prot_S-firma_M_contig9154.20095.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9154.20095.1
Unique Nameprot_S-firma_M_contig9154.20095.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length439
Homology
BLAST of mRNA_S-firma_M_contig9154.20095.1 vs. uniprot
Match: A0A6H5JGI2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JGI2_9PHAE)

HSP 1 Score: 383 bits (984), Expect = 2.520e-119
Identity = 288/500 (57.60%), Postives = 323/500 (64.60%), Query Frame = 0
Query:    4 QVKERFPRQAAQAARLTAVEEQLDQRINKVRRRLLYKLEQQEWPSKSLRAWLSLEVISAPRPGQLRRSPXXXXXXXXXXXXXXXXXXXRR------EGSAAQGVG--------------GALAAEDGGVENGGRSPAPEGXXXXXXXXXXXXXXXXXXXXXXX-----EG--VKLDWFVLARLEGTLVGAPADGVERRFTSFFSRVMLELDEKAFPDVATVEWVRSAGCEELHCVELRLPLAGCLSRGLKEISVKAALVPRLDNDRPRRFV-----------------LAAPLRQALGLAERVDTKAVLVAAVFEALRRKGLLPGGXXXXXXXXXXXXXXXXXXRGPAGGI-------------MLTCDPPLAMVLGASAFPFSQLEEALSPHVDPAPPPSVIAVVSLEKGSREEKFFDVKVDTETPFQLQAAKSLIG-----GVAGGAENKKEKENMGGVARXXXXXXXXQK--QGVTRALGVLTMAEREAEAQLGRQV 439
            +VK+RFPRQA QAARLT VEEQLD+RIN+VRR+LLYKLEQ EWPSK LR WLSLEV SAP+PGQ  R P   XXXX            RR       G   +G                GA  A  G  +      AP+ XXXXXXXXXXXXXXXXX           +G  V+L+WFVLARL+G+LVGAPADGVERRFTSFFS V LELD KAFPDVA VEWVRSA CEELHCVELRLPLAGCLSRGLKEISVKA L  R+D DRPRRFV                 ++APLRQ L L +RVDTK VL+AAV+EALR KG LPGG   XXXXXXXXXXXXXXX                    ML CDP LA VLGAS+FPFSQLEEAL PHV+PA  PS++A VSLEKG+  E   DV VDTETPFQL+AA+SL+G     G  G AE    +     V +         +  +G TRALGV T+ EREAE Q+GRQ+
Sbjct:  184 EVKKRFPRQADQAARLTEVEEQLDKRINRVRRKLLYKLEQLEWPSKCLRTWLSLEVTSAPKPGQRGRQPPQQXXXXSRPGAESGKQGNRRGKMPATSGKGTEGTPPSXXXXXXXXXXXVGARRAGAGTEQEAASVAAPKXXXXXXXXXXXXXXXXXXDDGMKAVDAGGDGGDVELEWFVLARLQGSLVGAPADGVERRFTSFFSSVALELDGKAFPDVAAVEWVRSARCEELHCVELRLPLAGCLSRGLKEISVKAVLAARVDEDRPRRFVPPKSCPVRTARHLVPFVVSAPLRQVLRLTKRVDTKPVLMAAVYEALRLKGALPGGTRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMLHCDPELARVLGASSFPFSQLEEALGPHVEPAESPSLVATVSLEKGNAVETCADVTVDTETPFQLRAAQSLLGSDGGRGAGGSAEGAPRQNGALAVEQRAGLGGGPAEGGRGHTRALGVPTVEEREAELQIGRQI 683          
BLAST of mRNA_S-firma_M_contig9154.20095.1 vs. uniprot
Match: A0A067FKG9_CITSI (SWIB/MDM2 domain-containing protein n=3 Tax=Citrus TaxID=2706 RepID=A0A067FKG9_CITSI)

