mRNA_10217 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|351967
Unique NamemRNA_10217
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|351967 vs. uniprot
Match: A0A835ZDD2_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDD2_9STRA)

HSP 1 Score: 504 bits (1297), Expect = 1.790e-177
Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 1 
Query:    1 MLFLGLAALLAXXXXXXXXXXXXXXXXXXXXXXARHLQSPSAAELQPEHYQPGGGHGDDSDDSPAQEHKEHSLLKNVLLGSLYSILAFAVLVCVSRKLAQARQNYAAAAERRRSGEHALTKAAIDSLPLEPFKAAKCPPPRGGTPDRGQGGGVCXXXXXXXXXXXXXXXXXXSTAEGEIKAVKSSPAALEEARDVDGDAICAVCLCGFESGEMLRVVPHCNHRYHQACLDTWLATKGVCPLCKQPVHEPAEPWTCRRALRIAAQPLRECFYEVAQTHTVQDLRGALRGWLQARRQRATGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPEASPV 1017
            MLFLGLAALLAXXXXXXXXXXXXXXXXXXXXXXARHLQSPSAAELQPEHYQPGGGHGDDSDDSPAQEHKEHSLLKNVLLGSLYSILAFAVLVCVSRKLAQARQNYAAAAERRRSGEHALTKAAIDSLPLEPFKAAKCPPPRGGTPDRGQGGGVCXXXXXXXXXXXXXXXXXXSTAEGEIKAVKSSPAALEEARDVDGDAICAVCLCGFESGEMLRVVPHCNHRYHQACLDTWLATKGVCPLCKQPVHEPAEPWTCRRALRIAAQPLRECFYEVAQTHTVQDLRGALRGWLQARRQRATGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPEASPV
Sbjct:    1 MLFLGLAALLAXXXXXXXXXXXXXXXXXXXXXXARHLQSPSAAELQPEHYQPGGGHGDDSDDSPAQEHKEHSLLKNVLLGSLYSILAFAVLVCVSRKLAQARQNYAAAAERRRSGEHALTKAAIDSLPLEPFKAAKCPPPRGGTPDRGQGGGVCXXXXXXXXXXXXXXXXXXSTAEGEIKAVKSSPAALEEARDVDGDAICAVCLCGFESGEMLRVVPHCNHRYHQACLDTWLATKGVCPLCKQPVHEPAEPWTCRRALRIAAQPLRECFYEVAQTHTVQDLRGALRGWLQARRQRATGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPEASPV 339
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BLAST of jgi.p|Trimin1|351967 vs. uniprot
Match: A0A835ZK41_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK41_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 8.170e-16
Identity = 36/59 (61.02%), Postives = 44/59 (74.58%), Query Frame = 1 
Query:  565 LEEARDVDGDAICAVCLCGFESGEMLRVVPHCNHRYHQACLDTWLATKGVCPLCKQPVH 741
            +E  R+  GD +CA+CL  FE G+ LRVVPHC H+YH+ACLD WL TK +CPLCKQ V 
Sbjct:  239 VEGGREGVGDLMCAICLADFEGGDQLRVVPHCFHQYHKACLDPWLETKAICPLCKQRVR 297
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BLAST of jgi.p|Trimin1|351967 vs. uniprot
Match: A0A836C7Z7_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Z7_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 9.540e-15
Identity = 32/47 (68.09%), Postives = 40/47 (85.11%), Query Frame = 1 
Query:  601 CAVCLCGFESGEMLRVVPHCNHRYHQACLDTWLATKGVCPLCKQPVH 741
