mRNA_S-firma_F_contig10077.149.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10077.149.1
Unique NamemRNA_S-firma_F_contig10077.149.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10077.149.1 vs. uniprot
Match: W2H281_PHYPR (IFRD domain-containing protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2H281_PHYPR)

HSP 1 Score: 134 bits (338), Expect = 2.240e-33
Identity = 95/310 (30.65%), Postives = 154/310 (49.68%), Query Frame = 1
Query:   61 RYTTRQQGLKNITAALRAVYMAENVVDGVAGLVDTLLDCVKRGKPTEADLACETLSVVIITCCANREDVLARLEEVLTPFINGCKSHTVVAASVRLFGIAVYVCGVEREHATQFLAFTERLFCSRRIATVVRAQALDSWCLVASTLSSERSTINREMIPRYLPVLRALLEYPSLAVRTSAGRCIALLFGSRWVVAGSVLSFEDEYDSASMEGQVGDLLEALSKDRTRHRSKREKRRQRALFRDVYATFKTGHLPWTTIRVRQLVSELEGWANRVQAEDMKEALGQGWQPHVAENPFIRSVFHVSGLLSDR 990
            R TTR   L+ +TA L+     E+V +     VD +L C+++    EA L    L+++ I    + E    R + VL P I   ++  +  +++R  G+  +VC VE E+  + L   E  F  + I  + +A ALDSW LVAS+LS E    + E++ R +P   ALL++  + VR++AG  +A L+ S     G  L + +E  +  +E         +SKD +          QR +FRD+++T  +G  P  +  V+  V E+  W +  Q E MKE L  G Q H+  N  +R++  +   L DR
Sbjct:    6 RTTTRVAALEKLTAYLQQYLAPEDVSES---FVDNVLGCLRKPSEGEAVLGSRILAIMAIIFGEDEERYFQRSKNVLKPLIKTARNAKIKVSTIRALGLICFVCSVEEENTEELLELFETFFNPKIIGDICKA-ALDSWGLVASSLSDE-ILASDELLERLVPKFLALLDHKDVDVRSAAGENVAFLYESAQN-CGVPLPYSEEILARFLE---------MSKDSSXXXXXXXXXTQRVVFRDIHSTLASGETPHVSFSVKSDVLEISSWKSVKQFEAMKECLQTGLQEHIKYNNILRAILDLPETLEDR 300          
BLAST of mRNA_S-firma_F_contig10077.149.1 vs. uniprot
Match: G4YTH2_PHYSP (IFRD domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YTH2_PHYSP)

HSP 1 Score: 136 bits (342), Expect = 2.650e-33
Identity = 96/320 (30.00%), Postives = 156/320 (48.75%), Query Frame = 1
Query:   31 EEGMEQLAQKRYTTRQQGLKNITAALRAVYMAENVVDGVAGLVDTLLDCVKRGKPTEADLACETLSVVIITCCANREDVLARLEEVLTPFINGCKSHTVVAASVRLFGIAVYVCGVEREHATQFLAFTERLFCSRRIATVVRAQALDSWCLVASTLSSERSTINREMIPRYLPVLRALLEYPSLAVRTSAGRCIALLFGSRWVVAGSVLSFEDEYDSASMEGQVGDLLEALSKDRTRHRSKREKRRQRALFRDVYATFKTGHLPWTTIRVRQLVSELEGWANRVQAEDMKEALGQGWQPHVAENPFIRSVFHVSGLLSDR 990
            ++ +E+L +KR TTR   L+ +T  L      E++ +     VD +L C+++    EA L    L+++ I    + E    R + VL P +   ++  +  A+VR  G+  +VC VE E+  + L   E  F  + +  + +A ALDSW LVAS LS E    + E++ R +P   ALL++  + VR++AG  +A L+ S     G  L + +E         + D    +SKD            QR +FRD+++T   G  P  +  V+  V E+  W +  Q E MKE L  G Q H+  N  +R++  +   L DR
Sbjct:   45 DDAVEELTEKRTTTRVAALEKLTTHLLQYLAPEDISES---FVDNVLGCLRKPGEGEAVLGSRILAILAIIFGEDEERFFQRSKNVLKPLVKTARNAKIKVATVRALGLICFVCSVEVENTEELLELFETFFNPKIVGDICKA-ALDSWGLVASNLSDEMLA-SGELLERLVPKFLALLDHKDVDVRSAAGENVAFLYESA-ASCGVPLPYGEE---------ILDRFLEMSKDSXXXXXXXXXXTQRIVFRDIHSTLSAGETPHVSFSVKSEVLEISSWKSVKQFEAMKECLQTGLQEHIKYNNMLRAMLDLPETLEDR 349          
