prot_S-firma_F_contig1020.318.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1020.318.1
Unique Nameprot_S-firma_F_contig1020.318.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length682
Homology
BLAST of mRNA_S-firma_F_contig1020.318.1 vs. uniprot
Match: D8LJK6_ECTSI (CID domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK6_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 2.300e-92
Identity = 161/207 (77.78%), Postives = 168/207 (81.16%), Query Frame = 0
Query:   76 MANDHWDGAASMHKALKNLATSSRPISASRVKTAASTALDNVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRMSETVETLRNVPEGDKPPVFRIFREWHEKGMFQGLESFASDGAAAXXXXXXXPAPASYHEQSPAPQQAVSSS--------SPALMPLPPDAGVIHLGLKAGDTYGSAYPPHS 274
            M ND WDGAASMHKALK LATSSRPISASRVKTAA+ ALDNVKEYKRVVHAIERYIRKAQP HRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRMSETVE LRNVP+GDKPPVFR+ REWHEKGMF+GLE+FAS GAA XXXXXXX                            +PALMPLPP  GVIHLGLKAGDTYGSAYPPH+
Sbjct:    1 MTNDDWDGAASMHKALKVLATSSRPISASRVKTAAARALDNVKEYKRVVHAIERYIRKAQPQHRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRMSETVENLRNVPDGDKPPVFRVIREWHEKGMFKGLEAFASTGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPALMPLPPPTGVIHLGLKAGDTYGSAYPPHA 207          
BLAST of mRNA_S-firma_F_contig1020.318.1 vs. uniprot
Match: A0A6H5JF85_9PHAE (CID domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF85_9PHAE)

HSP 1 Score: 293 bits (749), Expect = 6.590e-83
Identity = 159/204 (77.94%), Postives = 167/204 (81.86%), Query Frame = 0
Query:   76 MANDHWDGAASMHKALKNLATSSRPISASRVKTAASTALDNVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRMSETVETLRNVPEGDKPPVFRIFREWHEKGMFQGLESFASDGAAAXXXXXXXPAPASYHEQSPAPQQAVSSS-----SPALMPLPPDAGVIHLGLKAGDTYGSAYPPHS 274
            MAND WDGAA M+KALK LATSSRPISASRVKTAA+ ALDNVKEYKRVVHAIERYIRKAQP HRIGGCFVIDSVCRQA SKWGHKDVFTPRFAQRMSETVE LRNVP+GDKPPVFR+ REWHEKGMF+GLE+FAS GAA XXXXXXX                         +PALMPLPP  GVIHLGLKAGDTYGSAYPPH+
Sbjct:    1 MANDDWDGAAPMNKALKVLATSSRPISASRVKTAAARALDNVKEYKRVVHAIERYIRKAQPQHRIGGCFVIDSVCRQAHSKWGHKDVFTPRFAQRMSETVENLRNVPDGDKPPVFRVIREWHEKGMFKGLEAFASTGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPALMPLPPPTGVIHLGLKAGDTYGSAYPPHA 204          
BLAST of mRNA_S-firma_F_contig1020.318.1 vs. uniprot
Match: A0A835ZBE3_9STRA (CID domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBE3_9STRA)

HSP 1 Score: 114 bits (286), Expect = 2.480e-23
Identity = 63/125 (50.40%), Postives = 84/125 (67.20%), Query Frame = 0
Query:   84 AASMHKALKNLATSSRPISASRVKTAASTALDNVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQA--QSKWGHKD---VFTPRFAQRM-SETVETLRNVPEGDKPPVFRIFREWHEKGMF 202
            AA+++KAL  LATS RPISA+RVK AA  A   VKEYKRVVHA+E++++ A+P  R+G  ++IDS+C+ +      G KD   VF  RF QRM  ET+  LR VP  D+P V R+   WH +G+F
