mRNA_S-firma_F_contig103.439.1 (mRNA) Sphaerotrichia firma ET2_F female
|
Overview
Homology
BLAST of mRNA_S-firma_F_contig103.439.1 vs. uniprot
Match: A0A6H5KQU0_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQU0_9PHAE) HSP 1 Score: 492 bits (1266), Expect = 2.860e-138 Identity = 287/487 (58.93%), Postives = 333/487 (68.38%), Query Frame = 3
Query: 1797 WDEWVAAT-----PDAPSVMVRQVPLDNGKIVWRISPGQVARLLTP-PGGRATNETSTTETGETGWRSVRGPGGEKGWLALPGSDSSGPPGSAPALERFLANRCVVDWFSPEAAGAARLEGSGSEVEDGARAI-SPTSLAAGNFWVPLRQRGPGP-------------SPLSAAHLRGNSDALLLSAVDAGASKNDGR-PLLVTGKWKVGLITDTLTVTTRTSGRTRF----VATSSVAEDSDGKAEGGDQALAPLPVLVDGLVFGFRAVDGLLIVTRALSRPKGAAAATAPPAGSGTA-HMEPVERQAVAWLGRVDEGAEVSFSVVDNGEGVMFSCQEAGSRQRHATVRAKCRDAWGRGRVALGSRSVTAAEDSAIGWVRVVSQAHGATVRSGMSVDADAVVGRIPCGTVVPYDSAVVYHSPGGPDHV-IDPVVRYRCMATVTTPAGWISERGRYLDHPYRICEQFRARPQQPPASVSHVSIARVQ 3176
+DEWV A P+ V VR+ P++ G ++WR+ GQ RLL P TS + TG TGWR +RG GG+ GW+ L D++G P +P LER A R ++DWFSPEAAG R E +E ARA S + G FW+PLR+RG P SP+SAA L GNSDALLLSAVDA DGR LLVTGKW VGL+TD LTVTTRTSG TR VA GKAE + PLPVLVDGLVFGFRAVDGLL+VTRA AG+GT H +PVE+QA+AWLG +DEGAEVSFS+VD+G+ V+FSC+E G+ +R ATVRAKCRD WGRGRVALG RSV E S GWVRV SQAHGATVRSG S+DAD VVGRIPCGTVVP+DSAV+YHSPG PD I+PV+RYRC+AT TTPAGWISERGRY +HPYRICEQ AR QQ PAS+SHVS+ARVQ
Sbjct: 3405 YDEWVVAKAVASGPERRGVRVRKAPVECGNVLWRLPSGQAGRLLPPLXXXXXXXXTSESSTGGTGWRRIRGAGGDTGWVPLTPIDATGSPVPSP-LERVWARRFILDWFSPEAAGCPRGEEGDNEGGLKARAAASNLDVREGAFWLPLRRRGSAPAADGDNGAAVRSPSPISAARLLGNSDALLLSAVDAKGG--DGRGTLLVTGKWTVGLVTDMLTVTTRTSGCTRLEVPPVALDCSVNSVGGKAE---RTADPLPVLVDGLVFGFRAVDGLLVVTRAFPTA----------AGAGTLQHAQPVEQQALAWLGGLDEGAEVSFSIVDSGQDVVFSCREVGAPRRTATVRAKCRDTWGRGRVALGCRSVMT-ESSTSGWVRVTSQAHGATVRSGRSIDADGVVGRIPCGTVVPFDSAVLYHSPGAPDRGGIEPVIRYRCLATATTPAGWISERGRYANHPYRICEQILARSQQIPASISHVSVARVQ 3874
BLAST of mRNA_S-firma_F_contig103.439.1 vs. uniprot
Match: D7FKJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKJ2_ECTSI) HSP 1 Score: 483 bits (1242), Expect = 2.720e-135 Identity = 281/479 (58.66%), Postives = 329/479 (68.68%), Query Frame = 3
