mRNA_1000 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|156751 vs. uniprot
Match: A0A835ZL00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL00_9STRA) HSP 1 Score: 1615 bits (4183), Expect = 0.000e+0 Identity = 931/931 (100.00%), Postives = 931/931 (100.00%), Query Frame = 1
Query: 1 MVDAASAIVSADSQPGVRQLARHLYLYSVRIGSTFNLYVEYCAAAACVVITLDFSRSDNIVIEGADCKETAAHSLQATATAYPFTRTLVARLRVDDRHRPAVLRNECSWELQPLRNSEALTAAAVEREDAAAALLARTTQLLRQHDFSASTSPADALVQACTTHGIHFIDHAFPPTSSSLGSGFDGVPIVWRRASDLVPPGSNNNCSSAHSLPPILPADLRPSDLRAATALENAEPDFACALRALAEKPQLVAALLANQPRGGRRAGVYSVVTYQGGIRRALLLDDFFPCHAGVAGGPCVTRCHGDALWPLLLEKALAKLAGGYTRALSRGYSTSASTQMLHALVDLTGAPYHRIRLDGDAWQPTDVWRSLCDWQSSGWLIVACTHSTSXXXXXXXXXXXXXXSPTVGXSGKRGGESRAGGLLLDYAYTVLGCRDLGGDRVVKLRGPLQLGAWEGITPAESVAGGLDAEQRTAGDEVRQALSLICRDCTDAFYVPLSHLPRHFGTLAVIMARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAPGEANIVPNAAAAQVYISVHQGDARAXXXXXXXXXXXGGYMDMGVTVLRVRPDFALEAVACSGDVVARQVQIGAVLSPGSYLVVPTSTGHHLLQQCRSTAQXXXXXXXXVPPAPLLTQDGKAFSPQLEAALSAVFEDLDADCDGVLSREELAGFLAATEGAALEDGAHAWLLSHFDSRDGGLTRAGLLQAYRFMWQDAGRDARVLTRDLRRFGFDARALSRAAAPRSAAAALVVHASAPFALAPHAAARDAQRLLDAAWRLPMTALGKCEEVVAQEGGRRARVWWLEAQGGRGLSVAVENCXXXXXXXXXXXXALRAVVDCSGSVNVVSSAGAVAAEAVVRPGEMALIHRLVAVDQGGGDVHIEWTHSIQWL 2793
MVDAASAIVSADSQPGVRQLARHLYLYSVRIGSTFNLYVEYCAAAACVVITLDFSRSDNIVIEGADCKETAAHSLQATATAYPFTRTLVARLRVDDRHRPAVLRNECSWELQPLRNSEALTAAAVEREDAAAALLARTTQLLRQHDFSASTSPADALVQACTTHGIHFIDHAFPPTSSSLGSGFDGVPIVWRRASDLVPPGSNNNCSSAHSLPPILPADLRPSDLRAATALENAEPDFACALRALAEKPQLVAALLANQPRGGRRAGVYSVVTYQGGIRRALLLDDFFPCHAGVAGGPCVTRCHGDALWPLLLEKALAKLAGGYTRALSRGYSTSASTQMLHALVDLTGAPYHRIRLDGDAWQPTDVWRSLCDWQSSGWLIVACTHSTSXXXXXXXXXXXXXXSPTVGXSGKRGGESRAGGLLLDYAYTVLGCRDLGGDRVVKLRGPLQLGAWEGITPAESVAGGLDAEQRTAGDEVRQALSLICRDCTDAFYVPLSHLPRHFGTLAVIMARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAPGEANIVPNAAAAQVYISVHQGDARAXXXXXXXXXXXGGYMDMGVTVLRVRPDFALEAVACSGDVVARQVQIGAVLSPGSYLVVPTSTGHHLLQQCRSTAQXXXXXXXXVPPAPLLTQDGKAFSPQLEAALSAVFEDLDADCDGVLSREELAGFLAATEGAALEDGAHAWLLSHFDSRDGGLTRAGLLQAYRFMWQDAGRDARVLTRDLRRFGFDARALSRAAAPRSAAAALVVHASAPFALAPHAAARDAQRLLDAAWRLPMTALGKCEEVVAQEGGRRARVWWLEAQGGRGLSVAVENCXXXXXXXXXXXXALRAVVDCSGSVNVVSSAGAVAAEAVVRPGEMALIHRLVAVDQGGGDVHIEWTHSIQWL
