prot_S-firma_M_contig944.20424.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig944.20424.1
Unique Nameprot_S-firma_M_contig944.20424.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length131
Homology
[Close]
BLAST of mRNA_S-firma_M_contig944.20424.1 vs. uniprot
Match: D7G6S7_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6S7_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 2.860e-89
Identity = 123/127 (96.85%), Postives = 123/127 (96.85%), Query Frame = 0 
Query:    1 MAAETKGQEAQDVEMSESAGKGPEPGIGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 127
            MAAETKGQE QDV M ES GKGPEPGIGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL
Sbjct:    1 MAAETKGQEPQDVVMGES-GKGPEPGIGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 126
[Close]
BLAST of mRNA_S-firma_M_contig944.20424.1 vs. uniprot
Match: A0A7S2Y0P1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0P1_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.600e-73
Identity = 105/127 (82.68%), Postives = 110/127 (86.61%), Query Frame = 0 
Query:    1 MAAETKGQEAQDVEMSESAGKGPEPGIGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 127
            MAAETKG+   DVEM ++             PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLS+AFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIE+IPGYGSL
Sbjct:    1 MAAETKGET--DVEMLDAK-------ESSNVPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSVAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIEKIPGYGSL 118
[Close]
BLAST of mRNA_S-firma_M_contig944.20424.1 vs. uniprot
Match: A0A6U3THL3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3THL3_9STRA)

HSP 1 Score: 216 bits (551), Expect = 1.360e-70
Identity = 98/118 (83.05%), Postives = 104/118 (88.14%), Query Frame = 0 
Query:   12 DVEMSESAGKGPE--PGIGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 127
            DVEMS++A   P+  P      PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWL+TRSVCPLCNKEW+FAKIERIPGYG L
Sbjct:   14 DVEMSDAAASEPKKKPSKALAPPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLRTRSVCPLCNKEWDFAKIERIPGYGQL 131
[Close]
BLAST of mRNA_S-firma_M_contig944.20424.1 vs. uniprot
Match: A0A7S3K273_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K273_9STRA)

HSP 1 Score: 217 bits (552), Expect = 2.260e-70
Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 0 
Query:   32 PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 127
            P+FEIKKWNA+ MWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL
Sbjct:   62 PKFEIKKWNAICMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 157
[Close]
BLAST of mRNA_S-firma_M_contig944.20424.1 vs. uniprot
Match: A0A1E7FMU3_9STRA (Ring-box protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMU3_9STRA)

HSP 1 Score: 214 bits (546), Expect = 6.460e-70
Identity = 93/101 (92.08%), Postives = 96/101 (95.05%), Query Frame = 0 
Query:   27 IGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 127
            +G  APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct:   25 VGSAAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 125
[Close]
BLAST of mRNA_S-firma_M_contig944.20424.1 vs. uniprot
Match: A0A4D9CQ35_9STRA (RING-type domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQ35_9STRA)

HSP 1 Score: 214 bits (546), Expect = 9.910e-70
Identity = 101/138 (73.19%), Postives = 105/138 (76.09%), Query Frame = 0 
Query:    1 MAAETKGQEAQDVEMSESAGKGPEPGIG-----------QVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 127
            MA E KG    D +     G G E G G             APRFEIKKWNAV MWSWDICADTCAICRN+LNEPSIEYQANPSPNNENGLSIAFGCC HVFHLDCIQRWLK RSVCPLCNKEWEF+KIERIPGY +L
Sbjct:    1 MAEEAKGMVGMDEDRPVPHGGGAEEGCGLGGSTSGSTSGAAAPRFEIKKWNAVTMWSWDICADTCAICRNNLNEPSIEYQANPSPNNENGLSIAFGCCSHVFHLDCIQRWLKARSVCPLCNKEWEFSKIERIPGYNAL 138
[Close]
BLAST of mRNA_S-firma_M_contig944.20424.1 vs. uniprot
Match: B7G7T1_PHATC (Predicted protein n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7T1_PHATC)

