prot_S-firma_M_contig890.19791.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig890.19791.1
Unique Nameprot_S-firma_M_contig890.19791.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length1143
Homology
BLAST of mRNA_S-firma_M_contig890.19791.1 vs. uniprot
Match: D8LMU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU4_ECTSI)

HSP 1 Score: 923 bits (2386), Expect = 0.000e+0
Identity = 666/1074 (62.01%), Postives = 745/1074 (69.37%), Query Frame = 0
Query:   94 MFDLPGPYSETRHRLPEISVIDAKGKEKRRWYHGRDLGPLDVGSVIVLRDNELGTPIAAYFVGKEKNQVFIAGNGVACSPTLLGGFDREDGAGEGSERGGGEAPLGR---------SSGRRDASSGKEP----PPPSFRHLA-NKERAERSREAALRELVGVGHVDGRGGTGDGXXXXXXXXXXGLGAHELFRQAADLGDPESYFYLALLQSAGLGGGEPGGSKEQARVWALCGSHADNTNAHLLLAHRFHSGVEDGED--TCQDAVHFYQLAVDELRLGLEDASQDLYPPADTYRLGGEHGVGGWGVVAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAQD---FHDEMLLRAEAGDPSANMMMGYLYMVGSEEKMGITPDFVKAEQLMWKAVRNGDPGGYAYLAWMHHNGHIGXXXXXXXXXRLPDGGADTDDRAANKRPGWTPGPRGEEDLLEAAVAYWGEERVTRANAGKGV--AVEDGGGAPGGRGGGLGRFRQATAXXXXXXXXXXXXVPDGEXXXXXXXXXX----DSMGRRWEEGDEGGVGGPGLRPGEDVWGGVASTMGDYWPWETIGGGVSGAIAAADLYQEGFRAGDPACGTALGDMWLHSEYSDTRDGRGAGGKWAMLQAYILFQKALDMGKLYGEPQATAALRLGTMFHYGMVPFLGHNATEALSFYQESADNGGMDALLVLADLHLHGFKGAVEKSCATSANLFQKYANLCIKDAALAHGKITFEQGQYQEAFVHYLIAAEQGNKEGQASLAWLLDKSMAAAAAPTGSPFTLLRRAWDRLRGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESQRGRRNRRSGIGGVVDAVRELGGDPEAMARRYRRLAAEQGDSEARCDIADHLYRQAKAKGAVPSGIGWLP-WATPDSNDTAQKKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTPEVFGWDGKHGYGRESEEERRARESDPARLLSDAMGFYRLAAQVEEGGGGTG------RGLFSLGWMHQASLG 1135
            MFD PG Y+  RHRLPE  V+DA GKE+R  Y+G D+GPLDVGSVIVLR    G  +AAY VG+E++Q                G D    +G G                        RR+ S+GK P    P    R  A N ERA   R  ALRELVG+G     G     XXXXXXXXXX   AHELFRQAADLGDP+SYFYLALLQSAGL GGE G  K+QAR WALCG+HA NT+A+LLL +RF +G+E+ +D  TC +AVHFYQLAVDELRLGLEDASQDLYPPAD +RLG EHG+G WGV  G XXXXXXXXX        XXXXXXXXXXXX    A+    F D+ LLRAEAGDPSA MMMGYL+MVGSEE MGITPDF KAEQLMW+AV+NGDPGGYAYLAWMHHNGHIGXXXXXXXXXRLPDGG + D+RA     G     R E DL   A A WG+ERV   N G+GV   + +GGG  GG  GG    R +    XXX       V DG+              D  G+R   G++G      L PGED+WGG AS   + W WETIGGGVSGAIAAADLY +GF+AGDPAC T L DMWLH EYSDTRDGRGAGGK+ MLQAY+LF +AL+MGK +GEPQ  AALR+G+MF +G+VP+LG+N TEALS+YQESADNGGMDA+LVLADLHL GFKGA+EKSC T+A L+QKYANLCIKD ALAHG++TFEQGQYQEAFVHYLIAAEQGNKEGQASLAWLLD+SMAAAA  T  P +L+RRAWD L G GXXXXXXXXXXXXX                        XXXXXXXXXX           +RGRR RRSG+GGV DAVR++GGDPEAMARRYRRLAAEQGDSEARCDIADHLYRQAK  GAV  G GWLP WA         +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          +T           YGRESE+ER ARESD A+LLSDA+ +YRLAA+   G GG G      RGLFSLGWMHQ  +G