            CA+CL  FE+G++LRVVP CNH YH+ACLD WL ++G+CPLCKQ VH
Sbjct:  121 CAICLNEFETGDVLRVVPRCNHHYHKACLDPWLESRGICPLCKQLVH 167
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BLAST of jgi.p|Trimin1|351967 vs. uniprot
Match: J3LIR8_ORYBR (RING-type domain-containing protein n=2 Tax=Oryza brachyantha TaxID=4533 RepID=J3LIR8_ORYBR)

HSP 1 Score: 74.7 bits (182), Expect = 1.440e-12
Identity = 35/78 (44.87%), Postives = 43/78 (55.13%), Query Frame = 1 
Query:  538 KAVKSSPAALEEARDVDGDAICAVCLCGFESGEMLRVVPHCNHRYHQACLDTWLATKGVCPLCKQPVHEPAEPWTCRR 771
            KA+ + P     A      A CA+CL  F +GE LRV+PHC H +H AC+DTWL T   CP C+  V     P  CRR
Sbjct:   55 KAIDAIPTVSFAAGKQQQTAECAICLAEFGAGEELRVLPHCGHGFHVACIDTWLGTHATCPSCRATVATLFVPGRCRR 132
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BLAST of jgi.p|Trimin1|351967 vs. uniprot
Match: A0A0D9VN43_9ORYZ (RING-type domain-containing protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9VN43_9ORYZ)

HSP 1 Score: 73.6 bits (179), Expect = 9.170e-12
Identity = 35/82 (42.68%), Postives = 43/82 (52.44%), Query Frame = 1 
Query:  538 KAVKSSPAALEEARDVDGDAICAVCLCGFESGEMLRVVPHCNHRYHQACLDTWLATKGVCPLCKQPVHEPAE----PWTCRR 771
            KA+ + P     A D    A C +CL  F +GE LRV+PHC H +H AC+DTWL     CP C+  V  P      P  CRR
Sbjct:   82 KAIDALPTVSYAAGDKQQAAECIICLAEFAAGEELRVLPHCGHGFHMACIDTWLGAHATCPSCRATVGTPPPALFLPGRCRR 163
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BLAST of jgi.p|Trimin1|351967 vs. uniprot
Match: UPI0011D221B0 (RING-H2 finger protein ATL66 n=1 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D221B0)

HSP 1 Score: 72.0 bits (175), Expect = 1.310e-11
Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 1 
Query:  553 SPAALEEARDVDGDAICAVCLCGFESGEMLRVVPHCNHRYHQACLDTWLATKGVCPLCKQPV 738
            +P+ +EEA +      C++CL  FE GE ++V+P C HRYH  C+D WLAT+ VCPLC+ P+
Sbjct:   93 APSEVEEAGE------CSICLGEFEDGEKVKVLPQCGHRYHCGCVDQWLATRSVCPLCRAPL 148
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BLAST of jgi.p|Trimin1|351967 vs. uniprot
Match: A0A6P5GB10_ANACO (RING-H2 finger protein ATL2-like n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GB10_ANACO)

HSP 1 Score: 71.6 bits (174), Expect = 3.070e-11
Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 1 
Query:  574 ARDVDGDAICAVCLCGFESGEMLRVVPHCNHRYHQACLDTWLATKGVCPLCKQPV 738