BLAST of mRNA_S-firma_F_contig10077.149.1 vs. uniprot
Match: A0A329RLF2_9STRA (IFRD domain-containing protein n=27 Tax=Phytophthora TaxID=4783 RepID=A0A329RLF2_9STRA)

HSP 1 Score: 136 bits (342), Expect = 3.160e-33
Identity = 96/324 (29.63%), Postives = 160/324 (49.38%), Query Frame = 1
Query:   16 ALEAFEEGMEQLAQKRYTTRQQGLKNITAALRAVYMAENVVDGVAGLVDTLLDCVKRGKPTEADLACETLSVVIITCCANREDVLARLEEVLTPFINGCKSHTVVAASVRLFGIAVYVCGVEREHATQFLAFTERLFCSRRIATVVRAQALDSWCLVASTLSSERSTINREMIPRYLPVLRALLEYPSLAVRTSAGRCIALLFGSRWVVAGSVLSFEDEYDSASMEGQVGDLLEALSKDRTRHRSKREKRRQRALFRDVYATFKTGHLPWTTIRVRQLVSELEGWANRVQAEDMKEALGQGWQPHVAENPFIRSVFHVSGLLSD 987
            A +  +E +E+L +KR TTR   L+ +TA L      E+V +     +D +L C+++    EA L    L+++ I    + E    R + VL P +   ++  +  +++R  G+  +VC VE E+  + L   E  F  + I  + +A ALDSW LVAS+LS E    + +++ R +P   ALL++  + VR++AG  +A L+ S     G  L + +E         + D    +SKD            QR +FRD+++T  +G  P  +  V+  V E+  W +  Q E MKE L  G Q H+  N  +R++  +   L D
Sbjct:   50 AEQEIDEAIEELTEKRTTTRIAALEKLTAYLLQYLAPEDVSES---FMDNVLGCLRKPSEGEAVLGSRILAIMAIIFGEDEERFFQRSKNVLKPLVKTARNAKIKVSTIRALGLICFVCSVEEENTEELLELFETFFNPKIIGDISKA-ALDSWGLVASSLSDEMLASD-QLLERLVPKFLALLDHKDVEVRSAAGENVAFLYESAQN-CGVPLPYSEE---------ILDRFLEMSKDSXXXXXXXXXXTQRIVFRDIHSTLASGETPHVSFSVKSEVLEISSWKSVKQFEAMKECLQTGLQEHIKYNNILRAMLDLPETLED 358          
BLAST of mRNA_S-firma_F_contig10077.149.1 vs. uniprot
Match: H3HAU8_PHYRM (IFRD domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HAU8_PHYRM)

HSP 1 Score: 134 bits (338), Expect = 9.920e-33
Identity = 91/321 (28.35%), Postives = 159/321 (49.53%), Query Frame = 1
Query:   28 FEEGMEQLAQKRYTTRQQGLKNITAALRAVYMAENVVDGVAGLVDTLLDCVKRGKPTEADLACETLSVVIITCCANREDVLARLEEVLTPFINGCKSHTVVAASVRLFGIAVYVCGVEREHATQFLAFTERLFCSRRIATVVRAQALDSWCLVASTLSSERSTINREMIPRYLPVLRALLEYPSLAVRTSAGRCIALLFGSRWVVAGSVLSFEDEYDSASMEGQVGDLLEALSKDRTRHRSKREKRRQRALFRDVYATFKTGHLPWTTIRVRQLVSELEGWANRVQAEDMKEALGQGWQPHVAENPFIRSVFHVSGLLSDR 990
             +E +E+L +KR TTR   L+ +T  ++     + + +     +  +L C+++    EA L    L+++ +    + E    R + VL P +   ++  +  A++R  G+  +V  VE E+A + L   E  F  + +  + +A ALDSW LVAS+LS E   ++ E++ R +P   ALL++ ++ VR++AG  +A L+ S     G  L + DE         + D    +SKD            QR +FRD+++T  TG  P  +  V+  V E+  W +  Q E +K+ L  G Q H+  N  +R++  +   L DR
Sbjct:   44 IDEAIEELTEKRTTTRVAALEKLTTYVQQYVPPDEISES---FLSNVLGCLRKPSEGEAVLGSRILAIIALIFGDDEERFFQRSKNVLKPLVKTARNAKIKVATIRALGLICFVSSVEEENAAELLELFETFFNPKIVGDICKA-ALDSWGLVASSLSDEM-LVSDELLERLVPKFLALLDHKNVEVRSAAGENVAFLYESAQS-CGVPLPYGDE---------IVDRFLEMSKDNXXXXXXXXXXXQRVVFRDIHSTLATGETPHVSFSVKSDVLEISSWKSVKQFEAVKDCLQTGLQEHIKYNNMLRAMLDLPETLEDR 349          
