mRNA_S-firma_F_contig10930.1235.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10930.1235.1 vs. uniprot
Match: D7G3L5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3L5_ECTSI) HSP 1 Score: 465 bits (1197), Expect = 1.490e-148 Identity = 242/266 (90.98%), Postives = 255/266 (95.86%), Query Frame = 1
Query: 1 PDLAHCFELHSGKLLGDKRNREGRLYFKASSEEELYAWMVPLRILVGSHNLVRTGAAGSMCYVDVARRAELVNTRNRAGETPLHYSAKGEGRAERDTIGRVQIATWLVENGADVNAADRGGSTALHVAVKRGHVPXXXXXXXXXXXXXXXXXXXXSPLDLVKREQDVQDIAVGHFKAAERSPMLAPPVKLSSLTYLSFNLERLVMHSTADLQSPFITVSVHDSRGRRVEAAQDASAPVVRRPNYLWWAASYHMQNPVENLEPGTRL 798
PDLAHCFELHSGKLLGDKRNREGRLYFKA SEEELY+WMVPLR+LVGSHNLVRTGAAGSMCYVDVARR ELVN RNRAGETPLHYSAKGEG+AERD IGRVQIATWLVENG++VNAAD+GGSTALHVAV+RGHVP XXXXXXXXXXXXXXX SPL+LV R+QDV+DIAVGHFKAAERSPMLAPPVKLSSLTYLSF+LERLVMHSTADLQSPFITVSVHDSRGRRVEAAQDASAPVVRRP+YLWW+ SYHMQNPVENLEPGTRL
Sbjct: 1493 PDLAHCFELHSGKLLGDKRNREGRLYFKALSEEELYSWMVPLRVLVGSHNLVRTGAAGSMCYVDVARRVELVNMRNRAGETPLHYSAKGEGKAERDAIGRVQIATWLVENGSEVNAADKGGSTALHVAVRRGHVPLAAXXXXXXXXXXXXXXXGRSPLELVNRDQDVEDIAVGHFKAAERSPMLAPPVKLSSLTYLSFHLERLVMHSTADLQSPFITVSVHDSRGRRVEAAQDASAPVVRRPSYLWWSTSYHMQNPVENLEPGTRL 1758
BLAST of mRNA_S-firma_F_contig10930.1235.1 vs. uniprot
Match: A0A836CBL8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBL8_9STRA) HSP 1 Score: 262 bits (669), Expect = 2.500e-76 Identity = 131/268 (48.88%), Postives = 175/268 (65.30%), Query Frame = 1
Query: 16 CFELHSGKLLGDKRNREGRLYFKASS------EEELYAWMVPLRILVGSHNLVRTGAAGSMCYVDVARRAELVNTRNRAGETPLHYSAK----GEGRAERDTIGRVQIATWLVENGADVNAADRGGSTALHVAVKRGHVPXXXXXXXXXXXXXXXXXXXXSPLDLVKREQDVQDIAVGHFKAAERSPMLAPPVKLSSLTYLSFNLERLVMHSTADLQSPFITVSVHDSRGRRVEAAQDASAPVVRRPNYLWWAASYHMQNPVENLEPG 789
CF ++S +LL KRN+EGRLYFKA+S E+ YAW+VPLR+L HNL + A G YVD RR ELV N+ ETPLH++A+ G+ AE + RVQI +WLVENGA++NAA G T LH A+ GH+ S LDL++R +D++ +AVG +KAA+ +P+L PP +L LTYL+F++E+L M ST L +PF+TVSVHD+ G+R+E QD +APVV RP YLWW A++HMQNP+ENL G
Sbjct: 1226 CFAIYSQELLRSKRNKEGRLYFKATSGKFFESSEDAYAWLVPLRVLCKDHNLGVSQAQGITRYVDPERRRELVRALNKYHETPLHFAARSSDTGDTGAESQAVARVQIGSWLVENGAEINAASVSGETPLHAAIAHGHLALAAALARRGGDLSLKTRAGTSCLDLLQRPEDLEHVAVGFYKAADLNPLLPPPSRLKGLTYLTFHVEKLNMQSTERLSAPFLTVSVHDAAGKRLEKPQDVNAPVVSRPTYLWWGANWHMQNPMENLGQG 1493
BLAST of mRNA_S-firma_F_contig10930.1235.1 vs. uniprot
Match: A0A835ZQ73_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ73_9STRA) HSP 1 Score: 197 bits (501), Expect = 8.650e-54 Identity = 120/296 (40.54%), Postives = 158/296 (53.38%), Query Frame = 1