Sbjct: 1 MVDAASAIVSADSQPGVRQLARHLYLYSVRIGSTFNLYVEYCAAAACVVITLDFSRSDNIVIEGADCKETAAHSLQATATAYPFTRTLVARLRVDDRHRPAVLRNECSWELQPLRNSEALTAAAVEREDAAAALLARTTQLLRQHDFSASTSPADALVQACTTHGIHFIDHAFPPTSSSLGSGFDGVPIVWRRASDLVPPGSNNNCSSAHSLPPILPADLRPSDLRAATALENAEPDFACALRALAEKPQLVAALLANQPRGGRRAGVYSVVTYQGGIRRALLLDDFFPCHAGVAGGPCVTRCHGDALWPLLLEKALAKLAGGYTRALSRGYSTSASTQMLHALVDLTGAPYHRIRLDGDAWQPTDVWRSLCDWQSSGWLIVACTHSTSXXXXXXXXXXXXXXSPTVGXSGKRGGESRAGGLLLDYAYTVLGCRDLGGDRVVKLRGPLQLGAWEGITPAESVAGGLDAEQRTAGDEVRQALSLICRDCTDAFYVPLSHLPRHFGTLAVIMARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAPGEANIVPNAAAAQVYISVHQGDARAXXXXXXXXXXXGGYMDMGVTVLRVRPDFALEAVACSGDVVARQVQIGAVLSPGSYLVVPTSTGHHLLQQCRSTAQXXXXXXXXVPPAPLLTQDGKAFSPQLEAALSAVFEDLDADCDGVLSREELAGFLAATEGAALEDGAHAWLLSHFDSRDGGLTRAGLLQAYRFMWQDAGRDARVLTRDLRRFGFDARALSRAAAPRSAAAALVVHASAPFALAPHAAARDAQRLLDAAWRLPMTALGKCEEVVAQEGGRRARVWWLEAQGGRGLSVAVENCXXXXXXXXXXXXALRAVVDCSGSVNVVSSAGAVAAEAVVRPGEMALIHRLVAVDQGGGDVHIEWTHSIQWL 931
BLAST of jgi.p|Trimin1|156751 vs. uniprot
Match: A0A7S3H3T5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3T5_9STRA) HSP 1 Score: 193 bits (490), Expect = 2.200e-47 Identity = 243/932 (26.07%), Postives = 377/932 (40.45%), Query Frame = 1
Query: 55 QLARHLYLYSVRIGS--TFNLYVEYCAAAACVVITLDFSRSDNIVIEGADCKETAAHSLQATATAYPFTRTLVARLRVDDRHRPAVLRNECSWELQPLRNSEALTAAAVEREDAAAALLARTTQL---LRQHDF----SASTSPADALV-QACTTHGIHFIDHAFPPTSSSLGSG--------FDGVPIV------WRRASDLVPPGSNNNCSSAHSLPPILPADLRPSDLRAATALENAEPD--FACALRALAEKPQLVAALLANQPRGGRRAGVYSVVTYQGGIRRALLLDDFFPCHAGVAGGPCVTRCHGDALWPLLLEKALAKLAGGYTRALSRGYSTSASTQMLHALVDLTGAPYHRIRLDGDAWQPT----DVWRSLCDWQSSGWLIVACTHSTSXXXXXXXXXXXXXXSPTVGXSGKRGGESRAGGLLLDYAYTVLGCRDLG-GDRVVKLRGPLQLGAWEGITPAESVAGGLDAEQRTAGDEVRQALSLICRDCTDAFYVPLSHLPRHFGTLAVIMARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAPGEANIVPNAAAAQVYISVHQGDARAXXXXXXXXXXXGGYMDMGVTVLRVRPDFA-LEAVACSGDVVARQVQIGAVLSP-GSYLVVPTSTGHHLLQQCRSTAQXXXXXXXXVPPA--PLLTQDGKA---FSPQLEAALSAVFEDLDADCDGVLSREELAGFLAATEGAALEDGAHAWLLSHFDSRDG-GLTRAGLLQAYRFMWQDAGRDARVLTRDLRRFGFDARALSRAAAPRSAAAALVVHASAPFALAPHAAARDAQRLLDAAWRLPMTALGKCEEVVAQEGGRRARVWWLEAQGGRGLSVAVENCXXXXXXXXXXXXALRAVVDCSGSVNVVSSAGAVAAEAVVRPGEMALIHRLV 2733
