prot_S-firma_F_contig10345.493.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10345.493.1
Unique Nameprot_S-firma_F_contig10345.493.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length257
Homology
BLAST of mRNA_S-firma_F_contig10345.493.1 vs. uniprot
Match: D7G0A8_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A8_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 2.100e-64
Identity = 145/257 (56.42%), Postives = 167/257 (64.98%), Query Frame = 0
Query:    1 FSEITKVPFPPVYEKFLGIIGIFSFDLGWLISAACLTAGIDFYDKLLIVTIGPVGLLLVLGFTFYLGARPVRKGRFLLADSMRSSGTASTTRALSFMSRSRNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGGVGGSLFAHAFSAIGGGGGGSGXDXXXXXXXXXXXXXXXXXXXXSTGSLSGGEEERRPRARPSARRVWKNGPGDQSDVEQNHLWQLFARHTTMTLIILYLVYTQVSTVVFQAFACEDFDEIGK 257
            F+E+TKVPFPPVYEKFL IIGIFSFDLGW+ISAACLTAGIDFYDKLLIVTIGPVGLLL+LGFTFYLGARPVR GR +      ++ T+ ++   + ++   +G                                + GS+   A         G+            XXXXXXXXXXX            + RARPSARRVW+NGPGD+SD+EQNHLW+LFARHTTM LIILYLVYTQVSTVVFQAFACEDF EIGK
Sbjct:  973 FAEVTKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRTGRVIDMSFRNNTSTSVSSATAATLAAYDSG--------------------------------ISGSVRPRA---------GASDSARGTASTTAXXXXXXXXXXXXXXXXXXXXXXXQGRARPSARRVWRNGPGDESDIEQNHLWELFARHTTMMLIILYLVYTQVSTVVFQAFACEDFPEIGK 1188          
BLAST of mRNA_S-firma_F_contig10345.493.1 vs. uniprot
Match: A0A6H5JRA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA9_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 1.430e-63
Identity = 162/257 (63.04%), Postives = 183/257 (71.21%), Query Frame = 0
Query:    1 FSEITKVPFPPVYEKFLGIIGIFSFDLGWLISAACLTAGIDFYDKLLIVTIGPVGLLLVLGFTFYLGARPVRKGRFLLADSMRSSGTASTTRALSFMSRSRNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGGVGGSLFAHAFSAIGGGGGGSGXDXXXXXXXXXXXXXXXXXXXXSTGSLSGGEEERRPRARPSARRVWKNGPGDQSDVEQNHLWQLFARHTTMTLIILYLVYTQVSTVVFQAFACEDFDEIGK 257
            F+EITKVPFPPVYEKFL IIGIFSFDLGW+ISAACLTAG+DFYDKLLIVTIGPVGLLL+LGFTFYLGARPVRKGR +   S  ++  + ++  ++ +    +G        XXXXXXXXXXXXX       +RG                            XXXXXXXXXXXXXXXX           R+ RARPSARRVW+NGPGD+SD+EQNHLW+LFARHTTM LIILYLVY+QVSTVVFQAFACEDF EIGK
Sbjct: 1432 FAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGVDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRKGRIVDMSSRSTASDSVSSATVATLEAYDSGSSRSVRPQXXXXXXXXXXXXX-------ARG---------------------------TXXXXXXXXXXXXXXXXXXXXXXXXXRARQGRARPSARRVWRNGPGDESDIEQNHLWELFARHTTMMLIILYLVYSQVSTVVFQAFACEDFPEIGK 1654          
BLAST of mRNA_S-firma_F_contig10345.493.1 vs. uniprot
Match: A0A6H5JI42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI42_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 3.130e-43
Identity = 115/257 (44.75%), Postives = 130/257 (50.58%), Query Frame = 0
Query:    1 FSEITKVPFPPVYEKFLGIIGIFSFDLGWLISAACLTAGIDFYDKLLIVTIGPVGLLLVLGFTFYLGARPVRKGRFLLADSMRSSGTASTTRALSFMSRSRNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGGVGGSLFAHAFSAIGGGGGGSGXDXXXXXXXXXXXXXXXXXXXXSTGSLSGGEEERRPRARPSARRVWKNGPGDQSDVEQNHLWQLFARHTTMTLIILYLVYTQVSTVVFQAFACEDFDEIGK 257