Sbjct:    1 MFDPPGRYNGARHRLPEAFVLDATGKERRMPYYGLDIGPLDVGSVIVLRGAPRGEHLAAYLVGEEEHQ----------------GADGSQESGRGXXXXXXXXXXXXXXXXXXXXXDDARRNPSAGKPPFSSSPDSGSRSQAENLERAAHIRGEALRELVGIG-----GXXXXXXXXXXXXXXXXASAHELFRQAADLGDPDSYFYLALLQSAGLHGGEAGAGKDQARTWALCGTHAANTDANLLLGYRFLAGLEERKDGITCNEAVHFYQLAVDELRLGLEDASQDLYPPADVFRLGVEHGLGAWGVAGGXXXXXXXXXXGLGYLPGGXXXXXXXXXXXXQGGPARGDMAFADDALLRAEAGDPSATMMMGYLHMVGSEE-MGITPDFAKAEQLMWEAVKNGDPGGYAYLAWMHHNGHIGXXXXXXXXXRLPDGGGEGDERAKG---GGKLASRREGDLRAMAYALWGKERVDGTNVGRGVPETITEGGGGAGGPAGGKXXSR-SRGVKXXXGSAKEIGVDDGDDGYDDDNDYYGYSDDGRGQRAAGGEDGRE----LMPGEDMWGGEASE--ESWEWETIGGGVSGAIAAADLYVDGFKAGDPACATGLADMWLHGEYSDTRDGRGAGGKYPMLQAYLLFTQALEMGKKFGEPQTIAALRIGSMFQHGLVPYLGYNTTEALSYYQESADNGGMDAILVLADLHLAGFKGALEKSCKTAAGLYQKYANLCIKDGALAHGRLTFEQGQYQEAFVHYLIAAEQGNKEGQASLAWLLDRSMAAAAPGTSWPSSLVRRAWDSLVGDGXXXXXXXXXXXXXDIGPSGGDERVEDASGWPDEGGSGXXXXXXXXXXM----------RRGRRRRRSGVGGVADAVRQMGGDPEAMARRYRRLAAEQGDSEARCDIADHLYRQAKDMGAVAPGTGWLPAWA---------RTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKPIGQGGIGATXXXX----XXXYGRESEDERLARESDAAQLLSDAVAYYRLAAEGGRGEGGLGGSSPSQRGLFSLGWMHQHGVG 1019          
BLAST of mRNA_S-firma_M_contig890.19791.1 vs. uniprot
Match: A0A6H5JWA9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWA9_9PHAE)

HSP 1 Score: 301 bits (770), Expect = 2.770e-86
Identity = 259/660 (39.24%), Postives = 305/660 (46.21%), Query Frame = 0
Query:   34 MSTRDAWAGEPRVIYRDVLDRIESLKISRAG--------EDTTNIDNNXXXXXXXXXXXXX--------------------NKRLVSFMFDLPGPYSETRHRLPEISVIDAKGKEKRRWYHGRDLGPLDVGSVIVLRDNELGTPIAAYFVGKEKNQVFIAGNGVACSPTLLG-GFDREDGAGEGSERGG--------------------GEAPLGRSSGRRDASSGK-----EPPPPSFRHLANKERAERSREAALRELVGVGHVDGRGGTGDGXXXXXXXXXXGLGAHELFRQAADLGDPESYFYLALLQSAGLGGGEPGGSKEQARVWALCGSHADNTNAHLLLAHRFHSGVEDGEDTCQDAVHFYQLAVDELRLGLEDASQDLYPPADTYRLGGEHGVGGWGVVAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAQDFHDEMLLRAEAGDPSANMMMGYLYMVGSEEKMGITPDFVKAEQLMWKAVRNGDPGGYAYLAWMHHNGHIGXXXXXXXXXRLPDGGADTDDRAANKRPGWTPGPRGEEDLLEAAVAYWGEERVTRANAGKGV--AVEDGGGAPGGRGGGLG--RFRQATAXXXXXXXXXXXXVPDGEXXXXXXXXXXDSMGRRWEEGDEGGVGGPGLRPGEDVWG 635
