mRNA_S-firma_F_contig10166.276.1 (mRNA) Sphaerotrichia firma ET2_F female
|
Overview
Homology
BLAST of mRNA_S-firma_F_contig10166.276.1 vs. uniprot
Match: A0A6H5KI44_9PHAE (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI44_9PHAE) HSP 1 Score: 249 bits (637), Expect = 1.100e-67 Identity = 122/148 (82.43%), Postives = 133/148 (89.86%), Query Frame = 1
Query: 1 VVRTAYDETVQGQSVMPTRGFGDLYYKQRKGEDGMLLPPAEQVVTVCPEIMVHERGSSQQEELLLLACDGVWDVFSDQDAGEFLVSMLDVPVAEVTGEHLALACDALVQEALVRGSTDNITAVAVSLGSGPPXXPSAVGGRVLFSDGQ 444
VVRTAYD+ V+GQSV+PTRGFGDLYYKQRK +DG LLPPA+QVVT CPEIMVHERGSS +EELLLLACDGVWDVF +QDAGEFLV LDVPV +VTGE LALACDALV+E L RGSTDNITA+AVSLGSGPP PS+ GGRVLFSDGQ
Sbjct: 995 VVRTAYDDKVEGQSVVPTRGFGDLYYKQRKDDDGNLLPPAQQVVTSCPEIMVHERGSSGKEELLLLACDGVWDVFDNQDAGEFLVKTLDVPVGQVTGEQLALACDALVKECLRRGSTDNITAMAVSLGSGPPPRPSSAGGRVLFSDGQ 1142
BLAST of mRNA_S-firma_F_contig10166.276.1 vs. uniprot
Match: D8LND4_ECTSI (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LND4_ECTSI) HSP 1 Score: 216 bits (550), Expect = 1.420e-56 Identity = 110/148 (74.32%), Postives = 116/148 (78.38%), Query Frame = 1
Query: 1 VVRTAYDETVQGQSVMPTRGFGDLYYKQRKGEDGMLLPPAEQVVTVCPEIMVHERGSSQQEELLLLACDGVWDVFSDQDAGEFLVSMLDVPVAEVTGEHLALACDALVQEALVRGSTDNITAVAVSLGSGPPXXPSAVGGRVLFSDGQ 444
VVRTAYD+ V+GQSV+PTRGFGDLYYKQR EIMVHERGSS QEELLLLACDGVWDVF DQDAGEFLV LDVPV +VTGE LALACDALV E L RGSTDNITA+AVSLGSGPP PS+ GGRVLFSDGQ
Sbjct: 775 VVRTAYDDKVEGQSVVPTRGFGDLYYKQRXXXXXXXXXXXXXXXXXXXEIMVHERGSSGQEELLLLACDGVWDVFKDQDAGEFLVKTLDVPVGQVTGEQLALACDALVNECLRRGSTDNITAMAVSLGSGPPPRPSSAGGRVLFSDGQ 922
BLAST of mRNA_S-firma_F_contig10166.276.1 vs. uniprot
Match: A0A835YR40_9STRA (Phospholipase A(2) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR40_9STRA) HSP 1 Score: 134 bits (336), Expect = 8.630e-29 Identity = 76/141 (53.90%), Postives = 91/141 (64.54%), Query Frame = 1
Query: 1 VVRTAYDETVQGQSVMPTRGFGDLYYKQRKGEDGMLLPPAEQVVTVCPEIMVHER----GSSQ-----QEELLLLACDGVWDVFSDQDAGEFLVSMLD--VPVAEVTGEHLALACDALVQEALVRGSTDNITAVAVSLGSG 390
V+R Y +GQSV+P+R FGD YYKQ DG LL P +QVVT PE+ + ER GSS Q++ LLLACDG+WDVFS QDAGE L +L P TGE LA+ACDAL+ EAL R S DNIT +A+ L SG
Sbjct: 987 VLRIKYCAEAKGQSVVPSRSFGDFYYKQCCDADGQLLSPDKQVVTAFPEVRIVERPRSSGSSPALGGVQDQYLLLACDGLWDVFSSQDAGEMLWRILQDLCPARTPTGEDLAIACDALIAEALKRKSEDNITVMAIRLASG 1127
BLAST of mRNA_S-firma_F_contig10166.276.1 vs. uniprot
Match: A0A7S2XJ05_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJ05_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 3.680e-13 Identity = 43/110 (39.09%), Postives = 64/110 (58.18%), Query Frame = 1
Query: 52 TRGFGDLYYKQRKGEDGMLLPPAEQVVTVCPEIMVHERGSSQQEELLLLACDGVWDVFSDQDAGEFLVSMLDVPVAEVTGEHLALACDALVQEALVRGSTDNITAVAVSL 381