Query: 1788 DAGWDEWVAAT-----PDAPSVMVRQVPLDNGKIVWRISPGQVARLLTP-----PGGRATNETSTTETGETGWRSVRGPGGEKGWLALPGSDSSGPPGSAPALERFLANRCVVDWFSPEAAGAARLEGSGSE--VEDGARAISPTSLAAGNFWVPLRQRGPGPSPLSAAHLRGNSDALLLSAVDAGASKNDGRPLLVTGKWKVGLITDTLTVTTRTSGRTRFVATSSVAEDSDGKAEGG--DQALAPLPVLVDGLVFGFRAVDGLLIVTRALSRPKGAAAATAPPAGSGTAHM-EPVERQAVAWLGRVDEGAEVSFSVVDNGEGVMFSCQEAGSRQRHATVRAKCRDAWGRGRVALGSRSVTAAEDSAIGWVRVVSQAHGATVRSGMSVDADAVVGRIPCGTVVPYDSAVVYHSPGGPDHV-IDPVVRYRCMATVTTPAGWISERGRYLDHPYRICEQFRARPQQPPASVSHVSIARVQ 3176
D +DEWV A P+ V VR+ P++ G ++WR+ GQ ARLL P R T+E+ST G GWR VRG GG+ GWL + D++G P +P LER A R ++DWFSPEAAG R E +E +E A A S G+ +R SP+SAA L GNSDALLLSAVDAG + G LLVTGKW VGL+TD LTVTTRTSG TR + VA D + GG +Q PLPVLVDGLVFGFRAVDGLL+VTRA G GT + VE+QA+AWLG +DEGAEVSFS+VD+G+ V+FSC+E G+ +R ATVR KCRD WGRGRVALG RSV E S GWVRV SQAHGATVRSG S+DAD VVGRIPCGTVVP+DSAV+YHSPG PD V I+PV+RYRC+AT TTPAGWISERGRY +HPYRICEQ ARPQQ PAS+SHVS+ARVQ
Sbjct: 3216 DGRYDEWVVAKAVASGPERRGVRVRKTPVEYGNVLWRLPSGQAARLLPPLPXXXXXXRGTSESST---GGAGWRRVRGAGGDTGWLPITSIDATGSPVPSP-LERVWARRFILDWFSPEAAGWPRGEEGDNEGGLEARAAASSLDVKEGGDDGAAVRSH----SPISAARLLGNSDALLLSAVDAGGGDDRGT-LLVTGKWTVGLVTDMLTVTTRTSGCTR-IEVPPVARDGSASSVGGKAEQTADPLPVLVDGLVFGFRAVDGLLVVTRAFPTAT----------GEGTLQYGQRVEQQALAWLGGLDEGAEVSFSIVDSGQDVVFSCREVGAPRRTATVRTKCRDTWGRGRVALGCRSVKT-ESSTSGWVRVTSQAHGATVRSGRSIDADGVVGRIPCGTVVPFDSAVLYHSPGAPDRVGIEPVIRYRCLATATTPAGWISERGRYANHPYRICEQILARPQQTPASISHVSVARVQ 3673
BLAST of mRNA_S-firma_F_contig103.439.1 vs. uniprot
Match: D8LDQ2_ECTSI (ATP binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDQ2_ECTSI) HSP 1 Score: 393 bits (1009), Expect = 1.680e-117 Identity = 231/481 (48.02%), Postives = 296/481 (61.54%), Query Frame = 3
Query: 294 VEKTLATIGHDDDLLKNLLDLKTLSENIQDVLQRCQPMQ-----SSSALRKAAHNASRVFKAADNRNDLKKYSTKLADMERGIIGMMALVSITKQKVYHEEDGQQMRRIEDKIGLALKISEDTRSHPAVKLAQRQLKGNVIYNELTELDHVLGSGSFGVVKAGTYYGRPVAIKKALEKLYGPEDRENFRREASTHFILKHDRIVRVIAFSSGDDSHVPCLVMERMEHTLRYFLGVQSAELDLHGKLAYIIDVCEGLRYLHHLNVIHRDINSYNILLDGSGAKVSDFGLS-HVCSTL-RSTRNGSFLDEKAMGTNFWMAPEVFDRKESSFDSDIFSLHVVMWEIIEHRPGGKKHDPAIGYELLSAPHRTLELTGGRDAGHPAGPRLHKLVHRCGMLDRSRRPEISDVLREAKLIFDSLSGPGKGDVCGAGTASAQPENLSRSGSLPLSEERRRIQENGAFDAQESPWESWKELDSSRVEVES 1715
+ + + T ++ + K LL++KTL E + D++Q C P + +SS LR AA A RV+ + N LK+YS KL ++ + M +V+ QQ R+E +++D + P++KL +R +KGNV+ EL ELD LG GSFGVV AG YYG+PVAIK+AL ++ EDRE FRREASTHF +HDRIV+VIAF +G S PCLVMERM+ TL +FLG+ A LDL G L Y+ID+CEGL+YLH V+HRDI S+NILL GAKVSDFGL+ H CST+ R T N F+DEKA GT FWMAPE+ ESSFDSD+FSLHVV+WEIIE+R GG AIG L L + G D PA RLHKL+ CG+L+R RP+I +VL EA I+DSL G + A T G L SE RRR QE D+ +PW SWK+ D V E+
