prot_S-firma_M_contig8935.19838.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-firma_M_contig8935.19838.1
Unique Name	prot_S-firma_M_contig8935.19838.1
Type	polypeptide
Organism	Sphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length	88

Homology

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BLAST of mRNA_S-firma_M_contig8935.19838.1 vs. uniprot
Match: A0A6H5KMX5_9PHAE (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMX5_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 2.400e-52
Identity = 83/87 (95.40%), Postives = 87/87 (100.00%), Query Frame = 0

Query:    1 QVLKTYKTDRPVNAAVMHPTKEHVILGGGQDAMSVTTTSSSVGKFESRFFHMIYESEFGRVKGHFGPINALAINPNGLSYASGAEDG 87
            QVLKTYKTDRPVNA+VMHPTKEHVILGGGQDAMSVTTTSS+VGKFESRFFHMIYE+EFGRVKGHFGPINALAINPNGLSYASG+EDG
Sbjct:  224 QVLKTYKTDRPVNASVMHPTKEHVILGGGQDAMSVTTTSSNVGKFESRFFHMIYETEFGRVKGHFGPINALAINPNGLSYASGSEDG 310

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BLAST of mRNA_S-firma_M_contig8935.19838.1 vs. uniprot
Match: A0A835ZF13_9STRA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF13_9STRA)

HSP 1 Score: 158 bits (400), Expect = 9.880e-46
Identity = 72/87 (82.76%), Postives = 81/87 (93.10%), Query Frame = 0

Query:    1 QVLKTYKTDRPVNAAVMHPTKEHVILGGGQDAMSVTTTSSSVGKFESRFFHMIYESEFGRVKGHFGPINALAINPNGLSYASGAEDG 87
            +VLK Y T+RPVNAAV+HPTK+H++LGGGQDAMSVTTT S VGKFE+RF+HMIYE EFGRVKGHFGPINALAINP+GLSY SGAEDG
Sbjct:  224 EVLKVYPTERPVNAAVIHPTKDHILLGGGQDAMSVTTTGSRVGKFETRFYHMIYEEEFGRVKGHFGPINALAINPDGLSYCSGAEDG 310

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BLAST of mRNA_S-firma_M_contig8935.19838.1 vs. uniprot
Match: A0A7S2RQ21_9STRA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RQ21_9STRA)

HSP 1 Score: 156 bits (395), Expect = 6.200e-45
Identity = 72/85 (84.71%), Postives = 79/85 (92.94%), Query Frame = 0

Query:    3 LKTYKTDRPVNAAVMHPTKEHVILGGGQDAMSVTTTSSSVGKFESRFFHMIYESEFGRVKGHFGPINALAINPNGLSYASGAEDG 87
            LKTYKTDRP+N AV+  TK+H+ILGGGQ+AMSVTTTS  VGKFESRFFH++YE EFGRVKGHFGPINALAINPNGLSYASGAEDG
Sbjct:  229 LKTYKTDRPINDAVISETKDHIILGGGQEAMSVTTTSGKVGKFESRFFHLVYEEEFGRVKGHFGPINALAINPNGLSYASGAEDG 313

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BLAST of mRNA_S-firma_M_contig8935.19838.1 vs. uniprot
Match: A0A7S2V5S2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5S2_9STRA)

HSP 1 Score: 150 bits (380), Expect = 1.240e-44
Identity = 69/86 (80.23%), Postives = 79/86 (91.86%), Query Frame = 0

Query:    2 VLKTYKTDRPVNAAVMHPTKEHVILGGGQDAMSVTTTSSSVGKFESRFFHMIYESEFGRVKGHFGPINALAINPNGLSYASGAEDG 87
            VLKTYKT+RPVNAAV+ P K+HV+LGGGQ+AMSVTTT S VGKFE+RF+H++YE EFGRVKGHFGPINAL INP+G SYASGAEDG
Sbjct:   78 VLKTYKTERPVNAAVISPIKDHVLLGGGQEAMSVTTTDSRVGKFETRFYHLVYEREFGRVKGHFGPINALGINPDGKSYASGAEDG 163

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BLAST of mRNA_S-firma_M_contig8935.19838.1 vs. uniprot
Match: A0A7S2UU51_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UU51_9STRA)

