prot_S-firma_M_contig95.20485.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-firma_M_contig95.20485.1
Unique Name	prot_S-firma_M_contig95.20485.1
Type	polypeptide
Organism	Sphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length	593

Homology

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BLAST of mRNA_S-firma_M_contig95.20485.1 vs. uniprot
Match: D7G6G6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6G6_ECTSI)

HSP 1 Score: 645 bits (1664), Expect = 2.610e-224
Identity = 379/666 (56.91%), Postives = 421/666 (63.21%), Query Frame = 0

Query:    1 MEGLLKDGLLQLLQYFHNPELVGSLLLLYVFHVVGLTVNIPHLFLNGLKFIVAPTEEAVLRIRSDAKGPRPDPLGQLDREGKEANAYDKMDALSLARMEISRGTVGTLMYFPHYEGMVWWSLVGLGNFFIAQGSRCAIPTQ---------------------------------------------------------------------------------------RPLGWASVTLCAALLRAWWCNVRLVYLLGSGNDHSKFAVLCGFCGMFAAAGAGAMFPPGFFAFDLRAAAVALHAWGRGAAGAAAGLFLSSTAXXXXXXXXXXXXXXXXXGISEEDFVALFLPVAVFTAACVTAAAALPAIRFAQYFVRALEPGSGASFVYRALLVVDVLLPWLATLVWISAVPPLFLGWWGGAGEEETLGDGTGLALRVWVTGSAAAARLLVGRFQIQAYLEGAKESVLKDLRQRKVNAHMVRSKFDARFQYLIIAAAQYAAPALTVIFSLAILVHIGXXXXXXXXXXXXXXXXXXXXGGFAAGDVGAGENRLGLCDAARRIVGLEPWDAAFAAAAAVVEKSGAAGSE--------GGSVASSGGLAGCLRNMPAFPEAFWSGVAGFLAWWACLSWAVTYATGVVFWRVYPEDVSAVEISRSDTTTKG 571
            MEG + D LL+LL+YFHNPELVGSLLLLYV HVVG TVNIPHLFLNGLKFIVAPT+EAVLRIRSDAKGPRP+PLGQLDREGK+ANAYDKMDAL LARME+SRGT+G LMYFP YEGMV W+++ LGNFFIAQGSRCAIPTQ                                                                                       RPLGWAS+TLC ALLR WWCNVRL+YLLG  ND+SKFA+L GFCG+FAAA   AM PP F AFD+RAAA ALHAWG    G       S  A                  +S EDF+A+FLP     AACVTAAAALPAIRF+QYF RAL  GSGA+ VYRALLVVD +LPWLA+LVWIS VPPL LG   G G+      G  LALRV VTG AA ARL VG+ Q+QAYLEG KESVL DLR++KV++  VRSKFDAR QYL+IAAAQYAAPALTV+FSLA+LVH+G                    GG  A   G G   LG+CDAARR+VGLE W  AFAAAA   E   +            GG     GGLA  +  +P FPEAFWSGV GFLAWWACLSWAVTYA GV FW V+PEDVS  E   +D TTKG
Sbjct:    1 MEGPVADALLKLLRYFHNPELVGSLLLLYVVHVVGFTVNIPHLFLNGLKFIVAPTQEAVLRIRSDAKGPRPEPLGQLDREGKDANAYDKMDALGLARMEVSRGTLGGLMYFPQYEGMVLWAVIALGNFFIAQGSRCAIPTQTKCEHRGSAKKEKSPRSGAFCTANLVHSLPSAFFDALRCPPTSSFGVPIAHLDSCLLLLPQTPFTPSFSLALFDVLLLLWRDPSGGGRPLGWASLTLCGALLRCWWCNVRLIYLLGLNNDYSKFALLSGFCGLFAAAAVAAMLPPSFLAFDVRAAAAALHAWGGAVRGG------SDAAVPPGGVSAV---------VSREDFLAMFLPTVAVVAACVTAAAALPAIRFSQYFSRALGRGSGATLVYRALLVVDGVLPWLASLVWISEVPPLVLGERWGGGDA-----GRALALRVGVTGLAAWARLAVGKLQLQAYLEGVKESVLVDLREKKVDSQSVRSKFDARLQYLVIAAAQYAAPALTVLFSLALLVHVGDAAT----------------GGDLASGTG-GRAGLGVCDAARRVVGLESWGTAFAAAAGAAEAPNSXXXXXXXXXXGLGG-----GGLAAFISTIPEFPEAFWSGVTGFLAWWACLSWAVTYAVGVAFWFVFPEDVSVTERVPTDRTTKG 624