BLAST of mRNA_S-firma_F_contig10077.149.1 vs. uniprot
Match: K3WKD3_GLOUD (IFRD domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKD3_GLOUD)

HSP 1 Score: 128 bits (321), Expect = 3.340e-30
Identity = 90/322 (27.95%), Postives = 156/322 (48.45%), Query Frame = 1
Query:   25 AFEEGMEQLAQKRYTTRQQGLKNITAALRAVYMAENVVDGVAGLVDTLLDCVKRGKPTEADLACETLSVVIITCCANREDVLARLEEVLTPFINGCKSHTVVAASVRLFGIAVYVCGVEREHATQFLAFTERLFCSRRIATVVRAQALDSWCLVASTLSSERSTINREMIPRYLPVLRALLEYPSLAVRTSAGRCIALLFGSRWVVAGSVLSFEDEYDSASMEGQVGDLLEALSKDRTRHRSKREKRRQRALFRDVYATFKTGHLPWTTIRVRQLVSELEGWANRVQAEDMKEALGQGWQPHVAENPFIRSVFHVSGLLSDR 990
            A +E +E+L +KR TTR   L+ ++  L    +A+++ +     V  +L C+++    EA      L+++ +    + E    R   VL P     +S  V AAS+R   +  +VC VE E+    +   E+ F   +I   + + AL++W L+AS+LS E    + E + R LP    LL +  + VR++AG  IALL+ S     G  L +++E         + +    +SKD +           R +FRDV+AT   G  P  +  V+  + ++  W + +Q E +K AL  G+Q H+  N  +RS+  +   + +R
Sbjct:   60 AIDEAIEELTEKRTTTRVAALEKLSGHLSQYLLADSISES---FVTNVLSCLRKPSEDEAIHGARVLALMSVILGGDEERFFQRASNVLEPLAKTSRSAAVKAASIRALALICFVCSVEDENTESLMKVFEKYF-DLKIVGSICSVALEAWGLLASSLSDEELA-HDEYVDRCLPQFLELLTHVDVEVRSAAGENIALLYESAQK-CGLTLPYDEE---------IVEKFRVMSKDNSXXXXXXXXXXXRMVFRDVHATLANGESPQVSFSVKNELLDVSSWRSIMQLEAIKNALRTGFQEHIKYNNVVRSILDLPESMEER 366          
BLAST of mRNA_S-firma_F_contig10077.149.1 vs. uniprot
Match: A0A3F2S3W2_9STRA (IFRD domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S3W2_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.160e-29
Identity = 90/320 (28.12%), Postives = 153/320 (47.81%), Query Frame = 1
Query:   31 EEGMEQLAQKRYTTRQQGLKNITAALRAVYMAENVVDGVAGLVDTLLDCVKRGKPTEADLACETLSVVIITCCANREDVLARLEEVLTPFINGCKSHTVVAASVRLFGIAVYVCGVEREHATQFLAFTERLFCSRRIATVVRAQALDSWCLVASTLSSERSTINREMIPRYLPVLRALLEYPSLAVRTSAGRCIALLFGSRWVVAGSVLSFEDEYDSASMEGQVGDLLEALSKDRTRHRSKREKRRQRALFRDVYATFKTGHLPWTTIRVRQLVSELEGWANRVQAEDMKEALGQGWQPHVAENPFIRSVFHVSGLLSDR 990
            +E +E+L +KR TTR   L+ +T  L      E++ +     +  +L C+++   +EA      L+++ I    + E    R + VL P I   ++  +  +++R  G+  +VC VE E+  + L   E  F  + +  + ++ ALDSW LVAS+LS +  + N  M+ R LP   ALL++  + VR++AG  +A L+ +       +      YD   +E         +SKD             R +FRD+++T   G  P  +  V+  V E+  W +  Q E MKE L  G Q H+  N  +R++  +   L DR
Sbjct:   55 DEAIEELTEKRTTTRVAALEKLTTHLLQYLAPEDISES---FLSNVLGCLRKPSESEAVRGSRILAIMAIIFGEDEERFYQRSKNVLKPLIKTARNAKIKVSAIRALGLICFVCSVEEENCEEVLELFETFFNPKIVGNICKS-ALDSWGLVASSLSDDILS-NDGMVERVLPKFLALLDHKDVDVRSAAGENVAFLYENAQSCGVPL-----PYDEGILE-----RFREMSKDXXXXXXXXXXXXXRVVFRDIHSTLSNGETPHVSFTVKGEVLEINSWKSVKQFEAMKECLQAGLQEHIKYNNVLRALLDLPETLEDR 359          
BLAST of mRNA_S-firma_F_contig10077.149.1 vs. uniprot