            F+EITKVPFPPVYEKFL IIG FSF LGW+ISAACLTAG DFYDKLL+ +     L       +  G     + R   +D  R  GT STT                                        +R G G S  A                                            E  R+ RARPSARRVW++GPGD+SD+EQNHLW+LFARHTTM LIILYLVY+QVSTVVFQAFACEDF EIGK
Sbjct:  214 FAEITKVPFPPVYEKFLSIIGTFSFGLGWVISAACLTAGNDFYDKLLVSSATAATLA-----AYDSGISGSVRTRAGASDPAR--GTTSTTAT--------------------------------------TRRGKGPSRTAXXXXXX-------------------------------------XERARQGRARPSARRVWRSGPGDESDIEQNHLWELFARHTTMMLIILYLVYSQVSTVVFQAFACEDFPEIGK 388          
BLAST of mRNA_S-firma_F_contig10345.493.1 vs. uniprot
Match: D7G0B0_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B0_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 4.430e-43
Identity = 109/257 (42.41%), Postives = 119/257 (46.30%), Query Frame = 0
Query:    1 FSEITKVPFPPVYEKFLGIIGIFSFDLGWLISAACLTAGIDFYDKLLIVTIGPVGLLLVLGFTFYLGARPVRKGRFLLADSMRSSGTASTTRALSFMSRSRNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGGVGGSLFAHAFSAIGGGGGGSGXDXXXXXXXXXXXXXXXXXXXXSTGSLSGGEEERRPRARPSARRVWKNGPGDQSDVEQNHLWQLFARHTTMTLIILYLVYTQVSTVVFQAFACEDFDEIGK 257
            F+EITKVPFPPVYEKFL IIGIFSFDLGW+ISAACLTAGIDFYDKLL                                   R  G + T  A                                                                                        + +  E  R+ RARPSARRVW+NGPGD+SD+EQNHLW+LFARHTTM LIILYLVYTQVSTVVFQAFACEDF EIGK
Sbjct: 1322 FAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGIDFYDKLL-----------------------------------RGKGASRTAMA----------------------------------------------------------------------------------------AAAAAERARQGRARPSARRVWRNGPGDESDLEQNHLWELFARHTTMMLIILYLVYTQVSTVVFQAFACEDFPEIGK 1455          
BLAST of mRNA_S-firma_F_contig10345.493.1 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 2.100e-38
Identity = 103/258 (39.92%), Postives = 126/258 (48.84%), Query Frame = 0
Query:    1 FSEITKVPFPPVYEKFLGIIGIFSFDLGWLISAACLTAGIDFYDKLLIVTIGPVGLLLVLGFTFYLGARPVRKGRFLLADSMRSSGTASTTRALSFMSRSRNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGGVGGSLFAHAFSAIGGGGGGSGXDXXXXXXXXXXXXXXXXXXXXSTGSLSGGEEERRPRAR-PSARRVWKNGPGDQSDVEQNHLWQLFARHTTMTLIILYLVYTQVSTVVFQAFACEDFDEIGK 257
            F++ITK PFPP+YEKFL IIGIFSFDLGW++SAACLT GIDFYDKLLIVTIGP+  L  LG TF++G+RP ++                                                                 ++  +A +A GG  G  G +                     +GS +         AR PS R   +   GD+ + EQ  LW LFARHTTM LI+LYLVYTQ+STVVFQ FACE   EIGK
Sbjct: 1277 FADITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLIVTIGPLVPLCFLGITFFVGSRPAKET----------------------------------------------------------------NMSPNATTADGGASGSGGRELEEGRVQGAC-----------SGSTTSVTANSGAAAREPSVRSALRAKSGDRKNPEQERLWGLFARHTTMMLIVLYLVYTQISTVVFQTFACEHLPEIGK 1459          
BLAST of mRNA_S-firma_F_contig10345.493.1 vs. uniprot
Match: D7G5M2_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5M2_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 2.340e-38
