prot_S-firma_F_contig1013.227.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1013.227.1
Unique Nameprot_S-firma_F_contig1013.227.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length1673
Homology
BLAST of mRNA_S-firma_F_contig1013.227.1 vs. uniprot
Match: D7FY03_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY03_ECTSI)

HSP 1 Score: 588 bits (1515), Expect = 5.220e-176
Identity = 807/1735 (46.51%), Postives = 898/1735 (51.76%), Query Frame = 0
Query:    1 MLKRPNPYRKTRAAGTLDDLMFDMDKRRHTSFRFQNYQNFITDRPGKFDERYRQKLSWCALDEAETGQLDYLTEGLSPNGGRRMSTSSVGSSRAGGXXXXXXXXXXSLLSNQAQXXXXXXXXXXXXXXXXXXXXXXXXXXX----------DDAVRFACGGWLNAGSGDPPSGFLSPARFKSPPLP-SPGFMSPPICEGGG---TPKPPSGRSWKAPQFAIDSENRGPGVLLEDSPMHHSHD--QHHRRRPTGQDDAFPIVGSA-RSLSPPPGPRRHNMQWAGPSFPAGTPAGGLRRSTSSSSSG----------RRSSTSAFSLGTGSVRGPGSWTRASASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASAGGCGVGGAVEGAGAT-EKVGDGGVEA--RTLLPTAEEGDEEQELAGGSGEEGEGGNPASSPIGV-----ESSPSADXXXXXXXXXGNSGSAAVDEAGGLPEDDAVE-AEAVGNPGREPSYGTVSSAMFMSGATDGARGSLLLAASNAFPRKSEESTYFESNASTAIPVPAARGSSSIGGIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRLEDGGPRGXXXXXXXXXXRSAEVVVRAADPAVLVRPPRVGDGKLEHDKERRRGVASDLEAVIAELSRRKSLLAWEDGEGAASDPGNSPVR--EEGGRGTVA----------GQDEEEPHLSTGSQPLPKAEGNAMRGEPGEVDDAVAAVADGPADTDADAAAAPIATSIAEAAAVPVLVESDVTATSEDLVVALSAPRGDENAPQPQPLPAAASTLPPLSPPSVAAXXXXAPGDKAP-TAMVAPSGGPRSPGPAVPISVLASAAAVTAAKGFESVSSSSTRVGLSLRXXXXXXXXXXXXXXXXXXXXXXXXXXXSKDTDAAVVKTPSTARPGAEKKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNARASSPRLADKA--------------------------------------------------------------------------------VAGVVGSPAAPRAAAPVAGYSAPTKSSKARVGGGDDSDAAGKGGPTXXXXXXXXXXXXXXXXXXXAHQRKH--------QQKQGPRGRE-EVGRGRDRARFPGDKGGRSGKGGRRVSSSAPPPELRNGG-GSARVEALCANIVTASDSVTSVQEQADGAPPLSGIPAVTGDASR------RHRRSLSAGVLPKSLGAGVMDSTLELADAALALSGPRTTAATSEAGKS---PTAGGRGGTRGRGKGASDRRSMAXXXXXXXXS----SPRKGKYQVKDSFNRLKGWINGGFTGNGGRKNSPATATKPRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------GKGAVDSRNLTPNAAVDRAAARVEARRXXXXXXXXXXXXXXXXPFGRPGA-ATRSSPRTKAAGGTNPVRRRKSVSKKSSPSNRSPAAASLAGARGVVGASKRVTKPAAGTPAAAPAVEVGSTAQ-QRGRLPTRRLEVAMAGSSLSPSSSP--SPLPRRTLA---DDXXXXXXXXXXXXXXXXXXAVAVPRKCQAVPPSAAAXXXXXVALSPASERMAVVPPALSSTGPSARAKXXKXARSLGATVPALSHASSPR 1552
            MLKRPNPYRK+RAAGTLDDLMFDMDKRRHTSFRFQNYQNFITDRPGKFDERYRQKLSWCALDE ETGQLDYLTEGLSP GGRRMSTSSVGSSR GGXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXXXXX          DDA   +  G       DP +GFLSP+RF+ PP   SP FMSPPI EGGG   T K  SGRSWKAPQFA+D +N GPGVLLE SP  H H   Q  RRR    D++FP+ G   RSLSP P   RHNMQWA  S PAGT AG                      RRSS SAFSLGTG VRGPGSWTR    XXXXXXXXXXXXX    XXXXXXXXXXXXXXX             +G G T E+   G   A  + L    EE + E E  G S        P    +GV     E   