Sbjct:    3 AAALNKALAYLATSKRPISAARVKEAAKEAQAQVKEYKRVVHAVEKFLKHAKPQQRLGVVYLIDSLCKSSGRPPSAGAKDSGLVFAARFGQRMRGETLPKLREVPSSDRPAVERVVANWHTRGLF 127          
BLAST of mRNA_S-firma_F_contig1020.318.1 vs. uniprot
Match: A0A1V9YU27_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YU27_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.640e-16
Identity = 50/139 (35.97%), Postives = 87/139 (62.59%), Query Frame = 0
Query:   76 MANDHWDGAASMHKALKNLATSSRPISASRVKTAASTALDNVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWG-HKDVFTPRFAQRMSETVETLRNVPEGDKPPVFRIFREWHEKGMFQGLESFASDGA 213
            MA    +G A +  AL  +A S++  SA+++K A S  +  VK+YKRVVHA+E  + K++  HR+G  ++ID++ R +QSK+G  KD+F+PRF   +  T+ +++ VP  ++  V+R+ ++W  + +F   E   + GA
Sbjct:    1 MATTWKEGEAELKAALAPIA-SAKGTSATKIKVACSLCMKLVKDYKRVVHAVETVMWKSEVEHRLGFLYLIDAITRASQSKYGPEKDLFSPRFGIHLRHTISSVKQVPAENQHHVYRVIQDWIARSVFTTEEITKAGGA 138          
BLAST of mRNA_S-firma_F_contig1020.318.1 vs. uniprot
Match: A0A1V9ZH29_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZH29_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 2.140e-16
Identity = 53/139 (38.13%), Postives = 89/139 (64.03%), Query Frame = 0
Query:   76 MANDHWDGAASMHKALKNLATSSRPISASRVKTAASTALDNVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWG-HKDVFTPRFAQRMSETVETLRNVPEGDKPPVFRIFREWHEKGMFQGLESFASDGA 213
            MA    +G A + +AL  +AT  +  SA++VKTA++  L  VK+YKRVVHA+E  + K++  HR+G  ++ID++ RQ+Q+K+G  KD+F PRF+Q +S T+ +L+ +P+  +    RI  +W  + +F   +   + GA
Sbjct:    1 MALSWKEGEADLKEALAPIATP-KGTSATKVKTASALCLRMVKDYKRVVHAVETLMWKSE--HRLGFLYLIDAIIRQSQAKFGSEKDLFAPRFSQHLSHTISSLKQLPDDGQEHAHRIVYDWVTRRVFTKEQIIKAGGA 136          
BLAST of mRNA_S-firma_F_contig1020.318.1 vs. uniprot
Match: A0A397BZL8_9STRA (CID domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BZL8_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 2.280e-16
Identity = 50/134 (37.31%), Postives = 77/134 (57.46%), Query Frame = 0
Query:   81 WDGAASMHKALKNLATSSRPISASRVKTAASTALDNVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGH-KDVFTPRFAQRMSETVETLRNVPEGDKPPVFRIFREWHEKGMFQGLESFASDGA 213
            W G   +  AL +LAT+ + +SA+R+K A    +   KEYKRVVHA+E  + KA   HR+   ++ID++ R +Q+K+G  KD F  RF   M  T+   R VP+  K  V ++  EW ++G++   E   + GA
Sbjct:    4 WKGEEELKGALSSLATA-KGVSANRIKGATVACMKWSKEYKRVVHAVENVMWKADVEHRLAYMYLIDALIRASQTKFGDDKDHFAKRFGLHMHHTLSACRKVPDDHKSNVKKVVVEWKKRGVYTAQEIEEAGGA 136          
BLAST of mRNA_S-firma_F_contig1020.318.1 vs. uniprot
Match: A0A397C522_9STRA (CID domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C522_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 8.530e-16
Identity = 50/134 (37.31%), Postives = 77/134 (57.46%), Query Frame = 0