            A  V+G   CAVCL GF+ GE+ +V+P CNHR+H  C+D WL   G CPLC+  V
Sbjct:  103 ANGVEGAVDCAVCLAGFQDGEIGQVLPRCNHRFHAECVDMWLQLGGACPLCRAAV 157
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BLAST of jgi.p|Trimin1|351967 vs. uniprot
Match: A0A8J5SPN7_ZIZPA (RING-type domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5SPN7_ZIZPA)

HSP 1 Score: 72.0 bits (175), Expect = 3.110e-11
Identity = 30/60 (50.00%), Postives = 37/60 (61.67%), Query Frame = 1 
Query:  601 CAVCLCGFESGEMLRVVPHCNHRYHQACLDTWLATKGVCPLCKQPVHEPAE---PWTCRR 771
            CA+CL  F +GE +RV+PHC H +H AC+DTWL T   CP C+  V  P     P  CRR
Sbjct:  109 CAICLAEFAAGEAVRVLPHCGHDFHVACIDTWLGTHATCPSCRSTVGTPPTLFLPGRCRR 168
[Close]
BLAST of jgi.p|Trimin1|351967 vs. uniprot
Match: A0A8J5WCJ0_ZIZPA (RING-type domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WCJ0_ZIZPA)

HSP 1 Score: 72.8 bits (177), Expect = 3.260e-11
Identity = 29/54 (53.70%), Postives = 38/54 (70.37%), Query Frame = 1 
Query:  595 AICAVCLCGFESGEMLRVVPHCNHRYHQACLDTWLATKGVCPLCKQPVHEPAEP 756
            ++CA+CL  F SGE +RV+P+CNH +HQ C+D WL     CP C+QP   PAEP
Sbjct:  163 SLCAICLAEFSSGEQVRVLPNCNHGFHQRCIDRWLRVHPTCPTCRQPPF-PAEP 215
[Close]
BLAST of jgi.p|Trimin1|351967 vs. uniprot
Match: A0A162AH60_DAUCS (RING-type domain-containing protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A162AH60_DAUCS)

HSP 1 Score: 72.0 bits (175), Expect = 3.730e-11
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 1 
Query:  601 CAVCLCGFESGEMLRVVPHCNHRYHQACLDTWLATKGVCPLCKQPVHEP 747
            CAVCL   E GE++R++P+C+H +H AC+DTWL+T   CP+C+  V  P
Sbjct:   93 CAVCLSNLEDGELIRILPNCDHNFHVACIDTWLSTNSTCPVCRSAVEPP 141
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351967 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZDD2_9STRA1.790e-177100.00RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835ZK41_9STRA8.170e-1661.02RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A836C7Z7_9STRA9.540e-1568.09RING-type domain-containing protein n=1 Tax=Tribon... [more]
J3LIR8_ORYBR1.440e-1244.87RING-type domain-containing protein n=2 Tax=Oryza ... [more]
A0A0D9VN43_9ORYZ9.170e-1242.68RING-type domain-containing protein n=1 Tax=Leersi... [more]
UPI0011D221B01.310e-1148.39RING-H2 finger protein ATL66 n=1 Tax=Syzygium oleo... [more]
A0A6P5GB10_ANACO3.070e-1152.73RING-H2 finger protein ATL2-like n=2 Tax=Ananas co... [more]
