prot_S-firma_M_contig9061.20001.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9061.20001.1
Unique Nameprot_S-firma_M_contig9061.20001.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length326
Homology
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BLAST of mRNA_S-firma_M_contig9061.20001.1 vs. uniprot
Match: A0A6H5KNU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU8_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 1.420e-53
Identity = 166/332 (50.00%), Postives = 198/332 (59.64%), Query Frame = 0 
Query:    1 MWKRTKEKPAAPASARDASPTAAGGVDDDAALFSHPGAYGAMMLPPKAVKAGFFXXXXXXXXXXXSNNHRADAVADTKTPSTQQHQHKQHPLCSGDPARIDGLVAEAREAKEAEVALRAEGARLRSKQAEAEKDIQRLRREKEHMTEAHLAQLERLRRDLATDAREGQRRLRSELDKGHAKSMDKLRLSLAEETDFLVAETKRLREDLQRSRQSRAXXXXXXXXXXXXXXXXRAEGGRAPRPAGAKHAA---AGETP---VPLLSAGFWNSLTNAFTPGDFLDMMGSSXXXXXXXXXXXXXXXXXXXXXXXXVLAAVPLFCFYRRWRVQRWV 326
            MWKR+K+                    +  A+FSHPGAYGAMMLP         XXXXXXXXXXX                        HPLCSG+P +IDGLV+EAREAKEAE ALRAE A LR ++A  + DI+RL R+K  +TE HLAQ+ERLRRDL  DAR+G+RRL SEL+KGHAKSMD+LRL+L  E + L  ETKRLREDLQR+R++++  XXXXXXXXXX          +PR  G K +A   A +TP   VP L AGFWNSLT+AFTP D LD +                           VLAAVPLFCF +R R+QR V
Sbjct:    2 MWKRSKKXXXXXXDQXXXXXXXXXXXAEGGAMFSHPGAYGAMMLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-HPLCSGEPGKIDGLVSEAREAKEAEGALRAEAAILRERKAVLDADIRRLERDKADLTEEHLAQMERLRRDLQEDARDGKRRLESELEKGHAKSMDRLRLTLKAEAESLAGETKRLREDLQRAREAKSAAXXXXXXXXXX----------SPRTKGGKSSARSIARDTPPAAVPALPAGFWNSLTSAFTPRDLLDGVAVGVGDGGNGAVPPPALL---------VLAAVPLFCFIKRRRIQRLV 313
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BLAST of mRNA_S-firma_M_contig9061.20001.1 vs. uniprot
Match: D7G1T9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T9_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 1.180e-28
Identity = 95/177 (53.67%), Postives = 117/177 (66.10%), Query Frame = 0 
Query:  153 LERLRRDLATDAREGQRRLRSELDKGHAKSMDKLRLSLAEETDFLVAETKRLREDLQRSRQSRAXXXXXXXXXXXXXXXXRAEGGRAPRPAGAKHAAAGETP---VPLLSAGFWNSLTNAFTPGDFLDMMGSSXXXXXXXXXXXXXXXXXXXXXXXXVLAAVPLFCFYRRWRVQRWV 326
            +ERLRRDL  DAR+G+RRL SEL+KGHAKSMD+LRL+L  E + L  ETKRLREDLQR+R++++ XXXXXXXXXXX    RA+GG++     +  + A +TP   VP L AGFWNSLT+AFTP D LD +                           VLAAVPLFCF +RWR+QR V
Sbjct:    1 MERLRRDLQEDARDGKRRLESELEKGHAKSMDRLRLTLKAEAESLAGETKRLREDLQRAREAKSAXXXXXXXXXXXP---RAKGGKS-----SARSIARDTPAAAVPALPAGFWNSLTSAFTPRDLLDGVAVGVGDGGNGAVPPPALL---------VLAAVPLFCFLKRWRIQRLV 160
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9061.20001.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNU8_9PHAE1.420e-5350.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1T9_ECTSI1.180e-2853.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 100..148
NoneNo IPR availableCOILSCoilCoilcoord: 150..170
NoneNo IPR availableTMHMMTMhelixcoord: 295..317

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9061contigS-firma_M_contig9061:1425..2402 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9061.20001.1mRNA_S-firma_M_contig9061.20001.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9061 1181..2402 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9061.20001.1 ID=prot_S-firma_M_contig9061.20001.1|Name=mRNA_S-firma_M_contig9061.20001.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=326bp
MWKRTKEKPAAPASARDASPTAAGGVDDDAALFSHPGAYGAMMLPPKAVK
AGFFAGRRRRREEPKSNNHRADAVADTKTPSTQQHQHKQHPLCSGDPARI
DGLVAEAREAKEAEVALRAEGARLRSKQAEAEKDIQRLRREKEHMTEAHL
AQLERLRRDLATDAREGQRRLRSELDKGHAKSMDKLRLSLAEETDFLVAE
TKRLREDLQRSRQSRAANAAAAAPAAAAASAARAEGGRAPRPAGAKHAAA
GETPVPLLSAGFWNSLTNAFTPGDFLDMMGSSSNGGAGVAAAGGAGAASV
PPPALLVLAAVPLFCFYRRWRVQRWV
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