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_M_contig95.20485.1 vs. uniprot

BLAST of mRNA_S-firma_M_contig95.20485.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G6G6_ECTSI	2.610e-224	56.91	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019395	Transmembrane protein 161A/B	PFAM	PF10268	Tmemb_161AB	coord: 266..551 e-value: 4.2E-20 score: 71.9
IPR019395	Transmembrane protein 161A/B	PANTHER	PTHR13624	FAMILY NOT NAMED	coord: 24..553
None	No IPR available	PANTHER	PTHR13624:SF6	DBJ\|BAA83359.1	coord: 24..553
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 41..116
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 167..177
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 279..298
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 324..342
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 299..323
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 523..550
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 117..134
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 551..592
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 429..522
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 178..197
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 364..400
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 198..256
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 343..363
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 146..166
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 135..145
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 257..278
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 401..428
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..40
None	No IPR available	TMHMM	TMhelix		coord: 346..363
None	No IPR available	TMHMM	TMhelix		coord: 21..43
None	No IPR available	TMHMM	TMhelix		coord: 404..426
None	No IPR available	TMHMM	TMhelix		coord: 309..331
None	No IPR available	TMHMM	TMhelix		coord: 143..160
None	No IPR available	TMHMM	TMhelix		coord: 215..237
None	No IPR available	TMHMM	TMhelix		coord: 180..202
None	No IPR available	TMHMM	TMhelix		coord: 530..552
None	No IPR available	TMHMM	TMhelix		coord: 108..130
None	No IPR available	TMHMM	TMhelix		coord: 257..279

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-firma_M_contig95	contig	S-firma_M_contig95:31291..37069 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male	2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90	2022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-firma_M_contig95.20485.1	mRNA_S-firma_M_contig95.20485.1	Sphaerotrichia firma Sfir_13m male	mRNA	S-firma_M_contig95 31259..37160 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-firma_M_contig95.20485.1 ID=prot_S-firma_M_contig95.20485.1|Name=mRNA_S-firma_M_contig95.20485.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=593bp
MEGLLKDGLLQLLQYFHNPELVGSLLLLYVFHVVGLTVNIPHLFLNGLKF
IVAPTEEAVLRIRSDAKGPRPDPLGQLDREGKEANAYDKMDALSLARMEI
SRGTVGTLMYFPHYEGMVWWSLVGLGNFFIAQGSRCAIPTQRPLGWASVT
LCAALLRAWWCNVRLVYLLGSGNDHSKFAVLCGFCGMFAAAGAGAMFPPG
FFAFDLRAAAVALHAWGRGAAGAAAGLFLSSTAETDVGEGDGGGGGGAGG
GISEEDFVALFLPVAVFTAACVTAAAALPAIRFAQYFVRALEPGSGASFV
YRALLVVDVLLPWLATLVWISAVPPLFLGWWGGAGEEETLGDGTGLALRV
WVTGSAAAARLLVGRFQIQAYLEGAKESVLKDLRQRKVNAHMVRSKFDAR
FQYLIIAAAQYAAPALTVIFSLAILVHIGGGGGSGTVVGGSSSLSGAAAG
GFAAGDVGAGENRLGLCDAARRIVGLEPWDAAFAAAAAVVEKSGAAGSEG
GSVASSGGLAGCLRNMPAFPEAFWSGVAGFLAWWACLSWAVTYATGVVFW
RVYPEDVSAVEISRSDTTTKGKKEKGKGKAKAKGASKGGGER*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019395	Transmembrane_161A/B