A0A8J5SPN7_ZIZPA3.110e-1150.00RING-type domain-containing protein n=1 Tax=Zizani... [more]
A0A8J5WCJ0_ZIZPA3.260e-1153.70RING-type domain-containing protein n=1 Tax=Zizani... [more]
A0A162AH60_DAUCS3.730e-1151.02RING-type domain-containing protein n=1 Tax=Daucus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_104contigContig_104:339600..343172 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|351967|estExt_Genemark1.C_Ctg_1040055
BRITEko00000,ko01000,ko04121
KEGG koko:K19040
EC2.3.2.27
GOsGO:0003674,GO:0003824,GO:0004842,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0019941,GO:0030163,GO:0032446,GO:0036211,GO:0043161,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0051603,GO:0061630,GO:0061659,GO:0070647,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575
DescriptionRING-H2 finger protein
COG categoryO
Max annot lvl35493|Streptophyta
EggNOG OGsKOG0800@1|root,KOG0800@2759|Eukaryota,37Q47@33090|Viridiplantae,3GCXD@35493|Streptophyta
Evalue2.6e-13
Seed ortholog3218.PP1S85_173V6.1
Hectar predicted targeting categorysignal peptide
TranscriptId352289
TrackFilteredModels1
ProteinId351967
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351967gene_10217Tribonema minus UTEX_B_3156 geneContig_104 339600..343172 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351967Trimin1|351967|estExt_Genemark1.C_Ctg_1040055Tribonema minus UTEX_B_3156 polypeptideContig_104 339600..343172 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_10217_5exon_10217_5Tribonema minus UTEX_B_3156 exonContig_104 339600..339852 -
exon_10217_4exon_10217_4Tribonema minus UTEX_B_3156 exonContig_104 340311..340399 -
exon_10217_3exon_10217_3Tribonema minus UTEX_B_3156 exonContig_104 341169..341396 -
exon_10217_2exon_10217_2Tribonema minus UTEX_B_3156 exonContig_104 341490..341919 -
exon_10217_1exon_10217_1Tribonema minus UTEX_B_3156 exonContig_104 343153..343172 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_10217CDS_10217Tribonema minus UTEX_B_3156 CDSContig_104 343153..343172 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_10217 ID=mRNA_10217|Name=jgi.p|Trimin1|351967|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1020bp|location=Sequence derived from alignment at Contig_104:339600..343172- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGTTCTTGGGTTTAGCGGCCCTCCTGGCAGCATGCGTCGCGCACAC