            MS R+ W GE RVIY DV  R+  L+  RA         E   ++  N           XX                     KR VS MFD PG Y+E RH+LPE  V+DA GKE+R  Y+G D+GPLDVGSVIVLR    G  +AAY VG+E++QVFI GNGVAC+PTLLG GF R+  A + S+  G                              RR  S+GK      P   S     N ERA   R  ALRELVG+G   G GGT +G          G  AHELFRQAADLGDP+SYFYLALLQSAGL GGE G  K+QAR WALCG+HA NT+A+LLL    +          + AV  +    D   +G    + +   PA    L                                                       +  R     P+ N  + +       ++           QLMWKAVRNGDPGGYAYLAWMHHNGHIGXXXXXXXXXRLPDGG + D+RA     G     R E DL   A A WG ERV   N G+GV   + +GG   GG  GG G  R R  T   X           D +          D  G+R      GG GG  L PGEDVWG
Sbjct:    1 MSAREGWEGESRVIYEDVGARVSRLQARRAAAYFAGRKRESEKHVAGNNGGDKDIGSGSXXXXXXXXXXXRSGRGNALGSSGKRFVSLMFDPPGRYNEARHQLPEAFVVDATGKERRMPYYGLDIGPLDVGSVIVLRGAPRGQHLAAYLVGEEEHQVFIVGNGVACAPTLLGDGFLRDREATDASQESGRGXXXXXXXXXXXXXXXXXXXXXXXNGDDARRKPSAGKTRLSSSPDSGSRSQAKNLERAAHIRGEALRELVGIGG-GGAGGTSNGGSGEAR----GATAHELFRQAADLGDPDSYFYLALLQSAGLHGGEAGAGKDQARTWALCGTHAANTDANLLLGFSHYQA--------RSAVSPFVWR-DASAVGHHPVANNFTTPALFVSLVST--------------------------------------------------PPLFRRPLDSLPNTNTPVRHRATDRPTDR---------GAQLMWKAVRNGDPGGYAYLAWMHHNGHIGXXXXXXXXXRLPDGGGEGDERAKG---GGKLACRREGDLRAMAYALWGTERVEGTNVGRGVPETITEGGDDDGGPAGGKGGSRSRGVTGGSXSGNKIGVDGDDDYDDNDDYYGYSDDGRGQR----AAGGEGGRELMPGEDVWG 580          
BLAST of mRNA_S-firma_M_contig890.19791.1 vs. uniprot
Match: A0A6H5KB87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB87_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 5.890e-59
Identity = 182/327 (55.66%), Postives = 204/327 (62.39%), Query Frame = 0
Query:  327 HRFHSGVEDGED--TCQDAVHFYQLAVDELRLGLEDASQDLYPPADTYRLGGEHGVGGWGVVAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGA----QDFHDEMLLRAEAGDPSANMMMGYLYMVGSEEKMGITPDFVKAEQLMWKAVRNGDPGGYAYLAWMHHNGHIGXXXXXXXXXRLPDGGADTDDRA------ANKRPGWTPGPRGEEDLLEAAVAYWGEERVTRANAGKGV--AVEDGGGAPGGRGGGLGRFRQATAXXXXXXXXXXXXVPDGEXXXXXXXXXXDSMGRRWEEGDEGGVGGPGLRPGEDVWGGVAS 639
            +RF +G E+ +D  TC +AVHFYQLAVDELRLGLEDASQDLYP AD  RLG +HG+G WGV AGGXXXXXXXXX       XXXXXXXXXXXXXX  G       F D+MLLRAEAGDPSA MMMGYL+MVGSEE  GITPDF KAEQ    AVRNGDPG YAYLAWMHHNG++G         RLPDGG + D+RA      A++R G         DL   A A WG++RV   N G+GV   + +GGG  GG                          P G XXXXXXXXXX   G   +EGD+       L PGEDVWGG AS
Sbjct:   17 YRFLAGPEERKDGITCNEAVHFYQLAVDELRLGLEDASQDLYPLADVSRLGVDHGLGAWGVAAGGXXXXXXXXXGGVGYLPXXXXXXXXXXXXXXQGGPARGDMAFADDMLLRAEAGDPSATMMMGYLHMVGSEET-GITPDFAKAEQ----AVRNGDPGCYAYLAWMHHNGYMGGHLPPYLQPRLPDGGGEGDERAKGDGKLASRREG---------DLRAMAYALWGKKRVEGTNVGRGVPETITEGGGGVGG--------------------------PAGXXXXXXXXXXXXXSGCG-KEGDQE------LMPGEDVWGGEAS 296          
BLAST of mRNA_S-firma_M_contig890.19791.1 vs. uniprot
Match: A0A6H5J774_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J774_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 1.990e-15
