prot_S-firma_M_contig940.20384.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig940.20384.1
Unique Nameprot_S-firma_M_contig940.20384.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length324
Homology
BLAST of mRNA_S-firma_M_contig940.20384.1 vs. uniprot
Match: A0A6H5JFK6_9PHAE (START domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFK6_9PHAE)

HSP 1 Score: 426 bits (1095), Expect = 3.810e-145
Identity = 215/323 (66.56%), Postives = 254/323 (78.64%), Query Frame = 0
Query:    1 MPLSPDVTLEFLQTQFIKCINTSETLAQEMKISDPMSRETKIMCQVPCEDDEFIRIVWGAFKAAGVAWARDFCMLQKACAMTDPSTGERLFCLVSKSVERPEVPDMQKLCKRIRATADVSGLVFREPKDGGPIRITYVVNVNPNGWIPTKLVNFVCNSQAMNVSRVRNKFAETTKALAALKLEPPMASKMVGWRLAHEAPIPRPAPGAAAANASVKFFTSCKVSFRVRGS-GATTDWTPAEAGSSGVGEGAWVTYPAYTAVSMEFKIQPEAAAVAPGESGGDSTGTVVGASGVELEEGKADVVLEWKGAGWFKGFTVYHRVEV 322
            +PL+ DVT E ++TQF+   NTSE LAQ+M+ SDPMSRETKI+ Q+PCE+ E IRI WG+FKAAGVAWARDFC LQ A A TDP+TGERLFC+VS S+ERPEVPDM+KLCKRIR+T   SGLVFREPKDGGP+R TYVVNVNPNGWIP+K+VN +C +QAMNVSRV+NK  ET KALAALK+E P+  K +GWR  HE P+ RPAPG+AA+  SVKF  + KV+FRV G+  ATTDW PAEA S+GVG G  VTYPA T  +M FK++PEAA+     +G    G  VGAS VELEE K+ VVLEWKGAGWF G  +YH VEV
Sbjct:  147 IPLTQDVTFEMVKTQFVDVFNTSEILAQQMRASDPMSRETKILYQIPCEEGELIRISWGSFKAAGVAWARDFCFLQHAAASTDPATGERLFCVVSGSIERPEVPDMEKLCKRIRSTVKTSGLVFREPKDGGPMRATYVVNVNPNGWIPSKIVNIICTNQAMNVSRVKNKLHETAKALAALKIEAPIFPKAIGWRQTHEFPLRRPAPGSAASTVSVKFSATSKVTFRVVGATAATTDWAPAEA-STGVGAGETVTYPADTPTTMTFKLRPEAAS----GNGARRGGGAVGASDVELEEAKSSVVLEWKGAGWFGGLVIYHLVEV 464          
BLAST of mRNA_S-firma_M_contig940.20384.1 vs. uniprot
Match: A0A7S2V7H3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7H3_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 6.000e-19
Identity = 63/196 (32.14%), Postives = 96/196 (48.98%), Query Frame = 0
Query:   15 QFIKCINTSETLAQEMKISDPMSRETKIM-CQVPCEDDE------------------FIRIVWGAFKAAGVAWARDFCMLQKACAMTDPSTGERLFCLVSKSVERPEVPDMQKLCKRIRATADVSGLVFREPKDGGPIRITYVVNVNPNGWIPTKLVNFVCNSQAMNVSRVRNKFAETTKALAALKLEPPMASKMV 191
            + ++ ++TSE LA+EM+I+DPM     I+ C+ P ++ E                   ++I+W  F      W RDFC LQ      DP     +  +V  S+ER EV   +     IR     +G VF+E    G + +TYVV V+  G IP  + N +  SQA+NV+R R++  E  KA   +K+  P+ S  V
Sbjct:   86 EMLRWVDTSEKLAEEMRITDPMCSGALILGCEYPNDNGEGKTEESCIENSESEDCSTILQILWFLFSLPQPLWDRDFCALQVITKCVDPIRNRNMVGVVCGSIERQEVGLPEHT---IRGEIKNTGYVFQESNVPGMLEVTYVVQVDTKGGIPHWVTNRINVSQALNVARTRDRMQEVQKACRIMKVRMPLESAEV 278          
BLAST of mRNA_S-firma_M_contig940.20384.1 vs. uniprot
Match: A0A7S2KYL1_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2KYL1_9DINO)