HSP 1 Score: 213 bits (543), Expect = 2.330e-69
Identity = 100/125 (80.00%), Postives = 107/125 (85.60%), Query Frame = 0 
Query:    8 QEAQDVEMSESA-GKGPE----PGIGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 127
            ++++DVEM E+  G   E    P     APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct:    8 EDSKDVEMEETVEGADSEEVVKPKASGSAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 132
[Close]
BLAST of mRNA_S-firma_M_contig944.20424.1 vs. uniprot
Match: A0A7S3PD50_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PD50_9STRA)

HSP 1 Score: 212 bits (540), Expect = 5.860e-69
Identity = 101/129 (78.29%), Postives = 106/129 (82.17%), Query Frame = 0 
Query:   10 AQDVEMSES-----------AGKGPEPGIGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 127
            A+DVEMS++           A K P       APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct:    6 AKDVEMSDAPAEDSKEESKPAAKDPN------APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 128
[Close]
BLAST of mRNA_S-firma_M_contig944.20424.1 vs. uniprot
Match: A0A7S1UML7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UML7_9STRA)

HSP 1 Score: 213 bits (543), Expect = 7.620e-69
Identity = 99/123 (80.49%), Postives = 105/123 (85.37%), Query Frame = 0 
Query:    8 QEAQDVEMSESAG---KGPEPGIGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 127
            +E +DV M ++A    K P       APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct:   46 EETKDVAMKDAAAPPAKKPAAKGSGPAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 168
[Close]
BLAST of mRNA_S-firma_M_contig944.20424.1 vs. uniprot
Match: A0A1Z5J6S6_FISSO (RING-box protein 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6S6_FISSO)

HSP 1 Score: 211 bits (536), Expect = 1.780e-68
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0 
Query:   31 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWLKTRSVCPLCNKEWEFAKIERIPGYGSL 127
            APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSP N+NGLSIAFG CGHVFHLDCIQRWLKTRSVCPLCNKEW+FAKIERIPGYG L
Sbjct:   23 APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQANPSPTNDNGLSIAFGNCGHVFHLDCIQRWLKTRSVCPLCNKEWDFAKIERIPGYGQL 119
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig944.20424.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6S7_ECTSI2.860e-8996.85RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S2Y0P1_9STRA1.600e-7382.68Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6U3THL3_9STRA1.360e-7083.05Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S3K273_9STRA2.260e-7096.88Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A1E7FMU3_9STRA6.460e-7092.08Ring-box protein n=1 Tax=Fragilariopsis cylindrus ... [more]
A0A4D9CQ35_9STRA9.910e-7073.19RING-type domain-containing protein n=3 Tax=Monodo... [more]
B7G7T1_PHATC2.330e-6980.00Predicted protein n=4 Tax=Phaeodactylum tricornutu... [more]
A0A7S3PD50_9STRA5.860e-6978.29Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S1UML7_9STRA7.620e-6980.49Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A1Z5J6S6_FISSO1.780e-6894.85RING-box protein 1 n=2 Tax=Fistulifera solaris Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 54..109
e-value: 1.4E-5
score: 34.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 54..110
score: 11.929
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 27..120
e-value: 1.6E-29
score: 103.9
IPR024766Zinc finger, RING-H2-typePFAMPF12678zf-rbx1coord: 52..110
e-value: 8.2E-21
score: 74.0
NoneNo IPR availablePANTHERPTHR11210RING BOXcoord: 29..119
NoneNo IPR availablePANTHERPTHR11210:SF2E3 UBIQUITIN-PROTEIN LIGASE RBX1coord: 29..119
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 32..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig944contigS-firma_M_contig944:15298..16918 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig944.20424.1mRNA_S-firma_M_contig944.20424.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig944 14401..17792 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig944.20424.1 ID=prot_S-firma_M_contig944.20424.1|Name=mRNA_S-firma_M_contig944.20424.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=131bp
MAAETKGQEAQDVEMSESAGKGPEPGIGQVAPRFEIKKWNAVAMWSWDIC
ADTCAICRNSLNEPSIEYQANPSPNNENGLSIAFGCCGHVFHLDCIQRWL
KTRSVCPLCNKEWEFAKIERIPGYGSLQAS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024766Znf_RING_H2
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING