mRNA_S-firma_F_contig10325.472.1 (mRNA) Sphaerotrichia firma ET2_F female
|
Overview
Homology
BLAST of mRNA_S-firma_F_contig10325.472.1 vs. uniprot
Match: A0A151Z6I8_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z6I8_9MYCE) HSP 1 Score: 181 bits (459), Expect = 4.070e-47 Identity = 118/340 (34.71%), Postives = 187/340 (55.00%), Query Frame = 1
Query: 1 KFGTLSALSDDFVAMATRVSKTIIHELRLPPHLKTLMPDVFKGVAGGLKYTNSSALFKLAVDERGIYGSDEIAAKAIGHELKGGLQVAYAGIRGLVVPMSVKVDYLGFSVLATALLPISPKVPPVFGSDDAANTMHSDNPEVAAAMAQLGKSLNLAEHVCGLRAGATLNMAACADIEVKIGSDGVAYVLDTHRLMPPEAPSETPHLPPLKNGVLSRLLRPLFVKSWKQPLNPDTFSYFSQHDARRADHAAELKAATRHLVGVLVPEAATAF----DGLKAYRPQGAGGTMCHRYGVNIRHLGLLRELLTTSRAKLAVLCELVARSLKRLLRAALRQSLTI 1008
K+ TLS+LS DF+ A K II E + KT+ P G AGG+KY + LFK A+D IYG DE + KA GHELK ++ Y G G+ VP+ V +D+ GF ++A ++LPI+ K V+GS D ++H+ N E+ M +N+ H+ G+ + DIE +G DG+ YVLD R+ PP + L RL+RP FV+++ PL+ D+++ F + D++ + +++ AT +L G +P+ A D + Y+ + HR G+N+R+LGL+R + + + K +L E+VAR+LK L+R LR+ + +
Sbjct: 245 KYKTLSSLSKDFLHAAITYGKIIIEEAFIDTKYKTIKPTSVGGQAGGIKYVYNGILFKFALDWIQIYGGDEFSMKAAGHELKSVMR--YCGCDGIHVPLMVVLDHRGFRLVAMSILPITKKSI-VYGSSDGGKSIHASNSELNEKMKLAASKMNIKGHLAGINQEKEF-IYGPTDIEGHLGWDGLFYVLDCARVFPPTVDRT------IDESFLYRLMRPEFVQNYHTPLSSDSYTPFGKVDSKMEINNQQVRDATDYLFGQCIPKMAAWMENHVDSIDWYQQL---TEIIHREGINVRYLGLIRNQIQSEKLKSIILTEIVARTLKNLIRENLREKMKL 571
BLAST of mRNA_S-firma_F_contig10325.472.1 vs. uniprot
Match: L8HEJ1_ACACA (Protein unc-45 homolog B n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HEJ1_ACACA) HSP 1 Score: 174 bits (442), Expect = 7.560e-45 Identity = 121/331 (36.56%), Postives = 172/331 (51.96%), Query Frame = 1
Query: 13 LSALSDDFVAMATRVSKTIIHELRLPPHLKTLMPDVFKGVAGGLKYTNSSALFKLAVDERGIYGSDEIAAKAIGHELKGGLQVAYAGIRGLVVPMSVKVDYLGFSVLATALLPISPKVPPVFGSDDAANTMHSDNPEVAAAMAQLGKSLNLAEHVCGLRAGATLNMAACADIEVKIGSDGVAYVLDTHRLMPPEAPSETPHLPPLKNGVLSRLLRPLFVKSWKQPLNPDTFSYFSQHDARRADHAAELKAATRHLVGVLVPEAAT----AFDGLKAYRPQGAGGTMCHRYGVNIRHLGLLRELLTTSRAKLAVLCELVARSLKRLLRAALR 993
L L+ DFVA A K II E+ LP KT+ P GVAGG KY + LFK A+D G+YG DE +AK HELKG + +RGL P+ +DY GF + A+++LPIS V+GS D T+ DN ++ M + G+ +N+ H+ G A L A DIE +G D YVLD R PP P+ H G L +LLRP FV ++ +PL+ D F F + A E++ AT HL+ ++P A F+ + HR G+N R+LG++R R + +L E++AR +K ++RA +R