+L+ L L++ R TF VE C V ITL+F S+N IEG ++ TA PF+R V ++ + + A L+ C W T E+ AA + A Q+ L++ + T P+D V Q C +G FID FPPT +SL G+ + W+RA+ + G + + + P D+R + A D F CA+ AL E PQLV L + GVY V + G +++ +DDFFPC G GP +R +G+ LW +LLEKA +KL G Y A+ G++ A++D+TGAP IR D P +WR L + +++ A T T +G R G+ G L+ +AYT++ + GDR+VKLR P W G S +E++ + + F++ L ++F ++ V M R ++ + + VHQ D R YMD+GV++L+V + + +G+ V RQ V P G YLVVPT+TG L Q + + A PL+ ++ F+ + A S +F+ +D D DG LS+ EL ++ TEGA ++D A WL F+S++ GL++ G ++A +F++Q G D L + R G++ + AA L +H + + + A + A LP LG+C E G+ + G G+S VEN L +DCS S NVVS ++ + V+ PGE ++H L+
Sbjct: 11 ELSEVLLLFTTREDDPITFAYEVE-CTTFKAVNITLNFEGSENFAIEG-------QKGMKLTALVRPFSRVKVGKIYLVSDDKRASLKMGCEW-----------TMTEPSMEETAAYIQAHVLQMQPILKEAETIPFPPPETDPSDEKVAQICHNYGKKFIDKDFPPTITSLFKADTKLSPGEMSGMSVTKRSAIEWKRAAGFME-GQYD----------VFLGGIEPGDIR-----QGALGDCWFLCAIAALTEFPQLVLDLFETKEHNDH--GVYRVRFCKNGWWQSVRVDDFFPCFPGA--GPIYSRSNGNELWVMLLEKAFSKLCGSY-EAIKSGWA-------YEAMMDMTGAPCKTIRFDDSTITPLIESGQLWRDLMFYDGENYIMSASTPGED----------------TFTETGNRPGKDSTG-LVAGHAYTLVAAKQTSKGDRLVKLRNPWGSMEWTGDWSDNSPLW---------TEEMQAEIERLVESDDGMFWMSFEDLIKNFYSVNVCMVRHKDYHPVPWVEHRSKFHYDYDADELTPETHRVNVPMY---------------VMDMSKKGDFIVEVHQEDMRCHGAPE--------YMDVGVSILKVNETYGTFTLMGGTGNTVERQNGTPLVTLPAGKYLVVPTTTGIKLKQSVAAQKEGELNGAHHAAAAIVPLVRENDAGEMVFTDVVVNAYSELFDRMDYDGDGFLSKSELDQYMMRTEGAPVQDTAFQWLKHKFESKEAPGLSKNGFIRAQQFVFQHTGADEEKLRNEFRILGYNGSMKFES----GRAAVLSIHGTVDYTVKTSVFDPAAY---EEAVELPCKTLGEC---TTFEDGKICL--YRHRSGYCGVSFLVEN---------KHTFPLIFNLDCSKSKNVVSHRPSLKHQMVIPPGEAKIMHHLL 825
BLAST of jgi.p|Trimin1|156751 vs. uniprot
Match: A0A7S2C3E6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3E6_9STRA) HSP 1 Score: 143 bits (361), Expect = 5.130e-33 Identity = 122/371 (32.88%), Postives = 177/371 (47.71%), Query Frame = 1
Query: 1717 QVYISVHQGDARAXXXXXXXXXXXGGYMDMGVTVLRVRPDFALEAVACSGDVVARQVQIGAVLSPGSYLVVPTSTGHHLLQQCRSTAQXXXXXXXXVPPAPLLTQDGKA-------------------------------FSPQLEAALSAVFEDLDADCDGVLSREELAGFLAATEGAALEDGAHAWLLSHFDSRDGGLTRAGLLQAYRFMWQDAGRDARVLTRDLRRFGFDARALSRAAAPRSAAAALVVHA-SAPFALAPHAAARDAQRLLDAAWRLPMTALGKCEEVVAQEGGRRARVWWLEAQGGRGLSVAVENCXXXXXXXXXXXXALRAVVDCSGSVNVVSSAGAVAAEAVVRPGEMALIHRLV 2733
++YISVHQ D R Y+D+GVTVL+++PD++ + VA SG+ RQ Q L G YLVVPT+TG Q + + PP L+ + A FSP++ AAL+ +F LDAD DG+L REEL F+ TE ++ D + WL+ FDS +GGLT+ G Y +M++ +G D + RDL G+D R+L A L H+ + F L P DA + A LP+ LGKC+E+ EGG +++ A G G+S AVENC + +DCS S NV+S G + A ++ P + ++H L+