Query: 16 CFELHSGKLLGDKRNREGRLYFKASSEEELYAWMVPLRILVGSHNLVRTGAAGSMCYVDVARRAELVNTRNRAGETPLHYSAKG---EGRAERD----TIGRVQ-----------------------------IATWLVENGADVNAADRGGSTALHVAVKRGHVPXXXXXXXXXXXXXXXXXXXX-SPLDLVKREQDVQDIAVGHFKAAERSPMLAPPVKLSSLTYLSFNLERLVMHSTADLQSPFITVSVHDSRGRRVEAAQDASAPVVRRPNYLWWAASYHMQNPVENLEPGT 792
FELH+ LL DK+NREGRLYF+A +E L WMVPLR++VG + M ++D+A R LV NRAGETPLH +A+ E A R + +V+ +A WLVENGAD NA DR G+TALH A + + S +D+VK E+++ + HF ER+P+LAPP KL TYLS LER M ST L SPF++VSV++ +G+ EA QD P + RP YLWWA ++HMQNP+E L G+
Sbjct: 1424 AFELHTPDLL-DKKNREGRLYFQAETEGSLQTWMVPLRMVVGLYQFRHDKRREPMEFLDLAGRRALVRVTNRAGETPLHLAARAREPEAAAARPGGPVAVQQVRQLAAHTCCQLPAREPAXXXXXXXXXXXXXVAAWLVENGADPNAQDRRGATALHDAAEHCNAAAAAVLAWKGGDLSLARPADGKSVVDIVKGERELALLMQKHFHPTERAPLLAPPEKLFGFTYLSLLLERTTMASTDALVSPFLSVSVYNGKGQLSEAQQDVVFPCLTRPGYLWWAQTWHMQNPLETLGAGS 1718
BLAST of mRNA_S-firma_F_contig10930.1235.1 vs. uniprot
Match: A0A7R9YEI3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEI3_9STRA) HSP 1 Score: 145 bits (366), Expect = 8.550e-36 Identity = 104/264 (39.39%), Postives = 153/264 (57.95%), Query Frame = 1
Query: 19 FELHSGKLLGDKRNREGRLYFKASSEEELYAWMVPLRILVGSHNLVRTGAAGS-----MCYVDVARRAELVNTRNRAGETPLHYSAK----GEGRAERDTIGRVQIATWLVENGADVNAADRGGSTALHVAVKRGHVPXXXXXXXXXXXXXXXXXXXXSPLDLVKREQDVQDIAVGHFKAAERSPMLAPPVKLSSLTYLSFNLERLVMHSTADLQSPFITVSVHDSRGRRVEAAQDASAPVVRRPNYLWWAASYHMQNPVENLE 783
FE+HS LL D+RNREGR+YFKASSE EL AW+ PLR+++ S GS M Y+D R ++++ ++ AG + LH +A + +E VQ+A WLVENG + + AD+ G LH+A ++ XXXXXXXXXXXXXXXX +L+ +++ + I +R + PV + LTY+S +M T++L PF+T++V +SRG VE AQ S + R Y++W ++HMQ +ENL+
Sbjct: 699 FEIHSPLLL-DRRNREGRIYFKASSEIELQAWLAPLRVVLAS-------CGGSIQQREMFYIDAELRKKILSVKDGAGRSLLHRAADVMKPSQEASEVFNSRLVQLACWLVENGCNPDQADQRGCAPLHIATSACNLEFAAGXXXXXXXXXXXXXXXXXXXELLPQDK-LGRIMTRGLNKTKRDALKPRPVNIPDLTYVSVYFAAHMMAHTSELNEPFLTITVRNSRGHDVEEAQSMSGTALEREEYVYWGQTWHMQTALENLD 953
BLAST of mRNA_S-firma_F_contig10930.1235.1 vs. uniprot
Match: W7TRG2_9STRA (Myosin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRG2_9STRA) HSP 1 Score: 139 bits (349), Expect = 1.800e-33 Identity = 95/303 (31.35%), Postives = 148/303 (48.84%), Query Frame = 1