Sbjct: 1 MREAVPTFENNAFIRKILLEVKTLFERMDDLVQLCLPQEQQHDETSSTLRNAARTAKRVYFSEQNLKILKEYSDKLDSIKLDLSVRMQVVA-----------KQQANRME------AFLTQDKGTDPSLKLMKRLMKGNVVDEELEELDETLGCGSFGVVMAGRYYGKPVAIKRALSSVFSAEDRERFRREASTHFAQRHDRIVQVIAFRTGGGSRPPCLVMERMDRTLFHFLGISPAPLDLSGSLPYMIDICEGLKYLHQGGVLHRDIKSHNILLRNGGAKVSDFGLATHGCSTMGRKTGNNQFIDEKA-GTKFWMAPEILSWGESSFDSDVFSLHVVLWEIIENRQGGT--GDAIGDVLRRNRLAKLPIEGEGDERDPATMRLHKLIRTCGLLERKDRPKIGEVLAEATSIYDSLPRSGGAEEPSAATTYPLQGRDEEEGHLRPSESRRRAQEAENSDSLRAPWGSWKDFDPCGVGAEN 461
BLAST of mRNA_S-firma_F_contig103.439.1 vs. uniprot
Match: D8LRE9_ECTSI (Transmembrane receptor kinase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE9_ECTSI) HSP 1 Score: 362 bits (929), Expect = 5.040e-102 Identity = 212/486 (43.62%), Postives = 284/486 (58.44%), Query Frame = 3
Query: 3939 ASANAVRDSCLDGLDIASAMMDDAEELARNCPVPSVCEAATVMPFLIKLVSEGRGNVGGMEEGLARCRSIITLLHNAAKVFAKDSSSKGAAPRVL-DNVRDVILDLVDLMKIFQSQQKLLKVLTSSLFRRRQEEANAAIDSAVIRHF-------------------------------------------STEIPEDEVLISADLLGSGAFSAVYIGDYRGRNVACKVVQIKHGPRGMKDIDADEP-----SAMTESEKRQHKQLRREMDAMASLRSPHIVHVYGRTTSLHDRLVLVMELLVGGDLQTMLKSSNQPLPAEQSRHIIGDVCAGMDFLHGENTVHGDLTSAKVLLDGAGRAKIGDFISTTWAE---VSGLAA---------ARSILWVAPEVLEGGATTYASDVYSFGVVVWEVITTEVPWATKTNPRDVVRAVLQGERPEFPAHADAGSVDVARLCWAHDVHTRPSFRELMEHMKIK 5213
AS+ A R + + A+M A+ELA C VP V EA T++ L+ LV + R + G + L +CRSI+ +L+ A KV ++ G R L D+V + I DLV+L+K +QS+ KL KVL S+LF+RRQ+E +A +D A++R EIPE+ V I+ ++LG G F VY+ DY GRN A KV+ I + + DA E S T+ E Q + RE+DAM LRSPH V+VYG TSL DR+VLVMELL GGDL+T+L++ QPLP EQSR IIGD+CAGM FLH ++TVHGDL SA VLLDG+GRAKIGDF ++ W++ +GLA S+ W APEVLE G +T ASDVYSFG+VVWEV++ E+PWA K+ PR+++ AVL G RP F A V++A+ CW + R +F +ME M K
Sbjct: 462 ASSTAGRRGSFGDVGVGQAVMVAAQELAHRCQVPGVSEAVTLVSILVNLVKDSRDDSSGGDSRLRQCRSIVMVLNRADKVAGNGENTTGKVARTLIDDVHEAIFDLVELIKTYQSKNKLSKVLMSTLFKRRQDELDAVVDRAIVRLQLGLQVQVGQDVKAGMDLYKGSIAEVQSESLADARSTRRRRKLDQVEIPEEHVTITNEVLGRGGFGEVYLADYNGRNAAAKVLLIARDLGTLSENDALESPLAGRSNTTKREDSQRRAFLRELDAMIRLRSPHTVNVYGAVTSLPDRMVLVMELLSGGDLRTLLRNYQQPLPEEQSRRIIGDICAGMAFLHSKDTVHGDLKSANVLLDGSGRAKIGDFGTSRWSQHTNSTGLATYTTRSSPGTQMSLAWSAPEVLESGGSTRASDVYSFGIVVWEVVSGELPWANKSRPREILSAVLMGVRPSFNDIAPTDMVEIAKACWEGEPDARTTFDAVMEGMMSK 947