Sbjct: 75 EMYISVHQEDERCEGAKP--------YLDIGVTVLQIQPDYSYKLVASSGNSAERQNQTQVTLKSGQYLVVPTTTGCKFAQGLQYSGG---------PPVALVQEREDANPPSASTAGSLSAGXXXXXXXXXXXXXVVREFSPEVTAALNEIFRRLDADLDGLLLREELNTFMQMTEACSMSDEVYDWLIQKFDSFNGGLTQDGFRAVYMYMFESSGADVETIWRDLIYMGYD-RSLDLLYARTCM---LAFHSMNHEFELHPQPFDSDAY---EEAMELPIKELGKCKEL---EGGL-VKLYTRRA-GYSGVSFAVENCSSQY---------IEFTLDCSESRNVMSHRGQLRASQLIPPSQTKVLHHLM 407
BLAST of jgi.p|Trimin1|156751 vs. uniprot
Match: A0A6U0U9X1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0U9X1_9STRA) HSP 1 Score: 138 bits (348), Expect = 2.730e-32 Identity = 118/321 (36.76%), Postives = 161/321 (50.16%), Query Frame = 1
Query: 1795 YMDMGVTVLRVRPDFALEAVACSGDVVARQVQIGAV-LSPGSYLVVPTSTGHHLLQQC--RSTAQXXXXXXXXVPPAPLLTQDGKAFSPQLEAALSAVFEDLDADCDGVLSREELAGFLAATEGAALEDGAHAWLLSHFDSRDG-GLTRAGLLQAYRFMWQDAGRDARVLTRDLRRFGFDARALSRAAAPRSAAAALVVHASAPFALAPHAAARDAQRLLDAAWRLPMTALGKCEEVVAQEGGRRARVWWLEAQGG-RGLSVAVENCXXXXXXXXXXXXALRAVVDCSGSVNVVSSAGAVAAEAVVRPGEMALIHRLVAVD 2742
Y+D+GVTVLR+ PD+ E V+ SG+ RQ Q + LSPG YLVVPT+TG Q A+ P A +G+ ++ + E AL++VF LD D DGVL+R+ELA F+ EG + WLL+ FDS DG GLT G Q Y +MW GR+ V+ RDL G++ R L S LVVHA A F + HA + D + + A LP+ A G C A V +GG G+S+AVEN +R +D SGS NV + + VV GEM ++H ++ +
Sbjct: 8 YLDIGVTVLRILPDYTYELVSSSGNTAERQNQTDEIMLSPGEYLVVPTTTGCKFRQGVIEAKRAEEPNFRSLWRPGA-----EGRRYAAEAEHALNSVFRALDVDLDGVLNRDELASFVRLAEGCDAKPEVLDWLLTTFDSVDGEGLTPDGFRQCYTYMWDAGGRNDEVIWRDLLFHGYN-RQLQLL---YSRTIMLVVHADAAFEM--HAQSFDPEAF-EEAMELPIKAFGDCTHY------EEAHVKLYVRRGGYNGVSIAVENVSDAR---------IRFSLDMSGSENVTTHRQDLDYSEVVPAGEMKVMHHVMPTE 301
BLAST of jgi.p|Trimin1|156751 vs. uniprot
Match: A0A7S2RYQ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYQ7_9STRA) HSP 1 Score: 120 bits (302), Expect = 2.690e-27 Identity = 77/196 (39.29%), Postives = 100/196 (51.02%), Query Frame = 1
Query: 1723 YISVHQGDARAXXXXXXXXXXXGGYMDMGVTVLRVRPDFALEAVACSGDVVARQVQIGAVLSPGSYLVVPTSTGHHLLQQCRSTAQXXXXXXXXVPPAPLLTQDGKA------FSPQLEAALSAVFEDLDADCDGVLSREELAGFLAATEGAALEDGAHAWLLSHFDSRDGGLTRAGLLQAYRFMWQDAGRDARVL 2292
+ISVHQ D R Y+D+GVTVL + PD VA SG+ RQ Q L G YLVVPT+TG Q + + PP L + A FS ++ AAL+ +F LD+D D VLSR EL F+ TEG A+ D H WL+S FDS GGLT+ G AY +M++ +G D +
Sbjct: 36 FISVHQEDERCEGSKP--------YLDIGVTVLEILPDHTYRLVASSGNSAERQNQTEVNLKKGQYLVVPTTTGCKFAQGIQHSGG---------PPVSLFKESADAVDGRREFSDEVTAALNEMFRRLDSDLDNVLSRNELNTFMQMTEGCAMSDEVHKWLISQFDSYQGGLTQDGFRAAYMYMFESSGGDPETI 214
