prot_S-firma_M_contig9243.20191.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9243.20191.1
Unique Nameprot_S-firma_M_contig9243.20191.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length398
Homology
BLAST of mRNA_S-firma_M_contig9243.20191.1 vs. uniprot
Match: D7FIJ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ8_ECTSI)

HSP 1 Score: 389 bits (998), Expect = 1.520e-123
Identity = 261/399 (65.41%), Postives = 286/399 (71.68%), Query Frame = 0
Query:    1 TASWHKPNEDADEEDPIPPRSDAGPKGRPPKSYATERWDCPPLFRPVRIPSDPP-DSDGVSLGELLAGEYTDALVSSYLVDIEFLLETAPRLKTVPFLLIQGIKEEKQLVINMKAYLTREHPKAVVYLPKTIHIGLHHSKIILLKYKTGLRVVIMTCNLRPDDWGGRCQAAWYQDFPLKPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMEVGEXXXXXXXXXXTQAGGRTRHRGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVVTCEFEEILTDYFEHVGGPAVDWARSLAAYDFTSANVTLIPSVPGRHHGKNLYKYGHMRVRRVLQGEEVHVRPGSHRVTFQIAAIMNLSRRP 398
            T+SWHK +++A    P+    DA  +GR PKSY +ERW CPPLFRPVRIPSDP  ++DGVSLGELL GEYT+ALV+SYLVD EFLL  APRLKTVPFLLIQGIKE+K LV++MKA+L REHP AVVYLPKTIHIGLHHSK+ILLKYKTG+RVVIMTCN+RPDDWGGRCQAAWYQDFP KPP                                XXXXXXXXXXXXX                        GE            AGG          XXXXXXXXXXXXXXXXXXXXXXXXXXXXVV+T EFEEIL DYFEHVGGPA  W RSL+AYDF+SANVTLIPSVPGRH G++LY+YGHMRVR VL  EEVHVRPGSHRV FQ A+IMNLSRRP
Sbjct:  140 TSSWHKVDKNAKVPRPVVSSHDA--RGRRPKSYDSERWSCPPLFRPVRIPSDPASNADGVSLGELLGGEYTEALVASYLVDAEFLLNAAPRLKTVPFLLIQGIKEDKPLVVSMKAFLKREHPAAVVYLPKTIHIGLHHSKMILLKYKTGVRVVIMTCNMRPDDWGGRCQAAWYQDFPFKPPRAKSKGKEKARGKAGKRKRVGADAAPILDEEPXXXXXXXXXXXXX---------------------XXXGESGVAAAD----DAGGAGSXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVITSEFEEILIDYFEHVGGPAAVWGRSLSAYDFSSANVTLIPSVPGRHKGRDLYRYGHMRVRAVLAREEVHVRPGSHRVAFQAASIMNLSRRP 510          
BLAST of mRNA_S-firma_M_contig9243.20191.1 vs. uniprot
Match: A0A6H5KBB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBB1_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 1.500e-32
Identity = 136/262 (51.91%), Postives = 145/262 (55.34%), Query Frame = 0
Query:  140 IILLKYKTGLRVVIMTCNLRPDDWGGRCQAAWYQDFPLKPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMEVGEXXXXXXXXXXTQAGGRTRHRGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVVTCEFE---EILTDYFEHVGGPAVDWARSLAAYDFTSANVTLIPSVPGRHHGKNLYKYGHMRVRRVLQGEEVHVRPGSHRVTFQIAAIMNLSRRP 398
            +ILLKYKTG+RVVIMTCN+RPDDWGGRCQAAWYQ FP KPP                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      X                R R  SD+        XXXXXXX             VV+T EFE   EIL DYFEHVGGPA  W RSL AYDF+SAN TLIPSVPGRH GK+LY                       RV FQ A++MNLS RP
Sbjct:    1 MILLKYKTGVRVVIMTCNMRPDDWGGRCQAAWYQGFPFKPPRAKSKGKEKARGKAGTRKRVGADAAPILDEEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------RKRVASDSEEDYPKEGXXXXXXXHDD----------VVITSEFEVGEEILIDYFEHVGGPAAVWGRSLFAYDFSSANATLIPSVPGRHKGKDLY-----------------------RVAFQAASVMNLSLRP 213          
BLAST of mRNA_S-firma_M_contig9243.20191.1 vs. uniprot
Match: A0A1V9ZNZ3_9STRA (Tyrosyl-DNA phosphodiesterase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZNZ3_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 3.320e-16
Identity = 50/135 (37.04%), Postives = 76/135 (56.30%), Query Frame = 0
Query:   44 FRPVRIPSDPPDSDGVSLGELLAGEYTDALVSSYLVDIEFLLETAPRLKTVPFLLIQGIKEEKQLVINMKAYLTREHPKAVVYLPKTIHIGLHHSKIILLKYKTGLRVVIMTCNLRPDDWGGRCQAAWYQDFPLK 178
            FRP+      P  + +S  ++LAGE+T A++++Y +D E+LL+ + RL+ VP LL  G  +++     MK  + +     V+  P  I  G HH+K+ +L Y   +RV I T N    DW  + Q  WYQDFPLK
Sbjct:  614 FRPM------PHENCISFNDILAGEFTHAILTNYKIDAEWLLKQSTRLEQVPVLLCHGGDQQR-----MKNAIGKRTNITVIAPPLPIPYGTHHTKMTVLFYSQFVRVAIFTANFLAGDWNDKTQGIWYQDFPLK 737          
BLAST of mRNA_S-firma_M_contig9243.20191.1 vs. uniprot
Match: A0A5B6Z499_DAVIN (Putative tyrosyl-DNA phosphodiesterase 1 n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6Z499_DAVIN)