HSP 1 Score: 150 bits (379), Expect = 2.100e-44
Identity = 67/85 (78.82%), Postives = 77/85 (90.59%), Query Frame = 0

Query:    3 LKTYKTDRPVNAAVMHPTKEHVILGGGQDAMSVTTTSSSVGKFESRFFHMIYESEFGRVKGHFGPINALAINPNGLSYASGAEDG 87
            LKTYKTDRP+N AV+ PTK+H++LGGGQ+AMSVTTT+  VGKFE+RFFH++YE EFG VKGHFGPINAL INPNG SYASGAEDG
Sbjct:   61 LKTYKTDRPINDAVISPTKDHILLGGGQEAMSVTTTAGKVGKFETRFFHLVYEEEFGTVKGHFGPINALGINPNGRSYASGAEDG 145

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BLAST of mRNA_S-firma_M_contig8935.19838.1 vs. uniprot
Match: A0A7S2I7B8_9STRA (Eukaryotic translation initiation factor 3 subunit I n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2I7B8_9STRA)

HSP 1 Score: 152 bits (385), Expect = 2.300e-43
Identity = 67/85 (78.82%), Postives = 78/85 (91.76%), Query Frame = 0

Query:    3 LKTYKTDRPVNAAVMHPTKEHVILGGGQDAMSVTTTSSSVGKFESRFFHMIYESEFGRVKGHFGPINALAINPNGLSYASGAEDG 87
            LKTYKT+RPVN AV+HPTK+H++LGGGQ+AMSVTTT   VGKFE+RFFH++YE EFG+VKGHFGPINAL +NPNG SYASGAEDG
Sbjct:  231 LKTYKTERPVNDAVIHPTKDHILLGGGQEAMSVTTTRGDVGKFETRFFHLVYEEEFGKVKGHFGPINALGVNPNGRSYASGAEDG 315

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BLAST of mRNA_S-firma_M_contig8935.19838.1 vs. uniprot
Match: A0A6U3VY90_9STRA (Eukaryotic translation initiation factor 3 subunit I n=2 Tax=Thalassiosirales TaxID=33847 RepID=A0A6U3VY90_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.690e-42
Identity = 69/85 (81.18%), Postives = 77/85 (90.59%), Query Frame = 0

Query:    3 LKTYKTDRPVNAAVMHPTKEHVILGGGQDAMSVTTTSSSVGKFESRFFHMIYESEFGRVKGHFGPINALAINPNGLSYASGAEDG 87
            LKTYKTDRPVN AV+  TK+H++LGGGQ+AMSVTTTS  VGKFE+RFFH++YE EFG VKGHFGPINALAINPNG SYASGAEDG
Sbjct:  231 LKTYKTDRPVNDAVISETKDHILLGGGQEAMSVTTTSGKVGKFETRFFHLVYEEEFGSVKGHFGPINALAINPNGRSYASGAEDG 315

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BLAST of mRNA_S-firma_M_contig8935.19838.1 vs. uniprot
Match: A0A7S2NVM0_9STRA (Eukaryotic translation initiation factor 3 subunit I n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NVM0_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.990e-42
Identity = 68/85 (80.00%), Postives = 78/85 (91.76%), Query Frame = 0

Query:    3 LKTYKTDRPVNAAVMHPTKEHVILGGGQDAMSVTTTSSSVGKFESRFFHMIYESEFGRVKGHFGPINALAINPNGLSYASGAEDG 87
            LKTY+TDRPVN AV+ PTK+H++LGGGQ+AMSVTTT+  VGKFE+RFFH++YE EFG VKGHFGPINAL INPNGLSYASGAEDG
Sbjct:  231 LKTYQTDRPVNDAVISPTKDHILLGGGQEAMSVTTTAGKVGKFETRFFHLVYEEEFGIVKGHFGPINALDINPNGLSYASGAEDG 315

[Close]

BLAST of mRNA_S-firma_M_contig8935.19838.1 vs. uniprot
Match: A0A7R9ZSR1_9STRA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZSR1_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.810e-41
Identity = 67/85 (78.82%), Postives = 77/85 (90.59%), Query Frame = 0