BLAST of jgi.p|Trimin1|156751 vs. uniprot
Match: A0A7S2C3D6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3D6_9STRA) HSP 1 Score: 122 bits (305), Expect = 8.790e-27 Identity = 80/233 (34.33%), Postives = 114/233 (48.93%), Query Frame = 1
Query: 1717 QVYISVHQGDARAXXXXXXXXXXXGGYMDMGVTVLRVRPDFALEAVACSGDVVARQVQIGAVLSPGSYLVVPTSTGHHLLQQCRSTAQXXXXXXXXVPPAPLLTQDGKA-------------------------------FSPQLEAALSAVFEDLDADCDGVLSREELAGFLAATEGAALEDGAHAWLLSHFDSRDGGLTRAGLLQAYRFMWQDAGRDARVLTRDLRRFGFD 2322
++YISVHQ D R Y+D+GVTVL+++PD++ + VA SG+ RQ Q L G YLVVPT+TG Q + + PP L+ + A FSP++ AAL+ +F LDAD DG+L REEL F+ TE ++ D + WL+ FDS +GGLT+ G Y +M++ +G D + RDL G+D
Sbjct: 75 EMYISVHQEDERCEGAKP--------YLDIGVTVLQIQPDYSYKLVASSGNSAERQNQTQVTLKSGQYLVVPTTTGCKFAQGLQYSGG---------PPVALVQEREDANPPSASTAGSLSAGXXXXXXXXXXXXXVVREFSPEVTAALNEIFRRLDADLDGLLLREELNTFMQMTEACSMSDEVYDWLIQKFDSFNGGLTQDGFRAVYMYMFESSGADVETIWRDLIYMGYD 290
BLAST of jgi.p|Trimin1|156751 vs. uniprot
Match: A0A078AZ10_STYLE (Calpain family cysteine protease containing protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078AZ10_STYLE) HSP 1 Score: 103 bits (258), Expect = 5.520e-19 Identity = 113/454 (24.89%), Postives = 199/454 (43.83%), Query Frame = 1
Query: 61 ARHLYLYSVR--IGSTFNLYVEYCAAAACVVITLDFSRSDNIVIEGADCKETAAHSLQATATAYPFTRTLVARLRVDDRH--RPAVLRNECSWELQPLRNSEALTAAAVEREDAAAALLARTTQLLRQH----DFSASTSPADALVQACTTHGIH--FIDHAFPPTSSSL-----GSGFDGVPIVWRRASDLVPPGSNNNCSSAHSLPPILPADLRPSDLRAATALENAEPDFACALRALAEKPQLVAALLANQPRGGRRAGVYSVVTYQGGIRRALLLDDFFPCHAGVAGGPCVTRCHGDALWPLLLEKALAKLAGGYTRALSRGYSTSASTQMLHALVDLTGAPYHRIRLDG----DAWQPTDVWRSLCDWQSSGWLIVACTHSTSXXXXXXXXXXXXXXSPTVGXSGKRGGESRAGGLLLDYAYTVLGCRDLGGDRVVKLRGPLQLGAWEG 1365
A +Y+YSV+ + S F + V+ + V I+LDFS NI +E ++ +AT P T VA ++ D P ++ +++ + + ++R L+ ++ + DF S + + + T G++ FID FPP S+ G FD + I WRR D + + L P + A + P+D+ A+ F CA+ +LAE+P LV + + + G+Y + + G + +++DD+FPC+ GGP +R +G+ LW LLLEKA AK+ GGY + L+ G + AL+DLTG P + D + +WR + + G+L+ T K+ E + L+ +AY+++ ++ G++++ +R P W+G
Sbjct: 9 AHTIYVYSVKQKLLSYFQIDVKEISI---VDISLDFSEGFNIQVEN-------TQDMKVSATINPMTSDTVAVVKAYDETWANPCKVKQFFKFQILFISVVKRSPPLEIQRSYIKNQLINLEREVQKSELFWKDFPLKVSSVEQIKEKLITQGLNANFIDIDFPPLDKSIQDLSKGQAFDRL-IHWRRPKDFMLIDGKDG-----QLDPQVFAKIEPNDIYQG---HLADCWFLCAVSSLAERPALVERIFVTKQYNDQ--GIYQLRICKNGEWQNVIVDDYFPCYPN--GGPMFSRNNGNELWVLLLEKAYAKVHGGY-KNLTGG-------KPYQALMDLTGCPTMSLNFQEQKVKDLIKQGKLWRLIKHFDEEGYLMTGGTPGEDMWSDNKQLDEQ-----------KQKLEEQKRSLVPGHAYSIISAIEVKGNKLLNIRNPWGNFEWDG 420