Match: A0A0P1AJQ1_PLAHL (Interferon-related protein PC4 like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJQ1_PLAHL)

HSP 1 Score: 118 bits (296), Expect = 8.260e-27
Identity = 87/313 (27.80%), Postives = 155/313 (49.52%), Query Frame = 1
Query:   49 LAQKRYTTRQQGLKNITAALRAVYMAENVVDGVAGLVDTLLDCVKRGKPTEADLACETLSVVIITCCANREDVLARLEEVLTPFINGCKSHTVVAASVRLFGIAVYVCGVEREHATQFLAFTERLFCSRRIATVVRAQALDSWCLVASTLSSERSTINREMIPRYLPVLRALLEYPSLAVRTSAGRCIALLFGSRWVVAGSVLSFEDEYDSASMEGQVGDLLEALSKDRTRHRSKREKRRQRALFRDVYATFKTGHLPWTTIRVRQLVSELEGWANRVQAEDMKEALGQGWQPHVAENPFIRSVFHVSGLLSD 987
            L +KR  TR   L+ +T  L      E+V D     ++ +L+C+++    EA L    L+++ I   +N E    R + VL P I   ++  V ++++   G+  ++C VE E+    +   E  F     +++ +A AL+SW L+AS+L+ E    +   + R +P + ALL++  + VR+SAG  +ALL  S    + S+   ED          V  +LE +SKD  +  SK++++ Q  +FRD+++T      P  +  VR  + ++  W +  Q E +K  L  G Q H+  N  +R++  +     D
Sbjct:   50 LTEKRTRTRVAALEKLTTHLLNCLAPEDVSDS---FINNVLECLRKPSEEEAVLGSRILAIMAIIFGSNEERFFHRSKHVLRPLIRNARNAKVKSSTIHALGLIGFLCIVENENTEDLMKLFETFFNLSVHSSICKA-ALESWGLIASSLTDEMLA-SESFLERIVPQILALLDHKDVDVRSSAGENLALLHESAENCSVSLPCGEDI---------VVQILE-MSKDGNKRSSKKDRKTQHIVFRDIHSTLANSETPHVSFLVRGKMLDIRSWKSVKQFEAVKGCLQTGLQDHITYNNALRAMLGLPETFED 347          
BLAST of mRNA_S-firma_F_contig10077.149.1 vs. uniprot
Match: A0A3M6VCB6_9STRA (IFRD domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCB6_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.420e-25
Identity = 96/324 (29.63%), Postives = 156/324 (48.15%), Query Frame = 1
Query:   31 EEGMEQLAQKRYTTRQQGLKNITAALRAVYMAENVVDGVAGLVDTLLDCVKRGKPTEADLACETLSVVIITCCANREDVLARLEEVLTPFINGCKSHTVVAASVRLFGIAVYVCGVEREHATQFLAFTERLFCSRRIATVVRAQALDSWCL--VAST--LSSERSTINREMIPRYLPVLRALLEYPSLAVRTSAGRCIALLFGSRWVVAGSVLSFEDEYDSASMEGQVGDLLEALSKDRTRHRSKREKRRQRALFRDVYATFKTGHLPWTTIRVRQLVSELEGWANRVQAEDMKEALGQGWQPHVAENPFIRSVFHVSGLLSDR 990
            +E +E+L +KR TTR   ++ +T  L      E+V +     +D +L C+++    EA L    L+++ I    + E    R + VL P I   K+  V  A++R   +  ++  VE E+  + L   E  F  + I  + +A ALDSW L  V  T  L     TI+R ++PR+L     LLE+  + VR++AG  +A L+       G  L + +E         VG  LE +SK+ +          QR +FRD+++T  TG  P  +  V+  V E+  W +  Q E +K+ L  G Q H+  N  +R++  +   L DR
Sbjct:   55 DEAIEELTEKRTTTRVAAMEKLTTYLLQYLAPEDVNES---FIDNVLGCLRKPSEDEAVLGSRILAILAIIFGDDEERFYQRSKAVLNPLIKTAKNAKVKVATIRALALICFLSSVEEENTLELLGLLETFFNPKIIGDICKA-ALDSWGLHNVLQTICLPDCMLTIDR-LVPRFL----VLLEHKDVEVRSAAGENVAFLYECAQC-CGVFLPYGEEI--------VGRFLE-MSKNNSXXXXXXXXXTQRFVFRDIHSTLATGETPHVSFTVKGEVLEISTWRSVKQFEAVKDCLQTGLQEHIKYNNALRAMLDLPETLEDR 359          
BLAST of mRNA_S-firma_F_contig10077.149.1 vs. uniprot
Match: A0A818KAK6_9BILA (Hypothetical protein n=2 Tax=Rotaria sordida TaxID=392033 RepID=A0A818KAK6_9BILA)

