prot_S-firma_F_contig1035.498.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1035.498.1
Unique Nameprot_S-firma_F_contig1035.498.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length211
Homology
BLAST of mRNA_S-firma_F_contig1035.498.1 vs. uniprot
Match: D8LBP7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBP7_ECTSI)

HSP 1 Score: 376 bits (966), Expect = 1.150e-123
Identity = 185/211 (87.68%), Postives = 193/211 (91.47%), Query Frame = 0
Query:    1 MSVDPDKLYIVHSKPKHDSHSDAIRQFEGDFECLSNTYKCPVSLRGDPEPYPSVEHALQASKTDDVELKGTIRQAKNAIEAKKLARVVKPTPAWRAGSEKIVEALVRDKFRRNAKAREVLVETGRVKLVYTNTHDDRVWGVCGGKGDNKLGKLLERVRADALAGKDTEVWCAMRFELALPLDVEVALAVSKAGQIVAEPSFEGKPIIRMGK 211
            MSVDPD +YIVHSKPKHDSH+DAIRQFEGDFECLSNTYKCPVSLRGDPEPYPSVEHALQASKTDD ELK  IRQAKNAIEAKK+ARV KP P WR  SEKI EALVRDKFRRNAKAREVLV TGRVKLVYTNTHDDR WGVC GKG+NKLGKLLERVRADALAGKDTE WCA RF+LALPLDV V  AVSKAG+IVA+PSFEGKP+IRMGK
Sbjct:    1 MSVDPDTVYIVHSKPKHDSHADAIRQFEGDFECLSNTYKCPVSLRGDPEPYPSVEHALQASKTDDFELKAAIRQAKNAIEAKKIARVAKPKPDWRGSSEKIAEALVRDKFRRNAKAREVLVGTGRVKLVYTNTHDDRFWGVCTGKGENKLGKLLERVRADALAGKDTEAWCATRFQLALPLDVMVGFAVSKAGKIVADPSFEGKPVIRMGK 211          
BLAST of mRNA_S-firma_F_contig1035.498.1 vs. uniprot
Match: A0A835YNI4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNI4_9STRA)

HSP 1 Score: 159 bits (401), Expect = 4.660e-42
Identity = 90/209 (43.06%), Postives = 123/209 (58.85%), Query Frame = 0
Query:    4 DPDKLYIVHSKPKH-DSHSDAIRQFEGDFECLSNTYKCPVSLRGDPEPYPSVEHALQASKTDDVELKGTIRQAKNAIEAKKLARVVKPTPAWRAGSEKIVEALVRDKFRRNAKAREVLVETGRVKLVYTNTHDDRVWGVCGGKGDNKLGKLLERVRADALAGKDTEVWCAMRFELALPLDVEVALAVSKAGQIVAEPSFEGKPIIRMGK 211
            +P + Y + SKPK  D    AI   + ++E LSN ++  V L GD EPYP+VEHA QASKT+D++L+  IR A  AIEAKK AR +  + AWR+ SE I+EALVRDKFRR+ K RE L+ TG   L Y N H+D++WGVC GKG+NKLG+                          +P      + +SK G ++  P  EG  ++++GK
Sbjct:    3 EPGRYYYMPSKPKAVDPLKTAIHIGKEEYEYLSNLHRAKVYLPGDEEPYPTVEHAFQASKTEDMQLRAEIRAAPTAIEAKKAARKIAVSDAWRSRSEAIMEALVRDKFRRHDKYREQLLGTGAQLLAYVNEHNDKLWGVCDGKGENKLGEFA-----------------------LVPQCSAAPMNISKGGAVLDTPVIEGTALVQLGK 188          
BLAST of mRNA_S-firma_F_contig1035.498.1 vs. uniprot
Match: A0A7S2SUX0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUX0_9STRA)

HSP 1 Score: 131 bits (330), Expect = 2.300e-34
Identity = 76/177 (42.94%), Postives = 102/177 (57.63%), Query Frame = 0
Query:    2 SVDPDKLYIVHSKPKHDSHSDA-IRQFEGDFECLSNTYKCPVSLRGDPE-PYPSVEHALQASKTDDVELKGTIRQAKNAIEAKKLARVV------KPTPAWRAGSEKIVEALVRDKFRRNAKAREVLVETGRVKLVYTNTHDDRVWGVCGGKGDNKLGKLLERVRADALAGKDTEVW 170
            ++DPDK+     KPK      A    F G+ + LS  +KC V L  DP+  YP+VEHAL ASKT D+E++  I   ++ + AK+L              AWRA S  I+ AL RDKFRR  + RE L+ TG  KLV++NT++D  WGVC GKG N LG  L+++R +   GKD   W
Sbjct:   70 TLDPDKVRYAKPKPKIQEEEPAGSGTFSGELKFLSPMHKCQVQLPSDPQRTYPTVEHALAASKTSDMEIRDKILAEEDPVAAKRLGTKCLGKSDSDAAKAWRARSPGIMAALFRDKFRRTPRYRERLLGTGHQKLVHSNTYNDTYWGVCKGKGQNVLGDTLQQLREEIRNGKDLNAW 246          
BLAST of mRNA_S-firma_F_contig1035.498.1 vs. uniprot
Match: K8YN62_NANGC (Rna recognition motif-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YN62_NANGC)

HSP 1 Score: 117 bits (293), Expect = 6.190e-29
Identity = 75/182 (41.21%), Postives = 104/182 (57.14%), Query Frame = 0
Query:   24 IRQFEGDFECLSNTYKCPVSLRGDP-------EPYPSVEHALQASKTDDVELKGTIRQAKNAIEAK----KLARVVKPTPAWRAGSEKIVEALVRDKFRRNAKAREVLVETGRVKLVYTNTHDDRVWGVCGGKGDNKLGKLLERVRADALAGK-DTEVWCAMRFELALPLDVEVALAVSKAG 193
            I  F G+++ LS   K  V L G+        + YP+VEHALQASK+ D   + +I  +K+A+EAK    K   V K   AW+  S  ++EAL+RDKFRR+   R+ L+ TG  +LVY N H+D+ WG C GKG N LG+LLERVRAD   G     +W    F       V + ++V++ G
Sbjct:   56 ITAFTGEYDFLSTLSKSRVVLPGEGVMEGEGFQAYPTVEHALQASKSSDPTYRQSILSSKDALEAKRRGAKAPNVDKQ--AWKLKSLVVMEALLRDKFRRHKGLRQQLMNTGTKQLVYENEHNDQFWGTCKGKGHNHLGQLLERVRADEKEGLLGILLWAKQVFNATSDSKVRLDVSVTREG 235          
BLAST of mRNA_S-firma_F_contig1035.498.1 vs. uniprot
Match: W7TWY4_9STRA (Rna recognition motif-containing protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWY4_9STRA)

HSP 1 Score: 122 bits (307), Expect = 8.700e-29
Identity = 81/202 (40.10%), Postives = 113/202 (55.94%), Query Frame = 0
Query:   24 IRQFEGDFECLSNTYKCPVSLRGDP-------EPYPSVEHALQASKTDDVELKGTIRQAKNAIEAK----KLARVVKPTPAWRAGSEKIVEALVRDKFRRNAKAREVLVETGRVKLVYTNTHDDRVWGVCGGKGDNKLGKLLERVRADALAGK-DTEVWCAMRFELALPLDVEVALAVSKAGQIVAEP--SFEGKPIIRMGK 211
            I  F G+++ LS   K  V L G+        + YP+VEHALQASK+ D   + +I  +K+A+EAK    K   V K   AW+  S  ++EAL+RDKFRR+   R+ L+ TG  +LVY N H+D+ WG C GKG N LG+LLERVRAD   G     +W    F       V + ++V++ G  + E   + E K I+  GK
Sbjct:   36 ITAFTGEYDFLSTLSKSRVVLPGEGVMEGEGFQAYPTVEHALQASKSSDPTYRQSILSSKDALEAKRRGAKAPNVDKQ--AWKLKSLVVMEALLRDKFRRHKGLRQQLMNTGTKQLVYENEHNDQFWGTCKGKGHNHLGQLLERVRADEKEGLLGILLWAKQVFNATSDSKVRLDVSVTREGHPLPEADLTLERKAIVTFGK 235          
BLAST of mRNA_S-firma_F_contig1035.498.1 vs. uniprot
Match: A0A4D9DEI1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEI1_9STRA)

