mRNA_10204 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|351958
Unique Name	mRNA_10204
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|351958 vs. uniprot
Match: A0A835ZK48_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK48_9STRA)

HSP 1 Score: 985 bits (2546), Expect = 0.000e+0
Identity = 555/555 (100.00%), Postives = 555/555 (100.00%), Query Frame = 1

Query:    1 MGGGLDGALTPTNASNTTRSIMDLTTPPRANRHTVDVDRSLKQSSFVVFLYLLSVGVMIPIFPTLLMQESEDRAVTNSFLHFIGTSNLDRCLFAAESSXXXXXXXXXXXXXXXXRAIPXXXXXXXXXXXXXXVASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALRIFKPNLASLLPAVIFIYMASGSVFTWFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMVAARRSFARHHKARGAVSDMDAAEARERGGSHPEMVELLHMPPQ 1665
            MGGGLDGALTPTNASNTTRSIMDLTTPPRANRHTVDVDRSLKQSSFVVFLYLLSVGVMIPIFPTLLMQESEDRAVTNSFLHFIGTSNLDRCLFAAESSXXXXXXXXXXXXXXXXRAIPXXXXXXXXXXXXXXVASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALRIFKPNLASLLPAVIFIYMASGSVFTWFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMVAARRSFARHHKARGAVSDMDAAEARERGGSHPEMVELLHMPPQ
Sbjct:    1 MGGGLDGALTPTNASNTTRSIMDLTTPPRANRHTVDVDRSLKQSSFVVFLYLLSVGVMIPIFPTLLMQESEDRAVTNSFLHFIGTSNLDRCLFAAESSXXXXXXXXXXXXXXXXRAIPXXXXXXXXXXXXXXVASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALRIFKPNLASLLPAVIFIYMASGSVFTWFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMVAARRSFARHHKARGAVSDMDAAEARERGGSHPEMVELLHMPPQ 555

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BLAST of jgi.p|Trimin1|351958 vs. uniprot
Match: A0A173MDR5_9BACT (MFS transporter, DHA1 family, tetracycline resistance protein n=1 Tax=Filimonas lacunae TaxID=477680 RepID=A0A173MDR5_9BACT)

HSP 1 Score: 194 bits (492), Expect = 1.370e-52
Identity = 133/394 (33.76%), Postives = 210/394 (53.30%), Query Frame = 1

Query:  397 VASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALRIFK--PNLASLLPAVIFIYMASGSV-FTWFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMVAARRSFARHHK 1569
            VAS  NG++T    A++F   P++G  SD  GR+P+LLFS      +YL +A +P++  +FV RV+ G+T    T   A I+D+S     A    N G+VGAAFG+ FIIGP               +GG LG I   +P +A+A L   + ++ +++  E+L +E R  F  K A+P+ +L + K  P +A L  +++ IY+AS +V  TW  +   +FGW    IG  L  VGL +A  QG L+R ++PK           + + ++   G  L A+ +T +A ++K WM++A ++  A+G I  P +   +   V  +E G LQGA  S+ +    +G  + SSL A F  +  AP     + PG  +L  +VL++I+   A RSF +  K
Sbjct:   44 VASEYNGWLTFAYAAMQFLCAPLLGNLSDRYGRRPVLLFSLFGFGIDYLFLAFAPSIAWLFVGRVIAGITGASFTTATAYIADISAPEKRAQ---NFGMVGAAFGLGFIIGPT--------------LGGVLGHIGIKVPFYAAAALSLLNWLYGYFILPESLASENRRPFSWKRANPIGSLLLLKKYPTIAGLTSSLVLIYVASHAVQSTWTYYNMLKFGWNEAWIGYSLGFVGLMVALVQGGLIRLVIPK-----------IGQHKSVYTGLLLYALGFTLFAFATKGWMMFAFMVPYALGGIFGPSIQGLISGEVPPNEQGELQGALTSLISATAIVGPPMMSSLFAWFTSKN-APV----QFPGAPFLAGAVLTLISTFLAIRSFRKTQK 404

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BLAST of jgi.p|Trimin1|351958 vs. uniprot
Match: A0A1S2VPE9_9BACT (Tetracycline resistance MFS efflux pump n=1 Tax=Arsenicibacter rosenii TaxID=1750698 RepID=A0A1S2VPE9_9BACT)

HSP 1 Score: 191 bits (486), Expect = 1.030e-51
Identity = 123/392 (31.38%), Postives = 207/392 (52.81%), Query Frame = 1

Query:  400 ASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALRIFK--PNLASLLPAVIFIYMASGSV-FTWFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMVAARRSFARHH 1566
            AS  +G +T     ++F   PV+G  SD  GR+P+LLFS      +Y+   ++PT+ ++F+ R++ G+T    T   A I+DVS     A    N GL+GAAFG+ FIIGP               +GG LG     +P + SA L   +V++  +V  E+L  E R  F  K A+P+ AL   +  P + SL+ +++FIY+A  ++  TW      +F W  + +G+ LA +GL I   QG L R L+PK           + ++++  VG  + AI +  +AL+++ WM++A ++  ++G I+ P L   +  +V A+E G LQGA  S+ ++   +G  + + L + F       P      PG  +   +VL++I+++ ARR+ ++ H
Sbjct:   47 ASRYSGLLTFAYATMQFAFAPVLGGLSDRYGRRPVLLFSLLGFGLDYILQGIAPTITLLFIGRIIAGITGASFTTASAYIADVSPPEKRAQ---NFGLIGAAFGMGFIIGPA--------------IGGLLGQYGSRIPFFVSAGLTLLNVIYGFFVLPESLKPENRRPFSWKRANPVGALAQIRRYPVIISLVASLVFIYIAGHAMQSTWTFITMEQFKWSEKTVGLSLAFIGLMIGIVQGGLSRVLIPK-----------LGQQRSVYVGLMMYAIGFVCFALATQSWMMFAFMVPYSLGGIAGPSLQGIISGQVPANEQGELQGALTSLISLTSIVGPLVMTYLFSFF-----TAPATPFYFPGAPFAAGAVLTIISLILARRTLSKQH 405

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BLAST of jgi.p|Trimin1|351958 vs. uniprot
Match: A0A0R2SDF6_9FLAO (MFS transporter n=2 Tax=unclassified Cryomorphaceae TaxID=253244 RepID=A0A0R2SDF6_9FLAO)

HSP 1 Score: 186 bits (473), Expect = 7.230e-50
Identity = 128/382 (33.51%), Postives = 198/382 (51.83%), Query Frame = 1