BLAST of mRNA_S-firma_F_contig103.439.1 vs. uniprot
Match: D7G7X7_ECTSI (ATP binding / amino acid binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X7_ECTSI) HSP 1 Score: 356 bits (914), Expect = 4.950e-99 Identity = 219/514 (42.61%), Postives = 285/514 (55.45%), Query Frame = 3
Query: 3930 VGGA---SANAVRDSCLDGLDIASAMMDDAEELARNCPVPSVCEAATVMPFLIKLVSEGRGNVGGMEEGLARCRSIITLLHNAAKVFAKDSSSKGAAPRVL-DNVRDVILDLVDLMKIFQSQQKLLKVLTSSLFRRRQEEANAAIDSAVIR----------HF-----------------------------------------------------------STEIPEDEVLISADLLGSGAFSAVYIGDYRGRNVACKVVQIKHGPRGMKDIDA-DEPSAMTESEKRQHKQLRREMDAMASLRSPHIVHVYGRTTSLHDRLVLVMELLVGGDLQTMLKSSNQPLPAEQSRHIIGDVCAGMDFLHGENTVHGDLTSAKVLLDGAGRAKIGDFISTTWAE---VSGLAA---------ARSILWVAPEVLEGGATTYASDVYSFGVVVWEVITTEVPWATKTNPRDVVRAVLQGERPEFPAHADAGSVDVARLCWAHDVHTRPSFRELMEHMKIK 5213
VGGA S+ A R + + L + A++ A+ELAR+C VP + EAA V+ + L ++ R N + L +CRSI+ L A KV K + G RVL ++V D I DLV+L+K FQS+ KL K+ S+LF+RR++E +A +D A+ R H EIPED++ I+ DLLG G F VY+ DY G N A KV+ I H D+ A DE E+ RQ K RE++AM LRSP+ V+VYG TSL DR+VLVMELL GDL T+L+ S PLP E+SR IIGD+CAGM FLHG+NTVHGDL SA VLLDG GRAKIGDF ++ W++ +GLA S+ W APEVLE G +TY SDVYSFG+VVWEV++ E+PWA KT PRD++ AVL G RP F A A VD+A+ CW + R +F ++E M K
Sbjct: 567 VGGARETSSAADRQNSAEDLGLGHAVLGAAQELARHCQVPGISEAAAVLCIMANLFTDNRENDRENDSRLRQCRSIVMALKRAEKVVGKGGDTTGEVARVLIEDVHDAIFDLVELIKTFQSKNKLSKLFLSTLFKRRKDELDAVVDRAITRLQLGLQLQMGHDMGSVKDSMKSXXXXXXXXXXXXXXXXXXXXXXXXXSNAESTTSESVAEARSIRRKRKLDQVEIPEDQLFITTDLLGKGGFGEVYLADYNGHNAAAKVLYIAH------DLGALDENQKQRET--RQRKGFLRELEAMIRLRSPNTVNVYGAVTSLSDRMVLVMELLPNGDLLTLLRRSTNPLPEEKSRQIIGDICAGMAFLHGKNTVHGDLKSANVLLDGGGRAKIGDFGTSRWSQHTNSTGLATYTTKANQSTQMSLAWSAPEVLESGGSTYKSDVYSFGIVVWEVLSRELPWANKTRPRDILSAVLMGIRPSFHVDAPADIVDIAKACWGGEPEERTTFSAILEGMDAK 1072
BLAST of mRNA_S-firma_F_contig103.439.1 vs. uniprot
Match: A0A6H5KF25_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF25_9PHAE) HSP 1 Score: 353 bits (906), Expect = 1.050e-97 Identity = 216/512 (42.19%), Postives = 279/512 (54.49%), Query Frame = 3