HSP 1 Score: 66.6 bits (161), Expect = 4.020e-8
Identity = 55/210 (26.19%), Postives = 90/210 (42.86%), Query Frame = 0
Query:  174 RFTSFFSRVMLELDEKAFPDVATVEWVRSAGCEELHCVELRLPLAGCLSRGLKEISVKAALVPRLDNDRPRRFVLAAPLRQALGLAERVDTKAVLVAAVFEALRRKGLLPGGXXXXXXXXXXXXXXXXXXRGPAGGIMLTCDPPLAMVLGASAFPFSQLEEALSPHVDPAPPPSVIAVVSLEKGSRE-EKFFDVKVDTETPFQLQAAKSL 382
            +F+SFF RV + LD++ +PD   + W  S         E++        +G KE +V   L     N  P +F L+ PL + LG+   VDT+  ++AA++  ++ + L                      + P    + TCDPPL  V G     F+ + + +S H+ P  P  +   + L   S      +DV VD   P Q + +  L
Sbjct:  268 KFSSFFKRVTISLDQRLYPDNHIIVWENSRSPAPHEGFEVK-------RKGDKEFTVNIRLEM---NYVPEKFKLSPPLMEVLGIE--VDTRPRIIAAIWHYVKARKL----------------------QHPNDPSIFTCDPPLQKVFGEEKMKFTMVSQKISQHLSPPQPIHLEHKIKLSGNSPVGTACYDVLVDVPFPIQRELSTLL 443          
BLAST of mRNA_S-firma_M_contig9154.20095.1 vs. uniprot
Match: A0A6P4B5R9_ZIZJJ (SWI/SNF complex component SNF12 homolog n=2 Tax=Rhamnaceae TaxID=3608 RepID=A0A6P4B5R9_ZIZJJ)

HSP 1 Score: 63.9 bits (154), Expect = 2.890e-7
Identity = 57/221 (25.79%), Postives = 96/221 (43.44%), Query Frame = 0
Query:  174 RFTSFFSRVMLELDEKAFPDVATVEWVRSAGCEELHCVELRLPLAGCLSRGLKEISVKAALVPRLDNDRPRRFVLAAPLRQALGLAERVDTKAVLVAAVFEALRRKGLLPGGXXXXXXXXXXXXXXXXXXRGPAGGIMLTCDPPLAMVLGASAFPFSQLEEALSPHVDPAPPPSVIAVVSLEKGSRE-EKFFDVKVDTETPFQLQAAKSLIGGVAGGAENK 393
            +F+SFF RV + LD++ +PD   + W  +         E++        +G KE +V   L     N  P +F L+ PL + LG+   VDT+  ++AA+++ ++ + L                      + P       CDPPL  V G     F+ + + +S H+ P  P  +   + L   S      +DV VD   PF +Q   S++  +A   +NK
Sbjct:  265 KFSSFFKRVTISLDQRLYPDNHIIMWENARSPAPHEGFEVK-------RKGDKEFTVNIRLEM---NYMPEKFKLSQPLMEVLGIE--VDTRPRIIAAIWQYVKARKL----------------------QNPNDPSFFYCDPPLQKVFGEDRMKFTMVSQKISQHLFPPQPIHLEHKIKLSGNSPVGTACYDVLVDV--PFPIQRELSVL--LANSEKNK 447          
BLAST of mRNA_S-firma_M_contig9154.20095.1 vs. uniprot
Match: A0A803KWT7_CHEQI (SWIB/MDM2 domain-containing protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803KWT7_CHEQI)

HSP 1 Score: 62.8 bits (151), Expect = 7.790e-7
Identity = 52/212 (24.53%), Postives = 90/212 (42.45%), Query Frame = 0
Query:  174 RFTSFFSRVMLELDEKAFPDVATVEWVRSAGCEELHCVELRLPLAGCLSRGLKEISVKAALVPRLD-NDRPRRFVLAAPLRQALGLAERVDTKAVLVAAVFEALRRKGLLPGGXXXXXXXXXXXXXXXXXXRGPAGGIMLTCDPPLAMVLGASAFPFSQLEEALSPHVDPAPPPSVIAVVSLEKGSRE-EKFFDVKVDTETPFQLQAAKSLI 383
            +F++FF RV + LD++ +P+  ++ W  S         E++        +G KE  V      R D N  P +F L+ PL + LG+    +T+  ++AA++  ++ + L                      + P       CDP L  V G     F+ + + +S H+ P PP  V   + L   S      +D+ VD   PF +Q   S++
Sbjct:  225 KFSNFFKRVTIALDQRLYPENHSIVWENSRASAPTEGFEVK-------RKGDKEFMVNI----RFDMNYMPEKFKLSPPLTELLGIE--AETRPRIIAAIWHYVKARKL----------------------QNPNDPTFFNCDPQLQKVFGEEKMKFTMVSQKISQHLTPPPPIQVDHQIKLSGNSPAGNACYDILVDI--PFPIQRELSML 399          
BLAST of mRNA_S-firma_M_contig9154.20095.1 vs. uniprot
Match: A0A0K9RT03_SPIOL (SWIB/MDM2 domain-containing protein n=3 Tax=Chenopodioideae TaxID=1307796 RepID=A0A0K9RT03_SPIOL)

