mRNA_S-firma_M_contig962.20618.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig962.20618.1 vs. uniprot
Match: D7FQ11_ECTSI (Exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ11_ECTSI) HSP 1 Score: 951 bits (2458), Expect = 0.000e+0 Identity = 639/997 (64.09%), Postives = 707/997 (70.91%), Query Frame = 3
Query: 549 STLAGEPAPEFVEKVPGANKVVVACVSGLGMAKADKSMAA-GACPFLMSCSSVPVRHSLEPARSRGPPRVADVQPGAALMLWGEKPTIPAEEIATMSLTELFRDCEVTFAGSKSAGWKDDVSFHPSLS---------ASTPD-SGVSSXXXXXXXXXXXXXXXXL------------QRRK---------------ATACRGKFWRNQNRDRGKYTLVVEDGGEAAQLRLTWDRWDEEVLRLKEKKGRSIRFEAPDSSLSLTFSCARHLTDEEQKLAQQPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTREQDGDGTSSLSSASSGTH----SSNEVVVRIPLESLDPEAYCLTPAARYRLDMPIRVSEEGPGYVSTEEPMPSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLITPTPAAATEALAESGTVADGEGAKQSGEQEVGGQSENXXXXXXXXXXXXXXXXXXXX-------SAFVPPSAQKLCPIPSGPRKGTVILGVDCEMVYTKEGLALARVTLVNVKGQTVYDELVKPTLQVTDYNTQFSGITAEMLKGVTRTLRDAQREILSFVGAETYLVGHSLDSDLKALRLVHRRLIDTSELYPSSRGMPFKNGLRVLSKTVLGRGIQGGDAGHDSGEDAFASLELALLKMHRGPAFEVPSVWAAKPNPPKESLFESLERRHLSEPLRCKVSGDLEARASAEHPPNTPLWSIFNCGYRREQDAVWAATRFRRKDDDGKGSSSYSSRENPYSSIGDQSGSPTXXXXXXXXXXXXXXXXXXXXXGDRAAVSVTVDAAHFPTAGGMLRDALDSLAPKGKGKEDGSSESPSLLWVDLPCRR-DDFDQDDNDKNWSSLPEVDRAVSQMYDKMAEGTLLVVVCQGALTSMVNLMAKRTKSRWDANSKEKMDVVSGRKRDRAQISTFDRQDEDELEMVTSECLNGMCFL 3389
STLAGE APEFVEKVPGA+KVVVACVSGLGMAKA+ SMA GA PFL SCSSVPVRHSLE R R PRV+DVQPGAALMLWGEKPT+P EEIA MSL E+FRDCEVTFAGSKS GWKDDV+F PS S AS P+ +GV + RRK AT C+GKFWRNQNRD G+YTL V +GGEAA L L+WDRWD+EV+ LK+++ IRFE SL L SCAR LT+EE+ L++ +A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + +S ++ + V+V++PLESL+PEA+CLTPAARYRLDMPIRVSEEGPGYVS+++PMP + XXXXXXXXXXXXXXXXX XXXXXXXXXXXXXX + P+P+ XXXXXXXXXXXXXXXXXXXX FVPPSA +LCPIPSGP KGTV+LG+DCEM+YT EGL LAR TLVNVKGQTVYD+LVKPTL+VTDYNTQFSGIT EMLKGVTRTLRDAQREILSFV AETYLVGHSLDSDL+ALRLVHRRLIDTSELYP+ RG+PFKNGLRVLSKTVLGR IQGGDAGHDSGEDAFASLELALLKMHRGPAFE+PSVWAAKPNPPKESLFESLERR + PLRCKVSGDLEAR SAEHPP TPLWS+FNCGYRREQDAVWAATRF D + +S+E SS+ QS R A +VTVDAAHFPTAGGMLRDAL SLAP G PSLLWVDLPC +DFD D D+ WSSL EVDRAVSQ+YDKMAEGTLLVVVCQGALTSMVNL AKRTKS+WDA SKE+MD ++G+KRD +QISTFDR+DED+L M TSECLNGMCFL