HSP 1 Score: 111 bits (277), Expect = 6.980e-24
Identity = 89/334 (26.65%), Postives = 154/334 (46.11%), Query Frame = 1
Query:   22 EAFEEGMEQLAQKRYTTRQQGLKNITAALRAVYMAENVVDGVAGLVDTLLDCVKRGKPTEADLACETLSVVIITCCANREDVLARLEEVLTPFING-CKSHTVVAASVRLFGIAVYVCGVEREHATQFLAFTERLFCSR------RIATVVR------AQALDSWCLVASTLSSERSTINREMIPRYLPV-LRALLEYPSLAVRTSAGRCIALLFGSRWVVAGSVLS-FEDEYDSASMEGQVGDLLEALSK---DRTRHRSKREKRRQRALFRDVYATFKTGHLPWTTIRVRQLVSELEGWANRVQAEDMKEALGQGWQPHVAENPFIRSVFHV 969
            E  +  +E+L  K   TR+ GL  + A     Y+ + V +    +++ L+ C+K+G  +E  LA    S+  I    + +++  +  + + P +    KS ++     +  GI  ++   +   +   +   E +F          I  V R      A AL SWCL+ ST+ +  +    ++I  Y P  +  L+E     +R  AG  IA+L+     +A  + S F D  +S         LL+ L K   +  +++ K+EKR QRA FR++Y +F+ G  P  TI+  + V E+  W  R+        LG G   H+ EN F+RSVF++
Sbjct:   68 EKLDSAIEELRNKDLKTREHGLCTLQALFSQKYLPDQVANRSENIIEQLISCLKKGNESEGKLAAIVTSLFFIQLGESNDELFQKFRDAIMPILRDETKSSSLRTRYAQTIGIVCFIGCEDIASSVDLMKSLEIIFSKSYVLKDGTIPIVTRDLQELHAAALSSWCLLVSTMPNNHA---HDLIRIYAPEKIPGLIESSDADLRNQAGETIAVLYE----IARDINSVFADPPES---------LLKTLDKKANESVKYKGKKEKRLQRATFREIYNSFEEGTSPEFTIKFGREVLEITSWTGRLYYNGFSNLLGTGMNVHLKENGFLRSVFNL 385          
BLAST of mRNA_S-firma_F_contig10077.149.1 vs. uniprot
Match: A0A817C5L6_9BILA (Hypothetical protein n=2 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817C5L6_9BILA)

HSP 1 Score: 110 bits (276), Expect = 9.590e-24
Identity = 89/340 (26.18%), Postives = 151/340 (44.41%), Query Frame = 1
Query:   22 EAFEEGMEQLAQKRYTTRQQGLKNITAALRAVYMAENVVDGVAGLVDTLLDCVKRGKPTEADLACETLSVVIITCCANREDVLARLEEVLTPFING-CKSHTVVAASVRLFGIAVYVCGVEREHATQFLAFTERLFCSRRI---ATV---------VRAQALDSWCLVASTLSSERSTINREMIPRYLPV-LRALLEYPSLAVRTSAGRCIALLFGSRWVVAGSVLS-FEDEYDSASMEGQVGDLLEALSK---DRTRHRSKREKRRQRALFRDVYATFKTGHLPWTTIRVRQLVSELEGWANRVQAEDMKEALGQGWQPHVAENPFIRSVFHVSGLLSD 987
            E  +  +E+L  K   TR+ GL  +       Y+ + V      +++ L+ CVK+G  +E  LA    S+  I      +D+  +  E + P +    +S ++  +  +  GI  ++   +   +   +   E +F    I    TV         +   AL SWC + ST+ +  +    ++I  Y P  +  L+E     +R  AG  IA+L+     +A  + S F D  +S         LL  L K   +  +++ K+EKR QRA FR++Y +F+ G  P  TI+  + V E+  W  R+        LG G   H+ EN F+RSVF++     D
Sbjct:   68 EKLDSALEELRNKDLKTREHGLHALQVLFSQKYLPDQVTARSENIIEQLIPCVKKGNESEGKLAAIVASLFCIQLGEPNDDLYVKFREAIMPILRDETQSSSLRTSYAQAIGIICFIASEDISSSVDLMKSLETIFAKSYINNDGTVPLVTRDLQELHTAALSSWCFLLSTMPNNHA---HDLIRIYTPEKIPGLIESSDSDLRNQAGETIAVLYE----IARDINSVFADPPES---------LLRTLDKKANESVKYKGKKEKRLQRATFREIYNSFEEGTSPEFTIKFGREVLEITSWTGRLYYNGFSNLLGTGMNVHLKENGFLRSVFNLDDATVD 391          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10077.149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W2H281_PHYPR2.240e-3330.65IFRD domain-containing protein n=7 Tax=Phytophthor... [more]