Identity = 86/182 (47.25%), Postives = 98/182 (53.85%), Query Frame = 0
Query:  779 GAVEKSCATSANLFQKYANLCIKDAALAHGKITFEQGQYQEAFVHYLIAAEQGNKEGQASLAWLLDKSMAAAAAPTGSPFTLLRRAWDRLRGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESQRGRRNRRSGIGGVVDAVRELGGDPEAMAR 960
            GA+E SC  +A L+QK ANLCIKD ALA G++TFEQGQ                         LLD+SMAAA A T  P +L+RRAW+ L G GXXXXXXXXX                              XXXXXXXXXXXXXX             SG+GGV DAVR++GGDPEAMAR
Sbjct:   19 GALENSCKKAAGLYQKCANLCIKDGALARGRLTFEQGQ-------------------------LLDRSMAAAPAGTSWPSSLVRRAWESLVGDGXXXXXXXXXADSGPSGGDERVKDAMASGWPDEERSAGGSXXXXXXXXXXXXXX-------------SGVGGVADAVRQMGGDPEAMAR 162          
BLAST of mRNA_S-firma_M_contig890.19791.1 vs. uniprot
Match: A0A6H5JW92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW92_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 3.340e-11
Identity = 40/63 (63.49%), Postives = 47/63 (74.60%), Query Frame = 0
Query: 1079 GYGRESEEERRARESDPARLLSDAMGFYRLAAQVEEGGGGTG------RGLFSLGWMHQASLG 1135
            GYGRESE+ER ARESD A+LLSDA+ +Y+LAA+   G GG G      RGLFSLGWMHQ  +G
Sbjct:   70 GYGRESEDERLARESDAAQLLSDAVAYYKLAAEGGGGEGGLGGSSPSQRGLFSLGWMHQHGVG 132          
BLAST of mRNA_S-firma_M_contig890.19791.1 vs. uniprot
Match: A0A6H5JUQ8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUQ8_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 6.840e-8
Identity = 40/87 (45.98%), Postives = 45/87 (51.72%), Query Frame = 0
Query:  470 MWKAVRNGDPGGYAYLAWMHHNGHIGXXXXXXXXXRLPDGGADTDDRAANKRPGWTPGPRGEEDLLEAAVAYWGEERVTRANAGKGV 556
            MWKA RNGDPGGYAYLAWMHHNG            R   GG     + A++R G         DL   A A WG ERV   N G+G+
Sbjct:    1 MWKAARNGDPGGYAYLAWMHHNGD----------ERAKGGG-----KLASRREG---------DLRAMAYALWGMERVEGTNVGRGI 63          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig890.19791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LMU4_ECTSI0.000e+062.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWA9_9PHAE2.770e-8639.24Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KB87_9PHAE5.890e-5955.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J774_9PHAE1.990e-1547.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW92_9PHAE3.340e-1163.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUQ8_9PHAE6.840e-845.98Reverse transcriptase Ty1/copia-type domain-contai... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 763..800
e-value: 99.0
score: 5.0
coord: 319..355
e-value: 290.0
score: 0.9
coord: 725..762
e-value: 8.3