Query:   81 WDGAASMHKALKNLATSSRPISASRVKTAASTALDNVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGH-KDVFTPRFAQRMSETVETLRNVPEGDKPPVFRIFREWHEKGMFQGLESFASDGA 213
            W G   +  AL +LAT+ + +SA+R+K A    +   KEYKRVVHA+E  + KA   HR+   ++ID++ R +Q+K+G  KD F  RF   M  T+   R VP+  K  V ++  EW ++G++   E   + GA
Sbjct:    4 WKGEEELKGALSSLATA-KGVSANRIKGATVACMKWSKEYKRVVHAVENVMWKADVEHRLAYMYLIDALIRASQTKFGDDKDHFAKRFGLHMHHTLSACRKVPDDHKSNVKKVVVEWKKRGVYTAQEIEEAGGA 136          
BLAST of mRNA_S-firma_F_contig1020.318.1 vs. uniprot
Match: A0A6G0UTM1_9BILA (Uncharacterized protein n=1 Tax=Halicephalobus sp. NKZ332 TaxID=2598192 RepID=A0A6G0UTM1_9BILA)

HSP 1 Score: 92.4 bits (228), Expect = 1.030e-15
Identity = 40/117 (34.19%), Postives = 68/117 (58.12%), Query Frame = 0
Query:   87 MHKALKNLATSSRPISASRVKTAASTALDNVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRMSETVETLRNVPEGDKPPVFRIFREWHEKGMFQ 203
            + + L  L  S  P    ++      A+ +V+ +K VVHA+E++I K +P H++ G ++IDS+ RQ+Q K+ HKDVF PRF+  + +T+E     P  D+P + R+   W    +F+
Sbjct:    9 LEELLTGLTESKAPPGKQQIMDVTKQAMASVRHFKHVVHAVEKFIVKCKPTHKLHGFYMIDSIIRQSQKKFKHKDVFKPRFSANLKQTLENALRCPPKDRPKIVRVINLWRANHIFE 125          
BLAST of mRNA_S-firma_F_contig1020.318.1 vs. uniprot
Match: A0A6G0WM24_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WM24_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 3.130e-15
Identity = 52/140 (37.14%), Postives = 80/140 (57.14%), Query Frame = 0
Query:   81 WDGAASMHKALKNLATSSRPISASRVKTAASTALDNVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGH-KDVFTPRFAQRMSETVETLRNVPEGDKPPVFRIFREWHEKGMFQ-------GLESFASDG 212
            W G   + +ALK+LAT+ + ISA+R+K A +  +   KEYKRVVHA+E  + KA   HR+   ++ID++ R +Q+K+G  KD F  RF   ++ T+   R VP+  K  V R+  EW ++ ++        G   F  DG
Sbjct:    4 WKGEEEVGEALKSLATA-KGISATRIKNACTVLMKWSKEYKRVVHAVEHVLWKADAEHRLAYLYLIDALIRASQAKYGEDKDTFGKRFGIHLNHTLAACRKVPDDAKGNVKRVVAEWIKRNVYTTQDIEKAGAMDFLGDG 142          
BLAST of mRNA_S-firma_F_contig1020.318.1 vs. uniprot
Match: A0A418FAE5_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418FAE5_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 4.500e-15
Identity = 50/134 (37.31%), Postives = 77/134 (57.46%), Query Frame = 0
Query:   81 WDGAASMHKALKNLATSSRPISASRVKTAASTALDNVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVCRQAQSKWGH-KDVFTPRFAQRMSETVETLRNVPEGDKPPVFRIFREWHEKGMFQGLESFASDGA 213
            W G   +  AL +LAT+ + +SA+R+K A    +   KEYKRVVHA+E  + KA   HR+   ++ID++ R +Q+K+G  KD F  RF   M  T+   R VP+  K  V ++  EW ++G++   E   + GA
Sbjct:    4 WKGEEELKGALSSLATA-KGVSANRIKGATVACMKWSKEYKRVVHAVENVMWKADVEHRLAYMYLIDALIRASQTKFGDDKDHFAKRFGLHMHHTLSACRKVPDDHKSNVKKVVVEWKKRGVYTAQEIEEAGGA 136          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1020.318.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D8LJK6_ECTSI2.300e-9277.78CID domain-containing protein (Fragment) n=1 Tax=E... [more]