G4YTH2_PHYSP2.650e-3330.00IFRD domain-containing protein n=1 Tax=Phytophthor... [more]
A0A329RLF2_9STRA3.160e-3329.63IFRD domain-containing protein n=27 Tax=Phytophtho... [more]
H3HAU8_PHYRM9.920e-3328.35IFRD domain-containing protein n=1 Tax=Phytophthor... [more]
K3WKD3_GLOUD3.340e-3027.95IFRD domain-containing protein n=1 Tax=Globisporan... [more]
A0A3F2S3W2_9STRA1.160e-2928.13IFRD domain-containing protein n=1 Tax=Phytophthor... [more]
A0A0P1AJQ1_PLAHL8.260e-2727.80Interferon-related protein PC4 like n=1 Tax=Plasmo... [more]
A0A3M6VCB6_9STRA1.420e-2529.63IFRD domain-containing protein n=2 Tax=Peronospora... [more]
A0A818KAK6_9BILA6.980e-2426.65Hypothetical protein n=2 Tax=Rotaria sordida TaxID... [more]
A0A817C5L6_9BILA9.590e-2426.18Hypothetical protein n=2 Tax=Rotaria sp. Silwood2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10077contigS-firma_F_contig10077:3594..5046 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog4792.ETI49455
PFAMsIFRD
Max annot lvl4776|Peronosporales
Evalue1.86e-36
EggNOG OGsKOG2842@1|root,KOG2842@2759|Eukaryota,3Q7FJ@4776|Peronosporales
DescriptionInterferon-related developmental regulator (IFRD)
COG categoryZ
Hectar predicted targeting categoryother localisation
Exons4
Model size990
Cds size990
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10077.149.1prot_S-firma_F_contig10077.149.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10077 3594..5046 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815532.746875-CDS-S-firma_F_contig10077:3593..37761622815532.746875-CDS-S-firma_F_contig10077:3593..3776Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10077 3594..3776 -
1696949394.614395-CDS-S-firma_F_contig10077:3593..37761696949394.614395-CDS-S-firma_F_contig10077:3593..3776Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10077 3594..3776 -
1622815532.7585022-CDS-S-firma_F_contig10077:3828..39971622815532.7585022-CDS-S-firma_F_contig10077:3828..3997Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10077 3829..3997 -
1696949394.625688-CDS-S-firma_F_contig10077:3828..39971696949394.625688-CDS-S-firma_F_contig10077:3828..3997Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10077 3829..3997 -
1622815532.7718568-CDS-S-firma_F_contig10077:4351..46531622815532.7718568-CDS-S-firma_F_contig10077:4351..4653Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10077 4352..4653 -
1696949394.6348526-CDS-S-firma_F_contig10077:4351..46531696949394.6348526-CDS-S-firma_F_contig10077:4351..4653Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10077 4352..4653 -
