prot_S-firma_M_contig9642.20642.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9642.20642.1
Unique Nameprot_S-firma_M_contig9642.20642.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length372
Homology
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BLAST of mRNA_S-firma_M_contig9642.20642.1 vs. uniprot
Match: A0A6H5JEJ5_9PHAE (ENTH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ5_9PHAE)

HSP 1 Score: 242 bits (617), Expect = 2.780e-69
Identity = 160/232 (68.97%), Postives = 169/232 (72.84%), Query Frame = 0 
Query:  144 TASTSKDDWVPTEVVRAGIGGIDLAAAVGGLRQTGFKPSDVGGKSVFSGQGQRGSDGRHVGAPP-PNQQHRTEHLAPPRPTVEYVEEGQEQGEEVVVRASTREFLGARSGLNKTGLSGRLQETAPSQPXXXXXXXXXXXXXXXXXXXXXXXXGVTGAGQWQGLPQQA---GGGASGAQGPSWQTRQGGLRSTGLMGSGXXXXXXXXXXXXXXXAPASAPWQQGAAGLRRTGL 371
            T S  KD WV TEVVRAGIGGIDLAAAVGGLRQTGFKPSD+GGK+ FSGQGQRGSDGRHV APP   QQ RT +LAPP+P+VEYVEEGQE  EEVVVRASTREFLGARSGLNKTGLSGRLQET     XXXXXXXXX               G+  AGQ QGLPQQ    GGGA G Q PSWQTRQG L++TGL+  G XX               SAPWQQGAAGLRRTGL
Sbjct:  604 TPSAGKD-WVATEVVRAGIGGIDLAAAVGGLRQTGFKPSDIGGKTEFSGQGQRGSDGRHVAAPPLAQQQQRTAYLAPPQPSVEYVEEGQE--EEVVVRASTREFLGARSGLNKTGLSGRLQETPQEPXXXXXXXXXXQAPTPGAASTRPSYQGIPQAGQRQGLPQQXXXXGGGAGGGQPPSWQTRQGELKTTGLIAGGGXXAAQPGASGQQ----GSAPWQQGAAGLRRTGL 828
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9642.20642.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JEJ5_9PHAE2.780e-6968.97ENTH domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9642contigS-firma_M_contig9642:69..1603 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9642.20642.1mRNA_S-firma_M_contig9642.20642.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9642 9..3346 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9642.20642.1 ID=prot_S-firma_M_contig9642.20642.1|Name=mRNA_S-firma_M_contig9642.20642.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=372bp
MQLQMQPQQQQMYQQQQQQPFQQPQQSFQQQASYQQQQPTQQQQQQQPLQ
LMPPQQPQYQQPQPPPQQQQQQQQQQQQQQQQPVAQARQPQPPPPQGQQP
RAAAQQPQTAPAQHHQQPQQQQHQPQQQQTPGQESAQPQPSSSTASTSKD
DWVPTEVVRAGIGGIDLAAAVGGLRQTGFKPSDVGGKSVFSGQGQRGSDG
RHVGAPPPNQQHRTEHLAPPRPTVEYVEEGQEQGEEVVVRASTREFLGAR
SGLNKTGLSGRLQETAPSQPQPQPQQQQQQQQAPAAATAPAPSPGVTGAG
QWQGLPQQAGGGASGAQGPSWQTRQGGLRSTGLMGSGGGGGGGGAGQGQG
EGAPASAPWQQGAAGLRRTGL*
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