CGTAACTGCCAGTGTAACTGCCAGCATAAATGCAGCAGCAGCAGCGGCCG
CGCGGCATCTGCAGAGCCCGTCCGCCGCCGAACTTCAACCCGAACACTAC
CAGCCAGGGGGGGGGCACGGCGACGACTCCGATGACTCTCCCGCGCAGGA
ACACAAGGAACACTCCCTGTTGAAGAACGTTCTGCTGGGGAGCCTGTACT
CGATCCTCGCGTTCGCGGTGCTGGTGTGCGTCTCGCGCAAGCTCGCGCAG
GCGCGCCAGAACTACGCCGCCGCTGCGGAGCGGCGCCGCAGCGGCGAGCA
CGCGCTGACGAAGGCTGCCATAGACTCGCTGCCCCTGGAGCCCTTCAAGG
CCGCCAAGTGTCCCCCTCCGAGGGGGGGGACGCCCGACCGAGGGCAGGGG
GGGGGCGTCTGTTGCGGCGGCGCTGCGCGCTGCGCCGGTGCAACACCGGC
GGCGGCGGCGGCAGCATCGACGGCGGAAGGGGAGATAAAGGCGGTCAAGT
CATCGCCCGCGGCTCTAGAAGAGGCGCGGGATGTGGATGGCGACGCCATC
TGCGCGGTGTGCCTGTGCGGGTTTGAGAGCGGGGAGATGCTGCGCGTGGT
GCCGCACTGCAACCACCGCTACCACCAGGCATGCCTGGACACTTGGCTTG
CCACAAAGGGCGTCTGCCCGCTGTGCAAGCAGCCCGTGCACGAGCCTGCG
GAGCCGTGGACATGCAGGCGCGCATTGCGCATCGCGGCGCAGCCGCTGCG
CGAGTGCTTCTACGAAGTGGCACAGACGCACACGGTGCAGGACCTGCGGG
GGGCGCTGAGGGGGTGGCTGCAGGCCAGAAGACAACGAGCCACAGGCCAT
CATCAAGCAGCACCAGCAGCAGCACTAGCAGCAGCGGCCGCAGCAGCAGC
AGCAGCAGCGGCGGCGGGCGCGCAGCAGCAGCCAGCGGCGGCCGCTGCGC
CAGAGGCTTCGCCAGTGTAG
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protein sequence of jgi.p|Trimin1|351967

>Trimin1|351967|estExt_Genemark1.C_Ctg_1040055 ID=Trimin1|351967|estExt_Genemark1.C_Ctg_1040055|Name=jgi.p|Trimin1|351967|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=340bp
MLFLGLAALLAACVAHTVTASVTASINAAAAAAARHLQSPSAAELQPEHY
QPGGGHGDDSDDSPAQEHKEHSLLKNVLLGSLYSILAFAVLVCVSRKLAQ
ARQNYAAAAERRRSGEHALTKAAIDSLPLEPFKAAKCPPPRGGTPDRGQG
GGVCCGGAARCAGATPAAAAAASTAEGEIKAVKSSPAALEEARDVDGDAI
CAVCLCGFESGEMLRVVPHCNHRYHQACLDTWLATKGVCPLCKQPVHEPA
EPWTCRRALRIAAQPLRECFYEVAQTHTVQDLRGALRGWLQARRQRATGH
HQAAPAAALAAAAAAAAAAAAAGAQQQPAAAAAPEASPV*
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mRNA from alignment at Contig_104:339600..343172-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_10217 ID=mRNA_10217|Name=jgi.p|Trimin1|351967|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3573bp|location=Sequence derived from alignment at Contig_104:339600..343172- (Tribonema minus UTEX_B_3156 )
ATGCTGTTCTTGGGTTTAGCGTATTGGGCGTCTGATGGCCCTGCAAGTTG
AGCGTGGGACTCTGCAAGCCCCAGGGTATATGTGCTGGGCACTTGCGCTA
CACGCACGCTATGAAGTACCAGCACCAATTGGCAGCGCTATCAGCACCAT
TAGCAGCAGCAGCACCATCAGCAGCTGCAGCGCTCATATTGGGTCTTGCT
GCGATATGGTGTACTGACATACTGCACCCCGTACACACACCCCAGCGGCA
GTGCATCATGAAACAAAGCGCTACAAGTCTTTCTGAGCAGCACAGCAGAT
TTGCGGCTACCTGCACCGCCCAGCAAACCTGAAATACCCGCAAGGTCGTC