Query:  400 ASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALRIFK--PNLASLLPAVIFIYMASGSVF-TWFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMV 1536
            AS   G++       +F   P+VGA SD  GR+P+LLFS      +YL +A +PTL  +FV RV+ G+     T  FA I+DVS     A    N GLVGAAFG+ FIIGP+               GG LG I   +P + +A L   ++ + ++V  E+LP ++R +F+ K A+PL  L   K  P +  L+ +++F+Y+AS +V  TW  F   +F W  +DIG+ L  VG+  AF QG+L+R  +P            +   +  +VG     +    +AL  + WMLYA ++  A G ++ P L   L   V  +E G LQGA +S+ +    +G  + +++ A F  + GAP       PG  ++  ++LS  ++V
Sbjct:   46 ASRYGGWLLFAYAFFQFLFAPLVGALSDRYGRRPVLLFSLLGFGLDYLVLAFAPTLAWLFVARVVSGIFGASFTTGFAYIADVSPPEKRAQ---NFGLVGAAFGLGFIIGPVT--------------GGLLGEIGPRVPFFVAAALTFLNMAYGYFVLPESLPADRRRAFEWKRANPLGTLVALKRYPRVVGLIGSLVFLYIASHAVQGTWSYFTIEKFNWSPKDIGLSLGAVGILSAFVQGFLIRKAIP-----------ALGPWRTLIVGMICNVVGLILFALVQQQWMLYAFLVPYAFGGLAGPALQGLLSNGVPENEQGELQGAMSSMMSATSIVGPPLMTTIFATFT-EAGAPVYF----PGAPFVAGALLSATSLV 394

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BLAST of jgi.p|Trimin1|351958 vs. uniprot
Match: A0A7V4Z0D7_9BACT (MFS transporter n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V4Z0D7_9BACT)

HSP 1 Score: 186 bits (472), Expect = 1.030e-49
Identity = 126/394 (31.98%), Postives = 207/394 (52.54%), Query Frame = 1

Query:  400 ASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYS---LPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALRIFK--PNLASLLPAVIFIYMAS-GSVFTWFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMVAARRSFARH 1563
            AS   G++      ++F   P++GA SD  GR+P++L +      +++   ++P++   F+ R+L G+T    T   A I+DVSK  + A    N G++GAAFG+ FIIGPL                GGL + HY     P + +A L   + ++ +++  E+L  E R +FD K A+P+ +L   +  P + SL  +++FIY+A   +  TW      +FGW + ++G  LA VGLAI   QG L R L+PK           + +  +  +G GL AI +  +A +S+ WM+YA ++  ++G ++ P L   +  +V A+E G LQGA  S+ +V   IG  + + L A F       P  +    G  +L+ +VLS+I+M+ A RS  +H
Sbjct:   45 ASRWGGWLMFTYAGMQFLFSPIIGALSDQYGRRPVILAALFAFAVDFVIQGLAPSIGWFFLGRILAGITGATFTAAGAYIADVSKPEERAQ---NFGIIGAAFGMGFIIGPLL---------------GGL-VSHYEGLRAPFFVAAGLALLNWLYGYFILPESLKPENRRAFDWKRANPVGSLLNLRRYPVILSLTASLMFIYVAGHANQSTWTYITMEKFGWDSREVGFSLAFVGLAIGVVQGGLTRILIPK-----------LGQRNSVFIGLGLYAIGFVLFAFASEGWMMYAFMIPFSLGGLAGPALQGIISNQVPANEQGELQGALTSLISVTSIIGPLLMTYLFAYF-----TAPQASVHFAGAPFLMGAVLSLISMLLAMRSLIKH 403

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BLAST of jgi.p|Trimin1|351958 vs. uniprot
Match: A0A1J5RY08_9ZZZZ (Tetracycline resistance protein, class C n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5RY08_9ZZZZ)

HSP 1 Score: 185 bits (470), Expect = 1.860e-49
Identity = 123/393 (31.30%), Postives = 206/393 (52.42%), Query Frame = 1

Query:  400 ASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALRIFK--PNLASLLPAVIFIYMASGSV-FTWFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMVAARRSFARHHK 1569
            AS   G++      ++F   PV+G  SD  GR+P+LLFS      +Y+    +P +  +F+ R++ G+T G  T   A I+DVS     A    N G++GAAFG+ FIIGP+              +GG LG   + +P +A+A L   + ++ ++V  E+L  E R  FD K A+PL +L   K  P ++ L+ ++ F+Y+A+ +V  TW  +   +FGW    +G  L  VGL +   QG L+R ++PK           +   ++  +G GL AI +T +A +S+ WM++  ++  ++G I+ P L A +   V  +E G LQGA  S+ +    +G  + ++L + F  +    P+     PG   L  ++L+VI+ V+A ++  RH K
Sbjct:   45 ASRYGGWLMFAYAIMQFICAPVLGNLSDKYGRRPVLLFSLFGFGLDYILQGFAPNIGWLFIGRIIAGITGGSFTTAAAYIADVSTPEKRAQ---NFGMIGAAFGIGFIIGPV--------------LGGLLGHYGFRVPFFAAAALALLNWLYGYFVLPESLSKEHRREFDWKRANPLGSLLHLKKYPVVSGLVASITFLYIAAHAVQSTWTYYTMSKFGWDERLVGYSLGFVGLTVGIVQGGLIRIIIPK-----------LGNHKSVYIGLGLYAIGFTLFAFASQTWMMFVFMIPYSLGGIAGPSLQAIISKHVPPNEQGELQGALTSLMSATSIVGPLLMTNLFSYFTSE--KAPV---HFPGAAMLFGAMLTVISTVSAYKTL-RHEK 403

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BLAST of jgi.p|Trimin1|351958 vs. uniprot
Match: A0A1I1T5P9_9BACT (MFS transporter, DHA1 family, tetracycline resistance protein n=2 Tax=Spirosoma TaxID=107 RepID=A0A1I1T5P9_9BACT)

HSP 1 Score: 185 bits (470), Expect = 2.410e-49
Identity = 124/390 (31.79%), Postives = 201/390 (51.54%), Query Frame = 1