+RG GD +K R LPP +Q VT CPEI+V R SSQ +E ++LACDG+WDV S++ + + ++LD ++ L C+ ++ L R S DN+T V+L
Sbjct: 64 SRGLGDFSFKNRPD-----LPPDQQKVTCCPEILVEPRQSSQ-DEFIILACDGIWDVASNESCAKLVHAILDEGETDI-----GLVCEEILDTCLERDSRDNMTVAMVTL 162
BLAST of mRNA_S-firma_F_contig10166.276.1 vs. uniprot
Match: A0A0R3X9M6_HYDTA (PPM-type phosphatase domain-containing protein n=1 Tax=Hydatigena taeniaeformis TaxID=6205 RepID=A0A0R3X9M6_HYDTA) HSP 1 Score: 75.9 bits (185), Expect = 4.260e-12 Identity = 46/115 (40.00%), Postives = 65/115 (56.52%), Query Frame = 1
Query: 61 FGDLYYKQRKGEDGMLLPPAEQVVTVCPEIMVHERGSSQQEELLLLACDGVWDVFSDQDAGEFLVSMLDVPVAEVTGEHLALACDALVQEALVRGSTDNITAVAVSLGSGPPXXP 405
GD YKQ KG+ PA+Q+V+ P++ R S+ +ELL+LACDGVWDVFS+ E+L+ L + L+ AC+ + AL +GS DN+T + V L S P P
Sbjct: 17 LGDFDYKQIKGQS-----PADQLVSPEPDVTAIARVKSE-DELLVLACDGVWDVFSNDQLCEYLIHRLKCSCS------LSEACEETIDTALFKGSRDNMTMLIVGLDSVPTPDP 119
BLAST of mRNA_S-firma_F_contig10166.276.1 vs. uniprot
Match: UPI001BB28531 (protein phosphatase 1B-like isoform X3 n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB28531) HSP 1 Score: 78.2 bits (191), Expect = 5.690e-12 Identity = 46/131 (35.11%), Postives = 74/131 (56.49%), Query Frame = 1
Query: 22 ETVQGQSVMPTRGFGDLYYKQRKGEDGMLLPPAEQVVTVCPEIMVHERGSSQQEELLLLACDGVWDVFSDQDAGEFLVSMLDVPVAEVTGEHLALACDALVQEALVRGSTDNITAVAVSLGSGPPXXPSAV 414
E V G S+ +R GD YK +PP EQ+V+ PE+ V ER + +EE ++LACDG+WDV S+++ +F+ S L + +HLA C+ +++ L +GS DN++ V V+ + P A+
Sbjct: 190 ERVNG-SLAVSRALGDYDYKNNPK-----IPPTEQLVSAEPEVTVIER--TDEEEFIVLACDGIWDVMSNEELCQFIRSRLAIT------DHLAEICNQVIETCLQKGSRDNMSIVIVTFQNAPEVSQDAL 306
BLAST of mRNA_S-firma_F_contig10166.276.1 vs. uniprot
Match: A0A7S4IS57_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IS57_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 2.320e-11 Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = 1
Query: 31 QGQSVMPTRGFGDLYYKQRKGEDGMLLPPAEQVVTVCPEIMVHERGSSQQEELLLLACDGVWDVFSDQDAGEFLVSMLDVPVAEV----------TGEHL-ALACDALVQEALVRGSTDNITAVAVSLGSGP 393
+G + +R FGD +K LPP EQ V P++ +H R + + L+LACDGVWDV S+++ G+F+ +D +E+ E L D L++E L RGSTDN+TAV VSL P
Sbjct: 248 KGDRLGMSRAFGDYDFKANAD-----LPPEEQAVVCTPDLRIHPRDGTM-DLYLVLACDGVWDVMSNEEVGQFVHGRVDRIRSEMGRGGADGHEDADEGLWGTVADQLLEECLGRGSTDNMTAVIVSLEKAP 373
BLAST of mRNA_S-firma_F_contig10166.276.1 vs. uniprot
Match: A0A7R8ZLM5_9CRUS (Hypothetical protein n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8ZLM5_9CRUS) HSP 1 Score: 74.3 bits (181), Expect = 2.640e-11 Identity = 47/120 (39.17%), Postives = 64/120 (53.33%), Query Frame = 1
Query: 55 RGFGDLYYKQRKGEDGMLLPPAEQVVTVCPEIMVHERGSSQQEELLLLACDGVWDVFSDQDAGEFLVSMLDVPVAEVTGEHLALACDALVQEALVRGSTDNITAVAVSLGSGPPXXPSAV 414