TGCAAGGCGCCGCGTCTGTGTGCCATTGGTGTGCGCTTGCGCCGCTGTAA
TAGCGGCCAATGTGTCTGCTGCTCGGCACTTGCTCGCAACACATATGCAT
CGTACGCCGCACCAAAGGTGCAGAGAGCCCACTGTCTGCCGCAAGAAACC
GCTTGGGATGGCGTGTCTGGCAGTTGGCCTGGGGCTTGTGCCAGCCAAAC
CTGGACACACAAGTGCCTTTTACTGCGCAGCCCCCACTACAGTAGGCCCA
CCCCCTGATTGAACATTACTCCCCGGGTTTAGAGAGCCCACTGTTCGTCA
CCAGGAACTGATCACGGCCGTGTGCCTGGCAATTGGTGTGGGGCTAGTGC
CAGCCGCACCTGCCAGTGGACGCACTTCCTTCCTGCGCACCCGCTCCATA
GACCCCCCCTTCCTGTCAAAGGACCCCTGATTCTTATCGCTAGCCACTGC
TGCCACTCACTGCTGTCTCCCCTCAGCACAGCACAGCCTCTGTACAGCGT
CTGAACACTTTGTACACTTTTGAGCATCGTACATCCAGTTCCTTGAGCAC
ATCGCCTATCCCCTATCAGCTGAATCACTGTGTCGATCTAAACTTCAGTC
GATTGTACGGCACACACCGTAGCAGTACATAGAAGCTGCCATTTCTTCAA
GCCCCAACCTACCCCCAGACCGCACCTGGGCTGGCGCTCGAGCGCACGCA
CCGCTGACCAGCGATACACACCTCAACCCCGAGCAAAACTGCACGACATT
TCGATCCTGCTGCAGATTCGCCTTTACATATCTACTCCTAGCCCTACCGC
TTCGTTCCTCGCACGCGTGCACACCGCTCACTGCAGACCTAACTTTGACA
CGTATCTCTCGCACTCATTCCCCCCCCCCCCCCCGCACGTCTGTCGCGAC
CAGGGCCCTCCTGGCAGCATGCGTCGCGCACACCGTAACTGCCAGTGTAA
CTGCCAGCATAAATGCAGCAGCAGCAGCGGCCGCGCGGCATCTGCAGAGC
CCGTCCGCCGCCGAACTTCAACCCGAACACTACCAGCCAGGGGGGGGGCA
CGGCGACGACTCCGATGACTCTCCCGCGCAGGAACACAAGGAACACTCCC
TGTTGAAGAACGTTCTGCTGGGGAGCCTGTACTCGATCCTCGCGTTCGCG
GTGCTGGTGTGCGTCTCGCGCAAGCTCGCGCAGGCGCGCCAGAACTACGC
CGCCGCTGCGGAGCGGCGCCGCAGCGGCGAGCACGCGCTGACGAAGGCTG
CCATAGACTCGCTGCCCCTGGAGCCCTTCAAGGCCGCCAAGTGTCCCCCT
CCGAGGGGGGGGACGCCCGACCGAGGGCAGGGGGTCTCTTGCAGCAGTGC
TCAACACCCCTCTGTAGCGATGACCCCTGGTGATGAAGGGGGCGTGTGTT
GCGCTACGCCGGGTACCCCTGAACAGGGGGGCGTCTGTTGCGGCGGCGCT
GCGCGCTGCGCCGGTGCAACACCGGCGGCGGCGGCGGCAGCATCGACGGC
GGAAGGGGAGATAAAGGCGGTCAAGTCATCGCCCGCGGCTCTAGAAGAGG
CGCGGGATGTGGATGGCGACGCCATCTGCGCGGTGTGCCTGTGCGGGTTT
GAGAGCGGGGAGATGCTGCGCGTGGTGCCGCACTGCAACCACCGCTACCA
CCAGGTGAGCAGCAGCGAGCAGCCGCAGCAGCAGTGCTCAGCGTATACTC
CAGGGTGCTGCTGGTGCTGTCTGAGCCACCAATGCTTGCGACAAACGAAC
TTGCGGGCTCAGCTGACTTCAGGGTGCTGCTGGTGCTGTCTGAGCCACCA
ATTGTTGCGACAATCGAATTTACGCGCTCAGCTGGTGGTGATGCAGCGGC
AGCGGTGAGCATCGAGGGGCGGGGGGGTCGGGGGTGGGGGGGGTGGCGGG
GGTAAACAAAAGCAGCGCTCTGCAGCATTTGAGCAGTGCTCAGCGGTAGC
TTAAGGCAGCTCAGCAGCAGGTGCTCAGCGCTCAGCAAGGGGCCGTGCTG
TGGGCTGTGCGCTGCGGGCTGGTGGTGGGGGAGAGGGGGGCGGCGACTGC
GGGCAGGTTGCGAACCGAGTGGAATGATACTTAGTGCCATATGCATTCGT
GTGTGAGTGACATGCATGCACATTCGTTGTGTGTGTGCGAGAGGGAGGTG
CGGTGTTGTAACTGCCACTGCCGGCATCACCGGGTGATGTTCTTTTCGAG
CTGGTGTGCTGCACGCTTGACTAGGTGGGATGAGCAGGTCGCCGTGTTGT
GCACACGAGTACAGCATGCGCCGCACAGCCCATCAGTGCGTCGATCTCAT