HSP 1 Score: 120 bits (300), Expect = 7.610e-28
Identity = 79/202 (39.11%), Postives = 112/202 (55.45%), Query Frame = 0
Query:   24 IRQFEGDFECLSNTYKCPVSLRGDP-------EPYPSVEHALQASKTDDVELKGTIRQAKNAIEAK----KLARVVKPTPAWRAGSEKIVEALVRDKFRRNAKAREVLVETGRVKLVYTNTHDDRVWGVCGGKGDNKLGKLLERVRADALAGK-DTEVWCAMRFELALPLDVEVALAVSKAGQIVAEP--SFEGKPIIRMGK 211
            I  F G+++ L    K  V + G+        + YP+VEHALQASK+ D   + +I  +K+A+EAK    K   V K   AW+  S  ++EAL+RDKFRR+   R+ L+ TG  +LVY N H+D+ WG C GKG N LG+LLERVRAD   G     +W    F       V + ++V++ G  + E   + E K I+  GK
Sbjct:   36 ITAFTGEYDFLCTLSKSRVVIPGEGVMEGEGFQAYPTVEHALQASKSSDPTYRQSILSSKDALEAKRRGAKAPNVDKQ--AWKLKSLVVMEALLRDKFRRHKGLRQQLMNTGTKQLVYENEHNDQFWGTCKGKGHNHLGQLLERVRADEKEGLLGILLWAKQVFNATSDSKVRLDVSVTREGHPMPEADLTLERKAIVTFGK 235          
BLAST of mRNA_S-firma_F_contig1035.498.1 vs. uniprot
Match: A0A7S0JJA0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JJA0_9EUKA)

HSP 1 Score: 118 bits (295), Expect = 3.020e-27
Identity = 74/197 (37.56%), Postives = 106/197 (53.81%), Query Frame = 0
Query:   18 DSHSDAIRQFEGDFECLSNTYKCPVSLRGDPEPYPSVEHALQASKTD-DVELKGTIRQAKNAIEAKKLARVVKPTPAWRAGSEKIVEALVRDKFRRNAKAREVLVETGRVKLVYTNTHDDRVWGVCGGKGDNKLGKLLERVRADALAGKDTEVWCAMRFELALPLDVE--VALAVSKAGQIVAEPSFEGKPIIRMGK 211
            D   ++I  F G +E + N ++C V   G    Y SVEHA QA K   DVE    IR+A +  EA  L + V   P+W      +++AL+RDKFRR+A  RE L+ +    L+ TNT  +  WGVC G+G N LGKLL  +R +  AG DT+ W    F +A P      ++L V+K G ++       + +I +GK
Sbjct:   52 DECCESITSFTGRWEAMGNWFQCAVIHEG--VTYRSVEHAFQAVKAAADVEAVKAIRRASSPKEAHALGQKVPLPPSWERRKLGVMQALLRDKFRRDASLRERLLRSAPKNLIATNTWGEVYWGVCTGRGGNHLGKLLMGLRQEVQAGTDTDAWLLGSFNIAKPSAEHEPLSLEVTKGGAVIDTCKLGTEALIMIGK 246          
BLAST of mRNA_S-firma_F_contig1035.498.1 vs. uniprot
Match: R1ET62_EMIHU (RRM domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ET62_EMIHU)

HSP 1 Score: 107 bits (266), Expect = 2.710e-23
Identity = 71/194 (36.60%), Postives = 102/194 (52.58%), Query Frame = 0
Query:   22 DAIRQFEGDFECLSNTYKCPVSLRGDPEPYPSVEHALQASKTD-DVELKGTIRQAKNAIEAKKLARVVKPTPAWRAGSEKIVEALVRDKFRRNAKAREVLVETGRVKLVYTNTHDDRVWGVCGGKGDNKLGKLLERVRADALAGKDTEVWCAMRFELALPLDVE--VALAVSKAGQIVAEPSFE-GKPIIRMGK 211
            ++I  F G +E L+N +   V  RG    Y SVEHA QA+K   D +    IR+AK    A  L + V     W      ++EAL+RDKF R+A  RE L+ T +  L+ TN+  +  WGV GG+G N LGK L ++R +A  G D   W +  F+LA   D    ++L V K G +V   +   G+  + +GK
Sbjct:   44 ESITDFTGRWEALANWFPAAVVHRG--VRYASVEHAFQAAKAGADADAARAIREAKTPQAAHALGQKVPLPQDWERRKLGLMEALLRDKFVRDAALRERLLRTDQQNLIATNSWGETFWGVSGGRGSNALGKALMKLRGEAREGSDVTAWLSSSFDLARADDPHDGLSLEVHKGGTVVETVALPAGRAALLLGK 235          
BLAST of mRNA_S-firma_F_contig1035.498.1 vs. uniprot
Match: R1DBP7_EMIHU (NADAR domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DBP7_EMIHU)