BLAST of jgi.p|Trimin1|156751 vs. uniprot
Match: A0A7S3S2L2_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3S2L2_9SPIT) HSP 1 Score: 98.6 bits (244), Expect = 7.770e-18 Identity = 135/508 (26.57%), Postives = 194/508 (38.19%), Query Frame = 1
Query: 712 FACALRALAEKPQLVAAL-LANQPRGGRRA----------GVYSVVTYQGGIRRALLLDDFFPCHAGVAGGPCVTRCHGDALWPLLLEKALAKLAGGYTRALSRGYSTSASTQMLHALVDLTGAPYHRIRLDGDAWQPTDV------WRSLCDWQSSGWLIVACTHSTSXXXXXXXXXXXXXXSPTVGXSGKRGGESRAGGLLLDYAYTVLGCRDL-GGDRVVKLRGPLQL----GAWEGITP--AESVAGGLDAEQRTAGDEVRQALSLICRDCTDAFYVPLSHLPRHFGTLAVIMARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAPGEANIVPN-----------AAAAQVYISVHQGDARAXXXXXXXXXXXGGYMDMGVTVLRVRPDFALEAVACSGDVVARQVQIGAVLSPGSYLVVPTSTGHHLLQQCRSTAQXXXXXXXXVPPAPLLTQDGKAFSPQLEAALSAVFEDLDADCDGVLSREEL 2130
F C+L A+AE P L+ L L + P G A G+Y + + G R L++DDFFPC G GP ++ HG LW LLLEKA AKL G Y AL G L DLTGAP RLD + T+V + L + + +++ T G R G+ GGL+ +AY+++ R L G ++KLR P GAW +P ++V LDAE+ E AF++ +HF +++V MA A++ A++ P V + +HQ D R+ +D+GV VLR D +L V G V+R + L PGSYL+VPT++G + +AQ P LL G + + A + DAD DG+L +L
Sbjct: 5 FMCSLAAVAEFPHLIHNLFLDDWPTGAPTAADARPAADASGLYRLRLNKHGQWRELVVDDFFPCRPG--SGPVFSQAHGPELWVLLLEKAYAKLHGSYL-ALRSG-------MCYEGLADLTGAPCLYRRLDEEDDPDTEVEEKPVTFADLQRYDRNNFVVCCSTPGQDQMT-----------------EGGRPGDQE-GGLVPGHAYSLISARKLHSGAEILKLRNPWGTFEWQGAWSDNSPEMTDAVRAELDAEEDDGEAEASAN--------DGAFWMSFEDFCKHFVSISVAMAHVPQPPSACNANGVPRCKAPTVREWAPELVKRSKTILAPEVR---ASSKMPASLRPTHVFDLEVKPTRETKVAVIVGLHQVDERSTPKLPN--------VDVGVAVLRKAGDGSLALVGSVGTSVSRDRNLELELVPGSYLIVPTTSGA-VPPTNAGSAQPSEA------PGRLLLDSGD-LTAKARQAFDLIAFTFDADMDGLLGEADL 457
BLAST of jgi.p|Trimin1|156751 vs. uniprot
Match: J9J954_9SPIT (Dek1-calpain-like protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9J954_9SPIT) HSP 1 Score: 99.8 bits (247), Expect = 1.190e-17 Identity = 164/753 (21.78%), Postives = 283/753 (37.58%), Query Frame = 1
Query: 61 ARHLYLYSVRIGSTFNLYVEYCAAAACVVITLDFSRSDNIVIEGADCKETAAHSLQATATAYPFTRTLVARLRVDDRHRPAVLRNECSWELQPLRNSEALTAAAVEREDAAAALLARTTQLLRQ--------HDFSASTSPADALVQACTTHGIH--FIDHAFPPTSSSL-----GSGFDGVPIVWRRASDLVPPGSNNNCSSAHSLPPILPADLRPSDLRAATALENAEPDFACALRALAEKPQLVAALLANQPRGGRRAGVYSVVTYQGGIRRALLLDDFFPCHAGVAGGPCVTRCHGDALWPLLLEKALAKLAGGYTRALSRGYSTSASTQMLHALVDLTGAPYHRIRLDGDAWQPT----DVWRSLCDWQSSGWLIVACTHSTSXXXXXXXXXXXXXXSPTVGXSGKRGGESRAGGLLLDYAYTVLGCRDLGGDRVVKLRGPLQLGAWEGITPAESVAGGLDAEQRTAGDEVRQALSLICRDCTDA-FYVPLSHLPRHFGTLAVIMARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAPGEANIVPNAAAAQVYISVHQGDARAXXXXXXXXXXXGGYMDMGVTVLRVRPDFALEAVACSGDVVARQVQIGAVLSPGSYLVVPTSTGHHLLQQCRSTAQXXXXXXXXVPPAPLLTQDGKAFSPQLEAALSAVFEDLDADCDGVLSREELAGFLAATEGAAL-----EDGAHAWLLSHFDSRDGGLTRAGLLQ 2244
A +Y+YS+ + + + +TLDFS NI +E A ++ AT P VA +R D +W P R + +T + E+ + + QL R DF ++ D + + T G++ FID FPP S+ G FD + I WRR D + + N I P D++ L A+ F CAL LAE+P L+ L + G+Y + + G + +++DD+ PC+ GGP +R +G LW +LLEKA AKL GGY + L+ G + HAL+DL+G P + + + +W+ L + ++I A T S GL+ +AY+++ ++ +++++R P W G S D + D ++ L D +D F++ + ++F +L V R P +++++ ++++Q D R Y+D+G+ +L++ + V R ++I VL PG Y++VP +TG L + T + L Q G P L + +S +F+ D + ++ +E F G L E+ +L+ F+S + G+T G +
Sbjct: 46 AHTIYVYSIDVKEI-----------SIIDVTLDFSEGFNIQVEN-------AQDMKIQATVQPMQSDTVAVVRGYDE----------TW-ANPCRVT--ITKRSPPIEEQRTYIKNQLIQLERDVQKNELFWKDFPLKSATIDQIKEKLITQGLNANFIDIDFPPLDKSIQDPSKGLAFDRL-IHWRRPKDFMEVDTTNGQLDPQVFSRIDPNDIQQGQL--------ADSWFLCALSNLAERPALIERLFITKQYNDY--GLYHLRICKNGEWQDVIIDDYIPCYPN--GGPIFSRNNGSDLWVMLLEKAYAKLHGGY-KNLTGG-------KPFHALMDLSGCPTMSLNFNDAKVKEMIGSGKLWKLLKHFSEESYIIAAGTPVEEMWFDNIRDQDENRQSNN--------------GLVPGFAYSIIQAKEYKSHKLIQIRNPWGNFEWNGDWSNTS-----DLWTQEMVDVMKPTL-----DSSDGTFWMNFNDYAQNFSSLDVCRVR------------NWEECRMRGRFVRFQDAENATFDYVQSIWIYALDVPRKSHVI---------LTLNQEDERIEGVLPRR-----SYIDIGLAILKMDKEQGSSLHMHKDYQVDRSIEIEMVLEPGQYMIVPRTTGVGLKKP--DTTKDLDLIR-------FLDQQGN-LHPLLASTISDIFQKFDVSANQLIELKEFKAFYEII-GKPLNAVKDENTFKEAILNKFNSTEQGITLRGFYE 685
BLAST of jgi.p|Trimin1|156751 vs. uniprot
Match: A0A0M0JIJ7_9EUKA (Calpain family cysteine protease containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JIJ7_9EUKA) HSP 1 Score: 95.1 bits (235), Expect = 4.170e-16 Identity = 141/497 (28.37%), Postives = 202/497 (40.64%), Query Frame = 1
Query: 142 VVITLDFSRSDNIVIEG-ADCKETAAHSLQATATAYPFTRTLVARLRVDDRHRPAVLRNECSWELQPLRNSEALTAAAVEREDAAAALLA-----RTTQLLRQHDFSASTSPADALVQACTTHGIHFIDHAFPPTSSSLGSGFDGVPIV-----WRRASDLVPPGSNNNCSSAHSLPPILPAD-LRPSDLRAATALENAEPDFACALRALAEKPQLVAALL----ANQPRGGRRA---GVYSVVTYQGGIRRALLLDDFFPCHAGVAGGPCVTRCHGDALWPLLLEKALAKLAGGYTRALSRGYSTSASTQMLHALVDLTGAPYHRIRLDGDAWQPTDVWRSLCDWQSSGWLIVACTHSTSXXXXXXXXXXXXXXSPTVGXSGKRGGESRAGGLLLDYAYTVLGCRDL------GGDRVVKLRGPLQLGAWEGITPAESVAGGLDAEQRTAGDEVRQAL------SLICRDCTD--AFYVPLSHLPRHFGTLAVIMA 1533