S             + +A  +E     EDD V  A +  NPGRE SYGTV+S+ F SG  D ARGSLL A+ N  PRKS ESTYFESNAS A+ VP+A                                                                 GG R  XXXX      +  VV  A DPA LVRPPRVGDGKLEHDKERR GVA+DLEAVIAEL+RRKSLLAWEDGEGA SDP  SP R  E GG G V           G+ E+E  LS        A   A RG    VDD    VA   A  DA     P   +     AV     S      +  VV  S+  GDEN    +P P      P       A     A  D A  T M+ PS  PR  G ++    LASAAA   A GF+S SSSST   L L                             +  +A    +P +A P A+   A                       XXXXXXXXXXXXXXXXXXXXXXXXXX         A+A SPR A K+                                                                                          PRAA   AGYSAPTKSSKARVG              XXXXXXXXXXXXXXXXXXX  Q +         +++Q PR +E E  RGRDR R P +  G + +G RR+SSSAPPPELR+GG  SARVE +CA+I+T SD +TS QEQ +GAPPLSG+PA +  ++        HRRS SAG+LP+S+  GVMD  +ELADAA+ LSG RT+   +E G++     A G    RG+G G+ DRRSM   XXXXXX     SPRKGKYQVKDSFNRLKGWINGGFTGNGGRKN+ +       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                       G    DSRNL  + AV+RAAARVEARR      XXXXXXXXXX      A   + SPR   AG    +RR K   +  S S  SP++A+         A        AGT  AAP  E  + +   RG                        SPL  R      ++         XXXXXXXXXA  +PRK +AVP     XXXXX   SPASERMAVVPPA SSTGPSAR K  K ARSLGAT+P LS AS PR
Sbjct:    1 MLKRPNPYRKSRAAGTLDDLMFDMDKRRHTSFRFQNYQNFITDRPGKFDERYRQKLSWCALDE-ETGQLDYLTEGLSPKGGRRMSTSSVGSSRTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDDDAASTSTRGE------DPAAGFLSPSRFRLPPSSTSPRFMSPPIGEGGGGGGTAKAHSGRSWKAPQFAMDLDNHGPGVLLEHSPTRHGHTGLQQQRRRAAASDESFPVSGGGTRSLSPSPALHRHNMQWARQS-PAGTGAGAGAMKNGGXXXXXXXXXXXXXXRRSSNSAFSLGTGPVRGPGSWTRGXXXXXXXXXXXXXXXXVSSGXXXXXXXXXXXXXXXXXXXXXXXP---EQGRGRTAERAEQGCARAPPQQLTSAPEEDEAENEERGES--------PVQPRVGVDDEVTEVGASGGTDVCPGAAASVAATAKPEEKSWAGEDDKVGGAASTANPGREASYGTVTSSAFCSGVGD-ARGSLL-ASFNTLPRKSLESTYFESNASVAVTVPSASXXXXXXXXXXVVWGGAGEPLSASGGDTGAGRTPAATGGQGEGAVKAAEKEEEQAQGPKKGGKSGGGGRSRXXXXMARGPGADMVVGHAVDPAALVRPPRVGDGKLEHDKERRLGVANDLEAVIAELNRRKSLLAWEDGEGAVSDPCESPARATESGGGGDVGAGKETRQEEKGEVEDEHRLSARGTLQASAGSGAERGR---VDDEPVRVARVLASEDAFGERKPNEATPLAGQAVEPAAASLAPGVLQTAVVPSSSFGGDEN----KPPPLTEEPSPXXXXXXXAGADAGAAADVAESTTMLPPSAAPRGAGASLSARTLASAAAAAEATGFDSCSSSSTTAQLGL------PKERVEARADGAAAGRVGGRGWRQGREATAPVSPRSA-PTAKATWAGVSTTLTKENAGDRRVKASSAPRXXXXXXXXXXXXXXXXXXXXXXXXXXA-------GAKAGSPRTAAKSGFASAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAAPAPAGYSAPTKSSKARVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRRVGSXXXXQKERQSPRSKEAEDRRGRDRVRGPEESNGGASRGCRRLSSSAPPPELRDGGLSSARVEGICADIITPSDLLTSAQEQVEGAPPLSGVPASSSSSTTPRPARGHHRRSTSAGMLPRSIDEGVMDPAVELADAAMTLSGVRTSGGAAEDGRARRGAVARGTARERGKGGGSFDRRSMVGGXXXXXXXXASPSPRKGKYQVKDSFNRLKGWINGGFTGNGGRKNNSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRARAVDKSVDKRSASAVGGXXXXXXXXXXXXXXXTAGVGNRNGDSRNLNASTAVERAAARVEARRAAERDAXXXXXXXXXXXXXXGTAKGAKPSPRAAVAGA---IRRNKPHKRTPSGSRASPSSATXXXXXXXXKAGGVGAPAKAGT--AAPTTESAAGSDPHRGXXXXXXXXXXXXXXXXXXXXXXXLSPLATRLSPAHKEEVTAAVKAAAXXXXXXXXXAGVLPRKVRAVPXXXXXXXXXXXXXSPASERMAVVPPAPSSTGPSARFKTSKAARSLGATIPTLSPASLPR 