prot_S-firma_F_contig10100.193.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10100.193.1
Unique Nameprot_S-firma_F_contig10100.193.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length237
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10100.193.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 220..236
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 50..160
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 215..219
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 181..191
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 237..237
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..49
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 161..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 192..214
NoneNo IPR availableTMHMMTMhelixcoord: 214..236
NoneNo IPR availableTMHMMTMhelixcoord: 161..183
NoneNo IPR availableTMHMMTMhelixcoord: 190..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10100contigS-firma_F_contig10100:541..1251 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10100.193.1mRNA_S-firma_F_contig10100.193.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10100 541..1252 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10100.193.1 ID=prot_S-firma_F_contig10100.193.1|Name=mRNA_S-firma_F_contig10100.193.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=237bp
LFGVLSGAFFRLRRGSCRGTRGRGFTHIFTFTHVFTFTHVFTFTHVFIFT
HVFTFTHVLLCLERGSCGITASVFAGAVNVTLPRSNQGDCRVTVSFLVGG
LSCAFVPLKRQSCRVAVPIPFSGGKLSGVFLRSRRGIHRGNGQRLERGSG
RGVYRRGLRNAWLFPLLPLLLYVTPVSVRVPLFHRSRRGTSVFAVAFAFA
FIFTFFFTVTFMMILVSVSMFVFADLITLGTGALLLS
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