HSP 1 Score: 62.0 bits (149), Expect = 1.210e-6
Identity = 53/212 (25.00%), Postives = 91/212 (42.92%), Query Frame = 0
Query:  174 RFTSFFSRVMLELDEKAFPDVATVEWVRSAGCEELHCVELRLPLAGCLSRGLKEISVKAALVPRLD-NDRPRRFVLAAPLRQALGLAERVDTKAVLVAAVFEALRRKGLLPGGXXXXXXXXXXXXXXXXXXRGPAGGIMLTCDPPLAMVLGASAFPFSQLEEALSPHVDPAPPPSVIAVVSLEKGSRE-EKFFDVKVDTETPFQLQAAKSLI 383
            +F++FF RV + LD++ +P+   + W  S         E++        +G KE +V      R D N  P +F L+ PL + LG+    +T+  ++AA++  ++ + L                      + P    +  CDP L  V G     F+ + + +S H+ P PP  V   + L   S      +DV VD   PF +Q   S++
Sbjct:  283 KFSNFFKRVTIALDQRLYPENHLIVWENSRSSAPTEGFEVK-------RKGDKEFTVNI----RFDMNYLPEKFKLSPPLTELLGIE--AETRPRIIAAIWHYVKARKL----------------------QNPNDPSLFNCDPQLQKVFGEEKMKFTMVSQKISQHLTPPPPIQVEHPIKLSGISPSGNACYDVLVDI--PFPIQRELSML 457          
BLAST of mRNA_S-firma_M_contig9154.20095.1 vs. uniprot
Match: W9SAK8_9ROSA (SWI/SNF complex component SNF12-like protein n=4 Tax=Rosales TaxID=3744 RepID=W9SAK8_9ROSA)

HSP 1 Score: 62.0 bits (149), Expect = 1.240e-6
Identity = 55/211 (26.07%), Postives = 90/211 (42.65%), Query Frame = 0
Query:  174 RFTSFFSRVMLELDEKAFPDVATVEWVRSAGCEELHCVELRLPLAGCLSRGLKEISVKAALVPRLDNDRPRRFVLAAPLRQALGLAERVDTKAVLVAAVFEALRRKGLLPGGXXXXXXXXXXXXXXXXXXRGPAGGIMLTCDPPLAMVLGASAFPFSQLEEALSPHVDPAPPPSVIAVVSLEKGSRE-EKFFDVKVDTETPFQLQAAKSLI 383
            +F+SFF RV + LD++ +PD   + W  +         E+R        +G KE +V   L     N  P +F L+ PL   LG+   VDT+  ++AA+++ ++ + L                      + P       CDPPL  V G     F+ + + +S H+ P  P  +   + L   S      +DV VD   PF +Q   S++
Sbjct:  266 KFSSFFKRVTISLDQRLYPDNHIIIWENARTPAPHEGFEVR-------RKGDKEFTVNIRLEM---NYVPEKFKLSQPLVDVLGIE--VDTRPRIIAAIWQYVKARKL----------------------QNPHDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLFPPQPIHLEHKIKLSGNSPVGTACYDVLVDV--PFPIQRELSVL 440          
BLAST of mRNA_S-firma_M_contig9154.20095.1 vs. uniprot
Match: A0A6I9RIF1_ELAGV (SWI/SNF complex component SNF12 homolog n=1 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6I9RIF1_ELAGV)