Query: 16 CFELHSGKLLGDKRNREGRLYFKASSEEELYAWMVPLRILVGSHNLVRTGAAGSMCYVDVARRAELVNTRNRAGETPLH---YSAKGEGRAERDTIGR--VQIATWLVENGADVNAADRGGSTALH---------------------------VAVKRGHVPXXXXXXXXXXXXXXXXXXXXS--------PLDLV--KREQDVQDIAVGHFKAAERSPMLAPPVKLSSLTYLSFNLERLVMHSTAD--LQSPFITVSVHDSRGRRVEAAQDASAPVVRRPNYLWWAASYHMQNPVENLEPGT 792
CFE+HS LL D+RNREGRLYF+A SE EL AW+ LR+++G + + + YV+ R +L+ N AGETPLH +S + + R +R I VQ+A W+++NGADVNA D G+T H VA+ P + +DL+ R++ + + G K + + PP +L + +Y+SF +E+L M T+ +P+I +SV ++ VE AQ + P + + +WW +++MQ PVE+L PG+
Sbjct: 1634 CFEIHSPLLL-DRRNREGRLYFQAESEMELQAWLAKLRMVMGQTTHMYGRRSSPIQYVNSELRKKLMLCTNEAGETPLHALIFSLESKDR-KRSGIQPLVVQLAMWMIDNGADVNAQDLNGNTVAHRAALIGAGDSQRGVGGVGRRGRRAMKEVAMTAAVAPENKDTAFRLIAALAQKGANLTLRNKSNQTVVDLMAESRQEGTKLMGPGQVKMSADRTLFPPPFRLPACSYVSFFVEKLAMAETSQEKFPAPYIKISVFSAKQHLVERAQIITYPALVKGRSMWWGWTWNMQTPVEHLSPGS 1934
BLAST of mRNA_S-firma_F_contig10930.1235.1 vs. uniprot
Match: A0A2D4BGA5_PYTIN (Myosin-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BGA5_PYTIN) HSP 1 Score: 136 bits (342), Expect = 1.530e-32 Identity = 95/263 (36.12%), Postives = 145/263 (55.13%), Query Frame = 1
Query: 13 HCFELHSGKLLGDKRNREGRLYFKASSEEELYAWMVPLRILVGSHNLVRTGAAGSMCYVDVARRAELVNTRNRAGETPLHYSAKGEGRAERDTIGRVQIATWLVENGADVNAADRGGSTALHVAVKRGHVPXXXXXXXXXXXXXXXXXXXXSPLDLVKREQDVQDIAVGHFKAAE---RSPMLAPPVKLSSLTYLSFNLERLVMHSTADLQSPFITVSVHDSRGRRVEAAQDASAPVVRRP-NYLWWAASYHMQNPVENLEPG 789
+CFE+HS +L K N EG + F A +E+E++ WM +R + G + +M VD + R E VN +N+AG TPLH + + E + + ++ WL+ENGAD NAAD G T LH AV XXXXXXXXXXXXS +D+ E D++++ V A + R P+L PP +L+ TY+S L + + + +Q+P + V D + VE AQ +++ NY W+ S+++Q P+E+L+ G
Sbjct: 1658 NCFEIHSPRLKSSK-NPEGMMSFVADTEQEVHEWMAAIRKVHGVRIATMSPPFQNMICVDTSLRREYVNMKNKAGFTPLHLAVQNE---DDEGFEAAKVCVWLIENGADPNAADANGDTPLHYAVMLNRYDLVETLMKKXXXXXXXXXXXXSSIDIAI-EDDMKELLVPEVHACKDPTRLPLLKPPTRLADSTYVSVFLGAVAVATGPIMQTPHFNLYVLDYKKSVVETAQQTPNSLIQAGGNYWWFGNSWYLQTPLEHLKDG 1915
BLAST of mRNA_S-firma_F_contig10930.1235.1 vs. uniprot
Match: A0A5D6XMP3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMP3_9STRA) HSP 1 Score: 129 bits (325), Expect = 2.710e-30 Identity = 86/288 (29.86%), Postives = 134/288 (46.53%), Query Frame = 1
Query: 13 HCFELHSGKLLGDKRNREGRLYFKASSEEELYAWMVPLRILVGSHNLVRTGAAGSMCYVDVARRAELVNTRNRAGETPLHYSAKGEGRAERDTIGRVQIATWLVENGADVNAADRGGSTALHVAVKRGHVPXXXXXXXXXXXXXXXXXXXXSPLDLVKRE--QDVQDIAVGHFKAAER--------------------------SPMLAPPVKLSSLTYLSFNLERLVMHSTADLQSPFITVSVHDSRGRRVEAAQDASAPVVRRP-NYLWWAASYHMQNPVENLEPG 789