Sbjct: 1160 LCTLAKDFVAAAKMYGKIIISEVFLPYKQKTIKPISIGGVAGGEKYIHRGILFKFAMDWEGLYGGDEYSAKVASHELKGLARYFSCAVRGLHFPLMALIDYRGFRLTASSILPISHADTLVYGSCDMGATVKDDNKVLSKLMEKAGRQMNIKGHLAGKNGDAFLY--APTDIEGHLGRDRRFYVLDFARTFPPATPNIQTH----PRGFLYQLLRPEFVFAYHKPLSSDAFMVFGKKS--NATDNPEIREATNHLLNTVIPGFANWLERHFEEDDERVLTSTLSVLLHREGINNRYLGVVRIHCRNPRLRHFLLREMIARVVKNIMRAEMR 1482
BLAST of mRNA_S-firma_F_contig10325.472.1 vs. uniprot
Match: L8H466_ACACA (Clu domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H466_ACACA) HSP 1 Score: 173 bits (439), Expect = 1.400e-44 Identity = 129/335 (38.51%), Postives = 181/335 (54.03%), Query Frame = 1
Query: 4 FGTLSALSDDFVAMATRVSKTIIHELRLPPHLKTLMPDVFKGVAGGLKYTNSSALFKLAVDERGIYGSDEIAAKAIGHELKGGLQVAYAGIRGLVVPMSVKVDYLGFSVLATALLPISPKVPPVFGSDDAANTMHSDNPEVAAAMAQLGKSLNLAEHVCGLRAGATLNMAACADIEVKIGSDGVAYVLDTHRLMPPEA-PSETPHLPPLKNGVLSRLLRPLFVKSWKQPLNPDTFSYFSQHDARRADHAAELKAATRHLVGVLVPEAATAFDGLKAYRPQGAGGT-MCHRYGVNIRHLGLLRELLTTSRAKLAVLCELVARSLKRLLRAALRQSL 1002
+ LS+L+ DFV +A K II E LP KT+ P G AGG KY LFK AVD GIY DE ++KA GHELKG + I G+ VP+ +DY GF ++A ++LP+ V+GS+D ++H+D+P + M + K LN+ HV G R+ + DIE G D Y+LD R+ PPEA P +P K L LLRP FVK PL+ D FS F QH + H E+ AT+ L ++P A D R +G T + HR G+N RHLG +R L++++ K +L E+++R++K LR LR+ +
Sbjct: 93 YNKLSSLAHDFVYVAKTYGKIIILERFLPSGQKTIKPVDIGGTAGGEKYICQGILFKFAVDTVGIYSGDEYSSKAAGHELKGLMGYYQCQIEGVHVPLCTLIDYRGFRLIAMSILPLY-YGGLVYGSNDGGLSIHADDPLMNHMMKRAAKKLNIKGHVAG-RSTDKKFIYGPTDIEGHKGQDDRYYLLDFARVYPPEAMPEGSP-----KASYLYCLLRPEFVKRNPVPLSSDAFSRFGQH--HKDVHEREVVEATQRLHRKVIPRFAAWLDSQDERRLKGLKLTQLMHREGINNRHLGRIRFLVSSAPVKQLLLNEMLSRAIKCSLRLMLRRKM 418
BLAST of mRNA_S-firma_F_contig10325.472.1 vs. uniprot
Match: L8HAW3_ACACA (Clu domain-containing protein (Fragment) n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HAW3_ACACA) HSP 1 Score: 173 bits (439), Expect = 1.530e-44 Identity = 123/338 (36.39%), Postives = 181/338 (53.55%), Query Frame = 1
Query: 1 KFGTLSALSDDFVAMATRVSKTIIHELRLPPHLKTLMPDVFKGVAGGLKYTNSSALFKLAVDERGIYGSDEIAAKAIGHELKGGLQVAYAGIRGLVVPMSVKVDYLGFSVLATALLPISPKVPPVFGSDDAANTMHSDNPEVAAAMAQLGKSLNLAEHVCGLRAGATLNMA-ACADIEVKIGSDGVAYVLDTHRLMPPEAPSETPHLPPLKNGVLSRLLRPLFVKSWKQPLNPDTFSYFSQHDARRADHAAELKAATRHLVGVLVPEAATAFDGLKAYRPQGAG-----GTMCHRYGVNIRHLGLLRELLTTSRAKLAVLCELVARSLKRLLRAALRQ 996