HSP 1 Score: 87.8 bits (216), Expect = 4.050e-15
Identity = 50/144 (34.72%), Postives = 81/144 (56.25%), Query Frame = 0
Query:   39 DCPPLFRPVRIPSDPP--DSDGVSLGELLAGEYTDALVSSYLVDIEFLLETAPRLKTVPFLLIQGIKEEKQLVINMKAYLTREHPKAVVYL--PKTIHIGLHHSKIILLKYKTGLRVVIMTCNLRPDDWGGRCQAAWYQDFPLK 178
            + P  FR +++   P   ++  VS+G+++ G+   A++S+Y+VDI++L+   P LK VP +L+   + + +L     AY+ R  P   +    P  I  G HHSK +LL Y  G+R+++ T NL   DW  + Q  W QDFP K
Sbjct:  186 ELPSTFRLMQVQGLPAWANTSSVSIGDVIQGDVIIAILSNYMVDIDWLISACPTLKKVPHVLVIHGEGDGRL-----AYMKRNKPANWILHKPPLPISYGTHHSKAMLLVYPRGVRIIVHTANLIDVDWNNKSQGLWMQDFPWK 324          
BLAST of mRNA_S-firma_M_contig9243.20191.1 vs. uniprot
Match: A0A2R6W8I3_MARPO (Uncharacterized protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W8I3_MARPO)

HSP 1 Score: 87.4 bits (215), Expect = 6.720e-15
Identity = 47/125 (37.60%), Postives = 73/125 (58.40%), Query Frame = 0
Query:   55 DSDGVSLGELLAGEYTDALVSSYLVDIEFLLETAPRLKTVPFLLIQGIKEEKQLVINMKAYLTREHPKAVVYLPKT-IHIGLHHSKIILLKYKTGLRVVIMTCNLRPDDWGGRCQAAWYQDFPLK 178
            +S  V L +++ G+   A++S+Y+VD++++L   P L+ +P ++I G +     ++N      R+    V+Y P   I  G HHSK +LL Y+TGLRVV+ T NL   DW  + Q  W QDFP K
Sbjct:  233 NSGCVRLQDVIEGDVQVAILSNYMVDVDWILSECPLLRRIPVIMIHGERGGSLDLLN-----NRKSKNWVLYQPPLPISFGTHHSKAMLLLYETGLRVVVHTANLIHADWNNKTQGLWMQDFPRK 352          
BLAST of mRNA_S-firma_M_contig9243.20191.1 vs. uniprot
Match: A0A7N0UD36_KALFE (FHA_2 domain-containing protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0UD36_KALFE)

HSP 1 Score: 86.3 bits (212), Expect = 1.590e-14
Identity = 55/153 (35.95%), Postives = 84/153 (54.90%), Query Frame = 0
Query:   31 KSYATERWDCPPLFRPVRIPSDPP--DSDGVSLGELLAGEYTDALVSSYLVDIEFLLETAPRLKTVPFLL-IQGIKEEKQLVINMKAYLTREHPKAVVYL--PKTIHIGLHHSKIILLKYKTGLRVVIMTCNLRPDDWGGRCQAAWYQDFPLK 178
            +S+   R   P  FR +++   P   ++  VS+G+++ G+   A++S+Y+VDI++L+   P+L  +P +L I G  E      NMK    R+ P   ++   P  I  G HHSK +LL Y  G+RVV+ T NL   DW  + Q  W QDFP K
Sbjct:  181 RSFRVPREKLPLTFRLMKVQGLPAWANASSVSIGDVIEGDVQVAVLSNYMVDIDWLVSACPKLLKIPHVLVIHG--ESDGAFDNMK----RKKPANWIFHKPPLPISFGTHHSKAMLLIYPRGVRVVVHTANLIHVDWNNKSQGLWMQDFPWK 327          
BLAST of mRNA_S-firma_M_contig9243.20191.1 vs. uniprot
Match: A0A6P6W863_COFAR (tyrosyl-DNA phosphodiesterase 1-like isoform X2 n=1 Tax=Coffea arabica TaxID=13443 RepID=A0A6P6W863_COFAR)