V + +DF+ S N+ +E A + + L A PF R +ARL + + + SW ++ A +RE AL A T ++ + + SA S +H F+D FPP S+ +P WRR +D + A PP + D L PSD++ AL N F C++ A+AE P LV +L A GG GVY ++ + G + +DD+FPC +GGP ++ +G LW LLLEKA AKL G Y +L G+ AL+DLTGAP R D D DV S D Q L T ST T+ G + GL+ +AYT++G L G R++KLR P W G SV + +VR+AL I D F++ +HF ++AV +A
Sbjct: 354 VELDIDFNGSTNLRLERVAGSDDGSFGPLTARVKVPPFERKPLARLVFNGGGDDVSMTYDLSWRIKEPDPKAVAERARDDREAIETALDAVKREWMTIKINSRRERSALPSVDTMRRLIAQSHNGSFLDVEFPPLVESIDGVASPLPSTALMYSWRRPTDFL----------AIEQPPRVFVDGLLPSDVQQG-ALGNCW--FMCSVAAVAEFPALVRSLFLEAWAEGAPGGPSHDADGVYDLMFNKHGQWVHVRVDDYFPCRP--SGGPAFSQANGPELWVLLLEKAYAKLHGSYF-SLRSGFG-------YEALMDLTGAPTIYRRFDED-----DV--SFADIQRYDRLQCLITCSTPG-------------QDTISEGGDGRLAAAGSGLVPGHAYTLIGTAVLPEGTRYAGARLLKLRNPWGSFEWGGRFSDNSV--------EMSDPDVRRALYDDASTDEIEEPAADDGTFFMMFDDFKQHFTSIAVCIA 799 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156751 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1000 ID=mRNA_1000|Name=jgi.p|Trimin1|156751|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2796bp|location=Sequence derived from alignment at Contig_1:510381..514908+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGTGGATGCAGCAAGTGCAATAGTGAGTGCTGACAGCCAGCCTGGCGTback to top protein sequence of jgi.p|Trimin1|156751 >Trimin1|156751|e_gw1.1.78.1 ID=Trimin1|156751|e_gw1.1.78.1|Name=jgi.p|Trimin1|156751|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=932bp MVDAASAIVSADSQPGVRQLARHLYLYSVRIGSTFNLYVEYCAAAACVVIback to top mRNA from alignment at Contig_1:510381..514908+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1000 ID=mRNA_1000|Name=jgi.p|Trimin1|156751|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4528bp|location=Sequence derived from alignment at Contig_1:510381..514908+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_1:510381..514908+ >mRNA_1000 ID=mRNA_1000|Name=jgi.p|Trimin1|156751|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2796bp|location=Sequence derived from alignment at Contig_1:510381..514908+ (Tribonema minus UTEX_B_3156 )back to top |