Sbjct: 2 STLAGEQAPEFVEKVPGADKVVVACVSGLGMAKAEMSMAEEGAYPFLSSCSSVPVRHSLEAGRGRSAPRVSDVQPGAALMLWGEKPTVPMEEIAAMSLVEVFRDCEVTFAGSKSPGWKDDVTFLPSSSSASSETHPPASKPEPAGVGDGVGGGGTEQGDPGPAAIGGEEGQVGIETPTRRKXXXXXXXXXXXXXXXATTCQGKFWRNQNRDSGRYTLEVGEGGEAAVLTLSWDRWDDEVVVLKDRR-LGIRFEGKGHSLWLNLSCARRLTNEEKSLSKSAQAASTPVLRVVAVDSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTAEPSSKMNHGGXXXXXVDGDEDVVMVKVPLESLNPEAFCLTPAARYRLDMPIRVSEEGPGYVSSDQPMPPRTQEXXXXXXXXXXXXXXXXXRIWDKAQAHRXXXXXXXXXXXXXXGAIKEEDGEVVLG----IEAPSPSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGEFVPPSAGRLCPIPSGPHKGTVMLGLDCEMIYTSEGLELARATLVNVKGQTVYDKLVKPTLKVTDYNTQFSGITPEMLKGVTRTLRDAQREILSFVDAETYLVGHSLDSDLRALRLVHRRLIDTSELYPNLRGIPFKNGLRVLSKTVLGRAIQGGDAGHDSGEDAFASLELALLKMHRGPAFELPSVWAAKPNPPKESLFESLERREPTRPLRCKVSGDLEARGSAEHPPGTPLWSVFNCGYRREQDAVWAATRFGHTDREA------TSQEQSASSVTVQSNGKDGVSPAPATADPTAVAAPGGQA--RTAPAVTVDAAHFPTAGGMLRDALGSLAPAGSPPP-----PPSLLWVDLPCDPPNDFDHDGGDRQWSSLAEVDRAVSQLYDKMAEGTLLVVVCQGALTSMVNLAAKRTKSKWDATSKERMDTIAGKKRDHSQISTFDRRDEDDLVMATSECLNGMCFL 980
BLAST of mRNA_S-firma_M_contig962.20618.1 vs. uniprot
Match: A0A6H5KCV4_9PHAE (Exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV4_9PHAE) HSP 1 Score: 375 bits (964), Expect = 2.300e-112 Identity = 310/584 (53.08%), Postives = 349/584 (59.76%), Query Frame = 3
Query: 810 PAEEIATMSLTELFRDCEVTFAGSKSAGWKDDVSFHPSLSASTPDS--------------------GVSSXXXXXXXXXXXXXXXXLQ---RRK------------------ATACRGKFWRNQNRDRGKYTLVVEDGGEAAQLRLTWDRWDEEVLRLKEKKGRSIRFEAPDSSLSLTFSCARHLTDEEQKL---AQQPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTREQDGDGTSSLSSASSGTHSSNE--VVVRIPLESLDPEAYCLTPAARYRLDMPIRVSEEGPGYVSTEEPMPSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLITPTPAAATEALAESGTVADGEGAKQSGEQEVGGQSENXXXXXXXXXXXXXXXXXXXX-------SAFVPPSAQKLCPIPSGPRKGTVILGVDCEMVYTKEGLALARVTLVNVKGQTVYDELVKPTLQVTDYNTQFSGITAEMLKGVTRTLRDAQREILSFVGAETYLVGHSLDSDLKALRLVHRRLIDTSELYPSSRGMPFK 2402
P+ T SL E+FRDCEVTFAGSKS GWKDDV+F PS S+++ ++ G ++ RR AT C+GKFWRNQNRD G+YTL V DGGEAA L L+WDRWD+EV+ LK++K IRFE SL L +CAR LTDEE+ L AQ A T E +S +S SG ++ VVVR+PLESLDPEA+CLTPAARYRLDMPIRVSEEGPGYVS+++PM + XXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX L P+ + XXXXXXXXXXXXXXXXXXXX FVPPSA +LCPIPSGP KGTV+LG+DCEMVYT EGL LAR TLVNVKGQ VYD+LVKPTL+VTDYNTQFSGIT EMLKGVTRTLRDAQREILSFV AETYLVGHSLDSDL+ALRLVHRRLIDTSELYP+ RG+PFK