HSP 1 Score: 69.7 bits (169), Expect = 5.510e-11
Identity = 47/145 (32.41%), Postives = 72/145 (49.66%), Query Frame = 0
Query:   24 ETLAQEMKISDPMSRETKIMCQVPCEDDEFIRIVWGAFKAAGVAWARDFCMLQKACAMTDPSTGERLFCLVSKSVERPEVPDMQKLCKRIRATADVSGLVFREPKDGGPIRITYVVNVNPNGWIPTKLVNFVCNSQAMNVSRVRN 168
            E   + M+ +DPM +  K+M     + D++ R+ WG F A  +   RDF          +   G R    VSKSVE   +P   +   R   +A   G +  E +DG   ++ Y   V+P GW+PT +VN+V + QA NV+R+ N
Sbjct:    1 EHFCKIMQQTDPMFKSGKVM-----KVDQYHRLYWGQFTAFPLC-DRDFVWRS-----LEVQQGTRRIIAVSKSVESDAMPPPGRSVVRGVLSA---GYLVEEAEDGQSCKVVYFCQVDPKGWVPTWIVNWVASDQADNVTRIMN 131          
BLAST of mRNA_S-firma_M_contig940.20384.1 vs. uniprot
Match: UPI00138FA963 (uncharacterized protein LOC116617779 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FA963)

HSP 1 Score: 73.9 bits (180), Expect = 5.530e-11
Identity = 41/115 (35.65%), Postives = 58/115 (50.43%), Query Frame = 0
Query:   53 FIRIVWGAFKAAGVAWARDFCMLQKACAMTDPSTGERLFCLVSKSVERPEVPDMQKLCKRIRATADVSGLVFREPKDGGPIRITYVVNVNPNGWIPTKLVNFVCNSQAMNVSRVR 167
            F  I W      G  W+RD C L+    +TD   G+ +   V  SV RPE P M      +RA    +G VFR   D   + +TYV+  +P GWIPT  V+     +A+N++R+R
Sbjct:  226 FFSIKWAIIGQPGPIWSRDVCWLEYGDIVTDDD-GKEVGFGVGSSVSRPECPPMDHY-HLVRADLMCTGYVFRPSDDADYMEVTYVMQADPKGWIPTWAVSLFAWQEALNLARIR 338          
BLAST of mRNA_S-firma_M_contig940.20384.1 vs. uniprot
Match: A0A2P6MZZ4_9EUKA (START domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MZZ4_9EUKA)

HSP 1 Score: 55.5 bits (132), Expect = 2.510e-5
Identity = 35/107 (32.71%), Postives = 52/107 (48.60%), Query Frame = 0
Query:   69 ARDFCMLQKACAMTDPSTGERLFCLVSKSVERPEVPDMQKLCKRIRATADVSGLVFREPKDGGPIRITYVVNVNPNGWIPTKLVNFVCNSQAMNVSRVRNKFAETTK 175
            ARDFC++    +  DPSTG  LF  VS SVE P VP         RA    +G +      G    +TY+  ++P GW+PT+++N     Q  ++ ++    A   K
Sbjct:  130 ARDFCVI--TVSHYDPSTGCGLF--VSNSVEHPNVPLSPN---HTRAELTDTGYLLVPVNGGTATSVTYLTQMDPKGWLPTRVMNKTAKQQGQSLVKLAKYIASLPK 229          
BLAST of mRNA_S-firma_M_contig940.20384.1 vs. uniprot
Match: A0A6B2LKP8_9EUKA (START domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LKP8_9EUKA)