Query:  400 ASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALRIFK--PNLASLLPAVIFIYMASGSVF-TWFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMVAARRSFAR 1560
            A+   G+++    A++F   P++G  SD  GR+P+LLFS      +Y+    +PT+  +FV R+L G+T    T   A I+D+S     A    N GL+GAAFGV FI+GP               +GG LG     +P + +A L   + ++  ++  E+LP E R  F+ + A+P+ +L      P +  L+ ++I IY+A  +V  TW  +   +F W  + +G+ LA +GL+ A  QG L R ++PK           + +E++  VG    AI +  +  +++ WM++A ++V A+G I+ P +   +  +V A+E G LQGA  S+ +     G  I ++L + F       P     LPG  + LASVL VI+   ARR F R
Sbjct:   46 AASWGGWLSFSYAAMQFIFSPILGGLSDRFGRRPVLLFSLLGFGIDYILQGFAPTIEWLFVGRMLAGVTGASFTTASAYIADISTPEKRAQ---NFGLIGAAFGVGFILGPA--------------MGGFLGQYGPRVPFFVAAGLSLLNFLYGFFILPESLPAENRRPFNWRRANPIGSLMNLGRYPVILGLVASLILIYIAGFAVQGTWTFYTMEKFKWDEKTVGLSLAAIGLSFAVVQGGLSRIIIPK-----------LGQERSVYVGLAFSAIGFALFGFANQSWMMFAFMIVYALGGIAGPSVQGIISNQVPANEQGELQGALTSLTSTTSIFGPLIMTNLFSYF-----TSPKSPTYLPGAPFFLASVLVVISAYLARRGFKR 402

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BLAST of jgi.p|Trimin1|351958 vs. uniprot
Match: UPI0019897D03 (TCR/Tet family MFS transporter n=1 Tax=Sphingobacteriaceae bacterium TaxID=2021370 RepID=UPI0019897D03)

HSP 1 Score: 185 bits (469), Expect = 2.580e-49
Identity = 129/391 (32.99%), Postives = 198/391 (50.64%), Query Frame = 1

Query:  400 ASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALRIFK--PNLASLLPAVIFIYMASGSVFT-WFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMVAARRSFARH 1563
            AS   G +T     ++F   P+VG  SD  GR+P+LL S      +Y+    +PT+  +FV RVL G+T    T   A I+DVS     A    N GLVGAAFG  FI+GP               +GG LG     +P + +A     + ++ ++V  E+L  E R  FD K A+P+ +L   +  P + SL  +++ IY+A  +  + W  F   +FGW    +G+ LA VGL++   QG L R L+PK           +   +A  VG  L A+ +  +A +S+ WM+YA ++  A+G I+ P L   + ++V  +E G LQGA  S+ +V   IG  + + L + F       P      PG  +L+ +VLSV+++  ARRS  +H
Sbjct:   45 ASRWGGLLTFSYALMQFLCAPIVGGLSDQYGRRPVLLASLFGFGIDYIFQGFAPTIGWLFVGRVLAGVTGASFTTASAYIADVSTPEKRAQ---NFGLVGAAFGAGFILGPA--------------LGGFLGSYGARVPFFVAAGFSLVNCLYGYFVLPESLAPENRRPFDWKRANPVGSLAQLRRYPIILSLAASLVCIYIAGHATQSVWTFFTMEKFGWNETAVGLSLAFVGLSVGIVQGGLTRILIPK-----------LGPNRAVYVGLALYAVGFLLFAFASRGWMMYAFMVPYALGGIAGPSLQGIISSQVPPNEQGELQGALTSLISVTSIIGPLLMTGLFSYF-----TSPQAPIYFPGAAFLMGAVLSVLSVGLARRSLVKH 402

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BLAST of jgi.p|Trimin1|351958 vs. uniprot
Match: A0A7V8W0L0_9BACT (TCR/Tet family MFS transporter n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A7V8W0L0_9BACT)

HSP 1 Score: 185 bits (469), Expect = 3.050e-49
Identity = 123/386 (31.87%), Postives = 199/386 (51.55%), Query Frame = 1

Query:  400 ASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALRIFK--PNLASLLPAVIFIYMASGSV-FTWFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMVAARR 1548
            A+   G++T     ++F   PV+G  SD  GR+P+LLFS      +Y+ ++ +PT+  +FV R++ G+T    T   A I+D+S  +D A    N G+VGAAFG+ FI+GP+              +GG LG     +P + +A L   + ++ ++V  E+LP E R SF+ K A+P  A R  K  P + +L  +   +YMA+ +V  TW  F   +F W  + +G+ L  VGL +   QG L+R++ PK           +  E++  +GFGL AI    +A +S+ WM++  ++   +G IS P L + +   V ++E G LQGA  S+ +    +   I +SL + +   G      +   PG  +LL S L   A + A R
Sbjct:   45 AAKYGGWLTFAYAIMQFLFAPVLGNLSDKYGRRPVLLFSLFGFGMDYIFLSFAPTIIWLFVGRIIAGITGASFTTATAYIADISAPADRAK---NFGMVGAAFGIGFIVGPV--------------IGGLLGQYGARVPFYFAACLTLLNWLYGYFVLPESLPIENRRSFEWKRANPFGAFRQLKKYPAVGALAISFFLVYMAAQAVQSTWAFFNIEKFKWSEKIVGLSLGAVGLLVGLVQGLLIRYINPK-----------IGNEKSIYIGFGLYAIGLILFAFASQGWMMFVFLVPYCLGGISGPALQSIITGHVPSNEQGELQGALTSLISATSILSPVIMTSLFSYYTSAG-----TSVYFPGAPFLLGSFLMFAAGILAYR 397

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BLAST of jgi.p|Trimin1|351958 vs. uniprot
Match: A0A5A8AE37_9FLAO (TCR/Tet family MFS transporter n=3 Tax=Chryseobacterium TaxID=59732 RepID=A0A5A8AE37_9FLAO)

HSP 1 Score: 185 bits (469), Expect = 3.190e-49
Identity = 122/390 (31.28%), Postives = 206/390 (52.82%), Query Frame = 1

Query:  400 ASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALR-IFK-PNLASLLPAVIFIYMASGSVFT-WFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMVAARRSFAR 1560
            A+   G+++      +F   PVVG  SD  GR+P++L S      +Y+ +A++PT+ ++FV RV+ G+T    T   A I+D+S   D A    N GL+GAAFG+ FIIGPL              +GG LG     +P +A+A+L   + ++ +++  E+L   +R  FD K A+P+ +L+ +FK P L+ L+  +  +Y+A  +V + W  F   +F W    +GV L  VGL +A  QG L+R   PK           + E ++  +G G+ AI    +A +++ WM++A+++   +G I  P L + +   V A+E G LQGA  S+ ++   IG  + +SL  +F  +  +      + PG  + LA +L  +++V    +F R
Sbjct:   47 AAKYGGWLSFAYAFTQFVFSPVVGNLSDKYGRRPIILISLFGFTVDYIFLALAPTIWLLFVGRVIAGITGASFTTASAYIADISTDEDRAK---NFGLIGAAFGLGFIIGPL--------------IGGALGHFGARMPFYAAAVLCLLNFLYGYFILPESLDKNKRREFDWKRANPIGSLKFLFKHPELSGLVATLFLVYVAGHAVQSNWSFFTMGQFKWTEFTVGVSLGVVGLLVALVQGVLIRWTAPK-----------LGEYKSIYIGLGMYAIGMLLFAFATEGWMMFAILIPYCLGGICGPSLQSVITKNVAANEQGELQGALTSLMSITSTIGPPLMASLYYQFSKEDSSL-----KFPGAPFFLAFILMSVSVVMTYFNFKR 403

