prot_S-firma_M_contig910.20047.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig910.20047.1
Unique Nameprot_S-firma_M_contig910.20047.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length872
Homology
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BLAST of mRNA_S-firma_M_contig910.20047.1 vs. uniprot
Match: D7G285_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G285_ECTSI)

HSP 1 Score: 179 bits (454), Expect = 3.530e-43
Identity = 166/361 (45.98%), Postives = 200/361 (55.40%), Query Frame = 0 
Query:    1 MVDPAMEQPANGGQPLPFP----GQQRGGGRANGXXXXXXXXXXXXXXXXXXEQRTMSLNQSVAEVAGDLEGMVHTWDKTRSAVDTSVDENLRALSYSVAKSRILGRIVDMDAKIVDDPHGDRKGTDTTRPNRRRGGHRTRST-----------PPXXXXXXXXXXXXXXXXXXXXXXXXXXXDGPAAARAGFSCREDGEGALGVTGFDLRAALENGDIVEVKEHLRSLHHLAAQQELMLEELNSEGMRAIDLNHRLSLKLLDKSKELEVLRQAYFLAIEADPAPPASTG-----GAAKPAXXXXXSSVAS---------PALEPVSSGMTPPPLPRPPLSDSAAAVRREHSRAYSGVGIV 332
            MV+PAM+Q  +   PLPFP         G  A+G                      M +NQ+VA VAGDLEG+VH WDKTR A+D +VDE+LR ++YSVA++R+   + D   +IVDD     K + + R + R    RTRST           PP      XXXXXXXXXXXXXXXXXXX   G  A        E+ E  L VTGFDLRAAL++  I E +  LR L+ LAAQQELML+E+  EGM AI+LN +LSLKL DK KE+EVL++AYFLAIE DPA    T      GAAK       S  A          P LE VSSGMTP               RREHSRA+SG+GI 
Sbjct:    1 MVNPAMDQ--SNQPPLPFPPXXXXXHTNGHHASGPSSSAITNGDAGLR--------MGVNQTVATVAGDLEGLVHAWDKTRGAMDFTVDESLRTVAYSVAENRVHTDLRDRGIEIVDDSRA--KESKSWRHSDR---SRTRSTSSXXXXXXXXXPPPSSLSRXXXXXXXXXXXXXXXXXXXFSGGEIARH-----EEEDEDGLQVTGFDLRAALKSESISETRRFLRVLYDLAAQQELMLDEMAREGMYAIELNDKLSLKLADKRKEVEVLKKAYFLAIETDPAAAWDTSDNNNNGAAKITAATTDSPGAGAAESLPGAEPTLEAVSSGMTPXXXXXXXXXXXXXXXRREHSRAFSGMGIA 341
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig910.20047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G285_ECTSI3.530e-4345.98Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 211..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig910contigS-firma_M_contig910:17346..22807 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig910.20047.1mRNA_S-firma_M_contig910.20047.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig910 16733..22991 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig910.20047.1 ID=prot_S-firma_M_contig910.20047.1|Name=mRNA_S-firma_M_contig910.20047.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=872bp
MVDPAMEQPANGGQPLPFPGQQRGGGRANGHHVSSSTSTAATVTNGGGEQ
RTMSLNQSVAEVAGDLEGMVHTWDKTRSAVDTSVDENLRALSYSVAKSRI
LGRIVDMDAKIVDDPHGDRKGTDTTRPNRRRGGHRTRSTPPPPPPRSAAS
YSRSRSPSPSSSSAAATADGPAAARAGFSCREDGEGALGVTGFDLRAALE
NGDIVEVKEHLRSLHHLAAQQELMLEELNSEGMRAIDLNHRLSLKLLDKS
KELEVLRQAYFLAIEADPAPPASTGGAAKPAATGAASSVASPALEPVSSG
MTPPPLPRPPLSDSAAAVRREHSRAYSGVGIVGGGGWGKGAPTAGNAEAG
VTNGALKGGGRRQEEARAGRGHGHGRTRSGSGSSVGSNVSVRTELFPRAE
ETGPGQEMSPRANDEGRAPTQPRQQGPPVATLFPTPSPPVDATTSAEDGG
RPAVDGGGAISATDNNAGAFGGAVTPAAGSAATTPRSHPSPERGLSAPPM
MGGQDAEGSGTLEAVSAAGSAATTPRKHPFQGQLADGGQGSSAPPMMSAP
PMMSAPPMMSGPPTGAAGWMTGGGVSGSNAGGAFGKPDDGVGVSEDPLQA
MMMPPAPQQQQQLHQWLPAAAAANREAAQTDGAAANGNNNAAGAPPLGPP
PALPHPGQPMSYRAVRKTPAGAGGAGFGGPRPKAFGGGGMGPFGGGMARP
FGGVGSSNNSQDGGDSEGGSGGGGGSELADAAVSVAATGGGDWGATASST
TVGERSGTSYSSVGSFNGSFGSGRGGGGGASVDAGAAPEVAAQQPPPQAG
GGNDYGGGDGGGGNAGGEVSGGGAFEGNGGDAATAGYPEGEEGNGCGGGV
GGFSSSAWPAESEPSAFFGGV*
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