Sbjct: 23 PSTPRQTKSLIEVFRDCEVTFAGSKSPGWKDDVTFLPSSSSASSETHPPTSKPEPAGGGGDGIGEGGTEQGDPGPAATGGEEGQLGIETPTRRXXXXXXXXXXXXXXXXXXXATTCQGKFWRNQNRDSGRYTLEVGDGGEAAVLTLSWDRWDDEVVVLKDRK-LGIRFEGKGHSLRLNLACARRLTDEEKMLSRSAQVASAPVLRVVAVGSSSIPTPTPAIEQTNKRASESSEPAKTAAGALAAGTAEP----SSKMSHGGSGNGDGDDGVVVVRVPLESLDPEAFCLTPAARYRLDMPIRVSEEGPGYVSSDQPMAPRTQEXXXXXXXXXXXXXXXXXKIWDKAQAHRXXXXXXXXXXXXXXXXXXXXGAIKEEDGEVVLGIEAPSPSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGEFVPPSADRLCPIPSGPHKGTVMLGLDCEMVYTSEGLELARATLVNVKGQMVYDKLVKPTLKVTDYNTQFSGITPEMLKGVTRTLRDAQREILSFVDAETYLVGHSLDSDLRALRLVHRRLIDTSELYPNPRGIPFK 601
BLAST of mRNA_S-firma_M_contig962.20618.1 vs. uniprot
Match: A0A6H5KES4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KES4_9PHAE) HSP 1 Score: 363 bits (932), Expect = 2.420e-112 Identity = 195/292 (66.78%), Postives = 212/292 (72.60%), Query Frame = 3
Query: 2517 MHRGPAFEVPSVWAAKPNPPKESLFESLERRHLSEPLRCKVSGDLEARASAEHPPNTPLWSIFNCGYRREQDAVWAATRFRRKDDDGKGSSSYSSRENPYSSIGDQSGSPTXXXXXXXXXXXXXXXXXXXXXGDRAAVSVTVDAAHFPTAGGMLRDALDSLAPKGKGKEDGSSESPSLLWVDLPCRR-DDFDQDDNDKNWSSLPEVDRAVSQMYDKMAEGTLLVVVCQGALTSMVNLMAKRTKSRWDANSKEKMDVVSGRKRDRAQISTFDRQDEDELEMVTSECLNGMCFL 3389
MHRGPAFE+PSVWAAKPNPPKESLFESLERR + LRCKVSGDLEAR SAEHPP TPLWS+FNCGYRREQDAVWAATRF D + S SS S G SPT R A +VTVDAAHFPTAGGMLRDAL SLAP G PSLLWVDLPC +DFD D D+ WSSL EVDRAVSQ+YDKMAEGTLLVVVCQGALTSMVNL AKR KS+WDA SKE+MD ++G+KRD +Q+STFDR+DED+L TSECLNGMCFL
Sbjct: 1 MHRGPAFELPSVWAAKPNPPKESLFESLERREPTRALRCKVSGDLEARGSAEHPPGTPLWSVFNCGYRREQDAVWAATRFGHTDREAT-SQEQSSSSVTVQSNGKDGVSPTPATADPTAVAAPGGQA-------RTAPAVTVDAAHFPTAGGMLRDALGSLAPAGSPPP-----PPSLLWVDLPCDPPNDFDGDGGDRQWSSLAEVDRAVSQLYDKMAEGTLLVVVCQGALTSMVNLAAKRIKSKWDATSKERMDTIAGKKRDHSQLSTFDRRDEDDLMTATSECLNGMCFL 279
BLAST of mRNA_S-firma_M_contig962.20618.1 vs. uniprot
Match: A0A836CFL3_9STRA (Exonuclease domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFL3_9STRA) HSP 1 Score: 289 bits (739), Expect = 1.150e-81 Identity = 182/481 (37.84%), Postives = 257/481 (53.43%), Query Frame = 3
Query: 2037 GPRKGTVILGVDCEMVYTKEGLALARVTLVNVKGQTVYDELVKPTLQVTDYNTQFSGITAEMLKGVTRTLRDAQREILSFVGAETYLVGHSLDSDLKALRLVHRRLIDTSELYPSSRGMPFKNGLRVLSKTVLGRGIQGGD--AGHDSGEDAFASLELALLKMHRGPAFEVPSVWAAKPNPPKESLFESLERRH--LSEPLRCKVSGDLEARASAEHPPNTPLWSIFNCGYRREQDAVWAATRFRRKDDDGK-----GSSSYSSRENPYSSIGDQSGSPTXXXXXXXXXXXXXXXXXXXXXGDRAAVSVTVDAAHFPTAGGMLRDALDSLAPKGKGKEDGSSESPSLLWVDLPCRR---------------------DDFDQDDNDKNWSSLPEVDRAVSQMYDKMAEGTLLVVVCQGALTSMVNLMAKRTKSRWDANSKEKMDVVSGRKRDRAQISTFDRQDEDELEMVTSECLNGMCFL 3389