++ + L+ DF A K II E LP +T+ P V G+AGG KY + FK A+D+ GIYGSDE A KA H+LKG ++ Y+ I GL VP+ +DY GF ++A ++LPI V+GS D +H+++ ++ MA G+ LNL H+ G A M DIE +G DG YVLD R++PP PS+ KNG L L+RP F+K +PL+ D FS F A +H AE++ AT L+ ++P+ A D + P + H+ G+N+R+LG LR + + K L E++AR +K + +LR+
Sbjct: 676 RYELIHNLAQDFSITAKLYGKIIIAEAFLPRKYQTIKPCVVGGLAGGPKYIYNGIFFKFAMDDLGIYGSDENAMKAAAHDLKGLMR--YSDIAGLSVPLIQLIDYRGFRLVALSILPIEQSTL-VYGSADGGVVVHTEHSQLNDYMAAAGQKLNLKGHLGGSENCADRKMIYGPTDIEGHVGLDGRLYVLDFSRVLPPTTPSKGK-----KNGYLYELMRPEFLKKNPKPLSSDAFSPFGVDSA--TEHNAEIREATNRLLKEVIPKFAAYLD---LHYPNAEDLCRHLSPLIHKEGINVRYLGRLRYYVKSVHLKQLFLHEMIARVVKVAVHRSLRK 1000
BLAST of mRNA_S-firma_F_contig10325.472.1 vs. uniprot
Match: F4PQD8_CAVFA (Histidine kinase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PQD8_CAVFA) HSP 1 Score: 170 bits (431), Expect = 1.960e-43 Identity = 120/332 (36.14%), Postives = 177/332 (53.31%), Query Frame = 1
Query: 19 ALSDDFVAMATRVSKTIIHELRLPPHLKTLMPDVFKGVAGGLKYTNSSALFKLAVDERGIYGSDEIAAKAIGHELKGGLQVAYAGIRGLVVPMSVKVDYLGFSVLATALLPISPKVPPVFGSDDAANTMHSDNPEVAAAMAQLGKSLNLAEHVCGLRAGATLNMAACADIEVKIGSDGVAYVLDTHRLMPPEAPSETPHLPPLKNGVLSRLLRPLFVKSWKQPLNPDTFSYFSQHDARRADHAAELKAATRHLVGVLVPEAATAF-------DGLKAYRPQGAGGTMCHRYGVNIRHLGLLRELLTTSRAKLAVLCELVARSLKRLLRAALR 993
AL+ DFV + + II E LP KT+ P G+AGG K+ LFK A+D+ YGSD A GHELKG + V AGI+ L +P+ VDY GF V+A ++LP+ K ++GS+D T+H+ + ++ + + K LN+ H CG + + + AD+E G DG Y+LD RL PPEAP + +K G L RLLRP FV+++KQ L D+FS F + + +H E AT +L +PE A D + + + H+ GVN+R+LG +R+L + K + E+ AR +K+ +R LR
Sbjct: 746 ALTQDFVYASMTFGRVIISERYLPLREKTIPPIDIGGLAGGDKFIVHGILFKFAIDKENFYGSDYAAGCVAGHELKGLINVFNAGIKDLSLPLMALVDYRGFRVIAMSILPVD-KDSIIYGSNDYGMTIHNSDKYLSERLEECAKLLNIKSHHCGEQG---TQVHSPADLEGHDGFDGRYYLLDFARLFPPEAPKKG-----IKMGHLYRLLRPEFVRNYKQTLCSDSFSRFIKGH-KDEEHNRETVEATLYLFNTTIPELAEELNRFTLDIDNIYTFPIT----EILHKNGVNVRYLGHVRQLCESPDMKSLIFVEMCARVIKQQIRQKLR 1063
BLAST of mRNA_S-firma_F_contig10325.472.1 vs. uniprot
Match: L8HDX8_ACACA (C2 domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HDX8_ACACA) HSP 1 Score: 166 bits (421), Expect = 3.920e-42 Identity = 125/345 (36.23%), Postives = 183/345 (53.04%), Query Frame = 1
Query: 22 LSDDFVAMATRVSKTIIHELRLPPHLKTLMPDVFKGVAGGLKYTNSSALFKLAVDERGIYGSDEIAAKAIGHELKGGLQVAYAGI-------RGLVVPMSVKVDYLGFSVLATALLPISPKVPPVFGSDDAANTMHSDNPEVAAAMAQLGKSLNLAEHVCG--LRAGATLNMAACADIEVKIGSDGVAYVLDTHRLMPPEAPSETPHLPPLKNGVLSRLLRPLFVKSWKQPLNPDTFSYFSQHDARRAD----HAAELKAATRHLVGVLVPEAA---TAF-DGLKAYRPQGAGGTMC----HRYGVNIRHLGLLRELLTTSRAKLAVLCELVARSLKRLLRAALR 993