1622815532.7821376-CDS-S-firma_F_contig10077:4710..50461622815532.7821376-CDS-S-firma_F_contig10077:4710..5046Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10077 4711..5046 -
1696949394.6461747-CDS-S-firma_F_contig10077:4710..50461696949394.6461747-CDS-S-firma_F_contig10077:4710..5046Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10077 4711..5046 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10077.149.1

>prot_S-firma_F_contig10077.149.1 ID=prot_S-firma_F_contig10077.149.1|Name=mRNA_S-firma_F_contig10077.149.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=330bp
MDRKAALEAFEEGMEQLAQKRYTTRQQGLKNITAALRAVYMAENVVDGVA
GLVDTLLDCVKRGKPTEADLACETLSVVIITCCANREDVLARLEEVLTPF
INGCKSHTVVAASVRLFGIAVYVCGVEREHATQFLAFTERLFCSRRIATV
VRAQALDSWCLVASTLSSERSTINREMIPRYLPVLRALLEYPSLAVRTSA
GRCIALLFGSRWVVAGSVLSFEDEYDSASMEGQVGDLLEALSKDRTRHRS
KREKRRQRALFRDVYATFKTGHLPWTTIRVRQLVSELEGWANRVQAEDMK
EALGQGWQPHVAENPFIRSVFHVSGLLSDR
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mRNA from alignment at S-firma_F_contig10077:3594..5046-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10077.149.1 ID=mRNA_S-firma_F_contig10077.149.1|Name=mRNA_S-firma_F_contig10077.149.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1453bp|location=Sequence derived from alignment at S-firma_F_contig10077:3594..5046- (Sphaerotrichia firma ET2_F female)
ATGGACCGCAAGGCGGCCCTGGAGGCGTTTGAGGAAGGCATGGAGCAGCT GGCTCAAAAGCGGTACACCACCCGCCAGCAGGGCCTGAAGAACATTACTG CTGCCCTCCGCGCCGTGTACATGGCCGAAAACGTCGTTGACGGCGTTGCT GGCCTGGTGGACACCCTGCTGGACTGTGTGAAGCGTGGTAAGCCCACGGA GGCGGACCTTGCTTGCGAAACCCTGTCCGTCGTCATTATCACGTGCTGCG CCAACCGTGAGGACGTCCTCGCGCGCCTGGAAGAAGTGCTGACGCCGTTC ATCAACGGCTGCAAGTCCCACACCGTGGTTGCAGCGGTGCGTTGCGTTGT GTGTGTTGTGTGTCCCCTCACACGCCTGCTGTCTGTTGAGCAGTCCGTGC GGCTGTTTGGAATCGCTGTCTACGTGTGCGGCGTCGAGCGGGAGCACGCC ACCCAGTTTTTGGCCTTCACGGAGCGCCTGTTTTGTTCGCGCCGCATTGC CACCGTGGTGCGGGCCCAGGCGCTGGATTCCTGGTGCCTGGTGGCCTCCA CCCTGTCCAGCGAGCGTTCCACCATTAACCGGGAAATGATTCCGCGCTAC CTCCCTGTGCTGCGAGCGTTGCTGGAGTACCCCAGCCTGGCCGTGCGGAC GTCCGCTGGCCGCTGCATTGCGCTGCTGTTTGGCAGCCGGTGGGTGTTTG TCCACGCAGACGCGGAGGACGGTGTGGCAGCCACGCCCGGCGACGCTGCC GCTCCAGAAGACGCCGGCGCCGCAGCCGCCGGCGCTGGTGCCGCCGACCC TGAGGCTGACGTCAAGGAAGACGACGGCGACAGCGGTGAGTTTTACGACT CGGATGACTGGGACTCCGGGGAGGAGGGTGGCTACGACCCGGATGCAGAC TTGGCGGACGCCCGCCCTGGGTCCCCGGACGCGTCTGACGACGAAGGCGA CGAGGCGGCGTCTGACGACGAGGACGACGGGTTGACTGAGTGGGACTGGC GGGCTGTGGTGGGGTTCGCGTCCGGTGCGGATGCGTCAGCGGGCCGCAGT GTCGCTGGCTCCGTGCTCTCTTTTGAGGACGAGTACGACAGCGCGTCCAT GGAGGGGCAGGTGGGCGACCTCCTGGAAGCCCTGTCCAAGGACCGCACCC GCCACCGAAGCAAGCGGGAGAAGCGCCGCCAGCGCGCCTTGTTCCGTGAC GTGTACGCCACGTTCAAGGTGTGTGTGGGTGGGTGTTTGCGTGTGTGCAC TGCCGTTACACGCCATGCAGACGGGACACTTGCCGTGGACAACCATCCGT GTGCGGCAGCTGGTTTCCGAGTTAGAGGGCTGGGCCAACCGGGTCCAGGC GGAAGACATGAAGGAAGCCCTTGGGCAGGGCTGGCAGCCCCACGTCGCGG AGAACCCCTTCATTCGATCCGTGTTCCACGTGTCCGGCTTGTTGTCAGAC CGC