+CFE+HS +L K N EG L F A SE+E++ WM +R + G + +M +D A R E VN N+ G TPLH + + E E + +++ WL+ENGADVNA D G TALH AV SP D+ + +++ D AV AE +P+ P +L+ TY+S L + + + +++P + V D++G VEAAQ +++ NY W+ S+++Q P+E+L+ G
Sbjct: 1160 NCFEIHSPRLKSSK-NPEGVLSFVADSEDEVHEWMAAIRKVRGVRVKTSSPPFQNMICIDTALRREYVNMANKLGFTPLHVAVQNE---EDEGFEAAKVSVWLIENGADVNAVDANGDTALHYAVMLNRFDLVETLMKRGADPTVRNAKGLSPADIAPEDDIREILDPAVHAADVAEEEAAMVAAEQHAPQHGHPPANAPQRRSAPLRKSPARLADSTYVSVFLGAVAVATGPIMETPHFNLYVLDAKGAVVEAAQRTPKSLIQAGGNYWWFGNSWYLQTPLEHLKDG 1443
BLAST of mRNA_S-firma_F_contig10930.1235.1 vs. uniprot
Match: A0A3M6VTL4_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VTL4_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.240e-25 Identity = 76/288 (26.39%), Postives = 134/288 (46.53%), Query Frame = 1
Query: 4 DLAHCFELHSGKLLGDKRNREGRLYFKASSEEELYAWMVPLRILVGSHNLVRTGAAGSMCYVDVARRAELVNTRNRAGETPLHYSAKGEGRAERDTIGRVQIATWLVENGADVNAADRGGSTALHVAVKRGHVPXXXXXXXXXXXXXXXXXXXXSPLDLVKREQDVQDIA--VGHFKAAERSP-----------------------MLAPPVKLSSLTYLSFNLERLVMHSTADLQSPFITVSVHDSRGRRVEAAQDASAPVVRRP-NYLWWAASYHMQNPVENLEPG 789
D+ CFE+ S +L K N +G L F A +E+E++ WM+ +R + G + +M +D R + VN +N+ G TPLH + + E + ++ WL+ENGAD NA D G TALH AV+ S +++ + E D+++I V H E+ P ++ PP +L TY+S L + + + +++P + + DS+G ++ AQ +++ NY W+ ++++Q P+E+L+ G
Sbjct: 1511 DVDCCFEIRSPRLKSSK-NPDGMLSFVADTEQEVHEWMLAIRKVQGVRVTTTSPPNHNMICIDSGLRRDYVNMKNKLGFTPLHLVVQND---EDEGFEAAKVCVWLIENGADPNAIDENGDTALHYAVELDRYDLVETLMKRGADSSIKNLKGLSAMEIAE-EDDLKEILSPVKHTLKVEKVPVDDDEPQADGIDPAKEMTPIASSLVPPPDRLRDSTYVSVFLGAVAVATGPVMETPHFNLYIMDSKGAIIDTAQRTPKSLIQTGGNYWWFGNTWYLQTPLEHLKDG 1793
BLAST of mRNA_S-firma_F_contig10930.1235.1 vs. uniprot
Match: H3GCD5_PHYRM (Uncharacterized protein n=19 Tax=Phytophthora TaxID=4783 RepID=H3GCD5_PHYRM) HSP 1 Score: 114 bits (284), Expect = 7.720e-25 Identity = 74/288 (25.69%), Postives = 133/288 (46.18%), Query Frame = 1
Query: 4 DLAHCFELHSGKLLGDKRNREGRLYFKASSEEELYAWMVPLRILVGSHNLVRTGAAGSMCYVDVARRAELVNTRNRAGETPLHYSAKGEGRAERDTIGRVQIATWLVENGADVNAADRGGSTALHVAVKRGHVPXXXXXXXXXXXXXXXXXXXXSPLDLVKREQDVQDIA--VGHFKAAERSP-----------------------MLAPPVKLSSLTYLSFNLERLVMHSTADLQSPFITVSVHDSRGRRVEAAQDASAPVVRRP-NYLWWAASYHMQNPVENLEPG 789
D+ CFE+ S +L K N +G + F A +E+E++ WM+ +R + G + +M +D R + VN +N+ G TPLH + + + E + ++ WL+ENGAD NA D G TALH AV+ S +++ + E D+++I H E +P ++ PP +L TY+S L + + + +++P + + D +G V+ AQ +++ NY W+ ++++Q P+E+L+ G