HSP 1 Score: 102 bits (253), Expect = 3.770e-23
Identity = 62/158 (39.24%), Postives = 87/158 (55.06%), Query Frame = 0
Query:   22 DAIRQFEGDFECLSNTYKCPVSLRGDPEPYPSVEHALQASKTD-DVELKGTIRQAKNAIEAKKLARVVKPTPAWRAGSEKIVEALVRDKFRRNAKAREVLVETGRVKLVYTNTHDDRVWGVCGGKGDNKLGKLLERVRADALAGKDTEVWCAMRFELA 178
            ++I  F G +E L+N +   V  RG    Y SVEHA QA+K   D +    IR+AK    A  L + V     W      ++EAL+RDKF R+A  RE L+ T +  L+ TN+  +  WGV GG+G N LGK L ++R++A  G D   W +  F+LA
Sbjct:   44 ESITDFTGRWEALANWFPAAVVHRG--VRYASVEHAFQAAKAGADADAARAIREAKTPQAAHALGQKVPLPQDWERRKLGLMEALLRDKFVRDAALRERLLRTDQQNLIATNSWGETFWGVSGGRGSNALGKALMKLRSEAREGADVTAWLSSSFDLA 199          
BLAST of mRNA_S-firma_F_contig1035.498.1 vs. uniprot
Match: A0A7L9C501_9BACT (NADAR family protein n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A7L9C501_9BACT)

HSP 1 Score: 100 bits (248), Expect = 5.350e-23
Identity = 59/143 (41.26%), Postives = 80/143 (55.94%), Query Frame = 0
Query:   23 AIRQFEGDFECLSNTYKCPVSLRGDPEPYPSVEHALQASKTDDVELKGTIRQAKNAIEAKKLARVVKPTPAWRAGSEKIVEALVRDKFRRNAKAREVLVETGRVKLVYTNTHDDRVWGVCGGKGDNKLGKLLERVRADALAGK 165
            AI  F G++  LSN +   V+  G  + YPSVEHA QA+KT DV  +  I     A EAK+  R ++    W      ++E  VRDKF  +A     L+ TG  +LV  N   DR WGVC G+G+N LGK+L +VR++   GK
Sbjct:   27 AIDSFSGEYRYLSNFWLAAVTYEG--KRYPSVEHAYQAAKTLDVGERARIAGLATASEAKRAGRGLRVRVDWEQVKLGVMEQCVRDKFLNHADLGAKLLATGEAELVEGNDWGDRFWGVCEGRGENHLGKILMKVRSELRRGK 167          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1035.498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBP7_ECTSI1.150e-12387.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YNI4_9STRA4.660e-4243.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SUX0_9STRA2.300e-3442.94Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
K8YN62_NANGC6.190e-2941.21Rna recognition motif-containing protein (Fragment... [more]
W7TWY4_9STRA8.700e-2940.10Rna recognition motif-containing protein n=2 Tax=N... [more]
A0A4D9DEI1_9STRA7.610e-2839.11Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S0JJA0_9EUKA3.020e-2737.56Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
R1ET62_EMIHU2.710e-2336.60RRM domain-containing protein n=2 Tax=Emiliania hu... [more]
R1DBP7_EMIHU3.770e-2339.24NADAR domain-containing protein n=2 Tax=Emiliania ... [more]
A0A7L9C501_9BACT5.350e-2341.26NADAR family protein n=2 Tax=Planctomycetes TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037238YbiA-like superfamilyGENE3D1.10.357.40coord: 11..168
e-value: 1.0E-32
score: 114.9
IPR037238YbiA-like superfamilySUPERFAMILY143990YbiA-likecoord: 25..159
IPR012816NADARPFAMPF08719DUF1768coord: 30..159
e-value: 3.8E-22
score: 79.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1035contigS-firma_F_contig1035:23456..26099 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1035.498.1mRNA_S-firma_F_contig1035.498.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1035 23456..26099 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1035.498.1 ID=prot_S-firma_F_contig1035.498.1|Name=mRNA_S-firma_F_contig1035.498.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=211bp
MSVDPDKLYIVHSKPKHDSHSDAIRQFEGDFECLSNTYKCPVSLRGDPEP
YPSVEHALQASKTDDVELKGTIRQAKNAIEAKKLARVVKPTPAWRAGSEK
IVEALVRDKFRRNAKAREVLVETGRVKLVYTNTHDDRVWGVCGGKGDNKL
GKLLERVRADALAGKDTEVWCAMRFELALPLDVEVALAVSKAGQIVAEPS
FEGKPIIRMGK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012816NADAR
IPR037238YbiA-like_sf