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351958 vs. uniprot

BLAST of jgi.p|Trimin1|351958 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZK48_9STRA	0.000e+0	100.00	Major facilitator superfamily domain-containing pr...	[more]
A0A173MDR5_9BACT	1.370e-52	33.76	MFS transporter, DHA1 family, tetracycline resista...	[more]
A0A1S2VPE9_9BACT	1.030e-51	31.38	Tetracycline resistance MFS efflux pump n=1 Tax=Ar...	[more]
A0A0R2SDF6_9FLAO	7.230e-50	33.51	MFS transporter n=2 Tax=unclassified Cryomorphacea...	[more]
A0A7V4Z0D7_9BACT	1.030e-49	31.98	MFS transporter n=1 Tax=Bacteroidetes bacterium Ta...	[more]
A0A1J5RY08_9ZZZZ	1.860e-49	31.30	Tetracycline resistance protein, class C n=1 Tax=m...	[more]
A0A1I1T5P9_9BACT	2.410e-49	31.79	MFS transporter, DHA1 family, tetracycline resista...	[more]
UPI0019897D03	2.580e-49	32.99	TCR/Tet family MFS transporter n=1 Tax=Sphingobact...	[more]
A0A7V8W0L0_9BACT	3.050e-49	31.87	TCR/Tet family MFS transporter n=1 Tax=Chitinophag...	[more]
A0A5A8AE37_9FLAO	3.190e-49	31.28	TCR/Tet family MFS transporter n=3 Tax=Chryseobact...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_104	contig	Contig_104:236026..244076 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|351958\|estExt_Genemark1.C_Ctg_1040043
KEGG TC	2.A.1.2.38,2.A.1.2.39,2.A.1.2.4,2.A.1.2.41,2.A.1.2.68,2.A.1.2.75
BRITE	ko00000,ko00002,ko01504,ko02000
KEGG Module	M00668
KEGG ko	ko:K08151
Preferred name	tetA
Description	Major facilitator superfamily
COG category	EGP
Max annot lvl	976\|Bacteroidetes
EggNOG OGs	COG0477@1\|root,COG2814@2\|Bacteria,4NFM7@976\|Bacteroidetes,47N08@768503\|Cytophagia
Evalue	1.16e-49
Seed ortholog	1123277.KB893181_gene2250
Hectar predicted targeting category	other localisation
TranscriptId	352280
Track	FilteredModels1
ProteinId	351958

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351958	gene_10204	Tribonema minus UTEX_B_3156	gene	Contig_104 236026..244076 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351958	Trimin1\|351958\|estExt_Genemark1.C_Ctg_1040043	Tribonema minus UTEX_B_3156	polypeptide	Contig_104 236026..244066 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_10204_1	exon_10204_1	Tribonema minus UTEX_B_3156	exon	Contig_104 236026..236199 +
exon_10204_2	exon_10204_2	Tribonema minus UTEX_B_3156	exon	Contig_104 237340..237513 +
exon_10204_3	exon_10204_3	Tribonema minus UTEX_B_3156	exon	Contig_104 237713..238045 +
exon_10204_4	exon_10204_4	Tribonema minus UTEX_B_3156	exon	Contig_104 239037..239090 +
exon_10204_5	exon_10204_5	Tribonema minus UTEX_B_3156	exon	Contig_104 239643..239684 +
exon_10204_6	exon_10204_6	Tribonema minus UTEX_B_3156	exon	Contig_104 240244..240417 +
exon_10204_7	exon_10204_7	Tribonema minus UTEX_B_3156	exon	Contig_104 241385..241455 +
exon_10204_8	exon_10204_8	Tribonema minus UTEX_B_3156	exon	Contig_104 242026..242146 +
exon_10204_9	exon_10204_9	Tribonema minus UTEX_B_3156	exon	Contig_104 242196..242225 +
exon_10204_10	exon_10204_10	Tribonema minus UTEX_B_3156	exon	Contig_104 242849..243046 +
exon_10204_11	exon_10204_11	Tribonema minus UTEX_B_3156	exon	Contig_104 243770..244076 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_10204	CDS_10204	Tribonema minus UTEX_B_3156	CDS	Contig_104 236026..236199 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_10204	UTR3_10204	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_104 244067..244076 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_104:236026..244076+
coding sequence from alignment at Contig_104:236026..244076+