Query: 3957 RDSCLDGLDIASAMMDDAEELARNCPVPSVCEAATVMPFLIKLVSEGRGNVGGMEEGLARCRSIITLLHNAAKVFAKDSSSKGAAPRVL-DNVRDVILDLVDLMKIFQSQQKLLKVLTSSLFRRRQEEANAAIDSAVIR------HF-------------------------------------------------------------------------STEIPEDEVLISADLLGSGAFSAVYIGDYRGRNVACKVVQIKHGPRGMKDIDA-DEPSAMTESEKRQHKQLRREMDAMASLRSPHIVHVYGRTTSLHDRLVLVMELLVGGDLQTMLKSSNQPLPAEQSRHIIGDVCAGMDFLHGENTVHGDLTSAKVLLDGAGRAKIGDFISTTWAE---VSGLAA---------ARSILWVAPEVLEGGATTYASDVYSFGVVVWEVITTEVPWATKTNPRDVVRAVLQGERPEFPAHADAGSVDVARLCWAHDVHTRPSFRELMEHMKIK 5213
R + D L + A++ A+ELA +C VP + EAA V+ + L ++ R N + L +CRSI+ L A KV K S + G RVL ++V D I DLV+L+K FQS+ KL K+L S+LF+RRQ+E +A +D A+ R H EIPED++ I+ DLLG G F VY+ DY G N A KV+ I H D+ A DE E+ RQ K RE++AM LRSP+ V+VYG TSL DR+VLVMELL GDL T+L+ S +PLP E+SR IIGD+CAGM FLHG+NTVHGDL SA VLLDG GRAKIGDF ++ W++ +GLA S+ W APEVLE G +TY SDVYSFG+VVWEV + E+PWA KT PRD++ AVL G RP F A A VD+A+ CW + R +F ++E M K
Sbjct: 594 RPNSSDDLGLGHAVLGAAQELAHHCQVPGISEAAGVLCIMANLFTDNRENDRANDSRLKQCRSIVMALKRAEKVVGKGSDTTGEVARVLIEDVHDAIFDLVELIKTFQSKNKLSKLLLSTLFKRRQDELDAVVDRAITRLQLQMGHDMGSVKDSMKSMENXXXXXXXXXXXXXXGMNLYRQASQTISVSVPGCVEGSNAESTTSESVAEARSIRRQRKLDQVEIPEDQLFITTDLLGKGGFGEVYLADYNGHNAAAKVLYIAH------DLGALDENQKQRET--RQRKGFLRELEAMIRLRSPNTVNVYGAVTSLSDRMVLVMELLPNGDLLTLLRRSTKPLPEEKSRQIIGDICAGMAFLHGKNTVHGDLKSANVLLDGGGRAKIGDFGTSRWSQHTNSTGLATYTTKANQSTQMSLAWSAPEVLESGGSTYKSDVYSFGIVVWEVFSRELPWANKTRPRDILSAVLMGIRPSFHVDAPADIVDIAKACWGGEPEERTTFSAILEGMDAK 1097
BLAST of mRNA_S-firma_F_contig103.439.1 vs. uniprot
Match: D8LHV1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV1_ECTSI) HSP 1 Score: 347 bits (891), Expect = 5.820e-96 Identity = 203/460 (44.13%), Postives = 270/460 (58.70%), Query Frame = 3
Query: 4008 AEELARNCPVPSVCEAATVMPFLIKLVSEGRGNVGGMEEGLARCRSIITLLHNAAKVFAKDSSSKGAAPRVL-DNVRDVILDLVDLMKIFQSQQKLLKVLTSSLFRRRQEEANAAIDSAVIR-----HFST-----------------------------------------EIPEDEVLISADLLGSGAFSAVYIGDYRGRNVACKVVQIKHGPRGMKDIDADEPSAMTESEKRQHKQLRREMDAMASLRSPHIVHVYGRTTSLHDRLVLVMELLVGGDLQTMLKSSNQPLPAEQSRHIIGDVCAGMDFLHGENTVHGDLTSAKVLLDGAGRAKIGDFISTTWAE---VSGLAA--------ARSILWVAPEVLEGGATTYASDVYSFGVVVWEVITTEVPWATKTNPRDVVRAVLQGERPEFPAHADAGSVDVARLCWAHDVHTRPSFRELMEHMKIK 5213