HSP 1 Score: 85.9 bits (211), Expect = 1.620e-14
Identity = 53/142 (37.32%), Postives = 80/142 (56.34%), Query Frame = 0
Query:   41 PPLFRPVRIPSDPP--DSDGVSLGELLAGEYTDALVSSYLVDIEFLLETAPRLKTVPFLLIQGIKEEKQLVINMKAYLTREHPKAVVYL--PKTIHIGLHHSKIILLKYKTGLRVVIMTCNLRPDDWGGRCQAAWYQDFPLK 178
            P  FR +R+   P   +++ VS+ +++ G    A++S+Y+VDI++LL   P LK VP +L+  I  E   ++    Y+ R+ P + +    P  I  G HHSK +LL Y  G+RVV+ T NL   DW  + Q  W QDFP K
Sbjct:  190 PSTFRLLRVQGLPAWANTNTVSINDVIQGNVILAILSNYMVDIDWLLSACPLLKKVPNVLV--IHGESDGILE---YMKRKKPASWILHKPPLPISFGTHHSKAMLLVYPQGVRVVVHTANLIHVDWNNKSQGLWMQDFPWK 326          
BLAST of mRNA_S-firma_M_contig9243.20191.1 vs. uniprot
Match: A0A6P6VRB3_COFAR (tyrosyl-DNA phosphodiesterase 1 n=3 Tax=Coffea TaxID=13442 RepID=A0A6P6VRB3_COFAR)

HSP 1 Score: 85.9 bits (211), Expect = 2.070e-14
Identity = 53/142 (37.32%), Postives = 80/142 (56.34%), Query Frame = 0
Query:   41 PPLFRPVRIPSDPP--DSDGVSLGELLAGEYTDALVSSYLVDIEFLLETAPRLKTVPFLLIQGIKEEKQLVINMKAYLTREHPKAVVYL--PKTIHIGLHHSKIILLKYKTGLRVVIMTCNLRPDDWGGRCQAAWYQDFPLK 178
            P  FR +R+   P   +++ VS+ +++ G    A++S+Y+VDI++LL   P LK VP +L+  I  E   ++    Y+ R+ P + +    P  I  G HHSK +LL Y  G+RVV+ T NL   DW  + Q  W QDFP K
Sbjct:  190 PSTFRLLRVQGLPAWANTNTVSINDVIQGNVILAILSNYMVDIDWLLSACPLLKKVPNVLV--IHGESDGILE---YMKRKKPASWILHKPPLPISFGTHHSKAMLLVYPQGVRVVVHTANLIHVDWNNKSQGLWMQDFPWK 326          
BLAST of mRNA_S-firma_M_contig9243.20191.1 vs. uniprot
Match: A0A0K9PTH7_ZOSMR (Putative Tyrosyl-DNA phosphodiesterase n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PTH7_ZOSMR)

HSP 1 Score: 85.5 bits (210), Expect = 2.500e-14
Identity = 47/139 (33.81%), Postives = 82/139 (58.99%), Query Frame = 0
Query:   44 FRPVRIPSDPP--DSDGVSLGELLAGEYTDALVSSYLVDIEFLLETAPRLKTVPFLLIQGIKEEKQLVINMKAYLTREHPKA-VVYLPKT-IHIGLHHSKIILLKYKTGLRVVIMTCNLRPDDWGGRCQAAWYQDFPLK 178
            FR +R+ S PP  ++  VS+G+++ G    A++S+Y+VD+++LL   P LK +P +L+  I  E    +++   + +  P   +++ P+  I  G HHSK ++L Y  G+R+++ T NL   +W  + Q  W QDFP K
Sbjct:  202 FRLMRVQSLPPWANTSSVSIGDVIQGNIQVAILSTYMVDLDWLLSACPALKNIPHVLL--IHGESDAGVDL---MKKNKPANWILHKPQLPISYGTHHSKAMILVYPKGVRIIVHTANLIHSEWNNKSQGLWMQDFPWK 335          
BLAST of mRNA_S-firma_M_contig9243.20191.1 vs. uniprot
Match: A0A022QJS1_ERYGU (Uncharacterized protein (Fragment) n=3 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QJS1_ERYGU)