spliced messenger RNA

>mRNA_10204 ID=mRNA_10204|Name=jgi.p|Trimin1|351958|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1678bp|location=Sequence derived from alignment at Contig_104:236026..244076+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGAGGTGGGCTAGACGGAGCGCTCACCCCCACAAATGCTAGCAATAC
TACTCGCTCCATCATGGACTTGACCACCCCTCCTCGCGCCAACCGGCACA
CTGTGGACGTGGATAGAAGCCTCAAGCAATCGTCCTTCGTCGTTTTCCTG
TATCTATTGAGCGTGGGAGTCATGATCCCCATCTTCCCCACGCTGCTGAT
GCAGGAGTCGGAGGACCGCGCCGTCACAAATTCATTTTTGCACTTCATTG
GCACTTCAAACCTCGACCGTTGCCTCTTCGCTGCTGAATCATCCGTGCAG
ATCCCCATCTTCCCCACGCTGCTGATGCAAGAGTCGGAGGACCGCGCCAT
CCCCATCTTCCCCACGCTGCTGATGCAAGAGTCGGAAGACCGCGCAGTCG
CGAGCGTGCAGAACGGCTACATGACAGTGGGCAAGTGCGCGCTGGAGTTC
TTCGTCATGCCGGTCGTCGGCGCGTGCAGCGACCACGTAGGCCGCAAGCC
GCTGCTGCTGTTCTCTGCGGCGGTGGCGCTGGCGGAGTATCTGGCCATGG
CGGTGTCGCCGACGCTGCCGGTGATATTCGTCACGCGCGTGCTGGGCGGC
ATGACGAACGGCATCACCACCATGATTTTCGCCGCCATCAGCGACGTGAG
CAAGAAGTCCGACGAGGCCAACGTCGCGAATAACATGGGGCTGGTAGGTG
CTGCATTTGGCGTGGCGTTCATCATCGGGCCGCTGGAGTTCAACTTCTAT
GTGCCGCATCCGCGCCCCGTGCTGCTGGTCGGCGGCGGTCTCGGCATGAT
CCATTACTCGCTGCCATGCTGGGCATCAGCAATGCTCATGGCGGCGGACG
TAGTGTTCCTGCACTATGTGTGGCAGGAAACGCTGCCGACAGAACAGCGC
ACCAGCTTTGACATCAAGAACGCCAGCCCGCTGCCCGCGCTGCGCATATT
CAAGCCAAATCTGGCCAGCTTACTGCCGGCGGTCATTTTCATCTACATGG
CGTCTGGCAGCGTATTTACGTGGTTTATTTTCGTGGATTTTCGTTTCGGT
TGGAAAGCTGAGGACATTGGGGTGTACTTGGCGTGCGTGGGCCTCGCTAT
TGCGTTCACGCAGGGGTACCTCATGCGCCACCTAGTACCCAAGGGGTACC
CCATGCGCCACCTTGTACCCAAGGTGGTGAGTGAGGAACAGGCGACGGTG
GTGGGATTTGGCCTACGCGCCATCGCATACACGGGCTACGCGCTCAGCAG
CAAGCCCTGGATGCTATACGCACTCATCATGGTGGACGCCATGGGCAGCA
TCAGCGACCCGTGCCTGAGCGCTGCCTTGGTGGCGCGAGTCGACGCGCAC
GAAGTGGGGGCGCTGCAGGGGGCGGCGGCAAGCGTGAAGACTGTCATGCA
GGGCATCGGCTCCTTCATCTTCAGCAGCCTGCTGGCGAGGTTCATAGGGC
AGGGGGGCGCCCCCCCTTTGCTAAATGGCAGGTTGCCCGGGGGGCACTGG
CTGCTGGCCTCAGTGCTCAGCGTGATTGCCATGGTGGCAGCGCGCCGCAG
CTTCGCGCGCCATCACAAAGCAAGAGGCGCAGTTTCGGACATGGATGCTG
CGGAAGCGCGTGAGCGCGGCGGGAGTCACCCCGAGATGGTCGAGCTGCTG
CACATGCCCCCGCAATGACAGCGGTTAC

protein sequence of jgi.p|Trimin1|351958

>Trimin1|351958|estExt_Genemark1.C_Ctg_1040043 ID=Trimin1|351958|estExt_Genemark1.C_Ctg_1040043|Name=jgi.p|Trimin1|351958|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=556bp
MGGGLDGALTPTNASNTTRSIMDLTTPPRANRHTVDVDRSLKQSSFVVFL
YLLSVGVMIPIFPTLLMQESEDRAVTNSFLHFIGTSNLDRCLFAAESSVQ
IPIFPTLLMQESEDRAIPIFPTLLMQESEDRAVASVQNGYMTVGKCALEF
FVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGG
MTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFY
VPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQR
TSFDIKNASPLPALRIFKPNLASLLPAVIFIYMASGSVFTWFIFVDFRFG
WKAEDIGVYLACVGLAIAFTQGYLMRHLVPKGYPMRHLVPKVVSEEQATV
VGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAH
EVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHW
LLASVLSVIAMVAARRSFARHHKARGAVSDMDAAEARERGGSHPEMVELL
HMPPQ*

mRNA from alignment at Contig_104:236026..244076+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_10204 ID=mRNA_10204|Name=jgi.p|Trimin1|351958|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8051bp|location=Sequence derived from alignment at Contig_104:236026..244076+ (Tribonema minus UTEX_B_3156 )
ATGGGAGGTGGGCTAGACGGAGCGCTCACCCCCACAAATGCTAGCAATAC
TACTCGCTCCATCATGGACTTGACCACCCCTCCTCGCGCCAACCGGCACA
CTGTGGACGTGGATAGAAGCCTCAAGCAATCGTCCTTCGTCGTTTTCCTG
TATCTATTGAGCGTGGGAGTCATGGTGAGTTGTGCTTTGCTGCTGATTTT
CAAGCAGAATCGTATCACACACCATGGTACGCTGCAAGAATAAAGTGGCA
TGTTATTATTTGTAGGGAGTTTCACACCCGCACTGGCTTCAGCCTTGAAT
AAAGCTTCACAGTGACAGCACGTGCGAGAGACGAGAGACGTCGTGATATA
CTGTTGTTTGGGGGAGCTGACTGACGTCAGTTGCGGCTGCACAGCTCATT
GCACCATCACACCAAGTACTGCACTATTTACATCCCACCCTTCAGCTGGT
ACATGTGAGTTCTGAATTGCAAACCTGGAGTTGAAGGTGTTGCAGAGAGC
TGCGAACGTCAATCATCAACGATGTACATCGGGGCAAGCACGCGCCTATC
GACGACATCAACAGCTCCTGCATGAGGCTATGGCTTTGATGTTAAGCAGC
GCTCAATACCAGACGATTGCAGGCATGTCAATGCTGCCGTTGACCTAGTT
ATCAGCCGCAGCAGCTCAGCTGTGTCAGGTGCCAAGTTATTACGCATGAT
GGGTGACGGTACACTTCAGTCTGTTGAGCAGACTACGGTCCCGCCGTTGG
TTGGGTTGAGGTAGCACCCGCACACTTTAATTGCAAGTCGTTGCAGCCAG
GATCGACTTTCACAGACCTGATCGGTGCAGAGGTTGGACATGGAGCGAGG
AAAGCAAGCACGCAAAGCGCAAAGAGCAATTGCTGCACATTTCTGGGCCT
GTTGCGGCTGACGAGACCTTTTCTCCAGGAAATTCAAGGCAAAGAATGCG
CTTTGGCGCTCAATTTGTAGAGTCAGCACTTTTGTACCAGGATTCAACAA
AGCAAAGCTGGGATGACGCTGCTTCATGTTGTCAGCCTTGGTGGCATCAT
GGTGCGTTGGCCAAGTGAATAACTTCAAGTGGTATGGCCCGCACCCAGCC
TAACCCTAACCCTAACCCTAACCTATCCTGATCTAGCACCAACACTGTTG
CTGCGAGCTGCAACAGTGGCGGCTGCTCATCGGACGGTGCACACAAATCT
GCCAACTTCATGCTGCTGATGCAAAAGTCGGAGGACCGCGCCGCCGCAAG
TTGACGTTTCGTACTTCAAAGCTCAAGTGTTGACTCTCCGCTGCGCACTC
ACCCGCGCGCGCAGATCCCCATCTTCCCCACGCTGCTGATGCAGGAGTCG
GAGGACCGCGCCGTCACAAATTCATTTTTGCACTTCATTGGCACTTCAAA
CCTCGACCGTTGCCTCTTCGCTGCTGAATCATCCGTGCAGATCCCCATCT
TCCCCACGCTGCTGATGCAAGAGTCGGAGGACCGCGCCGTCGCAAGTTCG
TCTTTGCACCTCACTTGCACATCAAACCTCAAATGTTGACTCTCCCCAGC
GCACTCATCCATGCACACAGATCCCCTTCTGCCCCACGCTGCTGATGCAA
CAATTGGAGGTCCGTGCCGTAGCAAGTTCACTAATTCTTTGTTGAAAGTT
TAAATGTGGACTCTCCGCTGCGATCCCACGCGTGCAGATCCCCATCTTCC
CCACGCTGCTGATGCAAGAGTCGGAAGACCGCGCAGTCGCGAGCGTGCAG
AACGGCTACATGACAGTGGGCAAGTGCGCGCTGGAGTTCTTCGTCATGCC
GGTCGTCGGCGCGTGCAGCGACCACGTAGGCCGCAAGCCGCTGCTGCTGT
TCTCTGCGGCGGTGGCGCTGGCGGAGTATCTGGCCATGGCGGTGTCGCCG
ACGCTGCCGGTGATATTCGTCACGCGCGTGCTGGGCGGCATGACGAACGG
CATCACCACCATGATTTTCGCCGCCATCAGCGACGTGAGCAAGAAGTCCG
ACGAGGCCAACGTCGCGAATGTGAGTACTGCGTAGTACACCTCGTGGACT
GTGTATTCTGTGATGGTCATCACCATCATGACGTTTTCGCCGCCATCAGC
GACGTGAGCAAGAAGTCCAACGAGGCCAACGTCGCCATATGAGTACAGTG
TAGTACACCTTGTGGACTATGTGTACTCTGTGAGCTTGCCGGTCATCAAC
GATGTGGTTGAGAGGTCTCACATACAAGGCCAACGTCGCAAATGTGAGTA
CAGCGCAGTACACCTCGTGGACTGCCTGACGACCAAGGTCGTTTTGTAGC
AATCAGGTATGCACTTAACAAGGAAGTTCAACGAGGCAGGTCCAAAGTGC
AACGAGCGGCCGTCGCGGCCGTCGCGAATGTCAGTACCGCAAACTGATTC
AATATCGTGTCAACGCTCTGGTGACCATTCTGCTTGCAACGAACTGCATG
ACTCCAAGAAAACCCAGGCAGCAATGACGCGACTATGATAATAGTGATCC
CTACCCCTAACCCTACGTGGCCTGCGCTGCTGTGCACTGTCATAATTCAA
CAGGCCCCATGATTTCGATGCGTTGTCATGAGCGCAAGTATCGCAGCCCA
CTACATTAATCTTAATGCGATGCGGTACGTATCGTACATCACACCACAAC
AGCCATGACGTCTGAGGCGAAATCATTTGAGTCTGCCAGTGCGACGACTG
CTTGCGCACCGATTCGCAACGCTCGTCGAGGAGGCTAATGAGCTGGTTTT
GCTTGAGTCATATCATGCACTGTCCTTTACAGTGCCTCTAGATTCGGTAT
GTGTGTGTCTGGTCAACCAGTTTGTATCCCCTGATATGTCTAGGCCTGAG
CACTGTCCCTGGGGTTAGGGTTGGTGGTAGGGCTGGGACCAGGCTGAGGA
GTAGGTTTACACAAGCACCACTGTAATGCTCCGGTTCAACAGCCTGCCGC
ACAACCATGTAACACTCACGCCGTTTATGCTCTCTTGCGCCGTTAATGGT
CTCTTTTGCAGAACATGGGGCTGGTAGGTGCTGCATTTGGCGTGGCGTTC
ATCATCGGGCCGCTGGTGAGTGCTCGCCTGGCTTGAAGTTGGCACTTGAA
GTAGGACATCACGTGTGTGTGTGCGCACATTGCATGACAGACACGACAGC
TGATGGACTACATAATTATGTGGCATCAAAATGTCGTAGGATGGAAGTAG
TAGGCTATTTACTACCAACAACATGCCTGACTGATGGTTGGTTGACACAA
GTGTGCTTGAAGGTCTACATGAACGGAAACTAAGCCCAATCGATTGACAA
TTTTCACTTTTTGGCCACCCTAGGCACAGCAAAAGAGTACAGCACGGAGG
CTTCCCACGTGGTCCCCCACCGTAGTACTAGCTCCGCTCAAGAGGGCTTA
ACTTCAGCGATCGGACGAGAGCTGGTGCTGTCACCATGATATGGCCGTAC
CCACATGCAAGGTGGTTGCAGCAAATGTGGCCCTCCTTGTGCACAGTGTG
TGGGGGGAACCAGATGCTATGCTAGTGGCACAGTCACACATGCTCGTCAG
GCAGGCGCGGCGGCCTTGGCGTGTTCAACTCTCATTTGCCAATTGTCATT
TTGCTGATGGCTTGCAGGAGTTCAACTTCTATGTGCCGCATCCGCGCCCC
GTGCTGCTGGTGGCGTCCGACAAGCCAATCTGGTGCTTGTCAGCGCAATG
CGTCACTCGAAGTCTCTCATTCGCTCACGCAATCACCCACGCACTCATAC
GCCATGCGCGCACGAGTCATTGTGAATGACTCCATAACTCACTTACATGC
CAGGTCGTCAGCGCGCTCGGCATGCGGCGCTGCTGACTCACTCAATCACA