A+ELA +C VP V E AT++ L+ LV++ N GG + L +CRSII LL+ A KV ++ G R+L ++V + I DLV+L+K +QS+ KL KVL S+LF+RRQ+E +A +D A++R H EIPE + I+ ++LG G F VY+ DY GRN A K Q +S++R RE+DAM LRSPH V+VYG TS D +VLVMELL GGDL+T+L++S QPLP EQSR IIGD+CAGM FLH ++TVHGDL SA VLLDG+GRAKIGDF ++ W++ +GLA S+ W APEVLE G +TYASDVYSFG+VVWEV++ E+PWA KT PR+++ AVL G RP F A A V++A+ CW + R +F ++E M K
Sbjct: 648 AQELAHHCQVPGVSEVATLVSLLVNLVTDSCDNNGGSDGRLRQCRSIIILLNRADKVAGNGENTTGEVTRMLIEDVHEAIFDLVELIKTYQSKNKLSKVLMSTLFKRRQDELDAVVDRAMVRLQLGLHMQVGQDVSAIKTGMDQYKGSIAEAQSESLADARRTRRQRKLDQVEIPEGHLTITNEVLGKGGFGEVYLADYNGRNAAAKHHQ-------------------NDSQRRA---FLRELDAMIRLRSPHTVNVYGAVTSQPDHMVLVMELLSGGDLRTLLRTSEQPLPQEQSRRIIGDICAGMAFLHEKDTVHGDLKSANVLLDGSGRAKIGDFGTSRWSQHTHSTGLATYTTTKPSTQMSLAWSAPEVLESGGSTYASDVYSFGIVVWEVVSGELPWANKTRPREILSAVLMGARPSFRHDAPADIVEIAKACWVGEPRARTTFDAVLEGMDSK 1085
BLAST of mRNA_S-firma_F_contig103.439.1 vs. uniprot
Match: A0A6H5KA37_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA37_9PHAE) HSP 1 Score: 346 bits (887), Expect = 1.010e-95 Identity = 205/481 (42.62%), Postives = 275/481 (57.17%), Query Frame = 3
Query: 3975 GLDIASAMMDDAEELARNCPVPSVCEAATVMPFLIKLVSEGRGNVGGMEEGLARCRSIITLLHNAAKVFAKDSSSKGAAPRVL-DNVRDVILDLVDLMKIFQSQQKLLKVLTSSLFRRRQEEANAAIDSAVIR-HFS------------------------------------------TEIPEDEVLISADLLGSGAFSAVYIGDYRGRNVACKVVQIKHGPRGMKDI----DADEPSAMTESEKRQHKQLRREMDAMASLRSPHIVHVYGRTTSLHDRLVLVMELLVGGDLQTMLKSSNQPLPAEQSRHIIGDVCAGMDFLHGENTVHGDLTSAKVLLDGAGRAK------IGDFISTTWAE----VSGLAAAR---------SILWVAPEVLEGGATTYASDVYSFGVVVWEVITTEVPWATKTNPRDV-VRAVLQGERPEFPAHADAGSVDVARLCWAHDVHTRPSFRELMEHMKIK 5213
G++ A++ AEELA +C +P V EAATV+ L+ LV++ R ++ + + RCRSI+ +L AAKV + R L + V D + DLVDL+K +Q++ KL KVL S+LF+RRQEE +A +D A++ H EIP+D V+I+ ++LG G F VY+ DY G N A KV I HG D+ + +P A+ E K Q K RE+DAM LR PH V+VYG TSL DRL+LV+ELL GGDL+TMLK+S QPLP EQSR II D+CAGM FLH ++TVHGDL SA +LLD GRAK IGDF ++ W + +GLA S W APEVLE T+ ASDVYSFG+VVWEV++ ++PWA + PRD+ +R V+ G+RP PA A ++ CWA + RP+F+ L K+K
Sbjct: 568 GVEYGQAVLAAAEELAHHCQIPGVSEAATVVSILVHLVTDSRDSMSRGDGAVKRCRSIVMMLERAAKVLGNGGDTNSEVERALIEEVHDAVSDLVDLIKTYQNKNKLSKVLMSTLFKRRQEELDAVVDKAILHLHLGLQVQVGQDVAEGLDLHKRSTAEAKAESLAEARRARRQRKLDQVEIPDDHVVITEEMLGRGGFGEVYLADYNGHNAAAKVQYIIHGFGRRDDVLNGPKSGQPDAVRE--KVQRKAFLRELDAMIRLRHPHTVNVYGAITSLPDRLILVLELLPGGDLRTMLKNSEQPLPEEQSRQIIKDICAGMAFLHSKSTVHGDLKSANILLDARGRAKARWACGIGDFGTSRWTQNTERSTGLATYTTNPGPSTHISFAWTAPEVLEKETTSKASDVYSFGIVVWEVLSRQLPWADQAQPRDIYLRVVIHGDRPAIPADAPVDIAEILLGCWAQEPTERPTFQALSGGEKVK 1046