L +F +A +++ I+ EL P K + P G+AGG KY + LFK A+D RG+Y DE A KA HE+KG AY L P+ +DY GF + AT++LP+ P V+GS D + T+H+ ++ A M + G++LNL H L G + + DIE +G+DG YVLDT R+ PP P+ P LK L RL+RP FVK + PL D +S ++ HD + H AE+ AT HLV ++P A T F + L A+R + HR G+N R+LG++R+ +T + + ++L E+V+R LK LR +R
Sbjct: 349 LVKEFTEIAEVIAQIIVDELHCPVAEKLIPPTQLGGMAGGEKYLSHGILFKFAIDSRGLYNGDEFAMKATQHEIKG--LTAYINYSLNSNFPNTLHFPVMSVIDYKGFRLSATSILPVGPNTI-VYGSADGSKTVHNKYKDMNALMKKAGRALNLKPHWVTPLLPGGPKVLICGPGDIEGHLGTDGRFYVLDTARVFPPTTPT-----PELKGSFLYRLMRPEFVKVNEYPLCSDAYSRWA-HDPDNPNVLKQHNAEIVEATNHLVQTVIPAFAFFETIFIESLNAWRSFVEDMRVLVIDMHRGGINCRYLGVIRQHVTNTNLRKSMLIEMVSRVLKNELREHMR 684
BLAST of mRNA_S-firma_F_contig10325.472.1 vs. uniprot
Match: F1A264_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A264_DICPU) HSP 1 Score: 165 bits (417), Expect = 1.550e-41 Identity = 122/349 (34.96%), Postives = 184/349 (52.72%), Query Frame = 1
Query: 1 KFGTLSALSDDFVAMATRVSKTIIHELRLPPHLKTLMPDVFKGVAGGLKYTNSSALFKLAVDERGIYGSDEIAAKAIGHELKGGLQVAYAGIRGLVVPMSVKVDYLGFSVLATALLPISP-KVPPVFGSDDAANTMHSDNPEVAAAMAQLGKSLNLAEHVCGLRAGATLNMAACADIEVKIGSDGVAYVLDTHRLMPP------------EAPSETPHLPPLKNGVLSRLLRPLFVKSWKQPLNPDTFSYFSQHDA-RRADHAAELKAATRHLVGVLVPEAATAFDGLKAYRPQGAGGT-MCHRYGVNIRHLGLLRELLTTSRAKLAVLCELVARSLKRLLRAALRQSL 1002
K+ +SALS DF+ AT K II E + KT+ P G AGG+KY + LFK A D IY DE + K+ HELK ++ Y G GL VP+ + Y GF+++A + LPIS V+GS +A T+H+ N + M K LN+ H+ G+ L ADIE IG+DG+ YVLD R+ PP + SE L +L RP FV+++++PL+ D +S F + D R ++ E++ AT +L + +P+ + + + T + HR G+N+R+LGL+R+ + S + +L E++AR LK LLRA LR+ +
Sbjct: 350 KYKAISALSKDFIHTATTYGKIIIEEAFINDKFKTIKPVPVGGKAGGVKYAYNGILFKFAQDWIKIYSGDEFSMKSANHELKSVMR--YFGCEGLHVPLMALLSYRGFTLVAISFLPISRVNETLVYGSHNAGITVHASNEDFNEKMKLAAKKLNIKGHIAGVDGQQFLY--GPADIEGHIGTDGLYYVLDFARVFPPTIDSILEQNDLNHSHSEDEEDHHRNETYLYKLFRPEFVQNYQKPLSSDAYSPFCKKDELNRYENNQEVREATHYLFYMYIPKISKWIESNATTIDWHSRLTEIIHREGINVRYLGLIRQNIKDSILRGILLSEIIARVLKNLLRAELREKM 694
BLAST of mRNA_S-firma_F_contig10325.472.1 vs. uniprot
Match: L8HAI0_ACACA (Clu domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HAI0_ACACA) HSP 1 Score: 159 bits (402), Expect = 1.220e-39 Identity = 122/358 (34.08%), Postives = 184/358 (51.40%), Query Frame = 1