HSP 1 Score: 61.2 bits (147), Expect = 1.900e-6
Identity = 44/175 (25.14%), Postives = 77/175 (44.00%), Query Frame = 0
Query:  171 VERRFTSFFSRVMLELDEKAFPDVATVEWVRSAGCEELHCVELRLPLAGCLSRGLKEISVKAALVPRLDNDRPRRFVLAAPLRQALGLAERVDTKAVLVAAVFEALRRKGLLPGGXXXXXXXXXXXXXXXXXXRGPAGGIMLTCDPPLAMVLGASAFPFSQLEEALSPHVDPAPP 345
            ++ +F++FF RV+++LDE  +PD   + W  S     +   E++        +G KE + +  L     ND P  F L+  L++ LG+    +T+A ++A +F  ++RK L                      R  +      CD PL  V G +   F+ +   +S H+   PP
Sbjct:  180 LDPKFSTFFKRVVVQLDEHLYPDDPVIVWESSRSAAPVEGFEIK-------RKGDKEFTARILLEM---NDMPEEFRLSPALKKVLGIE--FNTRAAIIARLFNYVKRKRL----------------------RNRSDPTEFVCDAPLKRVFGKNIMKFAAMSMKISQHLSDMPP 320          
BLAST of mRNA_S-firma_M_contig9154.20095.1 vs. uniprot
Match: UPI001CB919A4 (SWI/SNF complex component SNF12 homolog n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB919A4)

HSP 1 Score: 60.8 bits (146), Expect = 2.600e-6
Identity = 46/172 (26.74%), Postives = 76/172 (44.19%), Query Frame = 0
Query:  174 RFTSFFSRVMLELDEKAFPDVATVEWVRSAGCEELHCVELRLPLAGCLSRGLKEISVKAALVPRLDNDRPRRFVLAAPLRQALGLAERVDTKAVLVAAVFEALRRKGLLPGGXXXXXXXXXXXXXXXXXXRGPAGGIMLTCDPPLAMVLGASAFPFSQLEEALSPHVDPAPP 345
            +F+SFF RV + LD++ +PD   + W  S         E++        +G KE +V   +     N  P +F ++APL + LG+   VDT+A ++AA+++ ++ + L                                CDPPL  V G     FS + + +S H+ P PP
Sbjct:  228 KFSSFFKRVTIGLDQRLYPDNHMIVWDSSRMPTPHEGFEVK-------RKGDKEFNVNIRMEM---NYLPEKFRVSAPLMEVLGVE--VDTRARVIAAIWQYVKARKLQDSDDPSY----------------------FKCDPPLQKVFGEEKIKFSMVSQKISNHLSPPPP 365          
BLAST of mRNA_S-firma_M_contig9154.20095.1 vs. uniprot
Match: A0A251SN16_HELAN (Putative SWIB/MDM2 domain-containing protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251SN16_HELAN)

HSP 1 Score: 60.8 bits (146), Expect = 2.640e-6
Identity = 59/225 (26.22%), Postives = 92/225 (40.89%), Query Frame = 0
Query:  174 RFTSFFSRVMLELDEKAFPDVATVEWVRSAGCEELHCVELRLPLAGCLSRGLKEISVKAALVPRLDNDRPRRFVLAAPLRQALGLAERVDTKAVLVAAVFEALRRKGLLPGGXXXXXXXXXXXXXXXXXXRGPAGGIMLTCDPPLAMVLGASAFPFSQLEEALSPHVDPAPPPSVIAVVSLEKGSRE-EKFFDVKVDTETPFQLQAAKSLIGGVAGGAENKKEKE 397
            +F+SFF RV ++LD+K +PD  T+ W  S         E++        +G KE +V   L     N  P +F L++ L + LG+   VDT+  +++A+++ ++ + L                                CDPPL  V G     FS +   +S H+ P PP  +   + L   S      +DV VD     Q      L       A N+K KE
Sbjct:  240 KFSSFFKRVGIQLDQKLYPDNHTILWDSSRTPTPHEGFEVK-------RKGDKEFTVNIRLEM---NYLPEKFKLSSSLMEVLGIE--VDTRTRVISAIWQYVKARKLQDADDPSY----------------------FNCDPPLLKVFGEEKVKFSMVSHKISSHLSPPPPIHLEHKMKLSGNSPAGNACYDVLVDVPLLVQKDLNALL-------ANNEKTKE 423          
BLAST of mRNA_S-firma_M_contig9154.20095.1 vs. uniprot
Match: A0A2K1X4B8_POPTR (SWIB/MDM2 domain-containing protein n=6 Tax=Populus TaxID=3689 RepID=A0A2K1X4B8_POPTR)