Identity = 117/215 (54.42%), Postives = 129/215 (60.00%), Query Frame = 0
Query:    1 FSEITKVPFPPVYEKFLGIIGIFSFDLGWLISAACLTAGIDFYDKLLIVTIGPVGLLLVLGFTFYLGARPVRKGRFLLADSMRSSGTASTTRALSFMSRSRNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGGVGGSLFAHAFSAIGGGGGGSGXDXXXXXXXXXXXXXXXXXXXXSTGSLSGGEEERRPRARPSARRVWKNGPGDQSDVEQN 215
            F+EITKVPFPPVYEKFL IIGIFSFDLGW++SAACLTAGIDFYDKLLIVTIGPVGLLL+LGFTFYLGARPVRKGR +             TRA S  S S                                     GS+  HA +A               XXXXXXXXXXXXXXXX           R+ RARPSARRVW+NGPGD+SD+EQ+
Sbjct:  705 FAEITKVPFPPVYEKFLSIIGIFSFDLGWMMSAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRKGRVI------------DTRARSNASSS-------------------------------------GSVSPHAPAAS--------DSARGTXXXXXXXXXXXXXXXXXXXXXXXXXRARQGRARPSARRVWRNGPGDESDLEQS 862          
BLAST of mRNA_S-firma_F_contig10345.493.1 vs. uniprot
Match: D7G119_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G119_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 2.090e-36
Identity = 103/255 (40.39%), Postives = 124/255 (48.63%), Query Frame = 0
Query:    3 EITKVPFPPVYEKFLGIIGIFSFDLGWLISAACLTAGIDFYDKLLIVTIGPVGLLLVLGFTFYLGARPVRKGRFLLADSMRSSGTASTTRALSFMSRSRNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGGVGGSLFAHAFSAIGGGGGGSGXDXXXXXXXXXXXXXXXXXXXXSTGSLSGGEEERRPRARPSARRVWKNGPGDQSDVEQNHLWQLFARHTTMTLIILYLVYTQVSTVVFQAFACEDFDEIGK 257
            +ITK PFPP+YEKFL IIGIFSFDLGW++SAACLT GIDFYDKLL+VTIGP+  L  LG TF++G+RP +K             + +TT      S SR G                              G V G+      S +                                    GG   R      S R + +   G Q + EQ  LW LFARHTT+ LI+LYLVYTQ+STVVFQ F+CED  EIGK
Sbjct: 1046 DITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLMVTIGPLLPLCFLGITFFVGSRPAKKTNM----------SPNTTAGGGATSGSRVGEV--------------------------EEGRVQGASSRSMASVM----------------------------------AIGGATARA----QSVRNLLRAKSGQQKNPEQERLWGLFARHTTIMLIVLYLVYTQISTVVFQTFSCEDLPEIGK 1226          
BLAST of mRNA_S-firma_F_contig10345.493.1 vs. uniprot
Match: D7FXY9_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY9_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 1.780e-29
Identity = 93/241 (38.59%), Postives = 113/241 (46.89%), Query Frame = 0
Query:    3 EITKVPFPPVYEKFLGIIGIFSFDLGWLISAACLTAGIDFYDKLLIVTIGPVGLLLVLGFTFYLGARPVRKGRFLLADSMRSSGTASTTRALSFMSRSRNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGGVGGSLFAHAFSAIGGGGGGSGXDXXXXXXXXXXXXXXXXXXXXSTGSLSGGEEERRPRAR-PSARRVWKNGPGDQSDVEQNHLWQLFARHTTMTLIILYLVYTQVSTV 242
            +ITK PFPP+YEKFL IIGIFSFDLGW++SAACLT GIDFYDKLLIVTIGP+  L  LG TF++G+RP ++       +M  + TA          R                                  G V G+                                       S+GS +     R   AR PS R   +   GD  + EQ  LW LFARHTT+ LI+LYLVYTQ+STV
Sbjct: 1086 DITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLIVTIGPLVPLFFLGITFFVGSRPAKE------TNMSPNATAGGXXXXXXXXRE------------------------------LEEGRVQGA---------------------------------------SSGSTTSVTSNRGAAARGPSVRSALRAKSGDPKNPEQQRLWGLFARHTTIMLIVLYLVYTQISTV 1251          