score: 14.4
coord: 801..832
e-value: 56.0
score: 7.2
coord: 439..478
e-value: 0.018
score: 24.2
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 704..717
e-value: 180.0
score: 3.0
coord: 817..832
e-value: 67.0
score: 4.4
coord: 280..310
e-value: 23.0
score: 5.8
coord: 439..478
e-value: 0.29
score: 11.9
coord: 267..279
e-value: 69.0
score: 4.3
coord: 726..761
e-value: 0.49
score: 11.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 225..378
e-value: 7.1E-8
score: 33.3
coord: 657..867
e-value: 2.9E-18
score: 67.6
coord: 427..500
e-value: 6.6E-8
score: 33.4
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 267..1134
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 253..352
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 434..493
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 705..841

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig890contigS-firma_M_contig890:503..9274 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig890.19791.1mRNA_S-firma_M_contig890.19791.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig890 503..9274 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig890.19791.1 ID=prot_S-firma_M_contig890.19791.1|Name=mRNA_S-firma_M_contig890.19791.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=1143bp
ASAIIEAIRKTRSSPRWRRAARGSGTVSRAKGGMSTRDAWAGEPRVIYRD
VLDRIESLKISRAGEDTTNIDNNGSGGGGGGGGNTNNKRLVSFMFDLPGP
YSETRHRLPEISVIDAKGKEKRRWYHGRDLGPLDVGSVIVLRDNELGTPI
AAYFVGKEKNQVFIAGNGVACSPTLLGGFDREDGAGEGSERGGGEAPLGR
SSGRRDASSGKEPPPPSFRHLANKERAERSREAALRELVGVGHVDGRGGT
GDGHGIGGGAGGEGLGAHELFRQAADLGDPESYFYLALLQSAGLGGGEPG
GSKEQARVWALCGSHADNTNAHLLLAHRFHSGVEDGEDTCQDAVHFYQLA
VDELRLGLEDASQDLYPPADTYRLGGEHGVGGWGVVAGGGGGGGAGLGYL
PGGAGVGGGGGGGGGGGGAGVGAQDFHDEMLLRAEAGDPSANMMMGYLYM
VGSEEKMGITPDFVKAEQLMWKAVRNGDPGGYAYLAWMHHNGHIGGHLPP
HLQPRLPDGGADTDDRAANKRPGWTPGPRGEEDLLEAAVAYWGEERVTRA
NAGKGVAVEDGGGAPGGRGGGLGRFRQATAGGGDGGGGGWRRVPDGEDDV
EGGGGGGDSMGRRWEEGDEGGVGGPGLRPGEDVWGGVASTMGDYWPWETI
GGGVSGAIAAADLYQEGFRAGDPACGTALGDMWLHSEYSDTRDGRGAGGK
WAMLQAYILFQKALDMGKLYGEPQATAALRLGTMFHYGMVPFLGHNATEA
LSFYQESADNGGMDALLVLADLHLHGFKGAVEKSCATSANLFQKYANLCI
KDAALAHGKITFEQGQYQEAFVHYLIAAEQGNKEGQASLAWLLDKSMAAA
AAPTGSPFTLLRRAWDRLRGTGSSSSSSSSSSSGSSNTDSSNSDSSSSSS
DSVGDVEASRGRSFGAEAGAGAGAGAGVESQRGRRNRRSGIGGVVDAVRE
LGGDPEAMARRYRRLAAEQGDSEARCDIADHLYRQAKAKGAVPSGIGWLP
WATPDSNDTAQKKDTTTTTTTTTTEGHSQEESRSKKGDGSEVEGGEGGGA
GGGAGPAGGDGAAASSSTPEVFGWDGKHGYGRESEEERRARESDPARLLS
DAMGFYRLAAQVEEGGGGTGRGLFSLGWMHQASLGGFGWFVF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR006597Sel1-like