A0A6H5JF85_9PHAE6.590e-8377.94CID domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZBE3_9STRA2.480e-2350.40CID domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A1V9YU27_9STRA1.640e-1635.97Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A1V9ZH29_9STRA2.140e-1638.13Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A397BZL8_9STRA2.280e-1637.31CID domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A397C522_9STRA8.530e-1637.31CID domain-containing protein n=4 Tax=Aphanomyces ... [more]
A0A6G0UTM1_9BILA1.030e-1534.19Uncharacterized protein n=1 Tax=Halicephalobus sp.... [more]
A0A6G0WM24_9STRA3.130e-1537.14Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A418FAE5_9STRA4.500e-1537.31Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006569CID domainSMARTSM00582558neu5coord: 89..215
e-value: 1.4E-7
score: 41.2
IPR006569CID domainPROSITEPS51391CIDcoord: 79..218
score: 13.476
IPR008942ENTH/VHSGENE3D1.25.40.90coord: 82..209
e-value: 1.0E-30
score: 108.2
IPR008942ENTH/VHSSUPERFAMILY48464ENTH/VHS domaincoord: 77..200
IPR006903RNA polymerase II-binding domainPFAMPF04818CTD_bindcoord: 139..202
e-value: 5.9E-8
score: 33.4
NoneNo IPR availablePANTHERPTHR15921PRE-MRNA CLEAVAGE COMPLEX IIcoord: 91..204
NoneNo IPR availablePANTHERPTHR15921:SF7PROTEIN SCAF8coord: 91..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1020contigS-firma_F_contig1020:12662..20404 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1020.318.1mRNA_S-firma_F_contig1020.318.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1020 6084..21656 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1020.318.1 ID=prot_S-firma_F_contig1020.318.1|Name=mRNA_S-firma_F_contig1020.318.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=682bp
MTRFFRSSTYTAAVGARDLFEYLFFGGGGSEVFCSHLPWERTFLSPFVGS
ESECCTAWRCASEIQRRCVSLAVPSMANDHWDGAASMHKALKNLATSSRP
ISASRVKTAASTALDNVKEYKRVVHAIERYIRKAQPHHRIGGCFVIDSVC
RQAQSKWGHKDVFTPRFAQRMSETVETLRNVPEGDKPPVFRIFREWHEKG
MFQGLESFASDGAAAAAAGAAGPAPASYHEQSPAPQQAVSSSSPALMPLP
PDAGVIHLGLKAGDTYGSAYPPHSSSAANGGGGGAPPVNAGVVASYAPPY
EQHSVSSPPPPGEEPGGPQQYDPFAAPGGGSVQGQQQQQGQQMMMMGQHG
PGGNNMMMHHVQGMPPGAGQGMRPGMGPHGAMGPGPGRGMGPGGMGPRGM
GGPGGMRPGMGMGMGGGGGMGRGGPPQPGMFFQGGPPNGPRGGPRGAPGG
GAPGNGWGAPTPPPPNGQPRNNDAPPWGSPGGRGGGGGSGGGGGRGAGGA
SPGDRPGWSNPQARGGGARAGSAGESNNNGSSNNGNPPPPPPPGGGGRGG
GGNGGGGLPGGAGEGGAEGGGGGGRPPMPPLPPSEAGAPPPPPGSGGGGG
GEQLQEGGEAESPPPPPPSLSEGGSVLLTSKITDANWSDGSLDPEDNDDD
ADFDDDFAGAGGDGDGDGDAAGSSPKRQRVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006903RNA_pol_II-bd
IPR008942ENTH_VHS
IPR006569CID_dom