Sbjct: 1489 DVDCCFEIRSPRLKSSK-NPDGMMSFVADTEQEVHQWMLAIRKVQGVRVTTTSPPNHNMICIDSGLRRDYVNMKNKLGFTPLHLTVQND---EDEGFEAAKVCVWLIENGADPNAIDENGDTALHYAVELERYDLVETLMKRGADSSIKNLKGLSAMEIAE-EDDLKEILNPAKHILKVEETPVEPEEPQADGIVPVKKLAQITPSLVPPPDRLHDSTYVSVFLGAVAVATGPIMETPHFNLYIMDYKGAVVDTAQRTPKSLIQTGGNYWWFGNTWYLQTPLEHLKDG 1771
BLAST of mRNA_S-firma_F_contig10930.1235.1 vs. uniprot
Match: A0A484E7A1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7A1_BRELC) HSP 1 Score: 114 bits (284), Expect = 7.740e-25 Identity = 76/289 (26.30%), Postives = 132/289 (45.67%), Query Frame = 1
Query: 4 DLAHCFELHSGKLLGDKRNREGRLYFKASSEEELYAWMVPLRILVGSHNLVRTGAAGSMCYVDVARRAELVNTRNRAGETPLHYSAKGEGRAERDTIGRVQIATWLVENGADVNAADRGGSTALHVAVKRGHVPXXXXXXXXXXXXXXXXXXXXSPLDLVKREQDVQDIAVGH-------FKAAERSPM----------------LAPPVKLSSLTYLSFNLERLVMHSTADLQSPFITVSVHDSRGRRVEAAQDASAPVVRRP-NYLWWAASYHMQNPVENLEPGTRL 798
D+ CF++ S +L RN +G L F A SE+ ++ WM+ +R + G + +M +D R E V+ +N+ G TPLH + + + E + V+ WL+ENGAD NA D G TALH AV+ S L++ + E ++ ++ + F A P+ L PP +L TY+S L + + + +++P + + D RG ++ AQ +++ NY W+ ++++Q P+E+L+ G L
Sbjct: 1510 DVDFCFKIQSPRLKSS-RNIDGTLSFGADSEKVVHEWMLAIRKVHGVRVVTTNPPNHNMICIDTGLRREYVSMQNKLGFTPLHLAVQND---EDEGFEAVKACVWLIENGADPNAIDVNGDTALHYAVELERFDLVETLMKRGANSSIKNLKGLSALEIAEDEDLIKILSASYNAFGVEEFSAVSGLPLADGLEPLKLTSLTSSLLPPPERLHDSTYVSVFLGAIAVATGPIMETPHYKLYIMDCRGAVIDTAQRTPTSLIQTGGNYWWFGNTWYLQTPLEHLKDGKTL 1794 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10930.1235.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10930.1235.1 >prot_S-firma_F_contig10930.1235.1 ID=prot_S-firma_F_contig10930.1235.1|Name=mRNA_S-firma_F_contig10930.1235.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=266bp PDLAHCFELHSGKLLGDKRNREGRLYFKASSEEELYAWMVPLRILVGSHNback to top mRNA from alignment at S-firma_F_contig10930:1184..4548+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10930.1235.1 ID=mRNA_S-firma_F_contig10930.1235.1|Name=mRNA_S-firma_F_contig10930.1235.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3365bp|location=Sequence derived from alignment at S-firma_F_contig10930:1184..4548+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10930:1184..4548+ >mRNA_S-firma_F_contig10930.1235.1 ID=mRNA_S-firma_F_contig10930.1235.1|Name=mRNA_S-firma_F_contig10930.1235.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1596bp|location=Sequence derived from alignment at S-firma_F_contig10930:1184..4548+ (Sphaerotrichia firma ET2_F female)back to top |