCAGCAGGTGGTGACCCGGC
CACGGCACAGCAGCTTCACACGCAGGGTAATGGTTGTGCCGCCGACAGAT
TGAGTGCCGCGGCGCGAGCTCTGATGGACGACATGCTGGCAACGGTAGAC
TACTCTCGCCCCAAGGTGTTTGAGCTGGTGTGCGCGTTGGCGTTTATGTG
CGGCCGCAGCCTGGCCGAATTGATGGCAACGGGCCAGTTCAGCGCTGCGG
AGAGGGAGCGGGAGCGCGCGCCATACCCGTGGGTGCTGTTCAAGGCGAGC
CCAAGCAGCAAGACGGAAGTGATTCTACTGCTGTGCGGATCCCACAGCTT
CCTCAACGGGCTGAAACGGCTACGGAGCATGAAACAGGTGGCGTCAGCGG
CGTCGTGCAAGAACATCAACTCACGCTTCTGCAAGAGCGCAAACACTGCG
GCCAAGACTGTGTTGGGGGTGGCCTCCAGTGCCTTCTCTGACGTCAGGGC
TCTCTATGTGGGGCTCACCCTCGCTCTGTACGGCAGCGCCAAGACCACCA
GCAAGCAGATGAGTGAGTGGACGCGGCGCTGCGTACCCAACTCAAACCTT
CCCTTTACAGCAAAGTTCCTGGCCGCGTGCAACGTCGCTTACGCAGATGC
GCTCCCCCGGACGCCGGCGCCGTTGCCAGTTCAACCAGACACAGCAGATG
TCACTGCGGCGGAGAGCGAGGAGAATGAGATCGAGGACGTCAAAGCGCGT
GCAGGCGGCAGCTGCGCTGTGCACGCAGACACCATATGA
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