Query: 13 LSALSDDFVAMATRVSKTIIHELRLPPHLKTLMPDVFKGVAGGLKYTNSSALFKLAVDER-------GIYGS----DEIAAKAIGHELKGGLQVAYAGIRGLVVPMSVKVDYLGFSVLATALLPISPKVPPVFGSDDAANTMHSDNPEVAAAMAQLGKSLNLAEHVCGLRAGATLNMAACADIEVKIGSDGVAYVLDTHRLMPPEAP--SETPHLPPLKNGVLSRLLRPLFVKSWKQPLNPDTFSYFSQHDARRADHAAELKAATRHLVGVLVPEAATAFDGLKA--------YRPQGAGGTM--------CHRYGVNIRHLGLLRELLTTSRAKLAVLCELVARSLKRLLRAALRQS 999
+S LS DFV A K II+EL +P KT+ P GVAGG KY L+K +D +YG D+ A KA G EL+G +A + + L VP+ +DY GF ++AT+LLPI P +GS+DA T+ + + + M LG+ LNL +H+ G + + + DIE +G+DG Y+LD RLMPPE P E H+ GV R+LRP V+S++ PL+ DTF+ + +D R + +++ AT ++ VP A L + P + H GVN+RHLG +R+ +T+S+ + +L ++R+ K LR +R+S
Sbjct: 356 ISRLSHDFVKQAEIYGKVIINELNVPDEWKTIKPANVGGVAGGAKYIVQGILYKFCLDPIVSKKPLVWLYGGERPDDDNAMKAAGLELQGLGLIATSQMTQLHVPLMALIDYKGFRLIATSLLPIGPDTLK-YGSNDAGRTIKTGDQVMDHLMHGLGEHLNLRKHLVGKQ---RVPIVGPGDIEGHLGTDGRYYLLDFARLMPPETPLPDEDGHID--GRGVFFRMLRPELVRSFRVPLSSDTFTGWGMYDENRVAYELDVREATDLMINERVPAVAAEISQLYEVETGNCVDFTPAHLQQILEQLNLVARMHARGVNLRHLGRIRDKMTSSKGRKLLLSLALSRAFKSRLRRQMRKS 707
BLAST of mRNA_S-firma_F_contig10325.472.1 vs. uniprot
Match: A0A6B2KXG4_9EUKA (Clu domain-containing protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KXG4_9EUKA) HSP 1 Score: 156 bits (394), Expect = 1.290e-38 Identity = 106/280 (37.86%), Postives = 147/280 (52.50%), Query Frame = 1
Query: 22 LSDDFVAMATRVSKTIIHELRLPPHLKTLMPDVFKGVAGGLKYTNSSALFKLAVDERGIYGSDEIAAKAIGHELKGGLQVAYAGIRGLVVPMSVKVDYLGFSVLATALLPISPKVPPVFGSDDAANTMHSDNPEVAAAMAQLGKSLNLAEHVCGLRAGATLNMAACADIEVKIGSDGVAYVLDTHRLMPPEAPSETPHLP----------PLKNGVLSRLLRPLFVKSWKQPLNPDTFSYFSQHDARRADHAAELKAATRHLVGVLVPEAATAFDGLKAY 831
L+ DF+ +A K II E LP +T+ P G+AGG KY LFK VD GIYGSD +A K+ GHELKG + A I+GL +P+ +DY GF V+A +LLPIS K V+GS D ++ + +V + M GK +N+ EH L+ + + A DIEV G D YVLD R+ PPEA S+ L + +++LLRP FV+ +K PL+ D F F D+ A H E+ AT +L L+ A + + Y
Sbjct: 80 LAKDFINVAHMYGKIIICERFLPVEAQTIPPVQVGGIAGGTKYIKQGILFKFVVDSHGIYGSDAVAMKSGGHELKGLIAYRQADIKGLHLPLMAIIDYRGFRVVAMSLLPISKKTL-VYGSSDGGKNIYKTDEKVNSLMESAGKIINIKEHKVELQ---NIELCAPCDIEVHRGFDDRIYVLDFARVFPPEAHSKNSPLQCYFQSDQETTNIAGVYMTKLLRPEFVRRYKTPLSSDVFMKFGSQDS--AVHDQEVIEATSYLHTKLLDSFAKKLNSISLY 353
BLAST of mRNA_S-firma_F_contig10325.472.1 vs. uniprot