BLAST of mRNA_S-firma_F_contig10345.493.1 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 1.410e-9
Identity = 33/74 (44.59%), Postives = 48/74 (64.86%), Query Frame = 0
Query:    1 FSEITKVPFPPVYEKFLGIIGIFSFDLGWLISAACLTAGIDFYDKLLIVTIGPVGLLLVLGFTFYLGARPVRKG 74
            F  IT V FPP Y +FL  I + SFDLG ++SA+C+   +DFY  LL+ T+GP+G+ +VL  T+++  R    G
Sbjct: 1124 FPSITAVDFPPAYARFLSWIDMLSFDLGHVLSASCVFPVMDFYQSLLLTTLGPLGVAMVLVLTYWIAKRRAGAG 1197          
BLAST of mRNA_S-firma_F_contig10345.493.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 4.790e-9
Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = 0
Query:    1 FSEITKVPFPPVYEKFLGIIGIFSFDLGWLISAACLTAGIDFYDKLLIVTIGPVGLLLVLGFTFYLGARPVRKG 74
            F+ +  V +P VY++FL  +G+F+FDL W++SA C+   +DF+D+LLI TIGP+  LL L +T Y  A  + +G
Sbjct: 1740 FTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVV-VDFHDRLLISTIGPIVALLFLCWT-YAAATRINRG 1811          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10345.493.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D7G0A8_ECTSI2.100e-6456.42Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5JRA9_9PHAE1.430e-6363.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JI42_9PHAE3.130e-4344.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0B0_ECTSI4.430e-4342.41Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5K4A5_9PHAE2.100e-3839.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5M2_ECTSI2.340e-3854.42Probable extracellular nuclease (ISS) n=1 Tax=Ecto... [more]
D7G119_ECTSI2.090e-3640.39Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FXY9_ECTSI1.780e-2938.59Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D7FRH4_ECTSI1.410e-944.59Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7G5Y7_ECTSI4.790e-944.59Polymorphic Outer membrane protein G/I family n=1 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..40
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 69..257
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..68
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..45
NoneNo IPR availableTMHMMTMhelixcoord: 12..31
NoneNo IPR availableTMHMMTMhelixcoord: 229..248
NoneNo IPR availableTMHMMTMhelixcoord: 46..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10345contigS-firma_F_contig10345:2295..4758 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10345.493.1mRNA_S-firma_F_contig10345.493.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10345 2295..4760 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10345.493.1 ID=prot_S-firma_F_contig10345.493.1|Name=mRNA_S-firma_F_contig10345.493.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=257bp
FSEITKVPFPPVYEKFLGIIGIFSFDLGWLISAACLTAGIDFYDKLLIVT
IGPVGLLLVLGFTFYLGARPVRKGRFLLADSMRSSGTASTTRALSFMSRS
RNGGGANSTTSTRRGSASTAESSGGGGGDGNSRGGVGGSLFAHAFSAIGG
GGGGSGGDGNSGGDASSTSRATSTLMPTSTGSLSGGEEERRPRARPSARR
VWKNGPGDQSDVEQNHLWQLFARHTTMTLIILYLVYTQVSTVVFQAFACE
DFDEIGK
back to top