Query:    3 LKTYKTDRPVNAAVMHPTKEHVILGGGQDAMSVTTTSSSVGKFESRFFHMIYESEFGRVKGHFGPINALAINPNGLSYASGAEDG 87
            LKTYKTDRPVN AV+   K+H++LGGGQ+AMSVTTTS  VGKFE+RFFH++YE EFG VKGHFGPINA+AINPNGL+YASGAEDG
Sbjct:  223 LKTYKTDRPVNDAVISEHKDHILLGGGQEAMSVTTTSGKVGKFETRFFHLVYEEEFGCVKGHFGPINAIAINPNGLNYASGAEDG 307

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BLAST of mRNA_S-firma_M_contig8935.19838.1 vs. uniprot
Match: A0A7S1DBX8_CYCTE (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBX8_CYCTE)

HSP 1 Score: 147 bits (371), Expect = 2.350e-41
Identity = 67/84 (79.76%), Postives = 76/84 (90.48%), Query Frame = 0

Query:    4 KTYKTDRPVNAAVMHPTKEHVILGGGQDAMSVTTTSSSVGKFESRFFHMIYESEFGRVKGHFGPINALAINPNGLSYASGAEDG 87
            KTYKTDRPVN AV+  TK+H++LGGGQ+AMSVTTTS  VGKFE+RFFH++YE EFG VKGHFGPINALAINPNG S+ASGAEDG
Sbjct:  231 KTYKTDRPVNDAVLSETKDHILLGGGQEAMSVTTTSGKVGKFETRFFHLVYEEEFGTVKGHFGPINALAINPNGRSFASGAEDG 314

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_M_contig8935.19838.1 vs. uniprot

BLAST of mRNA_S-firma_M_contig8935.19838.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KMX5_9PHAE	2.400e-52	95.40	Eukaryotic translation initiation factor 3 subunit...	[more]
A0A835ZF13_9STRA	9.880e-46	82.76	Eukaryotic translation initiation factor 3 subunit...	[more]
A0A7S2RQ21_9STRA	6.200e-45	84.71	Eukaryotic translation initiation factor 3 subunit...	[more]
A0A7S2V5S2_9STRA	1.240e-44	80.23	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A7S2UU51_9STRA	2.100e-44	78.82	Hypothetical protein n=1 Tax=Attheya septentrional...	[more]
A0A7S2I7B8_9STRA	2.300e-43	78.82	Eukaryotic translation initiation factor 3 subunit...	[more]
A0A6U3VY90_9STRA	1.690e-42	81.18	Eukaryotic translation initiation factor 3 subunit...	[more]
A0A7S2NVM0_9STRA	1.990e-42	80.00	Eukaryotic translation initiation factor 3 subunit...	[more]
A0A7R9ZSR1_9STRA	1.810e-41	78.82	Eukaryotic translation initiation factor 3 subunit...	[more]
A0A7S1DBX8_CYCTE	2.350e-41	79.76	Eukaryotic translation initiation factor 3 subunit...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..87 e-value: 1.3E-29 score: 105.5
None	No IPR available	PANTHER	PTHR19877	WD40 REPEAT PROTEIN	coord: 1..87
None	No IPR available	PANTHER	PTHR19877:SF1	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I	coord: 1..87
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 61..87 score: 9.125
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 61..87 score: 9.205
IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	SUPERFAMILY	50998	Quinoprotein alcohol dehydrogenase-like	coord: 2..86

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-firma_M_contig8935	contig	S-firma_M_contig8935:3131..3896 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male	2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90	2022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-firma_M_contig8935.19838.1	mRNA_S-firma_M_contig8935.19838.1	Sphaerotrichia firma Sfir_13m male	mRNA	S-firma_M_contig8935 3131..3896 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-firma_M_contig8935.19838.1 ID=prot_S-firma_M_contig8935.19838.1|Name=mRNA_S-firma_M_contig8935.19838.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=88bp
QVLKTYKTDRPVNAAVMHPTKEHVILGGGQDAMSVTTTSSSVGKFESRFF
HMIYESEFGRVKGHFGPINALAINPNGLSYASGAEDG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011047	Quinoprotein_ADH-like_supfam
IPR001680	WD40_repeat
IPR017986	WD40_repeat_dom
IPR015943	WD40/YVTN_repeat-like_dom_sf