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Coding sequence (CDS) from alignment at S-firma_F_contig10077:3594..5046-

>mRNA_S-firma_F_contig10077.149.1 ID=mRNA_S-firma_F_contig10077.149.1|Name=mRNA_S-firma_F_contig10077.149.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1980bp|location=Sequence derived from alignment at S-firma_F_contig10077:3594..5046- (Sphaerotrichia firma ET2_F female)
ATGGACCGCAAGGCGGCCCTGGAGGCGTTTGAGGAAGGCATGGAGCAGCT
GGCTCAAAAGCGGTACACCACCCGCCAGCAGGGCCTGAAGAACATTACTG
CTGCCCTCCGCGCCGTGTACATGGCCGAAAACGTCGTTGACGGCGTTGCT
GGCCTGGTGGACACCCTGCTGGACTGTGTGAAGCGTGGTAAGCCCACGGA
GGCGGACCTTGCTTGCGAAACCCTGTCCGTCGTCATTATCACGTGCTGCG
CCAACCGTGAGGACGTCCTCGCGCGCCTGGAAGAAGTGCTGACGCCGTTC
ATCAACGGCTGCAAGTCCCACACCGTGGTTGCAGCGATGGACCGCAAGGC
GGCCCTGGAGGCGTTTGAGGAAGGCATGGAGCAGCTGGCTCAAAAGCGGT
ACACCACCCGCCAGCAGGGCCTGAAGAACATTACTGCTGCCCTCCGCGCC
GTGTACATGGCCGAAAACGTCGTTGACGGCGTTGCTGGCCTGGTGGACAC
CCTGCTGGACTGTGTGAAGCGTGGTAAGCCCACGGAGGCGGACCTTGCTT
GCGAAACCCTGTCCGTCGTCATTATCACGTGCTGCGCCAACCGTGAGGAC
GTCCTCGCGCGCCTGGAAGAAGTGCTGACGCCGTTCATCAACGGCTGCAA
GTCCCACACCGTGGTTGCAGCGTCCGTGCGGCTGTTTGGAATCGCTGTCT
ACGTGTGCGGCGTCGAGCGGGAGCACGCCACCCAGTTTTTGGCCTTCACG
GAGCGCCTGTTTTGTTCGCGCCGCATTGCCACCGTGGTGCGGGCCCAGGC
GCTGGATTCCTGGTGCCTGGTGGCCTCCACCCTGTCCAGCGAGCGTTCCA
CCATTAACCGGGAAATGATTCCGCGCTACCTCCCTGTGCTGCGAGCGTTG
CTGGAGTACCCCAGCCTGGCCGTGCGGACGTCCGCTGGCCGCTGCATTGC
GCTGCTGTTTGGCAGCCGGTGGGTTCCGTGCGGCTGTTTGGAATCGCTGT
CTACGTGTGCGGCGTCGAGCGGGAGCACGCCACCCAGTTTTTGGCCTTCA
CGGAGCGCCTGTTTTGTTCGCGCCGCATTGCCACCGTGGTGCGGGCCCAG
GCGCTGGATTCCTGGTGCCTGGTGGCCTCCACCCTGTCCAGCGAGCGTTC
CACCATTAACCGGGAAATGATTCCGCGCTACCTCCCTGTGCTGCGAGCGT
TGCTGGAGTACCCCAGCCTGGCCGTGCGGACGTCCGCTGGCCGCTGCATT
GCGCTGCTGTTTGGCAGCCGGTGGGTTGTCGCTGGCTCCGTGCTCTCTTT
TGAGGACGAGTACGACAGCGCGTCCATGGAGGGGCAGGTGGGCGACCTCC
TGGAAGCCCTGTCCAAGGACCGCACCCGCCACCGAAGCAAGCGGGAGAAG
CGCCGCCAGCGCGCCTTGTTCCGTGACGTGTACGCCACGTTCAAGTGTCG
CTGGCTCCGTGCTCTCTTTTGAGGACGAGTACGACAGCGCGTCCATGGAG
GGGCAGGTGGGCGACCTCCTGGAAGCCCTGTCCAAGGACCGCACCCGCCA
CCGAAGCAAGCGGGAGAAGCGCCGCCAGCGCGCCTTGTTCCGTGACGTGT
ACGCCACGTTCAAGACGGGACACTTGCCGTGGACAACCATCCGTGTGCGG
CAGCTGGTTTCCGAGTTAGAGGGCTGGGCCAACCGGGTCCAGGCGGAAGA
CATGAAGGAAGCCCTTGGGCAGGGCTGGCAGCCCCACGTCGCGGAGAACC
CCTTCATTCGATCCGTGTTCCACGTGTCCGGCTTGTTGTCAGACCGCACG
GGACACTTGCCGTGGACAACCATCCGTGTGCGGCAGCTGGTTTCCGAGTT
AGAGGGCTGGGCCAACCGGGTCCAGGCGGAAGACATGAAGGAAGCCCTTG
GGCAGGGCTGGCAGCCCCACGTCGCGGAGAACCCCTTCATTCGATCCGTG
TTCCACGTGTCCGGCTTGTTGTCAGACCGC
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