R GD YKQ +G+ P EQ+V+ PEI V ER + +E L+LACDG+WDV S+ D EF+ S L V E L+ + +V L +GS DN++ V V P +AV
Sbjct: 50 RALGDFVYKQVEGKG-----PTEQLVSPEPEITVQERQLT--DEFLVLACDGIWDVMSNDDVCEFIRSRLKVT------ESLSQVANEVVDTCLYKGSQDNMSIVLVKFEGAPKLDEAAV 156
BLAST of mRNA_S-firma_F_contig10166.276.1 vs. uniprot
Match: A0A1Z5KEX2_FISSO (PPM-type phosphatase domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KEX2_FISSO) HSP 1 Score: 77.8 bits (190), Expect = 2.750e-11 Identity = 48/138 (34.78%), Postives = 73/138 (52.90%), Query Frame = 1
Query: 4 VRTAYDETVQGQSVMPT-RGFGDLYYKQRKGEDGMLLPPAEQVVTVCPEIMVHERGSSQQEELLLLACDGVWDVFSDQDAGEFLVSMLDVPVAEVTGEHLALACDALVQEALVRGSTDNITAVAVSLGSGPPXXPSAV 414
V+T Y + ++++ T R FGD YK K LP EQ V P+++V +R S+ + +++ACDG+WDV S Q G+F++ + A+ + L D L+QE L GS DN++ V VSL P V
Sbjct: 450 VQTLYKVALSKENLLATSRAFGDFEYKTNKD-----LPADEQAVVAVPDVVVRQR--SKDDLFMVVACDGIWDVMSPQQVGDFVLQNMTTE-AKQSKVALVDVADKLLQECLNLGSRDNMSVVVVSLSDASELPPRKV 579
BLAST of mRNA_S-firma_F_contig10166.276.1 vs. uniprot
Match: A0A068YIP0_ECHMU (Protein phosphatase 1b n=4 Tax=Taeniidae TaxID=6208 RepID=A0A068YIP0_ECHMU) HSP 1 Score: 76.6 bits (187), Expect = 2.890e-11 Identity = 47/122 (38.52%), Postives = 68/122 (55.74%), Query Frame = 1
Query: 40 SVMPTRGFGDLYYKQRKGEDGMLLPPAEQVVTVCPEIMVHERGSSQQEELLLLACDGVWDVFSDQDAGEFLVSMLDVPVAEVTGEHLALACDALVQEALVRGSTDNITAVAVSLGSGPPXXP 405
S+ +R GD YKQ KG+ PA+Q+V+ P++ R + +ELL+LACDGVWDVFS+ E+L+ L + L+ AC+ + AL +GS DN+T + V L S P P
Sbjct: 190 SLAVSRALGDFDYKQIKGQS-----PADQLVSPEPDVTAIARVKVE-DELLVLACDGVWDVFSNDQLCEYLIHRLKCSCS------LSEACEETIDTALFKGSRDNMTMLIVGLDSMPTPDP 299 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10166.276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10166.276.1 >prot_S-firma_F_contig10166.276.1 ID=prot_S-firma_F_contig10166.276.1|Name=mRNA_S-firma_F_contig10166.276.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=134bp MPTRGFGDLYYKQRKGEDGMLLPPAEQVVTVCPEIMVHERGSSQQEELLLback to top mRNA from alignment at S-firma_F_contig10166:1216..4915- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10166.276.1 ID=mRNA_S-firma_F_contig10166.276.1|Name=mRNA_S-firma_F_contig10166.276.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3700bp|location=Sequence derived from alignment at S-firma_F_contig10166:1216..4915- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10166:1216..4915- >mRNA_S-firma_F_contig10166.276.1 ID=mRNA_S-firma_F_contig10166.276.1|Name=mRNA_S-firma_F_contig10166.276.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=804bp|location=Sequence derived from alignment at S-firma_F_contig10166:1216..4915- (Sphaerotrichia firma ET2_F female)back to top |