1688          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1013.227.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FY03_ECTSI5.220e-17646.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1013contigS-firma_F_contig1013:14599..24390 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1013.227.1mRNA_S-firma_F_contig1013.227.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1013 14107..25078 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1013.227.1 ID=prot_S-firma_F_contig1013.227.1|Name=mRNA_S-firma_F_contig1013.227.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=1673bp
MLKRPNPYRKTRAAGTLDDLMFDMDKRRHTSFRFQNYQNFITDRPGKFDE
RYRQKLSWCALDEAETGQLDYLTEGLSPNGGRRMSTSSVGSSRAGGGGGD
RDRDRDSLLSNQAQQQQQQQQQRDSADSSEHSSGGGGGGGGDDAVRFACG
GWLNAGSGDPPSGFLSPARFKSPPLPSPGFMSPPICEGGGTPKPPSGRSW
KAPQFAIDSENRGPGVLLEDSPMHHSHDQHHRRRPTGQDDAFPIVGSARS
LSPPPGPRRHNMQWAGPSFPAGTPAGGLRRSTSSSSSGRRSSTSAFSLGT
GSVRGPGSWTRASASSRSSTSTTSSKLDGGGSGGGGGGGGESDTVVVSAS
AGGCGVGGAVEGAGATEKVGDGGVEARTLLPTAEEGDEEQELAGGSGEEG
EGGNPASSPIGVESSPSADDDTSGGGSDGNSGSAAVDEAGGLPEDDAVEA
EAVGNPGREPSYGTVSSAMFMSGATDGARGSLLLAASNAFPRKSEESTYF
ESNASTAIPVPAARGSSSIGGIGGAGAGAGATEAALGGGALRTLTELKAG
AGSNGEGKEDEAEQENQGREGRGKRLEDGGPRGGGGGGGRGRERSAEVVV
RAADPAVLVRPPRVGDGKLEHDKERRRGVASDLEAVIAELSRRKSLLAWE
DGEGAASDPGNSPVREEGGRGTVAGQDEEEPHLSTGSQPLPKAEGNAMRG
EPGEVDDAVAAVADGPADTDADAAAAPIATSIAEAAAVPVLVESDVTATS
EDLVVALSAPRGDENAPQPQPLPAAASTLPPLSPPSVAAAAAAAPGDKAP
TAMVAPSGGPRSPGPAVPISVLASAAAVTAAKGFESVSSSSTRVGLSLRM
GTAEASALTAAAAAAAATAAAEARGGSKDTDAAVVKTPSTARPGAEKKTA
AAAATKTKTKTGERKVKPSAAPPPAPTSTAASPPTPAGHGGADADARPRT
TAAMAVANARASSPRLADKAVAGVVGSPAAPRAAAPVAGYSAPTKSSKAR
VGGGDDSDAAGKGGPTGGAAGVSAAAAAAPSSQRSAHQRKHQQKQGPRGR
EEVGRGRDRARFPGDKGGRSGKGGRRVSSSAPPPELRNGGGSARVEALCA
NIVTASDSVTSVQEQADGAPPLSGIPAVTGDASRRHRRSLSAGVLPKSLG
AGVMDSTLELADAALALSGPRTTAATSEAGKSPTAGGRGGTRGRGKGASD
RRSMAAGGGGGGASSPRKGKYQVKDSFNRLKGWINGGFTGNGGRKNSPAT
ATKPRAAAAAAGGGGGGGGVRAVNGSGDRRSSSAVPGHHRTSAPPSRGGG
GAAGGKGAVDSRNLTPNAAVDRAAARVEARRAAEREALKSAREGEATPFG
RPGAATRSSPRTKAAGGTNPVRRRKSVSKKSSPSNRSPAAASLAGARGVV
GASKRVTKPAAGTPAAAPAVEVGSTAQQRGRLPTRRLEVAMAGSSLSPSS
SPSPLPRRTLADDDEVAAAAVAAAAVGAASSAVAVPRKCQAVPPSAAATA
AAAVALSPASERMAVVPPALSSTGPSARAKTSKAARSLGATVPALSHASS
PRKPGGGSAAPSPRAGCRSRAAPVESPGPVRSPRAGDVRSKSRSPRSGGF
GREGGFFGGRSDGKSAAGGGESVRSPSGRSKSARDGGASRESGGGGGGSR
SSAASTPTASKGRKAGRTVRVV*
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