HSP 1 Score: 60.8 bits (146), Expect = 2.770e-6
Identity = 51/205 (24.88%), Postives = 87/205 (42.44%), Query Frame = 0
Query:  174 RFTSFFSRVMLELDEKAFPDVATVEWVRSAGCEELHCVELRLPLAGCLSRGLKEISVKAALVPRLDNDRPRRFVLAAPLRQALGLAERVDTKAVLVAAVFEALRRKGLLPGGXXXXXXXXXXXXXXXXXXRGPAGGIMLTCDPPLAMVLGASAFPFSQLEEALSPHVDPAPPPSVIAVVSLEKGSREEKF-FDVKVDTETPFQLQ 377
            +F+SFF RV ++LD++ +PD   + W  +         E++        +G KE +V   L     N  P +F L+  L + LG+   V+T+  ++AA++  ++ + L                      + P       CD PL  V G S   F+ + + +SPH+ P  P  +   + L   S      +DV VD   P Q +
Sbjct:  270 KFSSFFKRVTIQLDQRLYPDNHIIIWEHARSPAPHEGFEVK-------RKGDKEFTVNIRLEM---NYVPEKFKLSPALMEVLGIE--VETRPRIIAAIWHYVKARKL----------------------QNPDDPSFFICDAPLQKVFGESKMKFTMVSQRISPHLSPPQPIHLEHKIKLSGNSPAGTVCYDVLVDVPFPIQRE 440          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9154.20095.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGI2_9PHAE2.520e-11957.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A067FKG9_CITSI4.020e-826.19SWIB/MDM2 domain-containing protein n=3 Tax=Citrus... [more]
A0A6P4B5R9_ZIZJJ2.890e-725.79SWI/SNF complex component SNF12 homolog n=2 Tax=Rh... [more]
A0A803KWT7_CHEQI7.790e-724.53SWIB/MDM2 domain-containing protein n=1 Tax=Chenop... [more]
A0A0K9RT03_SPIOL1.210e-625.00SWIB/MDM2 domain-containing protein n=3 Tax=Chenop... [more]
W9SAK8_9ROSA1.240e-626.07SWI/SNF complex component SNF12-like protein n=4 T... [more]
A0A6I9RIF1_ELAGV1.900e-625.14SWI/SNF complex component SNF12 homolog n=1 Tax=El... [more]
UPI001CB919A42.600e-626.74SWI/SNF complex component SNF12 homolog n=1 Tax=Er... [more]
A0A251SN16_HELAN2.640e-626.22Putative SWIB/MDM2 domain-containing protein n=1 T... [more]
A0A2K1X4B8_POPTR2.770e-624.88SWIB/MDM2 domain-containing protein n=6 Tax=Populu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 16..36
NoneNo IPR availablePANTHERPTHR13844BRG-1 ASSOCIATED FACTOR 60 BAF60coord: 5..383
NoneNo IPR availablePANTHERPTHR13844:SF7BRAHMA-ASSOCIATED PROTEIN OF 60 KDAcoord: 5..383

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9154contigS-firma_M_contig9154:309..3805 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9154.20095.1mRNA_S-firma_M_contig9154.20095.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9154 309..3805 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9154.20095.1 ID=prot_S-firma_M_contig9154.20095.1|Name=mRNA_S-firma_M_contig9154.20095.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=439bp
LCRQVKERFPRQAAQAARLTAVEEQLDQRINKVRRRLLYKLEQQEWPSKS
LRAWLSLEVISAPRPGQLRRSPPPPPQQQQQQQQQQGNRKGRREGSAAQG
VGGALAAEDGGVENGGRSPAPEGGRKEGGVAAGVSDSRSAEQEGEQEGVK
LDWFVLARLEGTLVGAPADGVERRFTSFFSRVMLELDEKAFPDVATVEWV
RSAGCEELHCVELRLPLAGCLSRGLKEISVKAALVPRLDNDRPRRFVLAA
PLRQALGLAERVDTKAVLVAAVFEALRRKGLLPGGGGGEGEGGAAAAAAA
AAARGPAGGIMLTCDPPLAMVLGASAFPFSQLEEALSPHVDPAPPPSVIA
VVSLEKGSREEKFFDVKVDTETPFQLQAAKSLIGGVAGGAENKKEKENMG
GVARQQQQQQQKQKQGVTRALGVLTMAEREAEAQLGRQV
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