Match: L8GQ60_ACACA (Clu domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GQ60_ACACA) HSP 1 Score: 151 bits (381), Expect = 7.530e-37 Identity = 116/364 (31.87%), Postives = 181/364 (49.73%), Query Frame = 1
Query: 13 LSALSDDFVAMATRVSKTIIHELRLPPHLKTLMPDV-FKGVAGGLKYTNSSALFKLAVDER--------GIYG----SDEIAAKAIGHELKGGLQVAYAGIRGLVVPMSVKVDYLGFSVLATALLPISPKVPPVFGSDDAANTMHSDNPEVAAAMAQLGKSLNLAEHVCGLRAGATLNMAACADIEVKIGSDGVAYVLDTHRLMPPEAPSETPHLPPLKNGVLSRLLRPLFVKSWKQPLNPDTFSYFSQHDARRADHAAELKAATRHLVGVLVPEAATAFDGL------KAYRPQGAGG----------------TMCHRYGVNIRHLGLLRELLTTSRAKLAVLCELVARSLKRLLRAALRQS 999
L L++DFV +K I++EL +P KT+ P G+AGG KY LFK +D + +YG S+E AAKA EL+G ++ + G+ +P+ +D+ GF +LAT+LLP+ P V+GS DA T+H+ +P M ++G LNL +H G + + + DIE DG Y+LD RLMP +AP + GV ++LRP FV+S+ PL+ D F+ +S +D R E+ AAT+ ++ +P A D + Y + + + H G+N RH+G LR+L+ + +LC V+R+LK LR +R++
Sbjct: 417 LLRLANDFVYTCLTYTKVIVNELNMPNDRKTIKPATDIGGLAGGEKYVIQGILFKFCLDPQVSTKGKGVWLYGGNRPSEEKAAKAAALELQGLSLLSSLFLPGIHIPLMALIDFKGFRILATSLLPLGPDTI-VYGSHDAGKTVHASDPVFNKMMDEIGVMLNLKKHTVGKK---KVPIVGPGDIEGHKALDGRYYLLDYARLMPSQAPIPSEDGKWDGRGVFYQMLRPEFVRSYSTPLSSDVFTGWSMYDTEREKSEREVIAATQVMINERIPALAADLDAFDTSVLSEIYARRVSEELDPIRIIQFLNLVNLESRMHCAGINCRHMGRLRQLVHNKAMRSYILCAAVSRALKHKLRNRMRRA 776 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10325.472.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10325.472.1 >prot_S-firma_F_contig10325.472.1 ID=prot_S-firma_F_contig10325.472.1|Name=mRNA_S-firma_F_contig10325.472.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=341bp KFGTLSALSDDFVAMATRVSKTIIHELRLPPHLKTLMPDVFKGVAGGLKYback to top mRNA from alignment at S-firma_F_contig10325:2575..3707+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10325.472.1 ID=mRNA_S-firma_F_contig10325.472.1|Name=mRNA_S-firma_F_contig10325.472.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1133bp|location=Sequence derived from alignment at S-firma_F_contig10325:2575..3707+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10325:2575..3707+ >mRNA_S-firma_F_contig10325.472.1 ID=mRNA_S-firma_F_contig10325.472.1|Name=mRNA_S-firma_F_contig10325.472.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2046bp|location=Sequence derived from alignment at S-firma_F_contig10325:2575..3707+ (Sphaerotrichia firma ET2_F female)back to top |