prot_S-firma_F_contig10973.1286.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10973.1286.1
Unique Nameprot_S-firma_F_contig10973.1286.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length130
Homology
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BLAST of mRNA_S-firma_F_contig10973.1286.1 vs. uniprot
Match: D7FPW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPW0_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 1.080e-22
Identity = 63/131 (48.09%), Postives = 77/131 (58.78%), Query Frame = 0 
Query:    1 MGAGLAAQRGWPQGQENEPLSPHSTEGATSSGEEHSTGQQEREHGGVGNDLLLYEEVART-EVQPLEDGDYARNYGSSASLTNLVPLDRRRSTIVEEDGETQQAGSASLLQNDWDSVPGQNEPLEQRDGRE 130
            MGAGLAAQRGWPQGQE++P SP  T    +                  + LLL+EE A T EVQPLED D+ARNYGSSASL +LVPLDR+R + +E +      GS S           +++ LE RDGRE
Sbjct:    1 MGAGLAAQRGWPQGQEDDPSSPQRT---GTXXXXXXXXXXXXXXXSRRSSLLLFEETADTSEVQPLEDSDFARNYGSSASLASLVPLDRKRWSSIEAENGNASVGSGSA------GDAAEDDHLEARDGRE 122
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10973.1286.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FPW0_ECTSI1.080e-2248.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10973contigS-firma_F_contig10973:220..609 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10973.1286.1mRNA_S-firma_F_contig10973.1286.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10973 220..609 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10973.1286.1 ID=prot_S-firma_F_contig10973.1286.1|Name=mRNA_S-firma_F_contig10973.1286.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=130bp
MGAGLAAQRGWPQGQENEPLSPHSTEGATSSGEEHSTGQQEREHGGVGND
LLLYEEVARTEVQPLEDGDYARNYGSSASLTNLVPLDRRRSTIVEEDGET
QQAGSASLLQNDWDSVPGQNEPLEQRDGRE
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