CACTTACTCACTCACTCACTCACCTGCTGCGCATCGCCGCGCCAGGTTGG
CTGCAGTCATTGCATGATCCACTACTCGCTGCCGTGTTGGGGCATCGGCG
GTGCTCATTGACTCAATCACTCATTACTCACTCACTCACTCACTCACGCA
CATGCCAGGTCGGCGGCGGTCTTGCCATGAATTAATCCTTGCTATCATGC
TGGGCGTCGGCGGCGCAGATTGACCCAATCACTCACTCACTTACTCACTC
ACGCGCATGCCAGGTCGGCGGCGGTTTCGGCATGATCCACTACTCGCTGC
CGTGTTGGGCTTCGGCAGTGCTGAGTGACTCAATCACTCACTCACTTACT
CACTCACGCGCACGGCAGGTCGGCGGCGGTCTCGGCATGATCCATTACTC
GCTGCCATGCTGGGCATCAGCAATGCTCATGGCGGCGGACGTAGTGTTCC
TGCACTATGTGTGGCAGGAAACGCTGCCGACAGAACAGCGCACCAGCTTT
GACATCAAGAACGCCAGCCCGCTGCCCGCGCTGCGCATATTCGTAGAGGC
GAGTACAGGCTGTGCTGATGGGTACCATTGTACTCGAGAGTCTGACTCGT
ATTCTGAATGATTCTCTATGTGAAGTCTGTTGTTAGAGTACATGACATGT
ACGATGGGGGCTTTGACATCAAGAATGACAGCCCGCTGCCCGCGCTGCGC
ATTCGTAGAGGCGAGTATGAGCCGTGCTGCCGGGTACTACTATAATGAAA
ACGAATCAAAAGATCGTAGAGCTATATACTCTAGAACGAGACTCGCATCT
TGAAATACTCTCTATGTAGAGTCTGGTGTTGGAGTACTACATGCACTATG
GGGGCTTTGACATCAAGCGCGCAAGTTCGCTGCCTGCGCTGCGCATACTT
GTAGAGGCGAGTGTGGCATCGCGCATACTGCTCCGTGCGTACATTGCTAG
TTTGATGCATACTTCAATGTACCATAGTCTTATAAATAGTATTATTACTC
TGCATATACAGCACAATGTGCACAATGTGGCCTATTTTCAAGAAGCAGGT
GGAACATGCAACATATTTCAAGTGACATGCTAGACATGCTTAAAAGGCTC
ACTTTTTGAGTATACACATATGAAGCATGAGTGCGAACATATTGCGAGCA
CAGGCAAGGAACAGCAGATACACAAGTCCATGAGCTTGTTTGCTTTGAAG
TGGACTGCACTGCCACATGCACAGCGACTTGCAGTTGAAGCTGAAACATG
CAATATTTTGAACAAGCTGTCGCGACACTGCGTGCGGTTGTGGTTCAAGT
TGCAATTGTCAATTGTGAACATGGGGCGTGCGGCATTGTGTGCCCAACTG
CGTGCGTCACATGTCACTGTATTGCTTAGCAGAATGGTGCCGGACTGGCC
TTTCTGGATCTGTTTTCGATGCCTGCAGAAACGCTCACAGTATGCGTGAT
TGACAAGCCGCTTCAGTGAACTCAATCATGACTGCACCGTTGCTCGTGTT
GTTGAGCAGAAGCCAAATCTGGCCAGCTTACTGCCGGCGGTCATTTTCAT
CTACATGGCGTCTGGCAGCGTATTTACGTGGTGAGTGCATACGTACATAC
GGTATACGTACCCCATTGCGTTGACGTAGAGCATCAGCAGTGATGATGCA
GAACCCTGTTCATAAAAGTCTTGGGTTCTCAAAGGGGGTGGTGTCGTGGG
GGGCTTGAATGCGTGTGCGTCAACCGACTATCAGGGGTACTTCTAAGGAG
TGTATGGATTCTGGATGTTGCCAGCAGGGACTCTCTTCATGCCTGTGCAG
GGATCCGCATGTCTGCAGTCATGGAGTGCGCTTGTGATAAGAACTCACTG
CGTCTCGTGCGTTGTGATTTTAAGCTCTGTTGAGGCCCCATGCAGTTGCG
CAAAAGCTGCAGCACCCACGTCTCCGCTGTTCACCACCCATGCGCAACTT
CAAATTGAAGTTAGACCTGCCAGTTTTACGTACCCATTTGTCAGCCACCG
CCTGTGGTTGTACTCAAGCACACGCCTGTTCCTACGCGCTTGGCGTCAAC
TTCAAATTGAGGTTAAACTTGACAGTTATGTACTCATTGTAAGCCACCAG
CTGTGGTTGCACTCAAGCACACGCCTGTTCCCATGCGCACGGCGTCGCAG
GTTTATTTTCGTGGATTTTCGTTTCGGTTGGAAAGCTGAGGACATTGGGG
TGTACTTGGCGTGCGTGGGCCTCGCTATTGCGTTCACGCAGGGGTACCTC
ATGCGCCACCTAGTACCCAAGGTGGGTTGAAGTTGAACTAGATGTTGAAC
TTGCTATCGCGTTCACGCAGGGGTACCCCATGCGCCACCTTGTACCCAAG
GTGAGTGGAAGTTGAACTAGATGCTGAATTTGATGCCGCGCTGTGCTCAA
GCACTCGTGGCAGTGTGTACTGAGAAATGAATTGTCTTCAGACTGATGGC
ACTTCTATGCTGCAGTGAGATGATGAACTTTGGCCGGACATGCTGTATTG
TGCCCGAAAGGGTGTGCGATGGCATGCAATGAAGCAATAAGGCACGCTTC
ACATATTGCTGAGGTATCGCATGCACTATTTGGCCTGCAAAGTGCTATGC
GACCCTTGACCTGCGTCATGCACATGAGCCAATTGCAGTCGCCTGGCTTT
CATGCCACTTCTGCAGCGTGGGATTATCGCAACTGTGCCTATGACGTGCT
TGAGGCATGGTCAGCACACCACACATGCACGCTAGCATGTACATGAACAA
CCTTGCTCACATTTCTGGCGCGAACACGACATGCGCCTTCCTCGCAATTT
TGGTCCTGTCTACTTCTCAGGTGATGACCGAGGAAACAGGCTACGGTAGT
GGGATGGTGTACATACGTATGCCAACGGCACTGCATACTTCTGCAGACTT
GCTATTAGTTTTTCCAATCATGGTAGTACTACGCTGCTGACCTGCTGCCA
ACATGTACCCGCTATACCTGCAGGTGGTGAGTGAGGAACAGGCGACGGTG
GTGGGATTTGGCCTACGCGCCATCGCATACACGGGCTACGCGCTCAGCAG
CAAGCCCTGGATGCTATACGCACTCATCATGGTGGACGCCATGGGCAGCA
TCAGCGACCCGTGCCTGAGCGCTGCCTTGGTGGCGCGAGTCGACGCGCAC
GAAGTGGGGGCGCTGCAGGGGGTGAGCATCCGCTGCTGCTGACGTGGCAA
CGTTGGGAGTGTGAGCACGTCTGCGCAATGTGTGTCAGCGGGCCCATGAG
CGTATTCACTGTTAGTTGACGTCCGTAAATGAGGAAGTTCGCGCATTTTC
TCAGCGTCCCATGCCTGATGAAGGGGGGGGGGGGCTGCAGGGGTGAGGAT
TTGTAAGCGACTTCGTTTGCTTGTCTGCTGCCGTCGTGCCAGTGCGTGAA
CCACAAAGCACTCTTCAAAGAAAAACATGCATCACGCATATAAAATGGGC
CTTGCAGGGCCTGAGCGTTCGATCAGGGGCGCTGCAGGGGTGAGCAATTG
CCTAACCCTAACCCTAACCCTAATTACCTAACCTTAAGCTTCGTTCGCTC
ATCGATTGTTGTTGTGCCAATGCGTGGATCACGAGCACCTCTATATGACA
TGCATAATGCGTTTAAAACCAGAGCTGCGGGGAGTGAGGGTTTGCTATCA
GTCTGTGAGGCAGTGCATTTGTATTTTTCAACAGTCTCGGCGCGGCAGCA
GTCAGCGCTAATGTCCTTCACAAGCCTGGGTGCTACCTACCTCACCTGCA
GTGCCCTGCTGTAGAAACCATCTGATCTCGAAGCCTGTTTCCGGGCCACA
CTCACCCCCCTGTGCCTCATCTGCCCATGGCTGCGCACATGAATTGCTTT
TACAGACAAGAAACATGCTTTTTTCTGACATGCAATTCCCGCAGGCGGCG
GCAAGCGTGAAGACTGTCATGCAGGGCATCGGCTCCTTCATCTTCAGCAG
CCTGCTGGCGAGGTTCATAGGGCAGGGGGGCGCCCCCCCTTTGCTAAATG
GCAGGTTGCCCGGGGGGCACTGGCTGCTGGCCTCAGTGCTCAGCGTGATT
GCCATGGTGGCAGCGCGCCGCAGCTTCGCGCGCCATCACAAAGCAAGAGG
CGCAGTTTCGGACATGGATGCTGCGGAAGCGCGTGAGCGCGGCGGGAGTC
ACCCCGAGATGGTCGAGCTGCTGCACATGCCCCCGCAATGACAGCGGTTA
C