CAACGTGCATTGTGATCGTTCAAGCTACATGAGCTATACGCTTGCCTCTT
TTAAAAGAGAATTGTTCACCACCTATTGTATAGATGTTTGCTGAGTTGCA
GCACTTTGTGTGTCTCTCTGCAGGCATGCCTGGACACTTGGCTTGCCACA
AAGGGCGTCTGCCCGCTGTGCAAGCAGCCCGTGCACGAGCCTGCGGAGCC
GTGGACATGCAGGTACGTACCTACCTACCCTCTGCGTAGCAACGCTCAGT
ACACTGCCTAGCAACAACCTGGCCGCATGTCGGTACGATACCTACCTACC
CTCTACGTAGCAACGCTCAGCACACTGGCTGGTACCAGTCAGGCTGCAGT
ATGCGGTGTGCAAGCGGTGTTGCATGGCACTTGCTACTGCTTGTGAGCAT
TGCCTAAATTTGTCGGGAGGCACCACGCCTGCACCATCTGTTGAATGCGC
TCAAGCAACCAATGCACGTCATCAGGTTCAGTACTGTATGGCGCTGTGGA
GTGACGCTCAACGTGCACACTGAGCACTGACGCTGTGAAGTGACGCTCCT
CACACACCTGCGCAGGCGTGCGTTGCGCATCGCGGCTACGCTGTGTAATG
ATGTGATGCTCCACAACACGCACTGAGCACTGACGCTGTGAAGTGACGCT
CCACGTGCACACTTGCGCAGGCGCGCATTGCGCATCGCGGCGCAGCCGCT
GCGCGAGTGCTTCTACGAAGTGGCACAGACGCACACGGTGCAGGACCTGC
GGGGGGCGCTGAGGGGGTGGCTGCAGGCCAGAAGACAACGAGCCACAGGC
CATCATCAAGCAGCACCAGCAGCAGCACTAGCAGCAGCGGCCGCAGCAGC
AGCAGCAGCAGCGGCGGCGGGCGCGCAGCAGCAGCCAGCGGCGGCCGCTG
CGCCAGAGGCTTCGCCAGTGTAG
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Coding sequence (CDS) from alignment at Contig_104:339600..343172-

>mRNA_10217 ID=mRNA_10217|Name=jgi.p|Trimin1|351967|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1020bp|location=Sequence derived from alignment at Contig_104:339600..343172- (Tribonema minus UTEX_B_3156 )
ATGCTGTTCTTGGGTTTAGCGGCCCTCCTGGCAGCATGCGTCGCGCACAC
CGTAACTGCCAGTGTAACTGCCAGCATAAATGCAGCAGCAGCAGCGGCCG
CGCGGCATCTGCAGAGCCCGTCCGCCGCCGAACTTCAACCCGAACACTAC
CAGCCAGGGGGGGGGCACGGCGACGACTCCGATGACTCTCCCGCGCAGGA
ACACAAGGAACACTCCCTGTTGAAGAACGTTCTGCTGGGGAGCCTGTACT
CGATCCTCGCGTTCGCGGTGCTGGTGTGCGTCTCGCGCAAGCTCGCGCAG
GCGCGCCAGAACTACGCCGCCGCTGCGGAGCGGCGCCGCAGCGGCGAGCA
CGCGCTGACGAAGGCTGCCATAGACTCGCTGCCCCTGGAGCCCTTCAAGG
CCGCCAAGTGTCCCCCTCCGAGGGGGGGGACGCCCGACCGAGGGCAGGGG
GGGGGCGTCTGTTGCGGCGGCGCTGCGCGCTGCGCCGGTGCAACACCGGC
GGCGGCGGCGGCAGCATCGACGGCGGAAGGGGAGATAAAGGCGGTCAAGT
CATCGCCCGCGGCTCTAGAAGAGGCGCGGGATGTGGATGGCGACGCCATC
TGCGCGGTGTGCCTGTGCGGGTTTGAGAGCGGGGAGATGCTGCGCGTGGT
GCCGCACTGCAACCACCGCTACCACCAGGCATGCCTGGACACTTGGCTTG
CCACAAAGGGCGTCTGCCCGCTGTGCAAGCAGCCCGTGCACGAGCCTGCG
GAGCCGTGGACATGCAGGCGCGCATTGCGCATCGCGGCGCAGCCGCTGCG
CGAGTGCTTCTACGAAGTGGCACAGACGCACACGGTGCAGGACCTGCGGG
GGGCGCTGAGGGGGTGGCTGCAGGCCAGAAGACAACGAGCCACAGGCCAT
CATCAAGCAGCACCAGCAGCAGCACTAGCAGCAGCGGCCGCAGCAGCAGC
AGCAGCAGCGGCGGCGGGCGCGCAGCAGCAGCCAGCGGCGGCCGCTGCGC
CAGAGGCTTCGCCAGTGTAG
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