BLAST of mRNA_S-firma_F_contig103.439.1 vs. uniprot
Match: D7FN19_ECTSI (Putative CTR1-like protein kinase/ leucine rich repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN19_ECTSI) HSP 1 Score: 343 bits (879), Expect = 6.350e-94 Identity = 200/471 (42.46%), Postives = 267/471 (56.69%), Query Frame = 3
Query: 3975 GLDIASAMMDDAEELARNCPVPSVCEAATVMPFLIKLVSEGRGNVGGMEEGLARCRSIITLLHNAAKVFAKDSSSKGAAPR-VLDNVRDVILDLVDLMKIFQSQQKLLKVLTSSLFRRRQEEANAAIDSAVIR-HFS------------------------------------------TEIPEDEVLISADLLGSGAFSAVYIGDYRGRNVACKVVQIKHGPRGMKDIDADEPSAMTESEKRQHKQLRREMDAMASLRSPHIVHVYGRTTSLHDRLVLVMELLVGGDLQTMLKSSNQPLPAEQSRHIIGDVCAGMDFLHGENTVHGDLTSAKVLLDGAGRAKIGDFISTTWAE----VSGLAAAR---------SILWVAPEVLEGGATTYASDVYSFGVVVWEVITTEVPWATKTNPRDV-VRAVLQGERPEFPAHADAGSVDVARLCWAHDVHTRPSFRELMEHMKIK 5213
G++ A++ AEELA +C +P V EAATV+ L+ LV++ R ++ + + RCRSI+ +L AAKV K + R +L+ V D + DLVDL+K +Q++ KL KVL S+LF+RRQEE +A +D A++ H EIP+D V+I+ ++LG G F VY+ DY G N A KV +K Q K RE+DAM LR PH V+VYG TSL DRL+LV+ELL GGDL+TMLK+S QPLP EQSR II D+CAGM FLH ++TVHGDL SA +LLD GRAKIGDF ++ W + +GLA S W APEVLE T+ ASDVYSFG+VVWEV++ ++PWA + PRD+ +R V+ G+RP PA A D+ CWA + RP+F+ L K+K
Sbjct: 711 GVEYGQAVLAAAEELAHHCQIPGVSEAATVVSILVHLVTDSRDSLSRGDLAVKRCRSIVMMLERAAKVLGKGGDTNSEVERALLEEVHDAVSDLVDLIKTYQNKNKLSKVLMSTLFKRRQEELDAVVDKAILHLHLGLQVQVGQDVAEGLDLHKRSTAEAKAESLAEARRARRQRKLDQVEIPDDHVVITEEMLGRGGFGEVYLADYNGHNAAAKV-----------------------GKKIQRKAFLRELDAMIRLRHPHTVNVYGAITSLPDRLILVLELLPGGDLRTMLKNSEQPLPEEQSRQIIKDICAGMAFLHSKSTVHGDLKSANILLDARGRAKIGDFGTSRWTQNTERSTGLATYTTNPGPSTHISFAWTAPEVLEKQTTSKASDVYSFGIVVWEVLSRQLPWADQAQPRDIYLRVVIHGDRPALPADAPVDIADMLLGCWAQEPTERPTFQALSGGEKVK 1158
BLAST of mRNA_S-firma_F_contig103.439.1 vs. uniprot
Match: A0A6H5KY76_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY76_9PHAE) HSP 1 Score: 341 bits (874), Expect = 5.270e-93 Identity = 209/476 (43.91%), Postives = 272/476 (57.14%), Query Frame = 3