Coding sequence (CDS) from alignment at Contig_104:236026..244076+

>mRNA_10204 ID=mRNA_10204|Name=jgi.p|Trimin1|351958|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1668bp|location=Sequence derived from alignment at Contig_104:236026..244076+ (Tribonema minus UTEX_B_3156 )
ATGGGAGGTGGGCTAGACGGAGCGCTCACCCCCACAAATGCTAGCAATAC
TACTCGCTCCATCATGGACTTGACCACCCCTCCTCGCGCCAACCGGCACA
CTGTGGACGTGGATAGAAGCCTCAAGCAATCGTCCTTCGTCGTTTTCCTG
TATCTATTGAGCGTGGGAGTCATGATCCCCATCTTCCCCACGCTGCTGAT
GCAGGAGTCGGAGGACCGCGCCGTCACAAATTCATTTTTGCACTTCATTG
GCACTTCAAACCTCGACCGTTGCCTCTTCGCTGCTGAATCATCCGTGCAG
ATCCCCATCTTCCCCACGCTGCTGATGCAAGAGTCGGAGGACCGCGCCAT
CCCCATCTTCCCCACGCTGCTGATGCAAGAGTCGGAAGACCGCGCAGTCG
CGAGCGTGCAGAACGGCTACATGACAGTGGGCAAGTGCGCGCTGGAGTTC
TTCGTCATGCCGGTCGTCGGCGCGTGCAGCGACCACGTAGGCCGCAAGCC
GCTGCTGCTGTTCTCTGCGGCGGTGGCGCTGGCGGAGTATCTGGCCATGG
CGGTGTCGCCGACGCTGCCGGTGATATTCGTCACGCGCGTGCTGGGCGGC
ATGACGAACGGCATCACCACCATGATTTTCGCCGCCATCAGCGACGTGAG
CAAGAAGTCCGACGAGGCCAACGTCGCGAATAACATGGGGCTGGTAGGTG
CTGCATTTGGCGTGGCGTTCATCATCGGGCCGCTGGAGTTCAACTTCTAT
GTGCCGCATCCGCGCCCCGTGCTGCTGGTCGGCGGCGGTCTCGGCATGAT
CCATTACTCGCTGCCATGCTGGGCATCAGCAATGCTCATGGCGGCGGACG
TAGTGTTCCTGCACTATGTGTGGCAGGAAACGCTGCCGACAGAACAGCGC
ACCAGCTTTGACATCAAGAACGCCAGCCCGCTGCCCGCGCTGCGCATATT
CAAGCCAAATCTGGCCAGCTTACTGCCGGCGGTCATTTTCATCTACATGG
CGTCTGGCAGCGTATTTACGTGGTTTATTTTCGTGGATTTTCGTTTCGGT
TGGAAAGCTGAGGACATTGGGGTGTACTTGGCGTGCGTGGGCCTCGCTAT
TGCGTTCACGCAGGGGTACCTCATGCGCCACCTAGTACCCAAGGGGTACC
CCATGCGCCACCTTGTACCCAAGGTGGTGAGTGAGGAACAGGCGACGGTG
GTGGGATTTGGCCTACGCGCCATCGCATACACGGGCTACGCGCTCAGCAG
CAAGCCCTGGATGCTATACGCACTCATCATGGTGGACGCCATGGGCAGCA
TCAGCGACCCGTGCCTGAGCGCTGCCTTGGTGGCGCGAGTCGACGCGCAC
GAAGTGGGGGCGCTGCAGGGGGCGGCGGCAAGCGTGAAGACTGTCATGCA
GGGCATCGGCTCCTTCATCTTCAGCAGCCTGCTGGCGAGGTTCATAGGGC
AGGGGGGCGCCCCCCCTTTGCTAAATGGCAGGTTGCCCGGGGGGCACTGG
CTGCTGGCCTCAGTGCTCAGCGTGATTGCCATGGTGGCAGCGCGCCGCAG
CTTCGCGCGCCATCACAAAGCAAGAGGCGCAGTTTCGGACATGGATGCTG
CGGAAGCGCGTGAGCGCGGCGGGAGTCACCCCGAGATGGTCGAGCTGCTG
CACATGCCCCCGCAATGA