HSP 1 Score: 85.5 bits (210), Expect = 2.670e-14
Identity = 50/152 (32.89%), Postives = 82/152 (53.95%), Query Frame = 0
Query:   31 KSYATERWDCPPLFRPVRIPSDPP--DSDGVSLGELLAGEYTDALVSSYLVDIEFLLETAPRLKTVPFLLIQGIKEEKQLVINMKAYLTREHPKAVVYL--PKTIHIGLHHSKIILLKYKTGLRVVIMTCNLRPDDWGGRCQAAWYQDFPLK 178
            + +   + + P  FR +R+   P   +++ VS+G+++ G    A++S+Y+VD+++LL   P +K VP +L+   + +  L      Y+ R  P   +    P  I  G HHSK +LL Y  G+RV++ T NL   DW  + Q  W QDFP K
Sbjct:  170 RRFRISKDNLPSTFRLLRVKELPEWANTNAVSIGDVVQGNVLLAVLSNYMVDVDWLLSACPMIKRVPHVLVVHGEGDGTL-----EYMKRNKPSNWILHKPPLPISYGTHHSKAMLLVYPRGVRVIVHTANLIYVDWNNKTQGLWMQDFPWK 316          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9243.20191.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIJ8_ECTSI1.520e-12365.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBB1_9PHAE1.500e-3251.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1V9ZNZ3_9STRA3.320e-1637.04Tyrosyl-DNA phosphodiesterase n=1 Tax=Thraustothec... [more]
A0A5B6Z499_DAVIN4.050e-1534.72Putative tyrosyl-DNA phosphodiesterase 1 n=1 Tax=D... [more]
A0A2R6W8I3_MARPO6.720e-1537.60Uncharacterized protein n=3 Tax=Marchantia polymor... [more]
A0A7N0UD36_KALFE1.590e-1435.95FHA_2 domain-containing protein n=2 Tax=Kalanchoe ... [more]
A0A6P6W863_COFAR1.620e-1437.32tyrosyl-DNA phosphodiesterase 1-like isoform X2 n=... [more]
A0A6P6VRB3_COFAR2.070e-1437.32tyrosyl-DNA phosphodiesterase 1 n=3 Tax=Coffea Tax... [more]
A0A0K9PTH7_ZOSMR2.500e-1433.81Putative Tyrosyl-DNA phosphodiesterase n=1 Tax=Zos... [more]
A0A022QJS1_ERYGU2.670e-1432.89Uncharacterized protein (Fragment) n=3 Tax=Erythra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 273..302
NoneNo IPR availableGENE3D3.30.870.10coord: 44..201
e-value: 1.1E-25
score: 92.1
NoneNo IPR availablePANTHERPTHR12415:SF0TYROSYL-DNA PHOSPHODIESTERASE 1coord: 48..374
NoneNo IPR availableSUPERFAMILY56024Phospholipase D/nucleasecoord: 55..367
IPR027415Tyrosyl-DNA phosphodiesterase, C-terminalGENE3D3.30.870.20coord: 343..398
e-value: 1.5E-6
score: 29.9
IPR010347Tyrosyl-DNA phosphodiesterase IPFAMPF06087Tyr-DNA_phosphocoord: 299..395
e-value: 2.0E-13
score: 50.0
coord: 56..185
e-value: 7.5E-20
score: 71.2
IPR010347Tyrosyl-DNA phosphodiesterase IPANTHERPTHR12415TYROSYL-DNA PHOSPHODIESTERASE 1coord: 48..374

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9243contigS-firma_M_contig9243:938..4076 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9243.20191.1mRNA_S-firma_M_contig9243.20191.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9243 938..4076 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9243.20191.1 ID=prot_S-firma_M_contig9243.20191.1|Name=mRNA_S-firma_M_contig9243.20191.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=398bp
TASWHKPNEDADEEDPIPPRSDAGPKGRPPKSYATERWDCPPLFRPVRIP
SDPPDSDGVSLGELLAGEYTDALVSSYLVDIEFLLETAPRLKTVPFLLIQ
GIKEEKQLVINMKAYLTREHPKAVVYLPKTIHIGLHHSKIILLKYKTGLR
VVIMTCNLRPDDWGGRCQAAWYQDFPLKPPPPEKAKGKGKGKGKQKQKQK
RKRGADEPEEPEEDEGEEEEEEEGGAGGGAKKKRRRVGDGDGGGDAMEVG
EEGEGEGGGEGTQAGGRTRHRGGSDAAEEEEKEEEKEEEKEEEKEKEDDD
DDDEVVVTCEFEEILTDYFEHVGGPAVDWARSLAAYDFTSANVTLIPSVP
GRHHGKNLYKYGHMRVRRVLQGEEVHVRPGSHRVTFQIAAIMNLSRRP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010347Tdp1
IPR027415TDP_C