Query: 3975 GLDIASAMMDDAEELARNCPVPSVCEAATVMPFLIKLVSEGRGNVGGMEEGLARCRSIITLLHNAAKVFAKDSSSKGAAPR-VLDNVRDVILDLVDLMKIFQSQQKLLKVLTSSLFRRRQEEANAAIDSAVIR-HFS---------------------------------------------TEIPEDEVLISAD-LLGSGAFSAVYIGDYRGRNVACKVVQIKHG---PRGMKDIDADEPSAMT--ESEKRQHKQLRREMDAMASLRSPHIVHVYGRTTSLHDRLVLVMELLVGGDLQTMLKSSNQPLPAEQSRHIIGDVCAGMDFLHGENTVHGDLTSAKVLLDGAGRAKIGDFISTTWA---EVSGLAA--------ARSILWVAPEVLEGGATTYASDVYSFGVVVWEVITTEVPWATKTNPRDV-VRAVLQGERPEFPAHADAGSVDVARLCWAHDVHTRPSFRELMEHMK 5207
G+ + A+M AE LA +C +P V EAA+V+ L+ LVS+ R G + L +CRSI+ +L A+KV + + A R ++D V I DLV+L+K +QS +L KVL S+ F+ RQ + AAID A+ R F EIPED+V+I +D LLG G F V++ +Y RN A KV+ I H P G +D+ + E EK Q K RE++AM LRSPH V VYG TS DRLVLVMELL GGDL+ +LK+S+QPLP EQ R IIGD+CAGM FLH + TVHGDL SA VLLDGAGRAKIGDF ++ W+ +GLA S+ W APEVL +TYASDVYSFG+V WEV++ E+PWA+ +PR+V +R VL RPE PA A A + R CWA D RP+ +ME ++
Sbjct: 729 GIGLREAVMQAAENLAYHCQIPGVSEAASVVSTLVMLVSDSRDIKSGGDSNLRQCRSIVRILERASKVAGRGGETTTAEQRDLIDEVHYAIEDLVELIKTYQSMNRLSKVLMSTSFKWRQNDLEAAIDRALSRLQFGLQVQVGDDVRGVKEGIDVVQGSIVEANAASLAKARSARRQRKLDQVEIPEDQVMIFSDELLGKGGFGEVFLAEYNRRNAAAKVLHIAHDLGKPGGQEDLLEARVDGQSNPEREKSQRKAFLRELEAMIRLRSPHTVGVYGAITSRPDRLVLVMELLAGGDLRRLLKNSDQPLPEEQCRRIIGDICAGMHFLHSKETVHGDLKSANVLLDGAGRAKIGDFGTSRWSYHTNSTGLATYTKAGQNTQMSLAWSAPEVLGASGSTYASDVYSFGIVAWEVLSRELPWASVVHPREVYIRVVLNELRPEIPADAPADIATIMRACWAGDPEARPTSSAIMERIE 1204 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig103.439.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig103.439.1 >prot_S-firma_F_contig103.439.1 ID=prot_S-firma_F_contig103.439.1|Name=mRNA_S-firma_F_contig103.439.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=1685bp MAELIVVETLAAARRVIEMVETAQECEKECGTISSRVLSTITTVEKTLATback to top mRNA from alignment at S-firma_F_contig103:7758..22652+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig103.439.1 ID=mRNA_S-firma_F_contig103.439.1|Name=mRNA_S-firma_F_contig103.439.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=14895bp|location=Sequence derived from alignment at S-firma_F_contig103:7758..22652+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig103:7758..22652+ >mRNA_S-firma_F_contig103.439.1 ID=mRNA_S-firma_F_contig103.439.1|Name=mRNA_S-firma_F_contig103.439.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=10110bp|location=Sequence derived from alignment at S-firma_F_contig103:7758..22652+ (Sphaerotrichia firma ET2_F female)back to top |