HSP 1 Score: 54.3 bits (129), Expect = 3.690e-5
Identity = 37/114 (32.46%), Postives = 55/114 (48.25%), Query Frame = 0
Query:   61 FKAAGVAWARDFCMLQKACAMTDPSTGERLFCLVSKSVERPEVPDMQKLCKRIRATADVSGLVFREPKDGGPIRITYVVNVNPNGWIPTKLVNFVCNSQAMNVSRVRNKFAETT 174
            FK+    WARDF +   A    D   G  L   +++SV  PE+P+       +R T D SG +  EP      R+TY++ ++  GWIPT L N V   Q + +  +R     +T
Sbjct:   82 FKSYYTVWARDFTV---AMIRQDLENGSSLC--IAESVVLPELPETSDC---VRGTLDASGFLV-EPLSETECRLTYILQIDLKGWIPTYLSNMVNVYQPLCIIGIRKLLTNST 186          
BLAST of mRNA_S-firma_M_contig940.20384.1 vs. uniprot
Match: A0A0C3CCN2_PILCF (START domain-containing protein n=1 Tax=Piloderma croceum (strain F 1598) TaxID=765440 RepID=A0A0C3CCN2_PILCF)

HSP 1 Score: 54.7 bits (130), Expect = 8.160e-5
Identity = 34/116 (29.31%), Postives = 58/116 (50.00%), Query Frame = 0
Query:   58 WGAFKAAG-VAWARDFCMLQKACAMTDPSTGERLFCLVSKSVERPEVPDMQKLCKRIRATADVSGLVFREPKDGGPIRITYVVNVNPNGWIPTKLVNFVCNSQAMNVSRVRNKFAE 172
            W + K +G + W RDF  +  A  + +    + +   +  SVE   VP+       +R T  V+G + R   +   + +TY+V+V+P G+IP+ LV  V     M ++RVR   A+
Sbjct:  110 WASQKGSGYLVWPRDFTGI--AGHIQEKEGDKEVSYYLQTSVEMKNVPEFPS--SYVRGTLSVAGWILRPAGEANKVDLTYIVHVDPAGYIPSSLVALVVAEIPMCIARVRGYLAD 221          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig940.20384.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JFK6_9PHAE3.810e-14566.56START domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S2V7H3_9STRA6.000e-1932.14Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2KYL1_9DINO5.510e-1132.41Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]
UPI00138FA9635.530e-1135.65uncharacterized protein LOC116617779 n=1 Tax=Nemat... [more]
A0A2P6MZZ4_9EUKA2.510e-532.71START domain-containing protein n=1 Tax=Planoproto... [more]
A0A6B2LKP8_9EUKA3.690e-532.46START domain-containing protein n=1 Tax=Arcella in... [more]
A0A0C3CCN2_PILCF8.160e-529.31START domain-containing protein n=1 Tax=Piloderma ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002913START domainPFAMPF01852STARTcoord: 47..170
e-value: 4.4E-8
score: 32.8
IPR002913START domainPROSITEPS50848STARTcoord: 70..153
score: 11.96
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 8..178
e-value: 4.0E-21
score: 77.7
NoneNo IPR availablePANTHERPTHR19308PHOSPHATIDYLCHOLINE TRANSFER PROTEINcoord: 19..173
NoneNo IPR availablePANTHERPTHR19308:SF14coord: 19..173
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 30..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig940contigS-firma_M_contig940:1667..3941 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig940.20384.1mRNA_S-firma_M_contig940.20384.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig940 193..4983 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig940.20384.1 ID=prot_S-firma_M_contig940.20384.1|Name=mRNA_S-firma_M_contig940.20384.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=324bp
MPLSPDVTLEFLQTQFIKCINTSETLAQEMKISDPMSRETKIMCQVPCED
DEFIRIVWGAFKAAGVAWARDFCMLQKACAMTDPSTGERLFCLVSKSVER
PEVPDMQKLCKRIRATADVSGLVFREPKDGGPIRITYVVNVNPNGWIPTK
LVNFVCNSQAMNVSRVRNKFAETTKALAALKLEPPMASKMVGWRLAHEAP
IPRPAPGAAAANASVKFFTSCKVSFRVRGSGATTDWTPAEAGSSGVGEGA
WVTYPAYTAVSMEFKIQPEAAAVAPGESGGDSTGTVVGASGVELEEGKAD
VVLEWKGAGWFKGFTVYHRVEVN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf
IPR002913START_lipid-bd_dom