G +G +LG+DCEMV TK+GL LARV+LVN +G+ VYD V+P+ VT+++T++SGITA L+GVT TL+D Q ++L + + TYLVGHSLD DL+ALRLVH R+IDT+ LYPS +GMP+K GLR L K +LGR +Q G +GHDS DA A++ELALLKM +G +P WA++P PP++ +F++L R +EPL V+GD E R ++ P + LW+ F GYRRE DA W A + R + G + + R Y GD+ G G+ A+ V A + P LLWVDLPC D D+ + K+W+S+ +VD A ++YD GTL+VVVCQG L M +L + + K +W A + E+ V+G R + +E+E+ L+G+ FL
Sbjct: 91 GHARGFKLLGIDCEMVETKKGLELARVSLVNARGEAVYDRHVRPSAPVTNHHTEYSGITAAHLEGVTATLKDVQADLLPLLDSHTYLVGHSLDGDLRALRLVHPRIIDTAVLYPSPKGMPYKRGLRQLCKELLGRDVQPGSGVSGHDSIMDAAAAMELALLKMAKGSTQGLPVPWASEPLPPRQPIFDALSRARSPTAEPLMISVAGDFEGRLDPQYRPESKLWTCFANGYRREADAAWLALQQRWPPTAAECNRHMGDAPFRVRHR-YGGQGDKGG------------------LLIDVAGNCASAEGIVAAXXXXXXXXXXXXXXXXXXXXXXXXXXHAP--PHLLWVDLPCSPTQHPKAHGGSANARNVADSGGSDGDEGEAPKHWTSIGDVDAAARRLYDAAPPGTLVVVVCQGTLDVMRSLQSIKLKCKWAAKAAEENSAVAGSGPPRP----WPPGEEEEMVSAAKAALDGVTFL 546
BLAST of mRNA_S-firma_M_contig962.20618.1 vs. uniprot
Match: A0A7S3XWP5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWP5_HETAK) HSP 1 Score: 178 bits (451), Expect = 6.650e-48 Identity = 83/146 (56.85%), Postives = 113/146 (77.40%), Query Frame = 3
Query: 2085 YTKEGLALARVTLVNVKGQTVYDELVKPTLQVTDYNTQFSGITAEMLKGVTRTLRDAQREILSFVGAETYLVGHSLDSDLKALRLVHRRLIDTSELYPSSRGMPFKNGLRVLSKTVLGRGIQGGDAGHDSGEDAFASLELALLKMH 2522
YT+ GL L RVTLVN K +T+YD +VKP +TD+NTQ+SGIT + ++G T L++AQ +++ F+G ETY+ GHS+DSDL+AL+L+H R+IDT+ LYPS RG+PFKN L+ L+K LGR IQ + GHDS +DA A+L+L LLK H
Sbjct: 1 YTEAGLELTRVTLVNHKSETLYDTIVKPARPITDFNTQYSGITEKDMQGPTVNLQEAQAKLMEFIGPETYVAGHSIDSDLRALKLIHHRIIDTAVLYPSPRGLPFKNSLKNLTKRYLGRQIQESEDGHDSAQDAVATLQLVLLKAH 146
BLAST of mRNA_S-firma_M_contig962.20618.1 vs. uniprot
Match: A0A1Y1IAJ6_KLENI (Exonuclease family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IAJ6_KLENI) HSP 1 Score: 190 bits (482), Expect = 2.970e-46 Identity = 98/168 (58.33%), Postives = 124/168 (73.81%), Query Frame = 3
Query: 2034 SGPRKGTVILGVDCEMVYTKEGLALARVTLVNVKGQTVYDELVKPTLQVTDYNTQFSGITAEMLKGVTRTLRDAQREILSFVGAETYLVGHSLDSDLKALRLVHRRLIDTSELYPSSRGMPFKNGLRVLSKTVLGRGIQGGDAGHDSGEDAFASLELALLKMHRGPAF 2537
+G +K ++ VDCEM YT+ GL L RVTLV+ KG+ + D+LVKPT + DYNT+FSGITAEML+ VT TL+D Q E+L V AET LVGHSL SDL+AL+L+H IDT+ +P RG P+K LRVL++ L R IQGGD GHDS EDA A++ELA LK+ GP+F
Sbjct: 383 AGTKKRQPMVAVDCEMCYTEAGLELTRVTLVSGKGKVLLDKLVKPTNPIRDYNTKFSGITAEMLQDVTTTLQDIQAELLELVSAETILVGHSLQSDLQALKLIHGNNIDTALAFPHPRGPPYKPALRVLAERHLHRTIQGGDKGHDSVEDARATMELAQLKIQNGPSF 550
BLAST of mRNA_S-firma_M_contig962.20618.1 vs. uniprot
Match: R0FEE8_9BRAS (Exonuclease domain-containing protein n=2 Tax=Camelineae TaxID=980083 RepID=R0FEE8_9BRAS) HSP 1 Score: 185 bits (469), Expect = 1.080e-45 Identity = 104/225 (46.22%), Postives = 146/225 (64.89%), Query Frame = 3
Query: 2025 PIPSGPRKGTVILGVDCEMVYTKEGLALARVTLVNVKGQTVYDELVKPTLQVTDYNTQFSGITAEMLKGVTRTLRDAQREILSFVGAETYLVGHSLDSDLKALRLVHRRLIDTSELYPSSRGMPFKNGLRVLSKTVLGRGIQGGDAGHDSGEDAFASLELALLKMHRGPAFEVPSVWAAKPNPPKESLFESLERRHLSEPLRCKVSGDLEARASAEHPPNTPLWS 2699
P PSG ++ +DCEM +TKEGL L RVTLV+V+GQ + D+LVKPT +TDYNT++SGITA M++GVT TL+D Q E L V ET LVGHSL++DL +L++ H +IDT+ LY RG +K LR+L+K L R IQ ++GHDS EDA A+++LALLK+ GP F +P P +++LF L S + K++ + R ++E + P+ S
Sbjct: 208 PAPSGSSPHEIV-ALDCEMCFTKEGLELTRVTLVDVQGQVLLDKLVKPTNPITDYNTRYSGITAVMMEGVTTTLKDIQEEFLKLVFKETILVGHSLENDLFSLKISHNLVIDTAVLYKHPRGRSYKTKLRILAKKFLAREIQLSESGHDSAEDAKAAMDLALLKIKHGPDFGLP------PEVIRKNLFTILNESGKSTSIIDKIN--IVKRYASESSNSIPVSS 423
BLAST of mRNA_S-firma_M_contig962.20618.1 vs. uniprot
Match: UPI000CD9378F (small RNA degrading nuclease 5 isoform X4 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9378F) HSP 1 Score: 181 bits (460), Expect = 1.300e-45 Identity = 94/169 (55.62%), Postives = 118/169 (69.82%), Query Frame = 3
Query: 2058 ILGVDCEMVYTKEGLALARVTLVNVKGQTVYDELVKPTLQVTDYNTQFSGITAEMLKGVTRTLRDAQREILSFVGAETYLVGHSLDSDLKALRLVHRRLIDTSELYPSSRGMPFKNGLRVLSKTVLGRGIQGGDAGHDSGEDAFASLELALLKMHRGPAFEVPSVWAAK 2564
I+GVDCEM T EG L RVTL++ KGQ + D+LVKPT +TDYNT++SGIT+EML GVT TL+D Q E L V ET LVGHSL++DL AL++ H +IDT+ LY SRG +K LRVL++ L R IQG GHDS EDA A+++LA LK+ GP F P + K
Sbjct: 211 IVGVDCEMCITNEGFELTRVTLIDFKGQVLLDKLVKPTNAITDYNTRYSGITSEMLNGVTTTLKDIQEEFLQIVNRETILVGHSLENDLLALKICHNLVIDTAVLYKHSRGGTYKIALRVLTRKFLEREIQGSGNGHDSIEDAKAAMDLAFLKIKNGPDFGRPPSFTRK 379
BLAST of mRNA_S-firma_M_contig962.20618.1 vs. uniprot
Match: A0A2P2LGX3_RHIMU (Small RNA degrading nuclease 5 isoform X2 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LGX3_RHIMU) HSP 1 Score: 180 bits (457), Expect = 2.240e-45 Identity = 108/231 (46.75%), Postives = 142/231 (61.47%), Query Frame = 3
Query: 2058 ILGVDCEMVYTKEGLALARVTLVNVKGQTVYDELVKPTLQVTDYNTQFSGITAEMLKGVTRTLRDAQREILSFVGAETYLVGHSLDSDLKALRLVHRRLIDTSELYPSSRGMPFKNGLRVLSKTVLGRGIQGGDAGHDSGEDAFASLELALLKMHRGPAFEVPSVWAAKPNPP------KESLF---ESLERRHLSEPLRC-KVSGD----LEARASAEHPPNTPLWSIFN 2708
IL +DCEM ++EG L RVT+V+VKGQ V D+LVKP+ + DYNT+FSGIT EML+GVT +L+D Q L V ET LVGHSL++DL AL++ H +IDT+ LY RG +K LRVL+K L R IQ D GHDS EDA A++ELALLK+ GP F P + + P K S F S+ +R+ SE VS D L+A A++ +W+ F+
Sbjct: 73 ILALDCEMCISREGFELTRVTMVDVKGQVVLDKLVKPSNDIVDYNTRFSGITCEMLEGVTTSLKDVQENFLKLVCKETILVGHSLENDLLALKISHESVIDTALLYKHPRGGSYKTALRVLAKRFLSREIQQSDVGHDSIEDAKAAMELALLKIRNGPDFGSPPSFLRRKLPTVLSECGKISSFIDNVSIIKRYASESTHAIPVSSDDEALLKAMKEAKNDRIHFIWTQFS 303
BLAST of mRNA_S-firma_M_contig962.20618.1 vs. uniprot
Match: A0A8J5UZE9_ZIZPA (Exonuclease domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5UZE9_ZIZPA) HSP 1 Score: 176 bits (447), Expect = 3.540e-45 Identity = 108/220 (49.09%), Postives = 132/220 (60.00%), Query Frame = 3
Query: 2007 SAQKLCPIPSGPRKGTV-ILGVDCEMVYTKEGLALARVTLVNVKGQTVYDELVKPTLQVTDYNTQFSGITAEMLKGVTRTLRDAQREILSFVGAETYLVGHSLDSDLKALRLVHRRLIDTSELYPSSRGMPFKNGLRVLSKTVLGRGIQGGDAGHDSGEDAFASLELALLKMHRGPAFEVPSVWAAKPNPPKESLFESLERRHLSEPL-----RCKVSGD 2648
S Q P S P + IL +DCEM T+ G L RVTLV++KG+ V D+LVKP +TDYNT+FSGITAEML VT TL++ Q E + V ET LVGHSL++DL ALR+ H +IDT+ LY +RG FK LRVL+K L R IQ +GHDS EDA A+LELALLK+ GP F P SL RR LS L +C + D
Sbjct: 54 SLQGFVPTVSAPPGSSYEILALDCEMCVTEAGFELTRVTLVDIKGEVVLDKLVKPANPITDYNTRFSGITAEMLADVTTTLQEIQEEFVGLVHKETVLVGHSLENDLTALRISHDLIIDTAILYKHNRGHHFKIALRVLAKKFLSREIQNTGSGHDSVEDAKAALELALLKIKYGPDFGSPP---------------SLSRRKLSSVLHESGKKCSLIDD 258 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig962.20618.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig962.20618.1 >prot_S-firma_M_contig962.20618.1 ID=prot_S-firma_M_contig962.20618.1|Name=mRNA_S-firma_M_contig962.20618.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=1133bp MSSFQHRGSPRAAESGGQEPPRKRQKGVNVPAQGQQQHQQQAPQQHLQQPback to top mRNA from alignment at S-firma_M_contig962:3824..15400+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig962.20618.1 ID=mRNA_S-firma_M_contig962.20618.1|Name=mRNA_S-firma_M_contig962.20618.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=11577bp|location=Sequence derived from alignment at S-firma_M_contig962:3824..15400+ (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig962:3824..15400+ >mRNA_S-firma_M_contig962.20618.1 ID=mRNA_S-firma_M_contig962.20618.1|Name=mRNA_S-firma_M_contig962.20618.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=6798bp|location=Sequence derived from alignment at S-firma_M_contig962:3824..15400+ (Sphaerotrichia firma Sfir_13m male)back to top |